ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd26o04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|BT009302.1| Triticum aestivum clone wlm1.pk0014.e3:fis, full ... 791 0.0
2dbj|AK119251.1| Oryza sativa (japonica cultivar-group) cDNA clon... 170 3e-39
3dbj|AK060769.1| Oryza sativa (japonica cultivar-group) cDNA clon... 170 3e-39
4gb|AY103776.1| Zea mays PCO077793 mRNA sequence 153 8e-34
5gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 101 3e-18
6gb|AC107315.1| Genomic sequence for Oryza sativa, Nipponbare str... 101 3e-18
7dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 101 3e-18
8gb|AY450640.1| Solanum tuberosum oxysterol-binding protein mRNA,... 68 4e-08
9gb|AC150555.1| Drosophila melanogaster clone BACR26G12, complete... 42 2.1
10gb|AC007299.18|AC007299 Drosophila melanogaster, chromosome 2L, ... 42 2.1
11gb|AC084652.1|CBRG45O11 Caenorhabditis briggsae cosmid G45O11, c... 42 2.1
12gb|AC007257.9|AC007257 Drosophila melanogaster, chromosome 2L, r... 42 2.1
13gb|AE003625.3| Drosophila melanogaster chromosome 2L, section 34... 42 2.1
14ref|XM_478238.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.1
15ref|XM_472990.1| Oryza sativa (japonica cultivar-group), predic... 40 8.1
16ref|XM_362059.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 8.1
17ref|XM_804221.1| Trypanosoma cruzi strain CL Brener protein kina... 40 8.1
18ref|XM_804530.1| Trypanosoma cruzi strain CL Brener protein kina... 40 8.1
19emb|AL512510.13| Human DNA sequence from clone RP11-537P24 on ch... 40 8.1
20ref|XM_792977.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 8.1
21emb|AL354854.8| Human DNA sequence from clone RP11-572H4 on chro... 40 8.1
22emb|AL731617.3|OSJN00261 Oryza sativa genomic DNA, chromosome 4,... 40 8.1
23gb|AC079935.3| Genomic sequence for Oryza sativa (japonica culti... 40 8.1
24dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
25dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
26dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
27dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 8.1
28dbj|AP005177.4| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
29dbj|AK069045.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.1
30gb|AC102452.7| Mus musculus chromosome 5, clone RP24-272L20, com... 40 8.1
31gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 8.1
32emb|AL606613.3|OSJN00051 Oryza sativa genomic DNA, chromosome 4,... 40 8.1
33emb|AL807248.7| Mouse DNA sequence from clone RP23-400M20 on chr... 40 8.1

>gb|BT009302.1| Triticum aestivum clone wlm1.pk0014.e3:fis, full insert mRNA sequence
          Length = 1264

 Score =  791 bits (399), Expect = 0.0
 Identities = 544/585 (92%), Gaps = 12/585 (2%)
 Strand = Plus / Minus

                                                                        
Query: 16   caaatacacaatncacatcctgaactgtatgacaccatgaacagaaaaa-gtggaaagtc 74
            |||||||||||| ||||||||||||||||| ||| |||||| ||||||| ||||||||||
Sbjct: 1177 caaatacacaat-cacatcctgaactgtatcacagcatgaagagaaaaaagtggaaagtc 1119

                                                                        
Query: 75   atatataacactacaaaggcacgaaaaccgccggtatggatatcagcacaaggcctgaaa 134
            |||||  | ||||||| |||||||||||| |||||||||||  |||||||||||||||||
Sbjct: 1118 atata--atactacaa-ggcacgaaaaccaccggtatggat--cagcacaaggcctgaaa 1064

                                                                        
Query: 135  gcgtttttgatgagaagt--aatatatgggtggcttcagaccctttgaaatcattgggaa 192
            ||||||| ||||||||    |||||||||||||||||||||||||| |||||||||||||
Sbjct: 1063 gcgttttagatgagaaaataaatatatgggtggcttcagaccctttcaaatcattgggaa 1004

                                                                        
Query: 193  ggcgagtcgccatactgccacgggttgaactcgatggagctgacgtccgtctcctcggcg 252
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 1003 ggcgagtcgccatactgccacgggttgaactcgatggagctgacgtccgtctcctcggca 944

