Clone Name | rbasd27d09 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_474399.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3465 Score = 371 bits (187), Expect = 2e-99 Identities = 304/343 (88%) Strand = Plus / Minus Query: 390 gacatgactcgagagaagccatagcccagggagctcccacttgtagaacaaagctccgtg 449 |||||||||| ||| | || |||||||| || || |||||||||| ||| | ||| ||| Sbjct: 3395 gacatgactctcgagtatccgtagcccagagaacttccacttgtagcacataactctgtg 3336 Query: 450 agttctgacaaatgacgattcctgaactcgttgatcgttgttgcaatctcagacattgga 509 || ||||||| |||||| ||||||||||| |||| |||| ||||||||| |||||||| Sbjct: 3335 agctctgacagatgacggttcctgaactcattgacagttgctgcaatctctgacattggg 3276 Query: 510 agttttgcttgagcaagaacagcagcagccaattggagacttggttctaaggtctcaggg 569 |||||||| || |||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 3275 agttttgcctgtgcaagaacagcagcagccaactggagacttggttccaaggtctcaggg 3216 Query: 570 acaaccgctgatgcaccagctttctccaaattaacaccatgatcaacatcatgtgctctg 629 |||||||||| |||||||||||||||||| |||||||||||||| |||||||| |||| | Sbjct: 3215 acaaccgctgttgcaccagctttctccaagttaacaccatgatccacatcatgcgctcgg 3156 Query: 630 acaaatgtcttcacatttggaaagtatttgctcagagcccatacagctctataatttgca 689 || |||||||||||||||||||| |||||||||| |||||| |||||||||||||||||| Sbjct: 3155 acgaatgtcttcacatttggaaaatatttgctcaaagcccagacagctctataatttgca 3096 Query: 690 ccaggagtatctaaagtaatggcagcagcacatgccctctcag 732 ||||| |||||||||||||| ||||| || || |||||||||| Sbjct: 3095 ccaggggtatctaaagtaatagcagctgcgcaggccctctcag 3053
>dbj|AK121846.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033101J11, full insert sequence Length = 4264 Score = 371 bits (187), Expect = 2e-99 Identities = 304/343 (88%) Strand = Plus / Minus Query: 390 gacatgactcgagagaagccatagcccagggagctcccacttgtagaacaaagctccgtg 449 |||||||||| ||| | || |||||||| || || |||||||||| ||| | ||| ||| Sbjct: 3740 gacatgactctcgagtatccgtagcccagagaacttccacttgtagcacataactctgtg 3681 Query: 450 agttctgacaaatgacgattcctgaactcgttgatcgttgttgcaatctcagacattgga 509 || ||||||| |||||| ||||||||||| |||| |||| ||||||||| |||||||| Sbjct: 3680 agctctgacagatgacggttcctgaactcattgacagttgctgcaatctctgacattggg 3621 Query: 510 agttttgcttgagcaagaacagcagcagccaattggagacttggttctaaggtctcaggg 569 |||||||| || |||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 3620 agttttgcctgtgcaagaacagcagcagccaactggagacttggttccaaggtctcaggg 3561 Query: 570 acaaccgctgatgcaccagctttctccaaattaacaccatgatcaacatcatgtgctctg 629 |||||||||| |||||||||||||||||| |||||||||||||| |||||||| |||| | Sbjct: 3560 acaaccgctgttgcaccagctttctccaagttaacaccatgatccacatcatgcgctcgg 3501 Query: 630 acaaatgtcttcacatttggaaagtatttgctcagagcccatacagctctataatttgca 689 || |||||||||||||||||||| |||||||||| |||||| |||||||||||||||||| Sbjct: 3500 acgaatgtcttcacatttggaaaatatttgctcaaagcccagacagctctataatttgca 3441 Query: 690 ccaggagtatctaaagtaatggcagcagcacatgccctctcag 732 ||||| |||||||||||||| ||||| || || |||||||||| Sbjct: 3440 ccaggggtatctaaagtaatagcagctgcgcaggccctctcag 3398
