ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd27d09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_474399.1| Oryza sativa (japonica cultivar-group), predic... 371 2e-99
2dbj|AK121846.1| Oryza sativa (japonica cultivar-group) cDNA clon... 371 2e-99
3dbj|AK068406.1| Oryza sativa (japonica cultivar-group) cDNA clon... 371 2e-99
4gb|AY108304.1| Zea mays PCO072828 mRNA sequence 297 3e-77
5dbj|AK103142.1| Oryza sativa (japonica cultivar-group) cDNA clon... 222 1e-54
6emb|AL606641.3|OSJN00074 Oryza sativa genomic DNA, chromosome 4,... 206 7e-50
7dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 206 7e-50
8emb|AL732352.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 206 7e-50
9gb|AC123899.15| Medicago truncatula clone mth2-33n6, complete se... 119 1e-23
10gb|AC148817.3| Medicago truncatula chromosome 7 BAC clone mth2-2... 119 1e-23
11ref|NM_116288.2| Arabidopsis thaliana KEA2; potassium:hydrogen a... 101 3e-18
12dbj|AP006402.1| Lotus japonicus genomic DNA, chromosome 1, clone... 86 2e-13
13emb|AL161472.2|ATCHRIV2 Arabidopsis thaliana DNA chromosome 4, c... 72 3e-09
14gb|AF058919.2|F6N23 Arabidopsis thaliana BAC F6N23 72 3e-09
15ref|NM_100062.2| Arabidopsis thaliana KEA1 (K EFFLUX ANTIPORTER ... 62 3e-06
16gb|AF003382.1|AF003382 Arabidopsis thaliana K efflux antiporter ... 62 3e-06
17gb|AC146097.4| Pan troglodytes BAC clone RP43-50K16 from 7, comp... 46 0.16
18gb|AC087070.2|AC087070 Homo sapiens chromosome 7 clone RP11-100L... 46 0.16
19gb|AC102603.11| Mus musculus chromosome 14, clone RP23-385I17, c... 44 0.64
20gb|M25090.1|RABUTERG1 Oryctolagus cuniculus uteroglobin (UGL) ge... 44 0.64
21gb|AC170600.2| Mus musculus BAC clone RP23-300L16 from chromosom... 44 0.64
22emb|X01423.1|OCUTGLOB Rabbit uteroglobin gene 44 0.64
23gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 42 2.5
24ref|XM_428870.1| PREDICTED: Gallus gallus LOC431319 (LOC431319),... 42 2.5
25gb|AC161287.2| Pan troglodytes BAC clone CH251-267A11 from chrom... 42 2.5
26gb|AC002456.2| Homo sapiens BAC clone CTB-13L3 from 7, complete ... 42 2.5
27emb|AL353663.10| Human DNA sequence from clone RP5-1007B16 on ch... 42 2.5
28emb|BX908798.1| Parachlamydia-related symbiont UWE25, complete g... 42 2.5
29gb|AC016178.9| Homo sapiens chromosome 8, clone RP11-259L23, com... 42 2.5
30emb|CR406592.1| Gallus gallus finished cDNA, clone ChEST657j15 42 2.5
31gb|AC009273.2|T1N6 Sequence of BAC T1N6 from Arabidopsis thalian... 42 2.5
32dbj|AP001875.3| Homo sapiens genomic DNA, chromosome 11q, clone:... 42 2.5

>ref|XM_474399.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3465

 Score =  371 bits (187), Expect = 2e-99
 Identities = 304/343 (88%)
 Strand = Plus / Minus

                                                                        
Query: 390  gacatgactcgagagaagccatagcccagggagctcccacttgtagaacaaagctccgtg 449
            ||||||||||  ||| | || |||||||| || || |||||||||| ||| | ||| |||
Sbjct: 3395 gacatgactctcgagtatccgtagcccagagaacttccacttgtagcacataactctgtg 3336

                                                                        
Query: 450  agttctgacaaatgacgattcctgaactcgttgatcgttgttgcaatctcagacattgga 509
            || ||||||| |||||| ||||||||||| ||||  |||| ||||||||| |||||||| 
Sbjct: 3335 agctctgacagatgacggttcctgaactcattgacagttgctgcaatctctgacattggg 3276