                                                                        
Query: 253  acgaccacgctagagctgtctatcgcggcccggtgctcggtgtatctgccgttgtactcg 312
            ||| |    ||||||||||||||||| ||||||||||||| ||||||||| |||||||| 
Sbjct: 943  acggca---ctagagctgtctatcgcagcccggtgctcggcgtatctgccattgtactca 887

                                                                        
Query: 313  tacacctccaggtcgccccacggggtaggggagatgtcttccgtcatcttgaaccatttt 372
            ||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 886  tacacctccagatcgccccacggggtaggggagatgtcttcggtcattttgaaccatttt 827

                                                                        
Query: 373  ggagtgaacttctcccccttggtgtcccggattttcttctcggctcgttgttgttcttca 432
            || || |||| |||||||||||||||||||||||||||||| |||| |||||||||||||
Sbjct: 826  ggtgtaaactgctcccccttggtgtcccggattttcttctcagctctttgttgttcttca 767

                                                                        
Query: 433  agcctgctcttatgtgccccagatttagacatgtcgcccttctcaagggcatatctgtcg 492
            ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 766  agcctgctcttgtgtgccccagatttagacatgtcacccttctcaagggcatatctgtcg 707

                                                                        
Query: 493  ggccttaatcgggagtctgaaggcaagagcttcttangtgctgtatcaaagctatttatt 552
            |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 706  ggccttaatcgggagtctgaaggcaagagcttcttaggtgctgtatcaaagctatttatt 647

                                                         
Query: 553  ttgtgtgcaaagtatgtatactggtacttgtcactcggtggagca 597
            ||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct: 646  ttgtgcgcaaagtatgtatactggtacttgtcattcggtggagca 602



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>dbj|AK119251.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-122-D09, full
           insert sequence
          Length = 821

 Score =  170 bits (86), Expect = 3e-39
 Identities = 315/391 (80%), Gaps = 3/391 (0%)
 Strand = Plus / Minus

                                                                       
Query: 205 tactgccacgggttgaactcgatggagctgacgtccgtctcctcggcgacgaccacgcta 264
           ||||||||||||||||| ||||| ||  ||||||| || || ||| || |   ||| || 
Sbjct: 583 tactgccacgggttgaattcgatcgaagtgacgtctgtatcgtcgtcggc---cacactt 527

                                                                       
Query: 265 gagctgtctatcgcggcccggtgctcggtgtatctgccgttgtactcgtacacctccagg 324
           |||||||| || || || ||||||||||||||| | || ||||| || ||||| ||||| 
Sbjct: 526 gagctgtcaatggcagcgcggtgctcggtgtattttccattgtattcatacacttccagc 467

                                                                       
Query: 325 tcgccccacggggtaggggagatgtcttccgtcatcttgaaccattttggagtgaacttc 384
           |||||||| || ||||||| ||| || || ||| | || |||||| ||||||| || | |
Sbjct: 466 tcgccccagggtgtaggggcgatttcatcggtcctgttaaaccatcttggagtaaattgc 407

                                                                       
Query: 385 tcccccttggtgtcccggattttcttctcggctcgttgttgttcttcaagcctgctctta 444
           ||||||||||  || ||  || | ||||| |||| |||||| ||||||||||||||||| 
Sbjct: 406 tcccccttggcctctcgtgttcttttctcagctctttgttgctcttcaagcctgctcttt 347

                                                                       
Query: 445 tgtgccccagatttagacatgtcgcccttctcaagggcatatctgtcgggccttaatcgg 504
           | ||  || ||||| |||||||| |||||||| ||||||||||| || ||||| ||||||
Sbjct: 346 tctgaacctgattttgacatgtcacccttctcgagggcatatctatcaggcctcaatcgg 287

                                                                       
Query: 505 gagtctgaaggcaagagcttcttangtgctgtatcaaagctatttattttgtgtgcaaag 564
           ||||| || | ||| ||||||||  | || ||||| ||||| ||||||||||| || |||
Sbjct: 286 gagtccgatgccaatagcttcttcggcgccgtatcgaagctgtttattttgtgcgcgaag 227

                                          
Query: 565 tatgtatactggtacttgtcactcggtggag 595
           |  || ||||||||||||||| | |||||||
Sbjct: 226 tgcgtgtactggtacttgtcatttggtggag 196