>dbj|AK068406.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151M09, full insert sequence Length = 2581 Score = 371 bits (187), Expect = 2e-99 Identities = 304/343 (88%) Strand = Plus / Minus Query: 390 gacatgactcgagagaagccatagcccagggagctcccacttgtagaacaaagctccgtg 449 |||||||||| ||| | || |||||||| || || |||||||||| ||| | ||| ||| Sbjct: 2029 gacatgactctcgagtatccgtagcccagagaacttccacttgtagcacataactctgtg 1970 Query: 450 agttctgacaaatgacgattcctgaactcgttgatcgttgttgcaatctcagacattgga 509 || ||||||| |||||| ||||||||||| |||| |||| ||||||||| |||||||| Sbjct: 1969 agctctgacagatgacggttcctgaactcattgacagttgctgcaatctctgacattggg 1910 Query: 510 agttttgcttgagcaagaacagcagcagccaattggagacttggttctaaggtctcaggg 569 |||||||| || |||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 1909 agttttgcctgtgcaagaacagcagcagccaactggagacttggttccaaggtctcaggg 1850 Query: 570 acaaccgctgatgcaccagctttctccaaattaacaccatgatcaacatcatgtgctctg 629 |||||||||| |||||||||||||||||| |||||||||||||| |||||||| |||| | Sbjct: 1849 acaaccgctgttgcaccagctttctccaagttaacaccatgatccacatcatgcgctcgg 1790 Query: 630 acaaatgtcttcacatttggaaagtatttgctcagagcccatacagctctataatttgca 689 || |||||||||||||||||||| |||||||||| |||||| |||||||||||||||||| Sbjct: 1789 acgaatgtcttcacatttggaaaatatttgctcaaagcccagacagctctataatttgca 1730 Query: 690 ccaggagtatctaaagtaatggcagcagcacatgccctctcag 732 ||||| |||||||||||||| ||||| || || |||||||||| Sbjct: 1729 ccaggggtatctaaagtaatagcagctgcgcaggccctctcag 1687
>gb|AY108304.1| Zea mays PCO072828 mRNA sequence Length = 879 Score = 297 bits (150), Expect = 3e-77 Identities = 242/270 (89%), Gaps = 2/270 (0%) Strand = Plus / Plus Query: 453 tctgacaaatgacgattcctgaactcgttgat-cgttgttgcaatctcagacattggaag 511 ||||||| ||||||||||| |||||||||||| | || || |||||| |||||||| || Sbjct: 365 tctgacagatgacgattccggaactcgttgatgctttcctg-aatctctgacattgggag 423 Query: 512 ttttgcttgagcaagaacagcagcagccaattggagacttggttctaaggtctcagggac 571 ||||||||| ||||||||||||||||| | || |||||||| || |||||||||||||| Sbjct: 424 ttttgcttgtgcaagaacagcagcagctagctgaagacttggctccaaggtctcagggac 483 Query: 572 aaccgctgatgcaccagctttctccaaattaacaccatgatcaacatcatgtgctctgac 631 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 484 aaccgctgttgcaccagctttctccaaattaacaccatgatcaacatcatgtgctctaac 543 Query: 632 aaatgtcttcacatttggaaagtatttgctcagagcccatacagctctataatttgcacc 691 |||||||||||||||||| || |||||| ||| ||||| ||||||||||| |||||||| Sbjct: 544 aaatgtcttcacatttgggaaatatttgttcaatgcccagacagctctatagtttgcacc 603 Query: 692 aggagtatctaaagtaatggcagcagcaca 721 ||| ||||| |||||||| ||||||||||| Sbjct: 604 aggggtatccaaagtaattgcagcagcaca 633
>dbj|AK103142.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033120G14, full insert sequence Length = 1306 Score = 222 bits (112), Expect = 1e-54 Identities = 154/168 (91%) Strand = Plus / Minus Query: 565 cagggacaaccgctgatgcaccagctttctccaaattaacaccatgatcaacatcatgtg 624 ||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||| | Sbjct: 1306 cagggacaaccgctgttgcaccagctttctccaagttaacaccatgatccacatcatgcg 1247 Query: 625 ctctgacaaatgtcttcacatttggaaagtatttgctcagagcccatacagctctataat 684 ||| ||| |||||||||||||||||||| |||||||||| |||||| ||||||||||||| Sbjct: 1246 ctcggacgaatgtcttcacatttggaaaatatttgctcaaagcccagacagctctataat 1187 Query: 685 ttgcaccaggagtatctaaagtaatggcagcagcacatgccctctcag 732 |||||||||| |||||||||||||| ||||| || || |||||||||| Sbjct: 1186 ttgcaccaggggtatctaaagtaatagcagctgcgcaggccctctcag 1139