                                                                        
Query: 510  agttttgcttgagcaagaacagcagcagccaattggagacttggttctaaggtctcaggg 569
            |||||||| || |||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 3275 agttttgcctgtgcaagaacagcagcagccaactggagacttggttccaaggtctcaggg 3216

                                                                        
Query: 570  acaaccgctgatgcaccagctttctccaaattaacaccatgatcaacatcatgtgctctg 629
            |||||||||| |||||||||||||||||| |||||||||||||| |||||||| |||| |
Sbjct: 3215 acaaccgctgttgcaccagctttctccaagttaacaccatgatccacatcatgcgctcgg 3156

                                                                        
Query: 630  acaaatgtcttcacatttggaaagtatttgctcagagcccatacagctctataatttgca 689
            || |||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||
Sbjct: 3155 acgaatgtcttcacatttggaaaatatttgctcaaagcccagacagctctataatttgca 3096

                                                       
Query: 690  ccaggagtatctaaagtaatggcagcagcacatgccctctcag 732
            ||||| |||||||||||||| ||||| || || ||||||||||
Sbjct: 3095 ccaggggtatctaaagtaatagcagctgcgcaggccctctcag 3053



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>dbj|AK121846.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033101J11, full
            insert sequence
          Length = 4264

 Score =  371 bits (187), Expect = 2e-99
 Identities = 304/343 (88%)
 Strand = Plus / Minus

                                                                        
Query: 390  gacatgactcgagagaagccatagcccagggagctcccacttgtagaacaaagctccgtg 449
            ||||||||||  ||| | || |||||||| || || |||||||||| ||| | ||| |||
Sbjct: 3740 gacatgactctcgagtatccgtagcccagagaacttccacttgtagcacataactctgtg 3681

                                                                        
Query: 450  agttctgacaaatgacgattcctgaactcgttgatcgttgttgcaatctcagacattgga 509
            || ||||||| |||||| ||||||||||| ||||  |||| ||||||||| |||||||| 
Sbjct: 3680 agctctgacagatgacggttcctgaactcattgacagttgctgcaatctctgacattggg 3621

                                                                        
Query: 510  agttttgcttgagcaagaacagcagcagccaattggagacttggttctaaggtctcaggg 569
            |||||||| || |||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 3620 agttttgcctgtgcaagaacagcagcagccaactggagacttggttccaaggtctcaggg 3561

                                                                        
Query: 570  acaaccgctgatgcaccagctttctccaaattaacaccatgatcaacatcatgtgctctg 629
            |||||||||| |||||||||||||||||| |||||||||||||| |||||||| |||| |
Sbjct: 3560 acaaccgctgttgcaccagctttctccaagttaacaccatgatccacatcatgcgctcgg 3501

                                                                        
Query: 630  acaaatgtcttcacatttggaaagtatttgctcagagcccatacagctctataatttgca 689
            || |||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||
Sbjct: 3500 acgaatgtcttcacatttggaaaatatttgctcaaagcccagacagctctataatttgca 3441

                                                       
Query: 690  ccaggagtatctaaagtaatggcagcagcacatgccctctcag 732
            ||||| |||||||||||||| ||||| || || ||||||||||
Sbjct: 3440 ccaggggtatctaaagtaatagcagctgcgcaggccctctcag 3398



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>dbj|AK068406.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151M09, full
            insert sequence
          Length = 2581

 Score =  371 bits (187), Expect = 2e-99
 Identities = 304/343 (88%)
 Strand = Plus / Minus

                                                                        
Query: 390  gacatgactcgagagaagccatagcccagggagctcccacttgtagaacaaagctccgtg 449
            ||||||||||  ||| | || |||||||| || || |||||||||| ||| | ||| |||
Sbjct: 2029 gacatgactctcgagtatccgtagcccagagaacttccacttgtagcacataactctgtg 1970

                                                                        
Query: 450  agttctgacaaatgacgattcctgaactcgttgatcgttgttgcaatctcagacattgga 509
            || ||||||| |||||| ||||||||||| ||||  |||| ||||||||| |||||||| 
Sbjct: 1969 agctctgacagatgacggttcctgaactcattgacagttgctgcaatctctgacattggg 1910

                                                                        
Query: 510  agttttgcttgagcaagaacagcagcagccaattggagacttggttctaaggtctcaggg 569
            |||||||| || |||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 1909 agttttgcctgtgcaagaacagcagcagccaactggagacttggttccaaggtctcaggg 1850