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 79  ataacactacaaaggcacgaaaac 102
           |||| |||||||||||||||||||
Sbjct: 718 ataatactacaaaggcacgaaaac 695



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>dbj|AK060769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-B01, full
            insert sequence
          Length = 1898

 Score =  170 bits (86), Expect = 3e-39
 Identities = 315/391 (80%), Gaps = 3/391 (0%)
 Strand = Plus / Minus

                                                                        
Query: 205  tactgccacgggttgaactcgatggagctgacgtccgtctcctcggcgacgaccacgcta 264
            ||||||||||||||||| ||||| ||  ||||||| || || ||| || |   ||| || 
Sbjct: 1660 tactgccacgggttgaattcgatcgaagtgacgtctgtatcgtcgtcggc---cacactt 1604

                                                                        
Query: 265  gagctgtctatcgcggcccggtgctcggtgtatctgccgttgtactcgtacacctccagg 324
            |||||||| || || || ||||||||||||||| | || ||||| || ||||| ||||| 
Sbjct: 1603 gagctgtcaatggcagcgcggtgctcggtgtattttccattgtattcatacacttccagc 1544

                                                                        
Query: 325  tcgccccacggggtaggggagatgtcttccgtcatcttgaaccattttggagtgaacttc 384
            |||||||| || ||||||| ||| || || ||| | || |||||| ||||||| || | |
Sbjct: 1543 tcgccccagggtgtaggggcgatttcatcggtcctgttaaaccatcttggagtaaattgc 1484

                                                                        
Query: 385  tcccccttggtgtcccggattttcttctcggctcgttgttgttcttcaagcctgctctta 444
            ||||||||||  || ||  || | ||||| |||| |||||| ||||||||||||||||| 
Sbjct: 1483 tcccccttggcctctcgtgttcttttctcagctctttgttgctcttcaagcctgctcttt 1424

                                                                        
Query: 445  tgtgccccagatttagacatgtcgcccttctcaagggcatatctgtcgggccttaatcgg 504
            | ||  || ||||| |||||||| |||||||| ||||||||||| || ||||| ||||||
Sbjct: 1423 tctgaacctgattttgacatgtcacccttctcgagggcatatctatcaggcctcaatcgg 1364

                                                                        
Query: 505  gagtctgaaggcaagagcttcttangtgctgtatcaaagctatttattttgtgtgcaaag 564
            ||||| || | ||| ||||||||  | || ||||| ||||| ||||||||||| || |||
Sbjct: 1363 gagtccgatgccaatagcttcttcggcgccgtatcgaagctgtttattttgtgcgcgaag 1304

                                           
Query: 565  tatgtatactggtacttgtcactcggtggag 595
            |  || ||||||||||||||| | |||||||
Sbjct: 1303 tgcgtgtactggtacttgtcatttggtggag 1273



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 79   ataacactacaaaggcacgaaaac 102
            |||| |||||||||||||||||||
Sbjct: 1795 ataatactacaaaggcacgaaaac 1772



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>gb|AY103776.1| Zea mays PCO077793 mRNA sequence
          Length = 1843

 Score =  153 bits (77), Expect = 8e-34
 Identities = 259/320 (80%)
 Strand = Plus / Minus

                                                                        
Query: 265  gagctgtctatcgcggcccggtgctcggtgtatctgccgttgtactcgtacacctccagg 324
            |||| |||||| || ||||||||||| |||||| |||||||||| || || |  ||||||
Sbjct: 1493 gagcggtctatggcagcccggtgctctgtgtatttgccgttgtattcataaatttccagg 1434

                                                                        
Query: 325  tcgccccacggggtaggggagatgtcttccgtcatcttgaaccattttggagtgaacttc 384
            || |||||||| ||||||||||   | || ||||  ||||||||| | ||||| || | |
Sbjct: 1433 tcaccccacggtgtaggggagaccacatctgtcaggttgaaccatctaggagtaaattgc 1374

                                                                        
Query: 385  tcccccttggtgtcccggattttcttctcggctcgttgttgttcttcaagcctgctctta 444
            || |||||||  || ||  ||   ||||| ||||  |||||||| || ||||||||||| 
Sbjct: 1373 tcgcccttggcctctcgagttcgtttctcagctctctgttgttcctcgagcctgctcttc 1314