>emb|AL606641.3|OSJN00074 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0032F06, complete sequence Length = 148023 Score = 206 bits (104), Expect = 7e-50 Identities = 146/160 (91%) Strand = Plus / Plus Query: 573 accgctgatgcaccagctttctccaaattaacaccatgatcaacatcatgtgctctgaca 632 ||||||| |||||||||||||||||| |||||||||||||| |||||||| |||| ||| Sbjct: 103287 accgctgttgcaccagctttctccaagttaacaccatgatccacatcatgcgctcggacg 103346 Query: 633 aatgtcttcacatttggaaagtatttgctcagagcccatacagctctataatttgcacca 692 |||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||| Sbjct: 103347 aatgtcttcacatttggaaaatatttgctcaaagcccagacagctctataatttgcacca 103406 Query: 693 ggagtatctaaagtaatggcagcagcacatgccctctcag 732 || |||||||||||||| ||||| || || |||||||||| Sbjct: 103407 ggggtatctaaagtaatagcagctgcgcaggccctctcag 103446 Score = 91.7 bits (46), Expect = 3e-15 Identities = 52/54 (96%) Strand = Plus / Plus Query: 522 gcaagaacagcagcagccaattggagacttggttctaaggtctcagggacaacc 575 |||||||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct: 102617 gcaagaacagcagcagccaactggagacttggttccaaggtctcagggacaacc 102670 Score = 73.8 bits (37), Expect = 7e-10 Identities = 70/81 (86%) Strand = Plus / Plus Query: 437 acaaagctccgtgagttctgacaaatgacgattcctgaactcgttgatcgttgttgcaat 496 ||||| ||| ||||| ||||||| |||||| ||||||||||| |||| |||| |||||| Sbjct: 102436 acaaacctctgtgagctctgacagatgacggttcctgaactcattgacagttgctgcaat 102495 Query: 497 ctcagacattggaagttttgc 517 ||| |||||||| |||||||| Sbjct: 102496 ctctgacattgggagttttgc 102516
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 206 bits (104), Expect = 7e-50 Identities = 146/160 (91%) Strand = Plus / Plus Query: 573 accgctgatgcaccagctttctccaaattaacaccatgatcaacatcatgtgctctgaca 632 ||||||| |||||||||||||||||| |||||||||||||| |||||||| |||| ||| Sbjct: 34897174 accgctgttgcaccagctttctccaagttaacaccatgatccacatcatgcgctcggacg 34897233 Query: 633 aatgtcttcacatttggaaagtatttgctcagagcccatacagctctataatttgcacca 692 |||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||| Sbjct: 34897234 aatgtcttcacatttggaaaatatttgctcaaagcccagacagctctataatttgcacca 34897293 Query: 693 ggagtatctaaagtaatggcagcagcacatgccctctcag 732 || |||||||||||||| ||||| || || |||||||||| Sbjct: 34897294 ggggtatctaaagtaatagcagctgcgcaggccctctcag 34897333 Score = 91.7 bits (46), Expect = 3e-15 Identities = 52/54 (96%) Strand = Plus / Plus Query: 522 gcaagaacagcagcagccaattggagacttggttctaaggtctcagggacaacc 575 |||||||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct: 34896504 gcaagaacagcagcagccaactggagacttggttccaaggtctcagggacaacc 34896557 Score = 73.8 bits (37), Expect = 7e-10 Identities = 70/81 (86%) Strand = Plus / Plus Query: 437 acaaagctccgtgagttctgacaaatgacgattcctgaactcgttgatcgttgttgcaat 496 ||||| ||| ||||| ||||||| |||||| ||||||||||| |||| |||| |||||| Sbjct: 34896323 acaaacctctgtgagctctgacagatgacggttcctgaactcattgacagttgctgcaat 34896382 Query: 497 ctcagacattggaagttttgc 517 ||| |||||||| |||||||| Sbjct: 34896383 ctctgacattgggagttttgc 34896403
>emb|AL732352.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0124B04, complete sequence Length = 115564 Score = 206 bits (104), Expect = 7e-50 Identities = 146/160 (91%) Strand = Plus / Plus Query: 573 accgctgatgcaccagctttctccaaattaacaccatgatcaacatcatgtgctctgaca 632 ||||||| |||||||||||||||||| |||||||||||||| |||||||| |||| ||| Sbjct: 76613 accgctgttgcaccagctttctccaagttaacaccatgatccacatcatgcgctcggacg 76672 Query: 633 aatgtcttcacatttggaaagtatttgctcagagcccatacagctctataatttgcacca 692 |||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||| Sbjct: 76673 aatgtcttcacatttggaaaatatttgctcaaagcccagacagctctataatttgcacca 76732 Query: 693 ggagtatctaaagtaatggcagcagcacatgccctctcag 732 || |||||||||||||| ||||| || || |||||||||| Sbjct: 76733 ggggtatctaaagtaatagcagctgcgcaggccctctcag 76772 Score = 91.7 bits (46), Expect = 3e-15 Identities = 52/54 (96%) Strand = Plus / Plus Query: 522 gcaagaacagcagcagccaattggagacttggttctaaggtctcagggacaacc 575 |||||||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct: 75943 gcaagaacagcagcagccaactggagacttggttccaaggtctcagggacaacc 75996 Score = 73.8 bits (37), Expect = 7e-10 Identities = 70/81 (86%) Strand = Plus / Plus Query: 437 acaaagctccgtgagttctgacaaatgacgattcctgaactcgttgatcgttgttgcaat 496 ||||| ||| ||||| ||||||| |||||| ||||||||||| |||| |||| |||||| Sbjct: 75762 acaaacctctgtgagctctgacagatgacggttcctgaactcattgacagttgctgcaat 75821 Query: 497 ctcagacattggaagttttgc 517 ||| |||||||| |||||||| Sbjct: 75822 ctctgacattgggagttttgc 75842
>gb|AC123899.15| Medicago truncatula clone mth2-33n6, complete sequence Length = 127126 Score = 119 bits (60), Expect = 1e-23 Identities = 126/148 (85%) Strand = Plus / Minus Query: 585 ccagctttctccaaattaacaccatgatcaacatcatgtgctctgacaaatgtcttcaca 644 ||||| ||||| ||||| || ||||||||||| ||||| || | ||||| ||||||||| Sbjct: 113720 ccagccttctctaaattcactccatgatcaacgtcatgggcgcgaacaaaagtcttcaca 113661 Query: 645 tttggaaagtatttgctcagagcccatacagctctataatttgcaccaggagtatctaaa 704 ||||| ||||| || ||||||||||| || | |||||||||||| ||||| ||||||| | Sbjct: 113660 tttgggaagtacttactcagagcccaaactgttctataatttgctccaggcgtatctaga 113601 Query: 705 gtaatggcagcagcacatgccctctcag 732 ||||| || |||||||||||||| |||| Sbjct: 113600 gtaatagctgcagcacatgccctttcag 113573
>gb|AC148817.3| Medicago truncatula chromosome 7 BAC clone mth2-22c10, complete sequence Length = 123020 Score = 119 bits (60), Expect = 1e-23 Identities = 126/148 (85%) Strand = Plus / Minus Query: 585 ccagctttctccaaattaacaccatgatcaacatcatgtgctctgacaaatgtcttcaca 644 ||||| ||||| ||||| || ||||||||||| ||||| || | ||||| ||||||||| Sbjct: 5917 ccagccttctctaaattcactccatgatcaacgtcatgggcgcgaacaaaagtcttcaca 5858 Query: 645 tttggaaagtatttgctcagagcccatacagctctataatttgcaccaggagtatctaaa 704 ||||| ||||| || ||||||||||| || | |||||||||||| ||||| ||||||| | Sbjct: 5857 tttgggaagtacttactcagagcccaaactgttctataatttgctccaggcgtatctaga 5798 Query: 705 gtaatggcagcagcacatgccctctcag 732 ||||| || |||||||||||||| |||| Sbjct: 5797 gtaatagctgcagcacatgccctttcag 5770
>ref|NM_116288.2| Arabidopsis thaliana KEA2; potassium:hydrogen antiporter AT4G00630 (KEA2) mRNA, complete cds Length = 1884 Score = 101 bits (51), Expect = 3e-18 Identities = 219/275 (79%) Strand = Plus / Minus Query: 450 agttctgacaaatgacgattcctgaactcgttgatcgttgttgcaatctcagacattgga 509 ||||| ||||| |||||| ||||||||||||||||||||||| || || || | || Sbjct: 1751 agttcagacaagtgacgagatctgaactcgttgatcgttgttgctatttctgatgtaggt 1692 Query: 510 agttttgcttgagcaagaacagcagcagccaattggagacttggttctaaggtctcaggg 569 | ||| || || |||||||||||||| || || || ||||||||||| | |||||||| Sbjct: 1691 aatttggcctgtgcaagaacagcagctgctaactgaagacttggttccagcgtctcagga 1632 Query: 570 acaaccgctgatgcaccagctttctccaaattaacaccatgatcaacatcatgtgctctg 629 ||||| || | || || ||||| || | ||| | |||||||||||| |||||||| | | Sbjct: 1631 acaacagcggtagcgccggctttttcaagattgagaccatgatcaacgtcatgtgcacgg 1572 Query: 630 acaaatgtcttcacatttggaaagtatttgctcagagcccatacagctctataatttgca 689 ||||| || || ||||| || || |||||||| |||||||| ||| || |||||||| Sbjct: 1571 acaaaggttttgacattggggaaatatttgctaagagcccagacacacctgtaatttgct 1512 Query: 690 ccaggagtatctaaagtaatggcagcagcacatgc 724 ||||| || ||||||| ||| || ||||||||||| Sbjct: 1511 ccaggtgtgtctaaagcaatagccgcagcacatgc 1477