                                                                        
Query: 570  acaaccgctgatgcaccagctttctccaaattaacaccatgatcaacatcatgtgctctg 629
            |||||||||| |||||||||||||||||| |||||||||||||| |||||||| |||| |
Sbjct: 1849 acaaccgctgttgcaccagctttctccaagttaacaccatgatccacatcatgcgctcgg 1790

                                                                        
Query: 630  acaaatgtcttcacatttggaaagtatttgctcagagcccatacagctctataatttgca 689
            || |||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||
Sbjct: 1789 acgaatgtcttcacatttggaaaatatttgctcaaagcccagacagctctataatttgca 1730

                                                       
Query: 690  ccaggagtatctaaagtaatggcagcagcacatgccctctcag 732
            ||||| |||||||||||||| ||||| || || ||||||||||
Sbjct: 1729 ccaggggtatctaaagtaatagcagctgcgcaggccctctcag 1687



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>gb|AY108304.1| Zea mays PCO072828 mRNA sequence
          Length = 879

 Score =  297 bits (150), Expect = 3e-77
 Identities = 242/270 (89%), Gaps = 2/270 (0%)
 Strand = Plus / Plus

                                                                       
Query: 453 tctgacaaatgacgattcctgaactcgttgat-cgttgttgcaatctcagacattggaag 511
           ||||||| ||||||||||| |||||||||||| | ||  || |||||| |||||||| ||
Sbjct: 365 tctgacagatgacgattccggaactcgttgatgctttcctg-aatctctgacattgggag 423

                                                                       
Query: 512 ttttgcttgagcaagaacagcagcagccaattggagacttggttctaaggtctcagggac 571
           ||||||||| ||||||||||||||||| |  || |||||||| || ||||||||||||||
Sbjct: 424 ttttgcttgtgcaagaacagcagcagctagctgaagacttggctccaaggtctcagggac 483

                                                                       
Query: 572 aaccgctgatgcaccagctttctccaaattaacaccatgatcaacatcatgtgctctgac 631
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 484 aaccgctgttgcaccagctttctccaaattaacaccatgatcaacatcatgtgctctaac 543

                                                                       
Query: 632 aaatgtcttcacatttggaaagtatttgctcagagcccatacagctctataatttgcacc 691
           |||||||||||||||||| || |||||| |||  ||||| ||||||||||| ||||||||
Sbjct: 544 aaatgtcttcacatttgggaaatatttgttcaatgcccagacagctctatagtttgcacc 603

                                         
Query: 692 aggagtatctaaagtaatggcagcagcaca 721
           ||| ||||| |||||||| |||||||||||
Sbjct: 604 aggggtatccaaagtaattgcagcagcaca 633



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>dbj|AK103142.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033120G14, full
            insert sequence
          Length = 1306

 Score =  222 bits (112), Expect = 1e-54
 Identities = 154/168 (91%)
 Strand = Plus / Minus

                                                                        
Query: 565  cagggacaaccgctgatgcaccagctttctccaaattaacaccatgatcaacatcatgtg 624
            ||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||| |
Sbjct: 1306 cagggacaaccgctgttgcaccagctttctccaagttaacaccatgatccacatcatgcg 1247

                                                                        
Query: 625  ctctgacaaatgtcttcacatttggaaagtatttgctcagagcccatacagctctataat 684
            ||| ||| |||||||||||||||||||| |||||||||| |||||| |||||||||||||
Sbjct: 1246 ctcggacgaatgtcttcacatttggaaaatatttgctcaaagcccagacagctctataat 1187

                                                            
Query: 685  ttgcaccaggagtatctaaagtaatggcagcagcacatgccctctcag 732
            |||||||||| |||||||||||||| ||||| || || ||||||||||
Sbjct: 1186 ttgcaccaggggtatctaaagtaatagcagctgcgcaggccctctcag 1139



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>emb|AL606641.3|OSJN00074 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0032F06,
              complete sequence
          Length = 148023

 Score =  206 bits (104), Expect = 7e-50
 Identities = 146/160 (91%)
 Strand = Plus / Plus

                                                                          
Query: 573    accgctgatgcaccagctttctccaaattaacaccatgatcaacatcatgtgctctgaca 632
              ||||||| |||||||||||||||||| |||||||||||||| |||||||| |||| ||| 
Sbjct: 103287 accgctgttgcaccagctttctccaagttaacaccatgatccacatcatgcgctcggacg 103346