                                                                        
Query: 445  tgtgccccagatttagacatgtcgcccttctcaagggcatatctgtcgggccttaatcgg 504
            | ||||||||| ||||||||||| |||||||| ||||||||||| || ||||| |  || 
Sbjct: 1313 tctgccccagacttagacatgtcacccttctcgagggcatatctatcaggcctcagccgt 1254

                                                                        
Query: 505  gagtctgaaggcaagagcttcttangtgctgtatcaaagctatttattttgtgtgcaaag 564
            || || || | ||| ||||||||| |||| || || ||||| ||||||||||||||||||
Sbjct: 1253 gaatcagatgccaacagcttcttaggtgccgtgtcgaagctgtttattttgtgtgcaaag 1194

                                
Query: 565  tatgtatactggtacttgtc 584
            | ||| ||||||||||||||
Sbjct: 1193 tgtgtgtactggtacttgtc 1174



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  101 bits (51), Expect = 3e-18
 Identities = 119/142 (83%)
 Strand = Plus / Minus

                                                                           
Query: 454     gatttagacatgtcgcccttctcaagggcatatctgtcgggccttaatcgggagtctgaa 513
               ||||| |||||||| |||||||| ||||||||||| || ||||| ||||||||||| || 
Sbjct: 9195785 gattttgacatgtcacccttctcgagggcatatctatcaggcctcaatcgggagtccgat 9195726

                                                                           
Query: 514     ggcaagagcttcttangtgctgtatcaaagctatttattttgtgtgcaaagtatgtatac 573
               | ||| ||||||||  | || ||||| ||||| ||||||||||| || ||||  || |||
Sbjct: 9195725 gccaatagcttcttcggcgccgtatcgaagctgtttattttgtgcgcgaagtgcgtgtac 9195666

                                     
Query: 574     tggtacttgtcactcggtggag 595
               |||||||||||| | |||||||
Sbjct: 9195665 tggtacttgtcatttggtggag 9195644



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 186/234 (79%), Gaps = 3/234 (1%)
 Strand = Plus / Minus

                                                                           
Query: 205     tactgccacgggttgaactcgatggagctgacgtccgtctcctcggcgacgaccacgcta 264
               ||||||||||||||||| ||||| ||  ||||||| || || ||| || |   ||| || 
Sbjct: 9196136 tactgccacgggttgaattcgatcgaagtgacgtctgtatcgtcgtcggc---cacactt 9196080

                                                                           
Query: 265     gagctgtctatcgcggcccggtgctcggtgtatctgccgttgtactcgtacacctccagg 324
               |||||||| || || || ||||||||||||||| | || ||||| || ||||| ||||| 
Sbjct: 9196079 gagctgtcaatggcagcgcggtgctcggtgtattttccattgtattcatacacttccagc 9196020

                                                                           
Query: 325     tcgccccacggggtaggggagatgtcttccgtcatcttgaaccattttggagtgaacttc 384
               |||||||| || ||||||| ||| || || ||| | || |||||| ||||||| || | |
Sbjct: 9196019 tcgccccagggtgtaggggcgatttcatcggtcctgttaaaccatcttggagtaaattgc 9195960

                                                                     
Query: 385     tcccccttggtgtcccggattttcttctcggctcgttgttgttcttcaagcctg 438
               ||||||||||  || ||  || | ||||| |||| |||||| ||||||||||||
Sbjct: 9195959 tcccccttggcctctcgtgttcttttctcagctctttgttgctcttcaagcctg 9195906



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 79      ataacactacaaaggcacgaaaac 102
               |||| |||||||||||||||||||
Sbjct: 9196271 ataatactacaaaggcacgaaaac 9196248



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>gb|AC107315.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0032O19, from chromosome 3, complete sequence
          Length = 142248

 Score =  101 bits (51), Expect = 3e-18
 Identities = 119/142 (83%)
 Strand = Plus / Plus

                                                                         
Query: 454   gatttagacatgtcgcccttctcaagggcatatctgtcgggccttaatcgggagtctgaa 513
             ||||| |||||||| |||||||| ||||||||||| || ||||| ||||||||||| || 
Sbjct: 90606 gattttgacatgtcacccttctcgagggcatatctatcaggcctcaatcgggagtccgat 90665

