ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd26n23 |
|---|---|
| Clone Library Name | barley_pub |
>ICTA_SYNY3 (P27372) Inorganic carbon transport protein| Length = 80 Score = 43.9 bits (102), Expect = 4e-04 Identities = 16/53 (30%), Positives = 32/53 (60%) Frame = -3 Query: 323 IAFFYLFVAPPIIMNWMRLRWFKRKFIETYLQFMFTYLFFPGLMLWAPFVNFR 165 ++ YL V P ++ +++ RW+ +E + + +LFFPGL++ +P +N R Sbjct: 22 LSLAYLLVFPALLYWYLQKRWYVASSVERLVMYFLVFLFFPGLLVLSPVLNLR 74
>LBD18_ARATH (O22131) LOB domain protein 18| Length = 262 Score = 37.4 bits (85), Expect = 0.041 Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 10/87 (11%) Frame = -2 Query: 405 GASPGCSGDGERGGGHRHPGDPAAGGRDRLLLPLRCSPD-----YHELDEAEVVQAQVHR 241 G GC G G GGG G L +C P Y + ++ A VH+ Sbjct: 13 GGGGGCGGGGSSGGGGSSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHK 72 Query: 240 -----DVSAVHVHVPLLPRFDALGTVC 175 +VS + +H+P+ R DA+ T+C Sbjct: 73 VFGASNVSKLLLHIPVHRRSDAVVTIC 99
>WSP1_SCHPO (O36027) Wiskott-Aldrich syndrome homolog protein 1| Length = 574 Score = 37.0 bits (84), Expect = 0.054 Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 3/84 (3%) Frame = -1 Query: 655 PPKASACHQWRSPPHGASSPSRPRCHPLCS*PGGRRRAPGLFNSR---RSPSPGSSAVSM 485 PP+++A PP G S+P P P S P R+ P L +SR P+P + Sbjct: 342 PPRSNAAGSIPLPPQGRSAPPPP---PPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGR 398 Query: 484 TSLSLPPRARSCRSWPPCCSAAPS 413 ++ +LPP + R+ P PS Sbjct: 399 SAPALPPLGNASRTSTPPVPTPPS 422
>YHL1_EBV (P03181) Hypothetical protein BHLF1| Length = 660 Score = 35.0 bits (79), Expect = 0.21 Identities = 25/87 (28%), Positives = 35/87 (40%) Frame = -1 Query: 649 KASACHQWRSPPHGASSPSRPRCHPLCS*PGGRRRAPGLFNSRRSPSPGSSAVSMTSLSL 470 + S + PP PS P GGR APG + +P PG A + + Sbjct: 536 RRSGAQRGHPPPGAGQRPSGPT--------GGRPAAPGAPGTPAAPGPGGGAAVPSGATP 587 Query: 469 PPRARSCRSWPPCCSAAPSGQRCKPRL 389 P S + PP + P +R +PRL Sbjct: 588 HPERGSGPADPPAAARLPP-ERQEPRL 613 Score = 35.0 bits (79), Expect = 0.21 Identities = 25/87 (28%), Positives = 35/87 (40%) Frame = -1 Query: 649 KASACHQWRSPPHGASSPSRPRCHPLCS*PGGRRRAPGLFNSRRSPSPGSSAVSMTSLSL 470 + S + PP PS P GGR APG + +P PG A + + Sbjct: 411 RRSGAQRGHPPPGAGQRPSGPT--------GGRPAAPGAPGTPAAPGPGGGAAVPSGATP 462 Query: 469 PPRARSCRSWPPCCSAAPSGQRCKPRL 389 P S + PP + P +R +PRL Sbjct: 463 HPERGSGPADPPAAARLPP-ERQEPRL 488 Score = 35.0 bits (79), Expect = 0.21 Identities = 25/87 (28%), Positives = 35/87 (40%) Frame = -1 Query: 649 KASACHQWRSPPHGASSPSRPRCHPLCS*PGGRRRAPGLFNSRRSPSPGSSAVSMTSLSL 470 + S + PP PS P GGR APG + +P PG A + + Sbjct: 286 RRSGAQRGHPPPGAGQRPSGPT--------GGRPAAPGAPGTPAAPGPGGGAAVPSGATP 337 Query: 469 PPRARSCRSWPPCCSAAPSGQRCKPRL 389 P S + PP + P +R +PRL Sbjct: 338 HPERGSGPADPPAAARLPP-ERQEPRL 363 Score = 35.0 bits (79), Expect = 0.21 Identities = 25/87 (28%), Positives = 35/87 (40%) Frame = -1 Query: 649 KASACHQWRSPPHGASSPSRPRCHPLCS*PGGRRRAPGLFNSRRSPSPGSSAVSMTSLSL 470 + S + PP PS P GGR APG + +P PG A + + Sbjct: 161 RRSGAQRGHPPPGAGQRPSGPT--------GGRPAAPGAPGTPAAPGPGGGAAVPSGATP 212 Query: 469 PPRARSCRSWPPCCSAAPSGQRCKPRL 389 P S + PP + P +R +PRL Sbjct: 213 HPERGSGPADPPAAARLPP-ERQEPRL 238
>IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2| Length = 969 Score = 34.7 bits (78), Expect = 0.27 Identities = 34/115 (29%), Positives = 41/115 (35%) Frame = -2 Query: 672 GATATCRPKPLPAINGDHRLMALPPRRVLAATRSAPSQAAGVVPLVSSTAGDLQVQDPLP 493 G A+ RP P G P R A SAP A + V+ P P Sbjct: 64 GPAASARPGAKPTPGGPR-----PGPRTPAPAASAPQAPAEQTARPTDARPGPAVK-PGP 117 Query: 492 SP*QAFPYRPELAAAEAGLRVAVRRHLGSGASPGCSGDGERGGGHRHPGDPAAGG 328 +P A P PE AA+A +R G PG + PG PA GG Sbjct: 118 APTPARPAAPEAPAAKAAPEAPAQRPTPGGPRPGQQ--------QQRPGAPAQGG 164
>TWST1_GORGO (Q8MI06) Twist-related protein 1| Length = 203 Score = 34.3 bits (77), Expect = 0.35 Identities = 18/39 (46%), Positives = 21/39 (53%) Frame = -2 Query: 435 RVAVRRHLGSGASPGCSGDGERGGGHRHPGDPAAGGRDR 319 R + RR G GA PG + G GGG PG PA G R + Sbjct: 39 RRSSRRSAGGGAGPGGAASGGAGGGD-EPGSPAQGKRGK 76
>ARHGF_HUMAN (O94989) Rho guanine nucleotide exchange factor 15 (Vsm-RhoGEF)| Length = 841 Score = 34.3 bits (77), Expect = 0.35 Identities = 35/114 (30%), Positives = 40/114 (35%), Gaps = 25/114 (21%) Frame = -1 Query: 655 PPKASACHQWRSPPHGASSPSR----------PRCHPL-CS*PGGRRRAPGL-------- 533 PP S Q PPH SSP P C P+ P + P L Sbjct: 24 PPSRSRAAQSPGPPHNGSSPQELPRNSNDAPTPMCTPIFWEPPAASLKPPALLPPSASRA 83 Query: 532 -FNSRRSP-----SPGSSAVSMTSLSLPPRARSCRSWPPCCSAAPSGQRCKPRL 389 +S+ SP +P S VS S S P RS P PSG C P L Sbjct: 84 SLDSQTSPDSPSSTPTPSPVSRRSASPEPAPRS-----PVPPPKPSGSPCTPLL 132
>TWST1_PONPY (Q8MIB9) Twist-related protein 1| Length = 203 Score = 33.9 bits (76), Expect = 0.46 Identities = 18/39 (46%), Positives = 21/39 (53%) Frame = -2 Query: 435 RVAVRRHLGSGASPGCSGDGERGGGHRHPGDPAAGGRDR 319 R + RR G GA PG + G GGG PG PA G R + Sbjct: 40 RSSSRRSAGGGAGPGGAASGGVGGGD-EPGSPAQGKRGK 77