                                                                          
Query: 633    aatgtcttcacatttggaaagtatttgctcagagcccatacagctctataatttgcacca 692
              |||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||||
Sbjct: 103347 aatgtcttcacatttggaaaatatttgctcaaagcccagacagctctataatttgcacca 103406

                                                      
Query: 693    ggagtatctaaagtaatggcagcagcacatgccctctcag 732
              || |||||||||||||| ||||| || || ||||||||||
Sbjct: 103407 ggggtatctaaagtaatagcagctgcgcaggccctctcag 103446



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 52/54 (96%)
 Strand = Plus / Plus

                                                                    
Query: 522    gcaagaacagcagcagccaattggagacttggttctaaggtctcagggacaacc 575
              |||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 102617 gcaagaacagcagcagccaactggagacttggttccaaggtctcagggacaacc 102670



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 70/81 (86%)
 Strand = Plus / Plus

                                                                          
Query: 437    acaaagctccgtgagttctgacaaatgacgattcctgaactcgttgatcgttgttgcaat 496
              ||||| ||| ||||| ||||||| |||||| ||||||||||| ||||  |||| ||||||
Sbjct: 102436 acaaacctctgtgagctctgacagatgacggttcctgaactcattgacagttgctgcaat 102495

                                   
Query: 497    ctcagacattggaagttttgc 517
              ||| |||||||| ||||||||
Sbjct: 102496 ctctgacattgggagttttgc 102516



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  206 bits (104), Expect = 7e-50
 Identities = 146/160 (91%)
 Strand = Plus / Plus

                                                                            
Query: 573      accgctgatgcaccagctttctccaaattaacaccatgatcaacatcatgtgctctgaca 632
                ||||||| |||||||||||||||||| |||||||||||||| |||||||| |||| ||| 
Sbjct: 34897174 accgctgttgcaccagctttctccaagttaacaccatgatccacatcatgcgctcggacg 34897233

                                                                            
Query: 633      aatgtcttcacatttggaaagtatttgctcagagcccatacagctctataatttgcacca 692
                |||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||||
Sbjct: 34897234 aatgtcttcacatttggaaaatatttgctcaaagcccagacagctctataatttgcacca 34897293

                                                        
Query: 693      ggagtatctaaagtaatggcagcagcacatgccctctcag 732
                || |||||||||||||| ||||| || || ||||||||||
Sbjct: 34897294 ggggtatctaaagtaatagcagctgcgcaggccctctcag 34897333



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 52/54 (96%)
 Strand = Plus / Plus

                                                                      
Query: 522      gcaagaacagcagcagccaattggagacttggttctaaggtctcagggacaacc 575
                |||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 34896504 gcaagaacagcagcagccaactggagacttggttccaaggtctcagggacaacc 34896557



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 70/81 (86%)
 Strand = Plus / Plus

                                                                            
Query: 437      acaaagctccgtgagttctgacaaatgacgattcctgaactcgttgatcgttgttgcaat 496
                ||||| ||| ||||| ||||||| |||||| ||||||||||| ||||  |||| ||||||
Sbjct: 34896323 acaaacctctgtgagctctgacagatgacggttcctgaactcattgacagttgctgcaat 34896382

                                     
Query: 497      ctcagacattggaagttttgc 517
                ||| |||||||| ||||||||
Sbjct: 34896383 ctctgacattgggagttttgc 34896403



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>emb|AL732352.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0124B04, complete
             sequence
          Length = 115564

 Score =  206 bits (104), Expect = 7e-50
 Identities = 146/160 (91%)
 Strand = Plus / Plus

                                                                         
Query: 573   accgctgatgcaccagctttctccaaattaacaccatgatcaacatcatgtgctctgaca 632
             ||||||| |||||||||||||||||| |||||||||||||| |||||||| |||| ||| 
Sbjct: 76613 accgctgttgcaccagctttctccaagttaacaccatgatccacatcatgcgctcggacg 76672

                                                                         
Query: 633   aatgtcttcacatttggaaagtatttgctcagagcccatacagctctataatttgcacca 692
             |||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||||
Sbjct: 76673 aatgtcttcacatttggaaaatatttgctcaaagcccagacagctctataatttgcacca 76732

