>WSC4_YEAST (P38739) Cell wall integrity and stress response component 4|
           precursor
          Length = 605

 Score = 36.2 bits (82), Expect = 0.060
 Identities = 24/100 (24%), Positives = 36/100 (36%)
 Frame = -3

Query: 521 TTTAPSLCSSCPCTISCSFCILNPTSSAAVPAPGMSSYKSTTTALWXXXXXXXXXXXXXX 342
           TTT+  L +S P + + S      TSS+      ++S  STTT+                
Sbjct: 181 TTTSTKLSTSIPTSTTSSTSTTTSTSSSTSTTVSVTSSTSTTTSTTSSTLISTSTSSSSS 240

Query: 341 XXXXXXXXXXXXXXXXXXVSTTFSSTVPLSTCAVPRSLST 222
                              ST+ S+T P S+ A   S +T
Sbjct: 241 STPTTTSSAPISTSTTSSTSTSTSTTSPTSSSAPTSSSNT 280



 Score = 30.8 bits (68), Expect = 2.5
 Identities = 24/112 (21%), Positives = 40/112 (35%)
 Frame = -3

Query: 524 STTTAPSLCSSCPCTISCSFCILNPTSSAAVPAPGMSSYKSTTTALWXXXXXXXXXXXXX 345
           STT +  + S+ P T S       PTS+ +  +   S+  ST+T +              
Sbjct: 168 STTPSTDITSALPTTTSTKLSTSIPTSTTSSTSTTTSTSSSTSTTV-------------S 214

Query: 344 XXXXXXXXXXXXXXXXXXXVSTTFSSTVPLSTCAVPRSLSTAAILIYPASVT 189
                               +++ SS+ P +T + P S ST +      S T
Sbjct: 215 VTSSTSTTTSTTSSTLISTSTSSSSSSTPTTTSSAPISTSTTSSTSTSTSTT 266

>VGLX_EHV1B (P28968) Glycoprotein X precursor|
          Length = 797

 Score = 32.3 bits (72), Expect = 0.87
 Identities = 25/116 (21%), Positives = 40/116 (34%)
 Frame = -3

Query: 536 SIXCSTTTAPSLCSSCPCTISCSFCILNPTSSAAVPAPGMSSYKSTTTALWXXXXXXXXX 357
           S   STT+ P+  S+   T + +     PT++ A P    ++  + TTA           
Sbjct: 92  STASSTTSIPTSTSTETTTTTPTASTTTPTTTTAAPTTAATT-TAVTTAASTSAETTTAT 150

Query: 356 XXXXXXXXXXXXXXXXXXXXXXXVSTTFSSTVPLSTCAVPRSLSTAAILIYPASVT 189
                                  V TT S+T   +T A   + +T A     A+ T
Sbjct: 151 ATATSTPTTTTPTSTTTTTATTTVPTTASTTTDTTTAATTTAATTTAATTTAATTT 206



 Score = 30.0 bits (66), Expect = 4.3
 Identities = 23/112 (20%), Positives = 37/112 (33%), Gaps = 5/112 (4%)
 Frame = -3

Query: 536 SIXCSTTTAPSLCS---SCPCTISCSFCILNPTSSAAVP--APGMSSYKSTTTALWXXXX 372
           S   ++++APS  S   S P + S       PT+S   P       +  +TTTA+     
Sbjct: 82  STAATSSSAPSTASSTTSIPTSTSTETTTTTPTASTTTPTTTTAAPTTAATTTAVTTAAS 141

Query: 371 XXXXXXXXXXXXXXXXXXXXXXXXXXXXVSTTFSSTVPLSTCAVPRSLSTAA 216
                                        +TT  +T   +T     + +TAA
Sbjct: 142 TSAETTTATATATSTPTTTTPTSTTTTTATTTVPTTASTTTDTTTAATTTAA 193

>VGLX_EHV1V (Q6S6W0) Glycoprotein X precursor|
          Length = 866

 Score = 32.3 bits (72), Expect = 0.87
 Identities = 25/116 (21%), Positives = 40/116 (34%)
 Frame = -3