>HNRLL_MOUSE (Q921F4) Heterogeneous nuclear ribonucleoprotein L-like| Length = 591 Score = 33.9 bits (76), Expect = 0.46 Identities = 22/85 (25%), Positives = 35/85 (41%) Frame = -2 Query: 411 GSGASPGCSGDGERGGGHRHPGDPAAGGRDRLLLPLRCSPDYHELDEAEVVQAQVHRDVS 232 G G G GDG+ GG G + GG + L +H++ + VV R + Sbjct: 78 GEGGEEGDEGDGDEGGSGGDEGG-SGGGPRSMPLSTEGGGSHHKVSVSPVVHV---RGLC 133 Query: 231 AVHVHVPLLPRFDALGTVCQLQKVP 157 V L+ + GT+C + +P Sbjct: 134 ESVVEADLVEALEKFGTICYVMMMP 158
>HCN2_RAT (Q9JKA9) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 2 Length = 863 Score = 33.5 bits (75), Expect = 0.60 Identities = 30/86 (34%), Positives = 33/86 (38%), Gaps = 3/86 (3%) Frame = -1 Query: 664 GHLPPKASACHQWRSPPHGASSPSRPRCHPLCS*PGGRRRAPGLFNSRRSPSPGSSAVSM 485 G LPP AS SPP SSP PR P PG G R S S +S Sbjct: 736 GPLPPAASPGPPAASPPAAPSSPRAPRTSPY-GVPGSPATRVGPALPARRLSRASRPLSA 794 Query: 484 TSLSLP---PRARSCRSWPPCCSAAP 416 + SLP P S P S+ P Sbjct: 795 SQPSLPHGAPAPSPAASARPASSSTP 820
>HCN2_MOUSE (O88703) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 2 (Brain cyclic nucleotide gated channel 2) (BCNG-2) (Hyperpolarization-activated cation channel 1) (HAC-1) Length = 863 Score = 33.5 bits (75), Expect = 0.60 Identities = 30/86 (34%), Positives = 33/86 (38%), Gaps = 3/86 (3%) Frame = -1 Query: 664 GHLPPKASACHQWRSPPHGASSPSRPRCHPLCS*PGGRRRAPGLFNSRRSPSPGSSAVSM 485 G LPP AS SPP SSP PR P PG G R S S +S Sbjct: 736 GPLPPAASPGPPAASPPAAPSSPRAPRTSPY-GVPGSPATRVGPALPARRLSRASRPLSA 794 Query: 484 TSLSLP---PRARSCRSWPPCCSAAP 416 + SLP P S P S+ P Sbjct: 795 SQPSLPHGVPAPSPAASARPASSSTP 820
>TWST1_PANTR (Q8MI03) Twist-related protein 1| Length = 201 Score = 33.1 bits (74), Expect = 0.78 Identities = 18/39 (46%), Positives = 21/39 (53%) Frame = -2 Query: 435 RVAVRRHLGSGASPGCSGDGERGGGHRHPGDPAAGGRDR 319 R + RR G GA PG + G GGG PG PA G R + Sbjct: 39 RRSSRRSAGGGAGPGGAAGGGVGGGD-EPGSPAQGKRGK 76
>TWST1_MACTO (Q7JGP2) Twist-related protein 1| Length = 201 Score = 33.1 bits (74), Expect = 0.78 Identities = 18/39 (46%), Positives = 21/39 (53%) Frame = -2 Query: 435 RVAVRRHLGSGASPGCSGDGERGGGHRHPGDPAAGGRDR 319 R + RR G GA PG + G GGG PG PA G R + Sbjct: 39 RRSSRRSAGGGAGPGGAAGGGVGGGD-EPGSPAQGKRGK 76
>TWST1_HUMAN (Q15672) Twist-related protein 1 (H-twist)| Length = 202 Score = 33.1 bits (74), Expect = 0.78 Identities = 18/39 (46%), Positives = 21/39 (53%) Frame = -2 Query: 435 RVAVRRHLGSGASPGCSGDGERGGGHRHPGDPAAGGRDR 319 R + RR G GA PG + G GGG PG PA G R + Sbjct: 39 RRSSRRSAGGGAGPGGAAGGGVGGGD-EPGSPAQGKRGK 76
>TWST1_CALJA (Q8MIH1) Twist-related protein 1| Length = 203 Score = 33.1 bits (74), Expect = 0.78 Identities = 18/39 (46%), Positives = 21/39 (53%) Frame = -2 Query: 435 RVAVRRHLGSGASPGCSGDGERGGGHRHPGDPAAGGRDR 319 R + RR G GA PG + G GGG PG PA G R + Sbjct: 39 RRSSRRSAGGGAGPGGAAGGGVGGGD-EPGSPAQGKRGK 76
>SOCS7_MOUSE (Q8VHQ2) Suppressor of cytokine signaling 7 (SOCS-7)| Length = 579 Score = 33.1 bits (74), Expect = 0.78 Identities = 30/96 (31%), Positives = 41/96 (42%), Gaps = 1/96 (1%) Frame = -2 Query: 618 RLMALPPRRVLAATRSAPSQAAGVVPLVSSTAGDLQVQDPLPSP*QAFPYRPELAAAEAG 439 RL+ PP L P +VP + G+ Q Q P P P P RP + G Sbjct: 150 RLLLQPPGPELPPV---PFPLQDLVPPGRLSRGEQQQQQPPPPPPPPGPLRPLAGPSRKG 206 Query: 438 -LRVAVRRHLGSGASPGCSGDGERGGGHRHPGDPAA 334 ++ + R + + G SG G+ G G R GD AA Sbjct: 207 SFKIRLSRLFRTKSCNGGSGGGD-GTGKRPSGDLAA 241
>CWC21_USTMA (Q4P0G6) Pre-mRNA-splicing factor CWC21| Length = 348 Score = 33.1 bits (74), Expect = 0.78 Identities = 28/92 (30%), Positives = 38/92 (41%), Gaps = 2/92 (2%) Frame = -1 Query: 661 HLPPKASACHQWRSPPHGASSPSRPRCHPLCS*PGGRRRAPGLFNSRRSPSP--GSSAVS 488 H P + S+ H + SSP R R + R+ S RSP+P S S Sbjct: 194 HPPARCSSTHSQSTSSSSPSSPPRKRARSRSASQDSSARSSSSHASPRSPTPRTTSHVAS 253 Query: 487 MTSLSLPPRARSCRSWPPCCSAAPSGQRCKPR 392 +S S R+RS RS P + S R + R Sbjct: 254 YSSYSSRSRSRS-RSRSPLSHSRSSRSRSRSR 284
>TWST1_HYLCO (Q8MIE7) Twist-related protein 1| Length = 204 Score = 33.1 bits (74), Expect = 0.78 Identities = 18/39 (46%), Positives = 21/39 (53%) Frame = -2 Query: 435 RVAVRRHLGSGASPGCSGDGERGGGHRHPGDPAAGGRDR 319 R + RR G GA PG + G GGG PG PA G R + Sbjct: 39 RRSSRRSAGGGAGPGGAAGGGVGGGD-EPGSPAQGKRGK 76
>SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1| (Ser/Arg-related nuclear matrix protein) (SR-related nuclear matrix protein of 160 kDa) (SRm160) Length = 904 Score = 32.7 bits (73), Expect = 1.0 Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 2/79 (2%) Frame = -1 Query: 625 RSPPHGASSPSRPRCHPLCS*PGGRRRAPG--LFNSRRSPSPGSSAVSMTSLSLPPRARS 452 R P ++SPS + S G RRR+P RRSPSP + + PPR R+ Sbjct: 522 RHSPSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRT 581 Query: 451 CRSWPPCCSAAPSGQRCKP 395 PP +PS +R P Sbjct: 582 --PSPPPRRRSPSPRRYSP 598