                                                     
Query: 693   ggagtatctaaagtaatggcagcagcacatgccctctcag 732
             || |||||||||||||| ||||| || || ||||||||||
Sbjct: 76733 ggggtatctaaagtaatagcagctgcgcaggccctctcag 76772



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 52/54 (96%)
 Strand = Plus / Plus

                                                                   
Query: 522   gcaagaacagcagcagccaattggagacttggttctaaggtctcagggacaacc 575
             |||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 75943 gcaagaacagcagcagccaactggagacttggttccaaggtctcagggacaacc 75996



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 70/81 (86%)
 Strand = Plus / Plus

                                                                         
Query: 437   acaaagctccgtgagttctgacaaatgacgattcctgaactcgttgatcgttgttgcaat 496
             ||||| ||| ||||| ||||||| |||||| ||||||||||| ||||  |||| ||||||
Sbjct: 75762 acaaacctctgtgagctctgacagatgacggttcctgaactcattgacagttgctgcaat 75821

                                  
Query: 497   ctcagacattggaagttttgc 517
             ||| |||||||| ||||||||
Sbjct: 75822 ctctgacattgggagttttgc 75842



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>gb|AC123899.15| Medicago truncatula clone mth2-33n6, complete sequence
          Length = 127126

 Score =  119 bits (60), Expect = 1e-23
 Identities = 126/148 (85%)
 Strand = Plus / Minus

                                                                          
Query: 585    ccagctttctccaaattaacaccatgatcaacatcatgtgctctgacaaatgtcttcaca 644
              ||||| ||||| ||||| || ||||||||||| ||||| || |  ||||| |||||||||
Sbjct: 113720 ccagccttctctaaattcactccatgatcaacgtcatgggcgcgaacaaaagtcttcaca 113661

                                                                          
Query: 645    tttggaaagtatttgctcagagcccatacagctctataatttgcaccaggagtatctaaa 704
              ||||| ||||| || ||||||||||| || | |||||||||||| ||||| ||||||| |
Sbjct: 113660 tttgggaagtacttactcagagcccaaactgttctataatttgctccaggcgtatctaga 113601

                                          
Query: 705    gtaatggcagcagcacatgccctctcag 732
              ||||| || |||||||||||||| ||||
Sbjct: 113600 gtaatagctgcagcacatgccctttcag 113573



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>gb|AC148817.3| Medicago truncatula chromosome 7 BAC clone mth2-22c10, complete
            sequence
          Length = 123020

 Score =  119 bits (60), Expect = 1e-23
 Identities = 126/148 (85%)
 Strand = Plus / Minus

                                                                        
Query: 585  ccagctttctccaaattaacaccatgatcaacatcatgtgctctgacaaatgtcttcaca 644
            ||||| ||||| ||||| || ||||||||||| ||||| || |  ||||| |||||||||
Sbjct: 5917 ccagccttctctaaattcactccatgatcaacgtcatgggcgcgaacaaaagtcttcaca 5858

                                                                        
Query: 645  tttggaaagtatttgctcagagcccatacagctctataatttgcaccaggagtatctaaa 704
            ||||| ||||| || ||||||||||| || | |||||||||||| ||||| ||||||| |
Sbjct: 5857 tttgggaagtacttactcagagcccaaactgttctataatttgctccaggcgtatctaga 5798

                                        
Query: 705  gtaatggcagcagcacatgccctctcag 732
            ||||| || |||||||||||||| ||||
Sbjct: 5797 gtaatagctgcagcacatgccctttcag 5770



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>ref|NM_116288.2| Arabidopsis thaliana KEA2; potassium:hydrogen antiporter AT4G00630
            (KEA2) mRNA, complete cds
          Length = 1884

 Score =  101 bits (51), Expect = 3e-18
 Identities = 219/275 (79%)
 Strand = Plus / Minus

                                                                        
Query: 450  agttctgacaaatgacgattcctgaactcgttgatcgttgttgcaatctcagacattgga 509
            ||||| ||||| ||||||   ||||||||||||||||||||||| || || ||  | || 
Sbjct: 1751 agttcagacaagtgacgagatctgaactcgttgatcgttgttgctatttctgatgtaggt 1692