                                                                         
Query: 514   ggcaagagcttcttangtgctgtatcaaagctatttattttgtgtgcaaagtatgtatac 573
             | ||| ||||||||  | || ||||| ||||| ||||||||||| || ||||  || |||
Sbjct: 90666 gccaatagcttcttcggcgccgtatcgaagctgtttattttgtgcgcgaagtgcgtgtac 90725

                                   
Query: 574   tggtacttgtcactcggtggag 595
             |||||||||||| | |||||||
Sbjct: 90726 tggtacttgtcatttggtggag 90747



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 186/234 (79%), Gaps = 3/234 (1%)
 Strand = Plus / Plus

                                                                         
Query: 205   tactgccacgggttgaactcgatggagctgacgtccgtctcctcggcgacgaccacgcta 264
             ||||||||||||||||| ||||| ||  ||||||| || || ||| || |   ||| || 
Sbjct: 90255 tactgccacgggttgaattcgatcgaagtgacgtctgtatcgtcgtcggc---cacactt 90311

                                                                         
Query: 265   gagctgtctatcgcggcccggtgctcggtgtatctgccgttgtactcgtacacctccagg 324
             |||||||| || || || ||||||||||||||| | || ||||| || ||||| ||||| 
Sbjct: 90312 gagctgtcaatggcagcgcggtgctcggtgtattttccattgtattcatacacttccagc 90371

                                                                         
Query: 325   tcgccccacggggtaggggagatgtcttccgtcatcttgaaccattttggagtgaacttc 384
             |||||||| || ||||||| ||| || || ||| | || |||||| ||||||| || | |
Sbjct: 90372 tcgccccagggtgtaggggcgatttcatcggtcctgttaaaccatcttggagtaaattgc 90431

                                                                   
Query: 385   tcccccttggtgtcccggattttcttctcggctcgttgttgttcttcaagcctg 438
             ||||||||||  || ||  || | ||||| |||| |||||| ||||||||||||
Sbjct: 90432 tcccccttggcctctcgtgttcttttctcagctctttgttgctcttcaagcctg 90485



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 79    ataacactacaaaggcacgaaaac 102
             |||| |||||||||||||||||||
Sbjct: 90120 ataatactacaaaggcacgaaaac 90143



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  101 bits (51), Expect = 3e-18
 Identities = 119/142 (83%)
 Strand = Plus / Minus

                                                                           
Query: 454     gatttagacatgtcgcccttctcaagggcatatctgtcgggccttaatcgggagtctgaa 513
               ||||| |||||||| |||||||| ||||||||||| || ||||| ||||||||||| || 
Sbjct: 9193618 gattttgacatgtcacccttctcgagggcatatctatcaggcctcaatcgggagtccgat 9193559

                                                                           
Query: 514     ggcaagagcttcttangtgctgtatcaaagctatttattttgtgtgcaaagtatgtatac 573
               | ||| ||||||||  | || ||||| ||||| ||||||||||| || ||||  || |||
Sbjct: 9193558 gccaatagcttcttcggcgccgtatcgaagctgtttattttgtgcgcgaagtgcgtgtac 9193499

                                     
Query: 574     tggtacttgtcactcggtggag 595
               |||||||||||| | |||||||
Sbjct: 9193498 tggtacttgtcatttggtggag 9193477



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 186/234 (79%), Gaps = 3/234 (1%)
 Strand = Plus / Minus

                                                                           
Query: 205     tactgccacgggttgaactcgatggagctgacgtccgtctcctcggcgacgaccacgcta 264
               ||||||||||||||||| ||||| ||  ||||||| || || ||| || |   ||| || 
Sbjct: 9193969 tactgccacgggttgaattcgatcgaagtgacgtctgtatcgtcgtcggc---cacactt 9193913

                                                                           
Query: 265     gagctgtctatcgcggcccggtgctcggtgtatctgccgttgtactcgtacacctccagg 324
               |||||||| || || || ||||||||||||||| | || ||||| || ||||| ||||| 
Sbjct: 9193912 gagctgtcaatggcagcgcggtgctcggtgtattttccattgtattcatacacttccagc 9193853