>UL61_HCMVA (P16818) Hypothetical protein UL61| Length = 431 Score = 32.7 bits (73), Expect = 1.0 Identities = 38/125 (30%), Positives = 50/125 (40%), Gaps = 14/125 (11%) Frame = -2 Query: 654 RPKPLPAINGDHR----LMALPPRRVLAATRSAPSQAA------GVVPLVS-STAGDLQV 508 RP P P+ +R A P R+ A S+A G P+ T+ V Sbjct: 163 RPSPPPSTRPTYRRRRPTAATPSRKKKARRGPKASKAGREGELGGGSPVAHRGTSLGTGV 222 Query: 507 QDPLPSP*QAFPYRPELAAAEAGLRVAVRRHLGSGASPGCSGDGERGGGHRHP-GDPAA- 334 +DP P + P + AG + RR G+ PG ERGGG + P G P A Sbjct: 223 RDPAPRGGRGRARTPGPVHSAAGGPGSRRRSPGAARDPGPEPGEERGGGGKPPLGSPRAT 282 Query: 333 -GGRD 322 G RD Sbjct: 283 DGNRD 287
>PRTP_TUHV2 (Q9WRL6) Probable processing and transport protein| Length = 782 Score = 32.3 bits (72), Expect = 1.3 Identities = 37/137 (27%), Positives = 56/137 (40%), Gaps = 3/137 (2%) Frame = -2 Query: 468 RPELAAAEAGLRVAVRRHLGSGASPGCSGD-GERGGGHRHPGDPAAGGRDRLLLPLRCSP 292 R AA AG R A G+ A+ G + GE GG GDPAA D ++ + Sbjct: 417 RGAAAATAAGARGAAEGTGGAAAAGGAAAAAGEAAGGPFQCGDPAARAHD-VVREVHVRK 475 Query: 291 DYHELDEAEVVQAQVHRDVSAVHVHVPLLPRFDALGTVC--QLQKVPKG*NHEVPLVQTE 118 + +E+ +V + + + L + LGTVC L KV G ++ Sbjct: 476 KAYLQKVSELGYNRVMQCIKGQEKLIKKLVNVNLLGTVCFEVLAKVING------FIRRR 529 Query: 117 GRHPSVQGQIPTNRLIQ 67 V G + +RL+Q Sbjct: 530 AYLERVDGVVDVDRLLQ 546
>RP1L1_HUMAN (Q8IWN7) Retinitis pigmentosa 1-like 1 protein| Length = 2480 Score = 32.3 bits (72), Expect = 1.3 Identities = 27/84 (32%), Positives = 33/84 (39%), Gaps = 2/84 (2%) Frame = -1 Query: 652 PKASACHQWRSPPHGASSPSRPRCHPLCS*PGGRRRAPGLFNSRRSPSPGSSAVSMTSLS 473 P + Q P GA P R C CS PG + ++R PSP +S + Sbjct: 802 PSSPLVLQVGRPEQGAVGPHRSHC---CSQPGTQPAQ----EAQRGPSPEASWLCGRYCP 854 Query: 472 LPPRARSC--RSWPPCCSAAPSGQ 407 PPR R C R C S S Q Sbjct: 855 TPPRGRPCPQRRSSSCGSTGSSHQ 878
>DXS1_STRCO (Q9X7W3) 1-deoxy-D-xylulose-5-phosphate synthase 1 (EC 2.2.1.7)| (1-deoxyxylulose-5-phosphate synthase 1) (DXP synthase 1) (DXPS 1) Length = 656 Score = 32.3 bits (72), Expect = 1.3 Identities = 34/114 (29%), Positives = 45/114 (39%), Gaps = 8/114 (7%) Frame = -2 Query: 624 DHRLMALPPRRVLAATRSAPSQAAGVVPLVSSTAGDLQVQDP-----LPSP*QAFPYRPE 460 D L L R L A S+AAGV V+ GD +V P +P A R E Sbjct: 540 DPALAPLAARHRLVAVVEDNSRAAGVGSAVALALGDAEVDVPVRRFGIPEQFLAHAKRAE 599 Query: 459 LAAAEAGLRVAVRRHLGSG---ASPGCSGDGERGGGHRHPGDPAAGGRDRLLLP 307 + A V V + + A P +GD G PGD G R+++P Sbjct: 600 VLADIGLTPVDVAGRIAASLALAEP--AGDRAGGPAVEQPGDGRMSGDGRIVMP 651
>PHF2_MOUSE (Q9WTU0) PHD finger protein 2 (GRC5)| Length = 1096 Score = 32.3 bits (72), Expect = 1.3 Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 5/87 (5%) Frame = +3 Query: 126 GPRVLHG-FIPWE----LSEVDKRCPEHQTGEEEVREHELQIRLDELALEPPQPHPVHDN 290 G ++L+G F W L+E + PEH + +++ +IRL E A + +P + Sbjct: 398 GAKILNGAFRSWTKKQALAEHEDELPEHFRPSQLIKDLAKEIRLSENASKTVRPEV--NA 455 Query: 291 RGSNEEVEEGDRGHRRQDPQDVDVLLP 371 S++EV +GDR + + P V+ P Sbjct: 456 AASSDEVCDGDR-EKEEPPSPVETTPP 481
>NOG2_CRYGA (Q6TGJ8) Nucleolar GTP-binding protein 2| Length = 731 Score = 32.0 bits (71), Expect = 1.7 Identities = 23/67 (34%), Positives = 31/67 (46%) Frame = +3 Query: 159 ELSEVDKRCPEHQTGEEEVREHELQIRLDELALEPPQPHPVHDNRGSNEEVEEGDRGHRR 338 E+ + DK E + EEE + + +ELA E P D EEVEE D+ Sbjct: 587 EVVDQDKEMVEKEEEEEEEEDEDEDEEEEELAWEDVFPEEA-DAVDGGEEVEESDK-EET 644 Query: 339 QDPQDVD 359 D +DVD Sbjct: 645 DDEEDVD 651
>TWST1_MOUSE (P26687) Twist-related protein 1 (M-twist)| Length = 206 Score = 32.0 bits (71), Expect = 1.7 Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 2/54 (3%) Frame = -2 Query: 474 PYRPELAAAEAGLRV--AVRRHLGSGASPGCSGDGERGGGHRHPGDPAAGGRDR 319 P R + A+ + G R + RR G A PG + G GGG PG PA G R + Sbjct: 24 PDRQQPASGKRGARKRRSSRRSAGGSAGPGGATGGGIGGGD-EPGSPAQGKRGK 76
>CF001_HUMAN (Q86T20) Protein C6orf1 precursor| Length = 159 Score = 32.0 bits (71), Expect = 1.7 Identities = 29/82 (35%), Positives = 34/82 (41%), Gaps = 15/82 (18%) Frame = -1 Query: 664 GHLPPKASACHQWRSP------PHGASSPSRPR-------CH--PLCS*PGGRRRAPGLF 530 G + S CH W S PH PS P CH PL S PG GL Sbjct: 47 GRVATSTSGCHCWMSRRDLTPLPH----PSEPGVLDCLGPCHLLPLLS-PGSPCWVLGLH 101 Query: 529 NSRRSPSPGSSAVSMTSLSLPP 464 S PS S++ ++T SLPP Sbjct: 102 FSLHPPSAASASHALTITSLPP 123
>PHF2_HUMAN (O75151) PHD finger protein 2 (GRC5)| Length = 1101 Score = 32.0 bits (71), Expect = 1.7 Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 5/87 (5%) Frame = +3 Query: 126 GPRVLHG-FIPWE----LSEVDKRCPEHQTGEEEVREHELQIRLDELALEPPQPHPVHDN 290 G ++L+G F W L+E + PEH + +++ +IRL E A + +P + Sbjct: 398 GAKILNGAFRSWTKKQALAEHEDELPEHFKPSQLIKDLAKEIRLSENASKAVRPEV--NT 455 Query: 291 RGSNEEVEEGDRGHRRQDPQDVDVLLP 371 S++EV +GDR + + P ++ P Sbjct: 456 VASSDEVCDGDR-EKEEPPSPIEATPP 481
>YRA1_YEAST (Q12159) RNA annealing protein YRA1| Length = 226 Score = 32.0 bits (71), Expect = 1.7 Identities = 32/115 (27%), Positives = 48/115 (41%), Gaps = 8/115 (6%) Frame = -2 Query: 609 ALPPRR--VLAATRSAPSQAAGVVPLVSSTAGDLQVQDPLPSP*QAFPYRPELAAAEAGL 436 +LP RR + TR+ P+ A V L+ +T + LP + R A+ G+ Sbjct: 46 SLPNRRGPIRKNTRAPPNAVARVAKLLDTTREVKVNVEGLPRDIKQDAVREFFASQVGGV 105 Query: 435 RVAVRRHLGSGASPGCS------GDGERGGGHRHPGDPAAGGRDRLLLPLRCSPD 289 + + + G S G + G+ R R G P GGR RL L L P+ Sbjct: 106 QRVLLSYNERGQSTGMANITFKNGELARRAVERFNGSPIDGGRSRLRLNLIVDPN 160