>dbj|AP006402.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT34J23, TM0284, complete sequence Length = 92675 Score = 85.7 bits (43), Expect = 2e-13 Identities = 106/127 (83%) Strand = Plus / Plus Query: 606 ccatgatcaacatcatgtgctctgacaaatgtcttcacatttggaaagtatttgctcaga 665 ||||||||||| ||||| || | ||||| ||||||||||| || ||||| ||||| ||| Sbjct: 56792 ccatgatcaacgtcatgggcacgaacaaaagtcttcacattagggaagtacttgctaaga 56851 Query: 666 gcccatacagctctataatttgcaccaggagtatctaaagtaatggcagcagcacatgcc 725 ||||| || | |||||||||||| || || ||||||| ||| || || |||||||||||| Sbjct: 56852 gcccaaactgttctataatttgctcccggcgtatctagagttattgctgcagcacatgcc 56911 Query: 726 ctctcag 732 || |||| Sbjct: 56912 ctttcag 56918
>emb|AL161472.2|ATCHRIV2 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 2 Length = 197975 Score = 71.9 bits (36), Expect = 3e-09 Identities = 99/120 (82%) Strand = Plus / Plus Query: 605 accatgatcaacatcatgtgctctgacaaatgtcttcacatttggaaagtatttgctcag 664 |||||||||||| |||||||| | |||||| || || ||||| || || |||||||| || Sbjct: 68879 accatgatcaacgtcatgtgcacggacaaaggttttgacattggggaaatatttgctaag 68938 Query: 665 agcccatacagctctataatttgcaccaggagtatctaaagtaatggcagcagcacatgc 724 |||||| ||| || |||||||| ||||| || ||||||| ||| || ||||||||||| Sbjct: 68939 agcccagacacacctgtaatttgctccaggtgtgtctaaagcaatagccgcagcacatgc 68998 Score = 48.1 bits (24), Expect = 0.041 Identities = 39/44 (88%) Strand = Plus / Plus Query: 450 agttctgacaaatgacgattcctgaactcgttgatcgttgttgc 493 ||||| ||||| |||||| ||||||||||||||||||||||| Sbjct: 68548 agttcagacaagtgacgagatctgaactcgttgatcgttgttgc 68591 Score = 44.1 bits (22), Expect = 0.64 Identities = 46/54 (85%) Strand = Plus / Plus Query: 522 gcaagaacagcagcagccaattggagacttggttctaaggtctcagggacaacc 575 |||||||||||||| || || || ||||||||||| | |||||||| |||||| Sbjct: 68703 gcaagaacagcagctgctaactgaagacttggttccagcgtctcaggaacaacc 68756
>gb|AF058919.2|F6N23 Arabidopsis thaliana BAC F6N23 Length = 91849 Score = 71.9 bits (36), Expect = 3e-09 Identities = 99/120 (82%) Strand = Plus / Plus Query: 605 accatgatcaacatcatgtgctctgacaaatgtcttcacatttggaaagtatttgctcag 664 |||||||||||| |||||||| | |||||| || || ||||| || || |||||||| || Sbjct: 50005 accatgatcaacgtcatgtgcacggacaaaggttttgacattggggaaatatttgctaag 50064 Query: 665 agcccatacagctctataatttgcaccaggagtatctaaagtaatggcagcagcacatgc 724 |||||| ||| || |||||||| ||||| || ||||||| ||| || ||||||||||| Sbjct: 50065 agcccagacacacctgtaatttgctccaggtgtgtctaaagcaatagccgcagcacatgc 50124 Score = 48.1 bits (24), Expect = 0.041 Identities = 39/44 (88%) Strand = Plus / Plus Query: 450 agttctgacaaatgacgattcctgaactcgttgatcgttgttgc 493 ||||| ||||| |||||| ||||||||||||||||||||||| Sbjct: 49674 agttcagacaagtgacgagatctgaactcgttgatcgttgttgc 49717 Score = 44.1 bits (22), Expect = 0.64 Identities = 46/54 (85%) Strand = Plus / Plus Query: 522 gcaagaacagcagcagccaattggagacttggttctaaggtctcagggacaacc 575 |||||||||||||| || || || ||||||||||| | |||||||| |||||| Sbjct: 49829 gcaagaacagcagctgctaactgaagacttggttccagcgtctcaggaacaacc 49882