                                                                           
Query: 325     tcgccccacggggtaggggagatgtcttccgtcatcttgaaccattttggagtgaacttc 384
               |||||||| || ||||||| ||| || || ||| | || |||||| ||||||| || | |
Sbjct: 9193852 tcgccccagggtgtaggggcgatttcatcggtcctgttaaaccatcttggagtaaattgc 9193793

                                                                     
Query: 385     tcccccttggtgtcccggattttcttctcggctcgttgttgttcttcaagcctg 438
               ||||||||||  || ||  || | ||||| |||| |||||| ||||||||||||
Sbjct: 9193792 tcccccttggcctctcgtgttcttttctcagctctttgttgctcttcaagcctg 9193739



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 79      ataacactacaaaggcacgaaaac 102
               |||| |||||||||||||||||||
Sbjct: 9194104 ataatactacaaaggcacgaaaac 9194081



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>gb|AY450640.1| Solanum tuberosum oxysterol-binding protein mRNA, complete cds
          Length = 1557

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                 
Query: 523  ttcttangtgctgtatcaaagctatttattttgtgtgcaaagtatgtatactg 575
            |||||| |||| |||||||||||||| || ||||||||||| |||||||||||
Sbjct: 1051 ttcttaggtgcagtatcaaagctattaatcttgtgtgcaaaatatgtatactg 999



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>gb|AC150555.1| Drosophila melanogaster clone BACR26G12, complete sequence
          Length = 164461

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 61    aaaagtggaaagtcatatata 81
             |||||||||||||||||||||
Sbjct: 28931 aaaagtggaaagtcatatata 28951



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>gb|AC007299.18|AC007299 Drosophila melanogaster, chromosome 2L, region 30B-, BAC clone BACR07D23,
              complete sequence
          Length = 176610

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 61     aaaagtggaaagtcatatata 81
              |||||||||||||||||||||
Sbjct: 147680 aaaagtggaaagtcatatata 147660



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>gb|AC084652.1|CBRG45O11 Caenorhabditis briggsae cosmid G45O11, complete sequence
          Length = 26703

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 404  ttttcttctcggctcgttgtt 424
            |||||||||||||||||||||
Sbjct: 9515 ttttcttctcggctcgttgtt 9535



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>gb|AC007257.9|AC007257 Drosophila melanogaster, chromosome 2L, region 30B-, BAC clone BACR24A22,
              complete sequence
          Length = 183007

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 61     aaaagtggaaagtcatatata 81
              |||||||||||||||||||||
Sbjct: 178824 aaaagtggaaagtcatatata 178844



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>gb|AE003625.3| Drosophila melanogaster chromosome 2L, section 34 of 83 of the complete
             sequence
          Length = 271507

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 61    aaaagtggaaagtcatatata 81
             |||||||||||||||||||||
Sbjct: 87881 aaaagtggaaagtcatatata 87861



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>ref|XM_478238.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 414

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 397 tcccggattttcttctcggc 416
           ||||||||||||||||||||
Sbjct: 287 tcccggattttcttctcggc 306



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>ref|XM_472990.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2757

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 508  tctgaaggcaagagcttctt 527
            ||||||||||||||||||||
Sbjct: 1522 tctgaaggcaagagcttctt 1541



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>ref|XM_362059.1| Magnaporthe grisea 70-15 hypothetical protein (MG04504.4) partial
           cds
          Length = 693

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 408 cttctcggctcgttgttgttcttc 431
           ||||||||||||||||||| ||||
Sbjct: 324 cttctcggctcgttgttgtgcttc 301



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>ref|XM_804221.1| Trypanosoma cruzi strain CL Brener protein kinase
           (Tc00.1047053507837.20) partial mRNA
          Length = 1434

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 317 cctccaggtcgccccacggg 336
           ||||||||||||||||||||
Sbjct: 364 cctccaggtcgccccacggg 345



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>ref|XM_804530.1| Trypanosoma cruzi strain CL Brener protein kinase
           (Tc00.1047053508405.70) partial mRNA
          Length = 1434

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 317 cctccaggtcgccccacggg 336
           ||||||||||||||||||||
Sbjct: 364 cctccaggtcgccccacggg 345



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>emb|AL512510.13| Human DNA sequence from clone RP11-537P24 on chromosome 6 Contains a
             CpG island, complete sequence
          Length = 170970