>MYSB_ACACA (P19706) Myosin heavy chain IB (Myosin heavy chain IL)| Length = 1147 Score = 27.7 bits (60), Expect(2) = 1.8 Identities = 12/28 (42%), Positives = 13/28 (46%) Frame = -2 Query: 414 LGSGASPGCSGDGERGGGHRHPGDPAAG 331 +G PG G G G G PG P AG Sbjct: 1012 MGGPGGPGRGGPGGPGAGRGGPGGPGAG 1039 Score = 22.7 bits (47), Expect(2) = 1.8 Identities = 18/54 (33%), Positives = 22/54 (40%) Frame = -1 Query: 664 GHLPPKASACHQWRSPPHGASSPSRPRCHPLCS*PGGRRRAPGLFNSRRSPSPG 503 G+ P A A + P A+ PS R P PG R PG+ R P G Sbjct: 950 GYSQPVAQAQPVAQVPQPVAAVPSAGRGGPGMGGPGAGRGGPGM--GRGGPGMG 1001
>IF2_STRAW (Q82K53) Translation initiation factor IF-2| Length = 1046 Score = 26.6 bits (57), Expect(2) = 1.8 Identities = 17/49 (34%), Positives = 17/49 (34%) Frame = -2 Query: 474 PYRPELAAAEAGLRVAVRRHLGSGASPGCSGDGERGGGHRHPGDPAAGG 328 P RP G R G G G G G R GG G P GG Sbjct: 311 PQRPAAGPRPGGGGPGGRGPGGGGRPGGPGGGGGRPGGGGFAGRPGGGG 359 Score = 23.9 bits (50), Expect(2) = 1.8 Identities = 14/40 (35%), Positives = 16/40 (40%) Frame = -1 Query: 625 RSPPHGASSPSRPRCHPLCS*PGGRRRAPGLFNSRRSPSP 506 R P G P PR PGG R PG+ R + P Sbjct: 282 RPTPGGMPRPQAPRPGGA---PGGNRPNPGMMPQRPAAGP 318
>SSR2_BOVIN (P34993) Somatostatin receptor type 2 (SS2R) (SRIF-1)| Length = 368 Score = 31.6 bits (70), Expect = 2.3 Identities = 19/62 (30%), Positives = 29/62 (46%) Frame = -3 Query: 353 ILGILPPVAAIAFFYLFVAPPIIMNWMRLRWFKRKFIETYLQFMFTYLFFPGLMLWAPFV 174 ILG L P+ I YLF+ + + +R+ KRK E + M + + + W PF Sbjct: 213 ILGFLVPLTIICLCYLFIIIKVKSSGIRVGSSKRKKSEKKVTRMVSIVVAVFIFCWLPFY 272 Query: 173 NF 168 F Sbjct: 273 IF 274
>SSR2_RAT (P30680) Somatostatin receptor type 2 (SS2R) (SRIF-1)| Length = 369 Score = 31.6 bits (70), Expect = 2.3 Identities = 19/62 (30%), Positives = 29/62 (46%) Frame = -3 Query: 353 ILGILPPVAAIAFFYLFVAPPIIMNWMRLRWFKRKFIETYLQFMFTYLFFPGLMLWAPFV 174 ILG L P+ I YLF+ + + +R+ KRK E + M + + + W PF Sbjct: 214 ILGFLVPLTIICLCYLFIIIKVKSSGIRVGSSKRKKSEKKVTRMVSIVVAVFIFCWLPFY 273 Query: 173 NF 168 F Sbjct: 274 IF 275
>SSR2_PIG (P34994) Somatostatin receptor type 2 (SS2R) (SRIF-1)| Length = 369 Score = 31.6 bits (70), Expect = 2.3 Identities = 19/62 (30%), Positives = 29/62 (46%) Frame = -3 Query: 353 ILGILPPVAAIAFFYLFVAPPIIMNWMRLRWFKRKFIETYLQFMFTYLFFPGLMLWAPFV 174 ILG L P+ I YLF+ + + +R+ KRK E + M + + + W PF Sbjct: 214 ILGFLVPLTIICLCYLFIIIKVKSSGIRVGSSKRKKSEKKVTRMVSIVVAVFIFCWLPFY 273 Query: 173 NF 168 F Sbjct: 274 IF 275
>SSR2_MOUSE (P30875) Somatostatin receptor type 2 (SS2R) (SRIF-1)| Length = 369 Score = 31.6 bits (70), Expect = 2.3 Identities = 19/62 (30%), Positives = 29/62 (46%) Frame = -3 Query: 353 ILGILPPVAAIAFFYLFVAPPIIMNWMRLRWFKRKFIETYLQFMFTYLFFPGLMLWAPFV 174 ILG L P+ I YLF+ + + +R+ KRK E + M + + + W PF Sbjct: 214 ILGFLVPLTIICLCYLFIIIKVKSSGIRVGSSKRKKSEKKVTRMVSIVVAVFIFCWLPFY 273 Query: 173 NF 168 F Sbjct: 274 IF 275
>SSR2_HUMAN (P30874) Somatostatin receptor type 2 (SS2R) (SRIF-1)| Length = 369 Score = 31.6 bits (70), Expect = 2.3 Identities = 19/62 (30%), Positives = 29/62 (46%) Frame = -3 Query: 353 ILGILPPVAAIAFFYLFVAPPIIMNWMRLRWFKRKFIETYLQFMFTYLFFPGLMLWAPFV 174 ILG L P+ I YLF+ + + +R+ KRK E + M + + + W PF Sbjct: 214 ILGFLVPLTIICLCYLFIIIKVKSSGIRVGSSKRKKSEKKVTRMVSIVVAVFIFCWLPFY 273 Query: 173 NF 168 F Sbjct: 274 IF 275
>ICP0_BHV1J (P29128) Trans-acting transcriptional protein ICP0 (P135 protein)| (IER 2.9/ER2.6) Length = 676 Score = 31.6 bits (70), Expect = 2.3 Identities = 22/64 (34%), Positives = 27/64 (42%) Frame = -2 Query: 582 ATRSAPSQAAGVVPLVSSTAGDLQVQDPLPSP*QAFPYRPELAAAEAGLRVAVRRHLGSG 403 A SAPS A V +STA + + P PSP P A L A R +G Sbjct: 537 ARSSAPSPA--VTAAATSTAAAISTRAPTPSPAGRAPAADPRRAGAPALAGAARAEVGRN 594 Query: 402 ASPG 391 +PG Sbjct: 595 GNPG 598
>FUBP2_RAT (Q99PF5) Far upstream element-binding protein 2 (FUSE-binding| protein 2) (KH type splicing regulatory protein) (KSRP) (MAP2 RNA trans-acting protein 1) (MARTA1) Length = 721 Score = 31.6 bits (70), Expect = 2.3 Identities = 14/28 (50%), Positives = 15/28 (53%) Frame = -2 Query: 411 GSGASPGCSGDGERGGGHRHPGDPAAGG 328 G G PG G G+RGGG G P GG Sbjct: 27 GGGPPPGPPGAGDRGGGGPGGGGPGGGG 54
>SSR4_MOUSE (P49660) Somatostatin receptor type 4 (SS4R)| Length = 384 Score = 31.6 bits (70), Expect = 2.3 Identities = 17/59 (28%), Positives = 28/59 (47%) Frame = -3 Query: 353 ILGILPPVAAIAFFYLFVAPPIIMNWMRLRWFKRKFIETYLQFMFTYLFFPGLMLWAPF 177 +LG LPPV AI YL + + +R W +R+ E + + + ++ W PF Sbjct: 213 LLGFLPPVLAIGLCYLLIVGKMRAVALRGGWQQRRRSEKKITRLVLMVVTVFVLCWMPF 271