                                                                        
Query: 510  agttttgcttgagcaagaacagcagcagccaattggagacttggttctaaggtctcaggg 569
            | ||| || || |||||||||||||| || || || ||||||||||| |  |||||||| 
Sbjct: 1691 aatttggcctgtgcaagaacagcagctgctaactgaagacttggttccagcgtctcagga 1632

                                                                        
Query: 570  acaaccgctgatgcaccagctttctccaaattaacaccatgatcaacatcatgtgctctg 629
            ||||| || |  || || ||||| || | ||| | |||||||||||| |||||||| | |
Sbjct: 1631 acaacagcggtagcgccggctttttcaagattgagaccatgatcaacgtcatgtgcacgg 1572

                                                                        
Query: 630  acaaatgtcttcacatttggaaagtatttgctcagagcccatacagctctataatttgca 689
            ||||| || || ||||| || || |||||||| |||||||| |||   || |||||||| 
Sbjct: 1571 acaaaggttttgacattggggaaatatttgctaagagcccagacacacctgtaatttgct 1512

                                               
Query: 690  ccaggagtatctaaagtaatggcagcagcacatgc 724
            ||||| || ||||||| ||| || |||||||||||
Sbjct: 1511 ccaggtgtgtctaaagcaatagccgcagcacatgc 1477



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>dbj|AP006402.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT34J23, TM0284,
             complete sequence
          Length = 92675

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 106/127 (83%)
 Strand = Plus / Plus

                                                                         
Query: 606   ccatgatcaacatcatgtgctctgacaaatgtcttcacatttggaaagtatttgctcaga 665
             ||||||||||| ||||| || |  ||||| ||||||||||| || ||||| ||||| |||
Sbjct: 56792 ccatgatcaacgtcatgggcacgaacaaaagtcttcacattagggaagtacttgctaaga 56851

                                                                         
Query: 666   gcccatacagctctataatttgcaccaggagtatctaaagtaatggcagcagcacatgcc 725
             ||||| || | |||||||||||| || || ||||||| ||| || || ||||||||||||
Sbjct: 56852 gcccaaactgttctataatttgctcccggcgtatctagagttattgctgcagcacatgcc 56911

                    
Query: 726   ctctcag 732
             || ||||
Sbjct: 56912 ctttcag 56918



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>emb|AL161472.2|ATCHRIV2 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 2
          Length = 197975

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 99/120 (82%)
 Strand = Plus / Plus

                                                                         
Query: 605   accatgatcaacatcatgtgctctgacaaatgtcttcacatttggaaagtatttgctcag 664
             |||||||||||| |||||||| | |||||| || || ||||| || || |||||||| ||
Sbjct: 68879 accatgatcaacgtcatgtgcacggacaaaggttttgacattggggaaatatttgctaag 68938

                                                                         
Query: 665   agcccatacagctctataatttgcaccaggagtatctaaagtaatggcagcagcacatgc 724
             |||||| |||   || |||||||| ||||| || ||||||| ||| || |||||||||||
Sbjct: 68939 agcccagacacacctgtaatttgctccaggtgtgtctaaagcaatagccgcagcacatgc 68998



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                         
Query: 450   agttctgacaaatgacgattcctgaactcgttgatcgttgttgc 493
             ||||| ||||| ||||||   |||||||||||||||||||||||
Sbjct: 68548 agttcagacaagtgacgagatctgaactcgttgatcgttgttgc 68591



 Score = 44.1 bits (22), Expect = 0.64
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                   
Query: 522   gcaagaacagcagcagccaattggagacttggttctaaggtctcagggacaacc 575
             |||||||||||||| || || || ||||||||||| |  |||||||| ||||||
Sbjct: 68703 gcaagaacagcagctgctaactgaagacttggttccagcgtctcaggaacaacc 68756



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>gb|AF058919.2|F6N23 Arabidopsis thaliana BAC F6N23
          Length = 91849

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 99/120 (82%)
 Strand = Plus / Plus

                                                                         
Query: 605   accatgatcaacatcatgtgctctgacaaatgtcttcacatttggaaagtatttgctcag 664
             |||||||||||| |||||||| | |||||| || || ||||| || || |||||||| ||
Sbjct: 50005 accatgatcaacgtcatgtgcacggacaaaggttttgacattggggaaatatttgctaag 50064