>ref|NM_100062.2| Arabidopsis thaliana KEA1 (K EFFLUX ANTIPORTER 1); potassium:hydrogen antiporter AT1G01790 (KEA1) mRNA, complete cds Length = 2385 Score = 61.9 bits (31), Expect = 3e-06 Identities = 142/179 (79%) Strand = Plus / Minus Query: 441 agctccgtgagttctgacaaatgacgattcctgaactcgttgatcgttgttgcaatctca 500 ||||| || ||||| ||||| ||||| | ||||||||||| ||||| ||||||| || Sbjct: 2044 agctcggtcagttcagacaagtgacgggttctgaactcgttaatcgtgtttgcaatttcc 1985 Query: 501 gacattggaagttttgcttgagcaagaacagcagcagccaattggagacttggttctaag 560 || | || | |||||| ||||||||||||||||| ||||| || ||||| || || | Sbjct: 1984 gatgtcggtaattttgcctgagcaagaacagcagctgccaactgtagactaggctccaga 1925 Query: 561 gtctcagggacaaccgctgatgcaccagctttctccaaattaacaccatgatcaacatc 619 ||||| |||||||| || | ||||| ||||| || | ||||| ||||||| ||||||| Sbjct: 1924 gtctccgggacaactgcagtagcaccggctttttctagattaagaccatgaacaacatc 1866
>gb|AF003382.1|AF003382 Arabidopsis thaliana K efflux antiporter KEA1 mRNA, complete cds Length = 2350 Score = 61.9 bits (31), Expect = 3e-06 Identities = 142/179 (79%) Strand = Plus / Minus Query: 441 agctccgtgagttctgacaaatgacgattcctgaactcgttgatcgttgttgcaatctca 500 ||||| || ||||| ||||| ||||| | ||||||||||| ||||| ||||||| || Sbjct: 2044 agctcggtcagttcagacaagtgacgggttctgaactcgttaatcgtgtttgcaatttcc 1985 Query: 501 gacattggaagttttgcttgagcaagaacagcagcagccaattggagacttggttctaag 560 || | || | |||||| ||||||||||||||||| ||||| || ||||| || || | Sbjct: 1984 gatgtcggtaattttgcctgagcaagaacagcagctgccaactgtagactaggctccaga 1925 Query: 561 gtctcagggacaaccgctgatgcaccagctttctccaaattaacaccatgatcaacatc 619 ||||| |||||||| || | ||||| ||||| || | ||||| ||||||| ||||||| Sbjct: 1924 gtctccgggacaactgcagtagcaccggctttttctagattaagaccatgaacaacatc 1866
>gb|AC146097.4| Pan troglodytes BAC clone RP43-50K16 from 7, complete sequence Length = 183088 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 159 ggaagagaaaagaaacaaatgtcctac 185 ||||||||||||||||||||| ||||| Sbjct: 157646 ggaagagaaaagaaacaaatgccctac 157620
>gb|AC087070.2|AC087070 Homo sapiens chromosome 7 clone RP11-100L10, complete sequence Length = 41593 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Plus Query: 159 ggaagagaaaagaaacaaatgtcctac 185 ||||||||||||||||||||| ||||| Sbjct: 28902 ggaagagaaaagaaacaaatgccctac 28928
>gb|AC102603.11| Mus musculus chromosome 14, clone RP23-385I17, complete sequence Length = 204565 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 156 tttggaagagaaaagaaacaaa 177 |||||||||||||||||||||| Sbjct: 184180 tttggaagagaaaagaaacaaa 184159
>gb|M25090.1|RABUTERG1 Oryctolagus cuniculus uteroglobin (UGL) gene, exon 1 Length = 2161 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Minus Query: 527 aacagcagcagccaattggagacttg 552 |||||||||||||| ||||||||||| Sbjct: 1089 aacagcagcagccacttggagacttg 1064
>gb|AC170600.2| Mus musculus BAC clone RP23-300L16 from chromosome 14, complete sequence Length = 216861 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 156 tttggaagagaaaagaaacaaa 177 |||||||||||||||||||||| Sbjct: 191802 tttggaagagaaaagaaacaaa 191823
>emb|X01423.1|OCUTGLOB Rabbit uteroglobin gene Length = 6568 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Minus Query: 527 aacagcagcagccaattggagacttg 552 |||||||||||||| ||||||||||| Sbjct: 3945 aacagcagcagccacttggagacttg 3920