>ZIC5_HUMAN (Q96T25) Zinc finger protein ZIC 5 (Zinc finger protein of the| cerebellum 5) Length = 639 Score = 31.2 bits (69), Expect = 3.0 Identities = 37/115 (32%), Positives = 47/115 (40%), Gaps = 6/115 (5%) Frame = -2 Query: 663 ATCRPKPLPAINGDHRLMALPPRRVL-AATRSAPSQAAGVVPLVSSTA-GDLQVQDP--- 499 AT + +PL + G L P L AA + G P V++T G + Sbjct: 19 ATAQVQPLQNMTGFPALAGPPAHSQLRAAVAHLRLRDLGADPGVATTPLGPEHMAQASTL 78 Query: 498 -LPSP*QAFPYRPELAAAEAGLRVAVRRHLGSGASPGCSGDGERGGGHRHPGDPA 337 L P QAFP PE A A A A+ H G+G+ P G G G P PA Sbjct: 79 GLSPPSQAFPAHPE-APAAAARAAALVAHPGAGSYP--CGGGSSGAQPSAPPPPA 130
>CENG1_HUMAN (Q99490) Centaurin-gamma 1 (ARF-GAP with GTP-binding protein-like,| ankyrin repeat and pleckstrin homology domains 2) (AGAP-2) (Phosphatidylinositol-3-kinase enhancer) (PIKE) (GTP-binding and GTPase activating protein 2) (GGAP2) Length = 1192 Score = 31.2 bits (69), Expect = 3.0 Identities = 28/91 (30%), Positives = 37/91 (40%), Gaps = 5/91 (5%) Frame = -1 Query: 622 SPPHGASSPSRPRCHPLCS*P--GGRR---RAPGLFNSRRSPSPGSSAVSMTSLSLPPRA 458 S P GA S SR PL S P GG R G SP PG+ + + PP Sbjct: 131 SKPGGAPSSSR---RPLLSSPSWGGPEPEGRTGGGVPGSSSPHPGTGSRRLKVAPPPPAP 187 Query: 457 RSCRSWPPCCSAAPSGQRCKPRLLWRR*AGR 365 + C++ + A G+ RL W G+ Sbjct: 188 KPCKTVTTSGAKAGGGKGAGSRLSWPESEGK 218
>WIRE_HUMAN (Q8TF74) WIP-related protein (WASP-interacting protein-related| protein) (WIP-and CR16-homologous protein) Length = 440 Score = 31.2 bits (69), Expect = 3.0 Identities = 23/69 (33%), Positives = 29/69 (42%) Frame = -1 Query: 622 SPPHGASSPSRPRCHPLCS*PGGRRRAPGLFNSRRSPSPGSSAVSMTSLSLPPRARSCRS 443 S P S+P P+ H R+ PG P P S++ S+ S PP AR Sbjct: 266 SSPTNESAPELPQRHNSL-----HRKTPGPVRGLAPPPPTSASPSLLSNRPPPPARD--- 317 Query: 442 WPPCCSAAP 416 PP AAP Sbjct: 318 -PPSRGAAP 325
>TWST1_EULFU (Q8MIF3) Twist-related protein 1| Length = 198 Score = 30.8 bits (68), Expect = 3.9 Identities = 17/39 (43%), Positives = 20/39 (51%) Frame = -2 Query: 435 RVAVRRHLGSGASPGCSGDGERGGGHRHPGDPAAGGRDR 319 R + RR G GA PG + G GG PG PA G R + Sbjct: 39 RRSSRRSAGGGAGPGGAAGGVGGGD--EPGSPAQGKRGK 75
>SMAD7_HUMAN (O15105) Mothers against decapentaplegic homolog 7 (SMAD 7)| (Mothers against DPP homolog 7) (Smad7) (hSMAD7) Length = 426 Score = 30.8 bits (68), Expect = 3.9 Identities = 17/36 (47%), Positives = 17/36 (47%), Gaps = 5/36 (13%) Frame = -2 Query: 423 RRHLGSGASPG----CSGDGERGG-GHRHPGDPAAG 331 R H G PG C G RG GH HP PAAG Sbjct: 46 RAHGAGGGGPGRAGCCLGKAVRGAKGHHHPHPPAAG 81
>PRD13_HUMAN (Q9H4Q3) PR domain zinc finger protein 13 (PR domain-containing| protein 13) Length = 717 Score = 30.8 bits (68), Expect = 3.9 Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 4/45 (8%) Frame = -2 Query: 474 PYRPELAAAEAGLRVAVRRHLGSGASPGCSGDGER----GGGHRH 352 PYR E ++++ G +A+ R LG G + G G GE G GH H Sbjct: 321 PYREE-SSSKQGAGLALGRLLGGGRACGRPGSGENSAAGGAGHHH 364
>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1| Length = 888 Score = 30.8 bits (68), Expect = 3.9 Identities = 34/98 (34%), Positives = 42/98 (42%), Gaps = 3/98 (3%) Frame = -1 Query: 673 RRHGHLPPKASACHQWRSPPHGASSPSRPRCHPLCS*PGGRRRAPGLFNSRRSPSPGSSA 494 RR PP A + RSP S P PR S P RRR+P RRSPSP + Sbjct: 540 RRRSPSPPPA---RRRRSP----SPPPPPRRRRSPSLP--RRRSPSPPPRRRSPSPRRYS 590 Query: 493 VSMT---SLSLPPRARSCRSWPPCCSAAPSGQRCKPRL 389 + S S PP+ R+ PP A + K R+ Sbjct: 591 PPIQRRYSPSPPPKRRTASPPPPPKRRASPSPQSKRRV 628
>ALF1_PORGI (P60053) Fructose-bisphosphate aldolase class 1 (EC 4.1.2.13)| (Fructose-biphosphate aldolase class I) (FBP aldolase) Length = 293 Score = 30.8 bits (68), Expect = 3.9 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%) Frame = +3 Query: 93 VLEQRGAFLRFGPRVL-HGFIPWELSEVDKRCPEHQTGEEEVREHELQIRLDEL 251 ++EQ+ ++G +L HG +P EVD CPE + EE+ + EL +LD++ Sbjct: 155 IVEQQ---FQWGKEILSHGLVPILEPEVDIHCPE-KAKAEEILKRELLAQLDKM 204
>WIRE_MOUSE (Q6PEV3) WIP-related protein (WASP-interacting protein-related| protein) Length = 440 Score = 30.8 bits (68), Expect = 3.9 Identities = 23/69 (33%), Positives = 28/69 (40%) Frame = -1 Query: 622 SPPHGASSPSRPRCHPLCS*PGGRRRAPGLFNSRRSPSPGSSAVSMTSLSLPPRARSCRS 443 S P S+P P+ H R+ PG P P S+ S+ S PP AR Sbjct: 266 SSPTNESAPELPQRHNSL-----HRKTPGPVRGLAPPPPTSATPSLLSNRPPPPARE--- 317 Query: 442 WPPCCSAAP 416 PP AAP Sbjct: 318 -PPSRGAAP 325
>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1| (Plenty-of-prolines 101) Length = 946 Score = 30.8 bits (68), Expect = 3.9 Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 2/72 (2%) Frame = -1 Query: 670 RHGHLPPKASACHQWRSP-PHGASSPS-RPRCHPLCS*PGGRRRAPGLFNSRRSPSPGSS 497 R G P +++ + RSP P+ SPS RPR S P RR A R+SPSP + Sbjct: 680 RKGSSPGRST--REARSPQPNKRHSPSPRPRAPQTSSPPPVRRGASASPQGRQSPSPSTR 737 Query: 496 AVSMTSLSLPPR 461 + S + P+ Sbjct: 738 PIRRVSRTPEPK 749 Score = 30.0 bits (66), Expect = 6.6 Identities = 24/65 (36%), Positives = 28/65 (43%), Gaps = 3/65 (4%) Frame = -1 Query: 619 PPHGASSPSRPRCHPLCS*PGGRRRAPGLFNSRRSPSPGSSAVSMT---SLSLPPRARSC 449 PP P R R P P RRR P RRSPSP + + S S PP+ R+ Sbjct: 578 PPPPPPPPPRRRRSPT---PPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTA 634 Query: 448 RSWPP 434 PP Sbjct: 635 SPPPP 639 Score = 29.6 bits (65), Expect = 8.7 Identities = 34/111 (30%), Positives = 44/111 (39%), Gaps = 21/111 (18%) Frame = -1 Query: 673 RRHGHLPPKASACHQWRSPPHGASSPSRPRCHPLCS*PGGRRRAPGLFNSRRSPS----- 509 RR+ PP PP +SPS P + P ++R+P + RRSPS Sbjct: 621 RRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSPTV-TKRRSPSLSSKH 679 Query: 508 -PGSSAVSMT------------SLSLPPRARSCRSWPPC---CSAAPSGQR 404 GSS T S S PRA S PP SA+P G++ Sbjct: 680 RKGSSPGRSTREARSPQPNKRHSPSPRPRAPQTSSPPPVRRGASASPQGRQ 730