                                                                         
Query: 665   agcccatacagctctataatttgcaccaggagtatctaaagtaatggcagcagcacatgc 724
             |||||| |||   || |||||||| ||||| || ||||||| ||| || |||||||||||
Sbjct: 50065 agcccagacacacctgtaatttgctccaggtgtgtctaaagcaatagccgcagcacatgc 50124



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                         
Query: 450   agttctgacaaatgacgattcctgaactcgttgatcgttgttgc 493
             ||||| ||||| ||||||   |||||||||||||||||||||||
Sbjct: 49674 agttcagacaagtgacgagatctgaactcgttgatcgttgttgc 49717



 Score = 44.1 bits (22), Expect = 0.64
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                   
Query: 522   gcaagaacagcagcagccaattggagacttggttctaaggtctcagggacaacc 575
             |||||||||||||| || || || ||||||||||| |  |||||||| ||||||
Sbjct: 49829 gcaagaacagcagctgctaactgaagacttggttccagcgtctcaggaacaacc 49882



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>ref|NM_100062.2| Arabidopsis thaliana KEA1 (K EFFLUX ANTIPORTER 1); potassium:hydrogen
            antiporter AT1G01790 (KEA1) mRNA, complete cds
          Length = 2385

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 142/179 (79%)
 Strand = Plus / Minus

                                                                        
Query: 441  agctccgtgagttctgacaaatgacgattcctgaactcgttgatcgttgttgcaatctca 500
            ||||| || ||||| ||||| |||||  | ||||||||||| |||||  ||||||| || 
Sbjct: 2044 agctcggtcagttcagacaagtgacgggttctgaactcgttaatcgtgtttgcaatttcc 1985

                                                                        
Query: 501  gacattggaagttttgcttgagcaagaacagcagcagccaattggagacttggttctaag 560
            ||  | || | |||||| ||||||||||||||||| ||||| || ||||| || || |  
Sbjct: 1984 gatgtcggtaattttgcctgagcaagaacagcagctgccaactgtagactaggctccaga 1925

                                                                       
Query: 561  gtctcagggacaaccgctgatgcaccagctttctccaaattaacaccatgatcaacatc 619
            ||||| |||||||| || |  ||||| ||||| || | ||||| ||||||| |||||||
Sbjct: 1924 gtctccgggacaactgcagtagcaccggctttttctagattaagaccatgaacaacatc 1866



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>gb|AF003382.1|AF003382 Arabidopsis thaliana K efflux antiporter KEA1 mRNA, complete cds
          Length = 2350

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 142/179 (79%)
 Strand = Plus / Minus

                                                                        
Query: 441  agctccgtgagttctgacaaatgacgattcctgaactcgttgatcgttgttgcaatctca 500
            ||||| || ||||| ||||| |||||  | ||||||||||| |||||  ||||||| || 
Sbjct: 2044 agctcggtcagttcagacaagtgacgggttctgaactcgttaatcgtgtttgcaatttcc 1985

                                                                        
Query: 501  gacattggaagttttgcttgagcaagaacagcagcagccaattggagacttggttctaag 560
            ||  | || | |||||| ||||||||||||||||| ||||| || ||||| || || |  
Sbjct: 1984 gatgtcggtaattttgcctgagcaagaacagcagctgccaactgtagactaggctccaga 1925

                                                                       
Query: 561  gtctcagggacaaccgctgatgcaccagctttctccaaattaacaccatgatcaacatc 619
            ||||| |||||||| || |  ||||| ||||| || | ||||| ||||||| |||||||
Sbjct: 1924 gtctccgggacaactgcagtagcaccggctttttctagattaagaccatgaacaacatc 1866



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>gb|AC146097.4| Pan troglodytes BAC clone RP43-50K16 from 7, complete sequence
          Length = 183088

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 159    ggaagagaaaagaaacaaatgtcctac 185
              ||||||||||||||||||||| |||||
Sbjct: 157646 ggaagagaaaagaaacaaatgccctac 157620



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>gb|AC087070.2|AC087070 Homo sapiens chromosome 7 clone RP11-100L10, complete sequence
          Length = 41593

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 159   ggaagagaaaagaaacaaatgtcctac 185
             ||||||||||||||||||||| |||||
Sbjct: 28902 ggaagagaaaagaaacaaatgccctac 28928



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>gb|AC102603.11| Mus musculus chromosome 14, clone RP23-385I17, complete sequence
          Length = 204565