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 354 tcgctctcgtcgtcggagacc 374 ||||||||||||||||||||| Sbjct: 2819784 tcgctctcgtcgtcggagacc 2819764
>ref|XM_428870.1| PREDICTED: Gallus gallus LOC431319 (LOC431319), mRNA Length = 663 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 408 ccatagcccagggagctccca 428 ||||||||||||||||||||| Sbjct: 335 ccatagcccagggagctccca 315
>gb|AC161287.2| Pan troglodytes BAC clone CH251-267A11 from chromosome 7, complete sequence Length = 166684 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 161 aagagaaaagaaacaaatgtcctac 185 ||||||||||||||||||| ||||| Sbjct: 94624 aagagaaaagaaacaaatgacctac 94600
>gb|AC002456.2| Homo sapiens BAC clone CTB-13L3 from 7, complete sequence Length = 156399 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 161 aagagaaaagaaacaaatgtcctac 185 ||||||||||||||||||| ||||| Sbjct: 6182 aagagaaaagaaacaaatgacctac 6158
>emb|AL353663.10| Human DNA sequence from clone RP5-1007B16 on chromosome 6, complete sequence Length = 77275 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 122 aaaggggctggaaacagaaaa 142 ||||||||||||||||||||| Sbjct: 69381 aaaggggctggaaacagaaaa 69401
>emb|BX908798.1| Parachlamydia-related symbiont UWE25, complete genome Length = 2414465 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 508 gaagttttgcttgagcaagaa 528 ||||||||||||||||||||| Sbjct: 2001471 gaagttttgcttgagcaagaa 2001491
>gb|AC016178.9| Homo sapiens chromosome 8, clone RP11-259L23, complete sequence Length = 171035 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 159 ggaagagaaaagaaacaaatg 179 ||||||||||||||||||||| Sbjct: 27286 ggaagagaaaagaaacaaatg 27306
>emb|CR406592.1| Gallus gallus finished cDNA, clone ChEST657j15 Length = 1160 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 514 ttgcttgagcaagaacagcagcagc 538 ||||||||||||||| ||||||||| Sbjct: 530 ttgcttgagcaagaaaagcagcagc 554
>gb|AC009273.2|T1N6 Sequence of BAC T1N6 from Arabidopsis thaliana chromosome 1, complete sequence Length = 76175 Score = 42.1 bits (21), Expect = 2.5 Identities = 48/57 (84%) Strand = Plus / Minus Query: 519 tgagcaagaacagcagcagccaattggagacttggttctaaggtctcagggacaacc 575 ||||||||||||||||| ||||| || ||||| || || | ||||| ||||||||| Sbjct: 61670 tgagcaagaacagcagctgccaactgtagactaggctccagagtctccgggacaacc 61614
>dbj|AP001875.3| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2307G24, complete sequence Length = 34000 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 514 ttgcttgagcaagaacagcagcagc 538 |||||||||||| |||||||||||| Sbjct: 16593 ttgcttgagcaataacagcagcagc 16569 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,319,993 Number of Sequences: 3902068 Number of extensions: 7319993 Number of successful extensions: 164011 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 32 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 163842 Number of HSP's gapped (non-prelim): 166 length of query: 732 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 709 effective length of database: 17,143,297,704 effective search space: 12154598072136 effective search space used: 12154598072136 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 21 (42.1 bits)