>ETV2_MOUSE (P41163) ETS translocation variant 2 (Ets-related protein 71)| Length = 335 Score = 30.8 bits (68), Expect = 3.9 Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Frame = -1 Query: 562 PGGRRRAPGL-FNSRRSPSPGSSAVSMTSLSLPPRARSCRSWPPCCSAAPSG 410 P G +P + F +P +SA + S S PP A S SW CS PSG Sbjct: 107 PPGTSPSPFVGFEGATGQNPATSAGGVPSWSHPPAAWSTTSWD--CSVGPSG 156
>SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1| Length = 917 Score = 30.8 bits (68), Expect = 3.9 Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 2/72 (2%) Frame = -1 Query: 670 RHGHLPPKASACHQWRSP-PHGASSPS-RPRCHPLCS*PGGRRRAPGLFNSRRSPSPGSS 497 R G P +++ + RSP P+ SPS RPR S P RR A R+SPSP + Sbjct: 675 RKGSSPSRST--REARSPQPNKRHSPSPRPRAPQTSSPPPVRRGASSSPQRRQSPSPSTR 732 Query: 496 AVSMTSLSLPPR 461 + S + P+ Sbjct: 733 PIRRVSRTPEPK 744
>DPY13_CAEEL (P17657) Cuticle collagen dpy-13 (Protein dumpy-13)| Length = 302 Score = 26.6 bits (57), Expect(2) = 4.2 Identities = 16/40 (40%), Positives = 18/40 (45%) Frame = -2 Query: 411 GSGASPGCSGDGERGGGHRHPGDPAAGGRDRLLLPLRCSP 292 GS A+PG G G PG P A G + LP C P Sbjct: 178 GSDAAPGEQGPKGPNGAPGKPGAPGAPGDEG--LPAVCEP 215 Score = 22.7 bits (47), Expect(2) = 4.2 Identities = 24/91 (26%), Positives = 29/91 (31%), Gaps = 5/91 (5%) Frame = -1 Query: 664 GHLPPKASACHQWRSP-PHGA----SSPSRPRCHPLCS*PGGRRRAPGLFNSRRSPSPGS 500 G+ P S C P P GA P RP G+ APG +PG Sbjct: 90 GNGPNFDSGCEGCCQPGPQGAPGAPGKPGRP----------GKPGAPGF-----PGNPGK 134 Query: 499 SAVSMTSLSLPPRARSCRSWPPCCSAAPSGQ 407 + PP + C PP P Q Sbjct: 135 APQKPCEEITPPPCKPCPQGPPGAPGLPGDQ 165
>FTSK_CHLPN (Q9Z726) DNA translocase ftsK| Length = 806 Score = 30.4 bits (67), Expect = 5.1 Identities = 23/76 (30%), Positives = 31/76 (40%), Gaps = 15/76 (19%) Frame = -3 Query: 335 PVAAIAFFYLFVA-------------PPIIMNWMRLRWFKRKFIETYLQFMF--TYLFFP 201 P+AA A YLF A P NW+ L + ++L + F F P Sbjct: 17 PLAAKASLYLFFACFSGLSLWSFHRDQPCTQNWIGLLGWS---FSSFLLYFFGAAAFFIP 73 Query: 200 GLMLWAPFVNFRKFPR 153 LW F+ FR+ PR Sbjct: 74 LYFLWLSFLYFRRTPR 89
>IF2_PELLD (Q3B1Z8) Translation initiation factor IF-2| Length = 915 Score = 30.4 bits (67), Expect = 5.1 Identities = 24/76 (31%), Positives = 32/76 (42%), Gaps = 2/76 (2%) Frame = -2 Query: 663 ATCRPKPLPAINGDHRLMALPPRRVLAATRSAPSQAAGVVPLVS--STAGDLQVQDPLPS 490 A +P P+P G+ L P AT SAP+ A VP S A + +P+P Sbjct: 113 AAAQPAPVPVAAGEAP-SPLAPETPAPATESAPAVAPAGVPAAEPVSEALSAPLPEPVPE 171 Query: 489 P*QAFPYRPELAAAEA 442 P P +A EA Sbjct: 172 PVPEPPAPEVVAVVEA 187
>HIC1_HUMAN (Q14526) Hypermethylated in cancer 1 protein (Hic-1) (Zinc finger| and BTB domain-containing protein 29) Length = 733 Score = 30.4 bits (67), Expect = 5.1 Identities = 29/79 (36%), Positives = 35/79 (44%), Gaps = 2/79 (2%) Frame = -1 Query: 616 PHGASSPSRPRCHPLCS*PGGRRRAPGLFNSRRSPSPGSSAVS--MTSLSLPPRARSCRS 443 P A S RC PLC GL S++SP PGS+A + LPPR S Sbjct: 225 PAAALCASERRCSPLC----------GLDLSKKSP-PGSAAPERPLAERELPPRPDS--- 270 Query: 442 WPPCCSAAPSGQRCKPRLL 386 PP SA P+ + P L Sbjct: 271 -PP--SAGPAAYKEPPLAL 286
>ENPP1_HUMAN (P22413) Ectonucleotide pyrophosphatase/phosphodiesterase 1 (E-NPP| 1) (Phosphodiesterase I/nucleotide pyrophosphatase 1) (Plasma-cell membrane glycoprotein PC-1) [Includes: Alkaline phosphodiesterase I (EC 3.1.4.1); Nucleotide pyrophosphatase Length = 925 Score = 30.4 bits (67), Expect = 5.1 Identities = 16/27 (59%), Positives = 18/27 (66%), Gaps = 2/27 (7%) Frame = -2 Query: 393 GCSGDGERGG-GHRHPGD-PAAGGRDR 319 GC+G G RGG G R P + PA GRDR Sbjct: 5 GCAGGGSRGGEGGRAPREGPAGNGRDR 31
>EXO5_BPT5 (P06229) Exodeoxyribonuclease (EC 3.1.11.3) (5'exonuclease)| Length = 290 Score = 30.4 bits (67), Expect = 5.1 Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 2/54 (3%) Frame = +1 Query: 73 ESICGYLSLN-RGVPSFGLDQGYFMVLSLGNFLKLTNGAQSIKPGKKRYV-NMN 228 ++I G L N RGV G +GY ++ GN L + + Q PGK++Y+ N+N Sbjct: 195 KAIMGDLGDNIRGVEGIGAKRGYNIIREFGNVLDIID--QLPLPGKQKYIQNLN 246
>PO4F2_HUMAN (Q12837) POU domain, class 4, transcription factor 2| (Brain-specific homeobox/POU domain protein 3B) (Brn-3B) Length = 410 Score = 26.9 bits (58), Expect(2) = 5.2 Identities = 25/94 (26%), Positives = 33/94 (35%), Gaps = 9/94 (9%) Frame = -2 Query: 411 GSGASPGCSGDGERGGGHRHPGDPAAGGRD---RLLLPLRCSPDYHELDEAEVVQAQVHR 241 G G G G G R G GG + R LP S + LDE+ + +A+ Sbjct: 57 GGGGGGGGGGGGGRSSSSSSSGSSGGGGSEAMRRACLPTPPSNIFGGLDESLLARAEALA 116 Query: 240 DVSAV------HVHVPLLPRFDALGTVCQLQKVP 157 V V H H P F T + +P Sbjct: 117 AVDIVSQSKSHHHHPPHHSPFKPDATYHTMNTIP 150 Score = 21.9 bits (45), Expect(2) = 5.2 Identities = 12/31 (38%), Positives = 15/31 (48%) Frame = -1 Query: 559 GGRRRAPGLFNSRRSPSPGSSAVSMTSLSLP 467 GG +++ S SPGSSA S S P Sbjct: 17 GGSLHVEPKYSALHSTSPGSSAPIAPSASSP 47