Query: 536 SIXCSTTTAPSLCSSCPCTISCSFCILNPTSSAAVPAPGMSSYKSTTTALWXXXXXXXXX 357
           S   STT+ P+  S+   T + +     PT++ A P    ++  + TTA           
Sbjct: 92  STASSTTSIPTSTSTETTTTTPTASTTTPTTTTAAPTTAATT-TAVTTAASTSAETTTAT 150

Query: 356 XXXXXXXXXXXXXXXXXXXXXXXVSTTFSSTVPLSTCAVPRSLSTAAILIYPASVT 189
                                  V TT S+T   +T A   + +T A     A+ T
Sbjct: 151 ATATSTPTTTTPTSTTTTTATTTVPTTASTTTDTTTAATTTAATTTAATTTAATTT 206



 Score = 30.0 bits (66), Expect = 4.3
 Identities = 23/112 (20%), Positives = 37/112 (33%), Gaps = 5/112 (4%)
 Frame = -3

Query: 536 SIXCSTTTAPSLCS---SCPCTISCSFCILNPTSSAAVP--APGMSSYKSTTTALWXXXX 372
           S   ++++APS  S   S P + S       PT+S   P       +  +TTTA+     
Sbjct: 82  STAATSSSAPSTASSTTSIPTSTSTETTTTTPTASTTTPTTTTAAPTTAATTTAVTTAAS 141

Query: 371 XXXXXXXXXXXXXXXXXXXXXXXXXXXXVSTTFSSTVPLSTCAVPRSLSTAA 216
                                        +TT  +T   +T     + +TAA
Sbjct: 142 TSAETTTATATATSTPTTTTPTSTTTTTATTTVPTTASTTTDTTTAATTTAA 193

>SPEN_DROME (Q8SX83) Protein split ends|
          Length = 5560

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 20/86 (23%), Positives = 32/86 (37%)
 Frame = -2

Query: 525  QHHHRTKXXXXXXXXXXXXXXXXXXXXLSSRTRTRHVLLQVNHHSLMDNRTRRSSCTGNR 346
            +HHHR                      +   ++T+H L   +   L  ++ +R      R
Sbjct: 2237 KHHHRRDKHHQKGSASSIETNSSIEVVVDPISQTKHNL-NTSEEELQSHQPKREK---ER 2292

Query: 345  THRSSHMGSSRTRHSHMGSRIHHLQQ 268
             H SSH  SS +RH       HH ++
Sbjct: 2293 EHFSSHANSSSSRHKSKRDHHHHREK 2318

>CAHC_HORVU (P40880) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1)|
           (Carbonate dehydratase)
          Length = 324

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 19/48 (39%), Positives = 25/48 (52%)
 Frame = -3

Query: 527 CSTTTAPSLCSSCPCTISCSFCILNPTSSAAVPAPGMSSYKSTTTALW 384
           CST    + CS+C   I+ S C L     AA+P P  +S+ ST  A W
Sbjct: 29  CSTIDNAN-CSTCSMKIN-STCTLTALPIAALPGPRTTSHYSTAAANW 74

>SP96_DICDI (P14328) Spore coat protein SP96|
          Length = 600

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 23/116 (19%), Positives = 42/116 (36%)
 Frame = -3

Query: 536 SIXCSTTTAPSLCSSCPCTISCSFCILNPTSSAAVPAPGMSSYKSTTTALWXXXXXXXXX 357
           S   S++ + S  SS P + + S    +P+SSAA  +P  S+  S++ +           
Sbjct: 453 SSAASSSPSSSAASSSPSSSAASS---SPSSSAASSSPSSSASSSSSPSSSASSSSAPSS 509

Query: 356 XXXXXXXXXXXXXXXXXXXXXXXVSTTFSSTVPLSTCAVPRSLSTAAILIYPASVT 189
                                   + T ++T   +T A   + +TA      A+ T
Sbjct: 510 SASSSSAPSSSASSSSASSSSASSAATTAATTIATTAATTTATTTATTATTTATTT 565

>MUC1_XENLA (Q05049) Integumentary mucin C.1 (FIM-C.1) (Fragment)|
          Length = 662

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 20/111 (18%), Positives = 36/111 (32%)
 Frame = -3