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 156    tttggaagagaaaagaaacaaa 177
              ||||||||||||||||||||||
Sbjct: 184180 tttggaagagaaaagaaacaaa 184159



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>gb|M25090.1|RABUTERG1 Oryctolagus cuniculus uteroglobin (UGL) gene, exon 1
          Length = 2161

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 527  aacagcagcagccaattggagacttg 552
            |||||||||||||| |||||||||||
Sbjct: 1089 aacagcagcagccacttggagacttg 1064



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>gb|AC170600.2| Mus musculus BAC clone RP23-300L16 from chromosome 14, complete sequence
          Length = 216861

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 156    tttggaagagaaaagaaacaaa 177
              ||||||||||||||||||||||
Sbjct: 191802 tttggaagagaaaagaaacaaa 191823



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>emb|X01423.1|OCUTGLOB Rabbit uteroglobin gene
          Length = 6568

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 527  aacagcagcagccaattggagacttg 552
            |||||||||||||| |||||||||||
Sbjct: 3945 aacagcagcagccacttggagacttg 3920



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>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 354     tcgctctcgtcgtcggagacc 374
               |||||||||||||||||||||
Sbjct: 2819784 tcgctctcgtcgtcggagacc 2819764



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>ref|XM_428870.1| PREDICTED: Gallus gallus LOC431319 (LOC431319), mRNA
          Length = 663

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 408 ccatagcccagggagctccca 428
           |||||||||||||||||||||
Sbjct: 335 ccatagcccagggagctccca 315



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>gb|AC161287.2| Pan troglodytes BAC clone CH251-267A11 from chromosome 7, complete
             sequence
          Length = 166684

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 161   aagagaaaagaaacaaatgtcctac 185
             ||||||||||||||||||| |||||
Sbjct: 94624 aagagaaaagaaacaaatgacctac 94600



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>gb|AC002456.2| Homo sapiens BAC clone CTB-13L3 from 7, complete sequence
          Length = 156399

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 161  aagagaaaagaaacaaatgtcctac 185
            ||||||||||||||||||| |||||
Sbjct: 6182 aagagaaaagaaacaaatgacctac 6158



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>emb|AL353663.10| Human DNA sequence from clone RP5-1007B16 on chromosome 6, complete
             sequence
          Length = 77275

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 122   aaaggggctggaaacagaaaa 142
             |||||||||||||||||||||
Sbjct: 69381 aaaggggctggaaacagaaaa 69401



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>emb|BX908798.1| Parachlamydia-related symbiont UWE25, complete genome
          Length = 2414465

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 508     gaagttttgcttgagcaagaa 528
               |||||||||||||||||||||
Sbjct: 2001471 gaagttttgcttgagcaagaa 2001491



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>gb|AC016178.9| Homo sapiens chromosome 8, clone RP11-259L23, complete sequence
          Length = 171035

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 159   ggaagagaaaagaaacaaatg 179
             |||||||||||||||||||||
Sbjct: 27286 ggaagagaaaagaaacaaatg 27306



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>emb|CR406592.1| Gallus gallus finished cDNA, clone ChEST657j15
          Length = 1160

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 514 ttgcttgagcaagaacagcagcagc 538
           ||||||||||||||| |||||||||
Sbjct: 530 ttgcttgagcaagaaaagcagcagc 554



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>gb|AC009273.2|T1N6 Sequence of BAC T1N6 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 76175

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                      
Query: 519   tgagcaagaacagcagcagccaattggagacttggttctaaggtctcagggacaacc 575
             ||||||||||||||||| ||||| || ||||| || || |  ||||| |||||||||
Sbjct: 61670 tgagcaagaacagcagctgccaactgtagactaggctccagagtctccgggacaacc 61614



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>dbj|AP001875.3| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2307G24, complete
             sequence
          Length = 34000

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 514   ttgcttgagcaagaacagcagcagc 538
             |||||||||||| ||||||||||||
Sbjct: 16593 ttgcttgagcaataacagcagcagc 16569


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,319,993
Number of Sequences: 3902068
Number of extensions: 7319993
Number of successful extensions: 164011
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 163842
Number of HSP's gapped (non-prelim): 166
length of query: 732
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 709
effective length of database: 17,143,297,704
effective search space: 12154598072136
effective search space used: 12154598072136
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
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