>CN115_HUMAN (Q9H8Y1) Protein C14orf115| Length = 702 Score = 30.0 bits (66), Expect = 6.6 Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 4/75 (5%) Frame = -2 Query: 600 PRRVLAATRSAPSQAAG-VVPLVSST---AGDLQVQDPLPSP*QAFPYRPELAAAEAGLR 433 P A T S G V+P S AG+ +DP P+P + P R L+ + LR Sbjct: 454 PALSAAGTPQLASVGEGAVIPWKSEAEEGAGNATGEDP-PAPGELLPLRMPLSRWQRRLR 512 Query: 432 VAVRRHLGSGASPGC 388 A RR + SG P C Sbjct: 513 RAARRQVLSGHLPFC 527
>CIA1_SCHPO (O74515) Histone chaperone cia1| Length = 262 Score = 30.0 bits (66), Expect = 6.6 Identities = 23/102 (22%), Positives = 40/102 (39%), Gaps = 8/102 (7%) Frame = +3 Query: 81 LWVSVLEQRGAFLRFGPRVLHGFIPWELSEVDKRCPEHQTGEEEVREH---ELQIRLDEL 251 +W S+L ++ PRV I W+ + D P +EE E E++ DE Sbjct: 141 VWRSILAEK-------PRVTRFNIQWDNPDFDDAPPVQPDADEEEEEEEADEMEEEFDEE 193 Query: 252 ALEPPQPHPVHDNRGSNE-----EVEEGDRGHRRQDPQDVDV 362 + D G E E E +G ++ +++D+ Sbjct: 194 GEGDEEEEEEDDGDGDGEGDGDGEGENDGKGSEEEEEEEIDI 235
>GAG_BIV27 (P19559) Gag polyprotein (p53) [Contains: Matrix protein p17;| Capsid protein p26; Nucleocapsid protein p14] Length = 476 Score = 30.0 bits (66), Expect = 6.6 Identities = 13/24 (54%), Positives = 18/24 (75%) Frame = -1 Query: 463 RARSCRSWPPCCSAAPSGQRCKPR 392 +AR+CRS CS+AP GQR +P+ Sbjct: 432 QARNCRSKNGKCSSAPYGQRSQPQ 455
>GAG_BIV06 (P19558) Gag polyprotein (p53) [Contains: Matrix protein p17;| Capsid protein p26; Nucleocapsid protein p14] Length = 476 Score = 30.0 bits (66), Expect = 6.6 Identities = 13/24 (54%), Positives = 18/24 (75%) Frame = -1 Query: 463 RARSCRSWPPCCSAAPSGQRCKPR 392 +AR+CRS CS+AP GQR +P+ Sbjct: 432 QARNCRSKNGKCSSAPYGQRSQPQ 455
>RL3_LISMO (Q8Y440) 50S ribosomal protein L3| Length = 209 Score = 30.0 bits (66), Expect = 6.6 Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 4/81 (4%) Frame = -2 Query: 441 GLRVAVRRHLGSGASPGCSGDGERGGGHRHPGD--PAAGGR--DRLLLPLRCSPDYHELD 274 G + ++RH G S G G R HR PG P A R LLP R + + Sbjct: 118 GFQGVIKRH---GQSRGPMAHGSRY--HRRPGSMGPVAPNRVFKNKLLPGRMGGEQITIQ 172 Query: 273 EAEVVQAQVHRDVSAVHVHVP 211 E+V+ V ++V V +VP Sbjct: 173 NLEIVKVDVEKNVLLVKGNVP 193
>RL3_LISMF (Q71WE6) 50S ribosomal protein L3| Length = 209 Score = 30.0 bits (66), Expect = 6.6 Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 4/81 (4%) Frame = -2 Query: 441 GLRVAVRRHLGSGASPGCSGDGERGGGHRHPGD--PAAGGR--DRLLLPLRCSPDYHELD 274 G + ++RH G S G G R HR PG P A R LLP R + + Sbjct: 118 GFQGVIKRH---GQSRGPMAHGSRY--HRRPGSMGPVAPNRVFKNKLLPGRMGGEQITIQ 172 Query: 273 EAEVVQAQVHRDVSAVHVHVP 211 E+V+ V ++V V +VP Sbjct: 173 NLEIVKVDVEKNVLLVKGNVP 193
>RL3_LISIN (Q927K7) 50S ribosomal protein L3| Length = 209 Score = 30.0 bits (66), Expect = 6.6 Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 4/81 (4%) Frame = -2 Query: 441 GLRVAVRRHLGSGASPGCSGDGERGGGHRHPGD--PAAGGR--DRLLLPLRCSPDYHELD 274 G + ++RH G S G G R HR PG P A R LLP R + + Sbjct: 118 GFQGVIKRH---GQSRGPMAHGSRY--HRRPGSMGPVAPNRVFKNKLLPGRMGGEQITIQ 172 Query: 273 EAEVVQAQVHRDVSAVHVHVP 211 E+V+ V ++V V +VP Sbjct: 173 NLEIVKVDVEKNVLLVKGNVP 193
>HNRLL_HUMAN (Q8WVV9) Heterogeneous nuclear ribonucleoprotein L-like (Stromal| RNA-regulating factor) (BLOCK24 protein) Length = 542 Score = 30.0 bits (66), Expect = 6.6 Identities = 23/82 (28%), Positives = 34/82 (41%) Frame = -2 Query: 402 ASPGCSGDGERGGGHRHPGDPAAGGRDRLLLPLRCSPDYHELDEAEVVQAQVHRDVSAVH 223 A+P GDG GGG R P AGG +H++ + VV R + Sbjct: 45 ATPRGGGDG--GGGGRSFSQPEAGG------------SHHKVSVSPVVHV---RGLCESV 87 Query: 222 VHVPLLPRFDALGTVCQLQKVP 157 V L+ + GT+C + +P Sbjct: 88 VEADLVEALEKFGTICYVMMMP 109
>STRN4_HUMAN (Q9NRL3) Striatin-4 (Zinedin)| Length = 753 Score = 29.6 bits (65), Expect = 8.7 Identities = 30/99 (30%), Positives = 39/99 (39%), Gaps = 13/99 (13%) Frame = -2 Query: 462 ELAAAEAGLRVAVRRHLGSGASPGCSG-------------DGERGGGHRHPGDPAAGGRD 322 E AAA + R LGSGA PG +G G+ GGG PG A G + Sbjct: 4 ERAAAAVAAAASSCRPLGSGAGPGPTGAAPVSAPAPGPGPAGKGGGGGGSPGPTA--GPE 61 Query: 321 RLLLPLRCSPDYHELDEAEVVQAQVHRDVSAVHVHVPLL 205 L LP HE E +A+ + + + V L Sbjct: 62 PLSLPGILHFIQHEWARFEAEKARWEAERAELQAQVAFL 100
>INO80_NEUCR (Q872I5) Putative DNA helicase ino-80 (EC 3.6.1.-)| Length = 2001 Score = 29.6 bits (65), Expect = 8.7 Identities = 22/71 (30%), Positives = 34/71 (47%) Frame = -2 Query: 672 GATATCRPKPLPAINGDHRLMALPPRRVLAATRSAPSQAAGVVPLVSSTAGDLQVQDPLP 493 G T+T LPA+ + PP ++ T + PS+AAGV+ S + L +P+P Sbjct: 437 GTTSTA----LPALGRNDS----PPSKMSPGTSTNPSRAAGVM----SFSNILSSSEPVP 484 Query: 492 SP*QAFPYRPE 460 P P P+ Sbjct: 485 RPRATSPNNPD 495