Query: 521 TTTAPSLCSSCPCTISCSFCILNPTSSAAVPAPGMSSYKSTTTALWXXXXXXXXXXXXXX 342
           TTT P+  ++   T +       PT++   P    ++  +TTT                 
Sbjct: 403 TTTTPTTTTTPTTTTTTKATTTTPTTTTTTP----TTTTTTTTTTKATTTTPTTTTPTTT 458

Query: 341 XXXXXXXXXXXXXXXXXXVSTTFSSTVPLSTCAVPRSLSTAAILIYPASVT 189
                              +T  ++T P +T   P + +T A    P + T
Sbjct: 459 TTKATTTTPTTTTTTPTTTTTKATTTTPTTTTTTPTTTTTKATTTTPTTTT 509

>WSC2_YEAST (P53832) Cell wall integrity and stress response component 2|
           precursor
          Length = 503

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 28/120 (23%), Positives = 39/120 (32%), Gaps = 1/120 (0%)
 Frame = -3

Query: 536 SIXCSTTTAPSLCSSCPCTISCSFCILNPTSSAAVPAPGMSSYKSTTTALWXXXXXXXXX 357
           S   ST+T  S  +S     S        TSS+A  +   SS  STTT+           
Sbjct: 128 STATSTSTTSSSSTSVSSKTSTKLDTKTSTSSSATHSSSSSSTTSTTTSSSETTTSSSSS 187

Query: 356 XXXXXXXXXXXXXXXXXXXXXXXV-STTFSSTVPLSTCAVPRSLSTAAILIYPASVTDVA 180
                                    STT SST   S+     + +T++     +S T  A
Sbjct: 188 SSSSSTSTTSTTSTTSSTTSTSSSPSTTSSSTSASSSSETSSTQATSSSTTSTSSSTSTA 247

>YL61_SCHPO (Q8TFG9) Hypothetical serine/threonine-rich protein PB15E9.01c|
           precursor
          Length = 943

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 28/117 (23%), Positives = 39/117 (33%), Gaps = 10/117 (8%)
 Frame = -3

Query: 536 SIXCSTTTAPSLCSSCP----------CTISCSFCILNPTSSAAVPAPGMSSYKSTTTAL 387
           S+  S+TT+ SL SS               S S      ++SA   +   SS  STT+A 
Sbjct: 148 SLASSSTTSSSLASSSTNSTTSATPTSSATSSSLSSTAASNSATSSSLASSSLNSTTSAT 207

Query: 386 WXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSTTFSSTVPLSTCAVPRSLSTAA 216
                                             S++ SSTV  ST     + +TAA
Sbjct: 208 ATSSSLSSTAASNSATSSSLASSSLNSTTSATATSSSISSTVSSSTPLTSSNSTTAA 264

>HUNB_MUSDO (Q01778) Protein hunchback|
          Length = 817

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = -2

Query: 399 HHSLMDNRTRRSSCTGNRTHRSSHMGSSRTRHSHMGSRIHHLQ 271
           H S+M ++ + S  T    H ++H+ +   +H+H G   HHLQ
Sbjct: 64  HSSMMASQPQHSPLT----HSANHLENYLKQHAHNGGGAHHLQ 102

>AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor|
          Length = 725

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 28/111 (25%), Positives = 39/111 (35%)
 Frame = -3

Query: 527 CSTTTAPSLCSSCPCTISCSFCILNPTSSAAVPAPGMSSYKSTTTALWXXXXXXXXXXXX 348
           C TT   SL      T+  S  I    SSA++ +P  S+  STT++              
Sbjct: 136 CHTTAISSLSEVGTTTVVSSSAI--EPSSASIISPVTSTLSSTTSSNPTTTSLSSTSTSP 193

Query: 347 XXXXXXXXXXXXXXXXXXXXVSTTFSSTVPLSTCAVPRSLSTAAILIYPAS 195
                                S+T  ST   ST   P S ST++ L   +S
Sbjct: 194 SSTSTSPSSTSTSSSSTSTSSSST--STSSSSTSTSPSSTSTSSSLTSTSS 242

>IF38_ARATH (O49160) Eukaryotic translation initiation factor 3 subunit 8 (eIF3|
           p110) (eIF3c) (p105)
          Length = 900