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 542   agctatttattttgtgtgcaaagt 565
             |||||||||| |||||||||||||
Sbjct: 96241 agctatttatgttgtgtgcaaagt 96218



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>ref|XM_792977.1| PREDICTED: Strongylocentrotus purpuratus similar to Mitogen-activated
            protein kinase kinase kinase kinase 5 (MAPK/ERK kinase
            kinase kinase 5) (MEK kinase kinase 5) (MEKKK 5)
            (LOC593505), mRNA
          Length = 2643

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 166  cttcagaccctttgaaatcattgg 189
            |||||| |||||||||||||||||
Sbjct: 1240 cttcagcccctttgaaatcattgg 1217



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>emb|AL354854.8| Human DNA sequence from clone RP11-572H4 on chromosome 9 Contains
             pseudogene similar to part of a novel gene (KIAA1688), a
             solute carrier family 25 (mitochondrial carrier; adenine
             nucleotide translocator), member 6 (SLC25A6) (ANT3)
             pseudogene and a CpG island, complete sequence
          Length = 169550

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 534   tgtatcaaagctatttattt 553
             ||||||||||||||||||||
Sbjct: 11654 tgtatcaaagctatttattt 11673



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>emb|AL731617.3|OSJN00261 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0076N16,
             complete sequence
          Length = 146313

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 508   tctgaaggcaagagcttctt 527
             ||||||||||||||||||||
Sbjct: 78714 tctgaaggcaagagcttctt 78733



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>gb|AC079935.3| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar
             Nipponbare clone OSJNBa0095C06, from Chromosome 10,
             complete sequence
          Length = 156159

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 544   ctatttattttgtgtgcaaa 563
             ||||||||||||||||||||
Sbjct: 43510 ctatttattttgtgtgcaaa 43529



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 508      tctgaaggcaagagcttctt 527
                ||||||||||||||||||||
Sbjct: 24519083 tctgaaggcaagagcttctt 24519102



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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 544      ctatttattttgtgtgcaaa 563
                ||||||||||||||||||||
Sbjct: 11459517 ctatttattttgtgtgcaaa 11459536



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 397      tcccggattttcttctcggc 416
                ||||||||||||||||||||
Sbjct: 18757364 tcccggattttcttctcggc 18757383



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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 465     gtcgcccttctcaagggcat 484
               ||||||||||||||||||||
Sbjct: 3193593 gtcgcccttctcaagggcat 3193574



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>dbj|AP005177.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0055I24
          Length = 155872

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 397   tcccggattttcttctcggc 416
             ||||||||||||||||||||
Sbjct: 89652 tcccggattttcttctcggc 89671



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>dbj|AK069045.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010C01, full
            insert sequence
          Length = 3326

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 508  tctgaaggcaagagcttctt 527
            ||||||||||||||||||||
Sbjct: 1809 tctgaaggcaagagcttctt 1828



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>gb|AC102452.7| Mus musculus chromosome 5, clone RP24-272L20, complete sequence
          Length = 183858

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 544    ctatttattttgtgtgcaaa 563
              ||||||||||||||||||||
Sbjct: 139016 ctatttattttgtgtgcaaa 139035



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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 544      ctatttattttgtgtgcaaa 563
                ||||||||||||||||||||
Sbjct: 11465957 ctatttattttgtgtgcaaa 11465976



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>emb|AL606613.3|OSJN00051 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K20,
              complete sequence
          Length = 116983

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 508    tctgaaggcaagagcttctt 527
              ||||||||||||||||||||
Sbjct: 112405 tctgaaggcaagagcttctt 112424



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>emb|AL807248.7| Mouse DNA sequence from clone RP23-400M20 on chromosome X, complete
              sequence
          Length = 190178

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 170    agaccctttgaaatcattgg 189
              ||||||||||||||||||||
Sbjct: 102734 agaccctttgaaatcattgg 102753


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,326,584
Number of Sequences: 3902068
Number of extensions: 4326584
Number of successful extensions: 82057
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81744
Number of HSP's gapped (non-prelim): 303
length of query: 597
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 574
effective length of database: 17,143,297,704
effective search space: 9840252882096
effective search space used: 9840252882096
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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