>GCNL2_HUMAN (Q92830) General control of amino acid synthesis protein 5-like 2| (EC 2.3.1.48) (Histone acetyltransferase GCN5) (hsGCN5) (STAF97) Length = 837 Score = 29.6 bits (65), Expect = 8.7 Identities = 28/95 (29%), Positives = 33/95 (34%) Frame = -2 Query: 612 MALPPRRVLAATRSAPSQAAGVVPLVSSTAGDLQVQDPLPSP*QAFPYRPELAAAEAGLR 433 MA P + A + P P + T P+P+P A P AAA AG Sbjct: 1 MAEPSQAPTPAPAAQPRPLQSPAPAPTPTPAPSPASAPIPTPTPA--PAPAPAAAPAG-- 56 Query: 432 VAVRRHLGSGASPGCSGDGERGGGHRHPGDPAAGG 328 S G G G GG GDPA G Sbjct: 57 -----------STGTGGPGVGSGGAGSGGDPARPG 80
>TAF4_HUMAN (O00268) Transcription initiation factor TFIID subunit 4| (Transcription initiation factor TFIID 135 kDa subunit) (TAF(II)135) (TAFII-135) (TAFII135) (TAFII-130) (TAFII130) Length = 1085 Score = 29.6 bits (65), Expect = 8.7 Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 2/82 (2%) Frame = -1 Query: 658 LPPKASACHQWRSPPHGASSPSRPRCHPLCS*PGGRRRAPGLFNSRRSPSPGSSAVSMTS 479 +PP A+A +G S+ + P P P G PG + +P+PG A S Sbjct: 297 VPPPAAA-------QNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKR 349 Query: 478 L--SLPPRARSCRSWPPCCSAA 419 + + PP A++ + P +AA Sbjct: 350 VVQAAPPAAQTLAASGPASTAA 371
>IE18_PRVIF (P11675) Immediate-early protein IE180| Length = 1461 Score = 29.6 bits (65), Expect = 8.7 Identities = 22/65 (33%), Positives = 28/65 (43%) Frame = -1 Query: 607 ASSPSRPRCHPLCS*PGGRRRAPGLFNSRRSPSPGSSAVSMTSLSLPPRARSCRSWPPCC 428 A SPS PR P + RR A +S S S SS+ + P A R+ PP Sbjct: 369 ARSPSAPRA-PAAAAAAARRSASSSSSSSSSSSSSSSSEGEEDEGVRPGAPLARAGPPPS 427 Query: 427 SAAPS 413 AP+ Sbjct: 428 PPAPA 432
>ICP4_HHV11 (P08392) Trans-acting transcriptional protein ICP4 (Transcriptional| activator IE175) (Alpha-4 protein) Length = 1298 Score = 29.6 bits (65), Expect = 8.7 Identities = 27/71 (38%), Positives = 29/71 (40%), Gaps = 1/71 (1%) Frame = -2 Query: 501 PLPSP*QAFPYRPELAAAEAGLR-VAVRRHLGSGASPGCSGDGERGGGHRHPGDPAAGGR 325 P P P A P P AAA+A R VAV R G P G + G H PAA Sbjct: 774 PGPEPAPAQPAAPRAAAAQARPRPVAVSRRPAEGPDP-LGGWRRQPPGPSHTAAPAAAA- 831 Query: 324 DRLLLPLRCSP 292 L CSP Sbjct: 832 ----LEAYCSP 838
>BSN_MOUSE (O88737) Bassoon protein| Length = 3941 Score = 29.6 bits (65), Expect = 8.7 Identities = 21/66 (31%), Positives = 26/66 (39%) Frame = -1 Query: 601 SPSRPRCHPLCS*PGGRRRAPGLFNSRRSPSPGSSAVSMTSLSLPPRARSCRSWPPCCSA 422 +PS+ R P S P R AP P PG + + PPRA S P + Sbjct: 3807 APSQARLQPQ-SQPTTRGTAPAASQPAGKPQPGPTTAPGPQPAGPPRAEQASSSKPPAAK 3865 Query: 421 APSGQR 404 AP R Sbjct: 3866 APQQGR 3871
>ICP0_BHV1K (P29836) Trans-acting transcriptional protein ICP0 (P135 protein)| (IER 2.9/ER2.6) Length = 676 Score = 29.6 bits (65), Expect = 8.7 Identities = 21/72 (29%), Positives = 27/72 (37%), Gaps = 6/72 (8%) Frame = -2 Query: 588 LAATRSAPSQAAGVVP------LVSSTAGDLQVQDPLPSP*QAFPYRPELAAAEAGLRVA 427 + A +APS A G P + TA + + P PSP P A L A Sbjct: 527 VTAAAAAPSVARGSAPSPAVTAAATGTAAAISTRAPTPSPAGRAPAADPRRAGAPALAGA 586 Query: 426 VRRHLGSGASPG 391 R G +PG Sbjct: 587 ARAEAGRNGNPG 598
>SCMH1_MOUSE (Q8K214) Polycomb protein SCMH1 (Sex comb on midleg homolog 1)| Length = 706 Score = 29.6 bits (65), Expect = 8.7 Identities = 21/74 (28%), Positives = 27/74 (36%) Frame = -1 Query: 616 PHGASSPSRPRCHPLCS*PGGRRRAPGLFNSRRSPSPGSSAVSMTSLSLPPRARSCRSWP 437 PH S+PS+ P F +R P PGS T LS PP + + + Sbjct: 289 PHPTSTPSKSA-------------EPLKFPKKRGPKPGSKRKPRTLLSPPPTSPTTSTPE 335 Query: 436 PCCSAAPSGQRCKP 395 P S P P Sbjct: 336 PDTSTVPQDAATVP 349
>FBRL_DROME (Q9W1V3) Fibrillarin| Length = 344 Score = 29.6 bits (65), Expect = 8.7 Identities = 15/29 (51%), Positives = 15/29 (51%) Frame = -2 Query: 411 GSGASPGCSGDGERGGGHRHPGDPAAGGR 325 G GA G G G RGGG R G GGR Sbjct: 70 GRGAFGGRGGGGGRGGGGRGGGGRGGGGR 98
>IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2| Length = 1033 Score = 29.6 bits (65), Expect = 8.7 Identities = 35/114 (30%), Positives = 42/114 (36%), Gaps = 2/114 (1%) Frame = -2 Query: 663 ATCRPK-PLPAINGDHRLMALPPRRVLAATRSA-PSQAAGVVPLVSSTAGDLQVQDPLPS 490 A RP P PA G + R A SA P A P S Q P P+ Sbjct: 69 AAPRPSAPSPAQAGPSQAAPAAGDRAAAPRPSAAPKAPAAQQPAAPSAPAPAPSQGPRPT 128 Query: 489 P*QAFPYRPELAAAEAGLRVAVRRHLGSGASPGCSGDGERGGGHRHPGDPAAGG 328 P RP AA E A + ++P + G + GG R PG P GG Sbjct: 129 PGPKPAPRPAPAAPEFTAPPAAP---AAPSTPAPAPSGPKPGGAR-PGAPKPGG 178
>AFSR_STRCO (P25941) Regulatory protein afsR| Length = 993 Score = 29.6 bits (65), Expect = 8.7 Identities = 16/37 (43%), Positives = 20/37 (54%) Frame = +1 Query: 541 GHDACRLARSRAGGSEDATGRKRHEAVISIDGRQRLW 651 GH A +A +RAG E+A G + D RQRLW Sbjct: 865 GHFALGVALTRAGRHEEALGEFAEALDLFGDHRQRLW 901 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 99,916,915 Number of Sequences: 219361 Number of extensions: 2384276 Number of successful extensions: 11016 Number of sequences better than 10.0: 78 Number of HSP's better than 10.0 without gapping: 8915 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 10832 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6541540170 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