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = -2

Query: 435 RTRTRHVLLQVNHHSLMDN 379
           RT+ R +L  +NHH+LMDN
Sbjct: 494 RTKARAMLCDINHHALMDN 512

>HSP1_ALLMI (Q7LZB6) Sperm protamine P1-type (Protamine II)|
          Length = 56

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 19/51 (37%), Positives = 22/51 (43%)
 Frame = -2

Query: 438 SRTRTRHVLLQVNHHSLMDNRTRRSSCTGNRTHRSSHMGSSRTRHSHMGSR 286
           SR+R+RH   +  H      R RR    G   HR  H G SR R     SR
Sbjct: 8   SRSRSRHRRRRRGHRG---GRYRRRRRRGRYGHRRHHRGHSRRRRKRRRSR 55

>TRUB_XANCP (Q8P7U9) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA|
           pseudouridine 55 synthase) (Psi55 synthase)
           (tRNA-uridine isomerase) (tRNA pseudouridylate synthase)
          Length = 308

 Score = 29.3 bits (64), Expect = 7.4
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = +1

Query: 94  CLSYLTDLQ*AWCDPFETTQRPELIIIYAATSVTEAG 204
           C +++  L+  W +PF T   PE+I + A T++ E+G
Sbjct: 193 CGAHIAALRRVWVEPFRT---PEMITLEALTALVESG 226

>TRUB_XANC8 (Q4UWA0) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA|
           pseudouridine 55 synthase) (Psi55 synthase)
           (tRNA-uridine isomerase) (tRNA pseudouridylate synthase)
          Length = 308

 Score = 29.3 bits (64), Expect = 7.4
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = +1

Query: 94  CLSYLTDLQ*AWCDPFETTQRPELIIIYAATSVTEAG 204
           C +++  L+  W +PF T   PE+I + A T++ E+G
Sbjct: 193 CGAHIAALRRVWVEPFRT---PEMITLEALTALVESG 226

>SP63_STRPU (Q07929) 63 kDa sperm flagellar membrane protein precursor|
          Length = 470

 Score = 29.3 bits (64), Expect = 7.4
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = -3

Query: 533 IXCSTTTAPSLCSSCPCTISCSFCILNPTSSAAVPAPG 420
           I  +T   P  C+S PCTI+ + C+    S      PG
Sbjct: 34  ITATTADPPDPCASNPCTIASTHCVAAGESHTCECRPG 71

>DLX2_MOUSE (P40764) Homeobox protein DLX-2 (Homeobox protein TES-1)|
          Length = 332

 Score = 29.3 bits (64), Expect = 7.4
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = -2

Query: 366 SSCTGNRTHRSSHMGSSRTRHSHMGSRIHHLQQHSPLIHLRRTPELIHRGH 214
           SS +   +  S+ +G+    H   GS   HLQ  +PL+H  +TP+  H  H
Sbjct: 266 SSGSSPSSAASAFLGNYPWYHQASGSA-SHLQATAPLLHPSQTPQAHHHHH 315

>BSC1_YEAST (Q12140) Bypass of stop codon protein 1|
          Length = 328

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 21/113 (18%), Positives = 39/113 (34%)
 Frame = -3

Query: 521 TTTAPSLCSSCPCTISCSFCILNPTSSAAVPAPGMSSYKSTTTALWXXXXXXXXXXXXXX 342
           T T  S  S    +I+ S    + T++++      ++  STT++                
Sbjct: 156 TCTKASSSSITTSSITTSSTTTSSTTTSSTTTSSSTTSSSTTSSSTTSSSTTSSSTTSSS 215

Query: 341 XXXXXXXXXXXXXXXXXXVSTTFSSTVPLSTCAVPRSLSTAAILIYPASVTDV 183
                              STT SST   ST    ++ +T +  +  +S T +
Sbjct: 216 TTSSSTTSSSTTSSSTTSSSTTSSSTTSSST----KTSTTTSSTVKSSSTTSI 264


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,062,448
Number of Sequences: 219361
Number of extensions: 877430
Number of successful extensions: 3096
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3064
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4258037034
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)