>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 351     tgcccgtacagctgctgcggcg 372
               ||||||||||||||||||||||
Sbjct: 1185824 tgcccgtacagctgctgcggcg 1185803

>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 301     gctgtggcgggtacggctgctg 322
               ||||||||||||||||||||||
Sbjct: 5241716 gctgtggcgggtacggctgctg 5241695

>emb|AL732443.6| Mouse DNA sequence from clone RP23-90H6 on chromosome X, complete
             sequence
          Length = 219342

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 453   gttgagtatgcagaaggagcaggatatggt 482
             ||||||| ||||| ||||||||||||||||
Sbjct: 97879 gttgagtttgcaggaggagcaggatatggt 97850

>gb|AC150414.2| Branchiostoma floridae clone CH302-62C22, complete sequence
          Length = 210179

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 244    gcgcaggtggataaggggactgtgc 268
              ||||| |||||||||||||||||||
Sbjct: 123969 gcgcaagtggataaggggactgtgc 123945

>ref|XM_413899.1| PREDICTED: Gallus gallus similar to RAS-like, family 12 protein;
           Ras family member Ris (LOC415530), mRNA
          Length = 1956

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 263 ctgtgctgctgaaggtggtggatac 287
           ||||||||||||||||| |||||||
Sbjct: 602 ctgtgctgctgaaggtgatggatac 626

>gb|AY340382.1| Arenicola marina 28S ribosomal RNA gene, partial sequence
          Length = 331

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 292 gcccatatggctgtggcgggt 312
           |||||||||||||||||||||
Sbjct: 188 gcccatatggctgtggcgggt 208

>gb|AY612629.1| Arenicola marina 28S ribosomal RNA gene, partial sequence
          Length = 821

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 292 gcccatatggctgtggcgggt 312
           |||||||||||||||||||||
Sbjct: 207 gcccatatggctgtggcgggt 227

>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome
          Length = 2364842

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 458     gtatgcagaaggagcaggat 477
               ||||||||||||||||||||
Sbjct: 2154500 gtatgcagaaggagcaggat 2154481

>gb|BC103771.1| Mus musculus RIKEN cDNA 7420416P09 gene, mRNA (cDNA clone MGC:117755
            IMAGE:30935479), complete cds
          Length = 3054

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 435  ggctgctgaggaggtggggt 454
            ||||||||||||||||||||
Sbjct: 1205 ggctgctgaggaggtggggt 1224

>ref|NM_001033776.1| Mus musculus RIKEN cDNA 7420416P09 gene (7420416P09Rik), mRNA
          Length = 3054

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 435  ggctgctgaggaggtggggt 454
            ||||||||||||||||||||
Sbjct: 1205 ggctgctgaggaggtggggt 1224

>gb|AC159641.2| Mus musculus BAC clone RP23-465F1 from chromosome 12, complete sequence
          Length = 176949

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 435   ggctgctgaggaggtggggt 454
             ||||||||||||||||||||
Sbjct: 97048 ggctgctgaggaggtggggt 97029

>ref|XM_754375.1| Ustilago maydis 521 hypothetical protein (UM03321.1) partial mRNA
          Length = 564

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 506 ttggtgcggtggtggtgctg 525
           ||||||||||||||||||||
Sbjct: 131 ttggtgcggtggtggtgctg 112

>gb|AC122230.4| Mus musculus BAC clone RP23-133F23 from 9, complete sequence
          Length = 183554

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 496    ctgcataagcttggtgcggtggtg 519
              |||||||||||||||| |||||||
Sbjct: 178021 ctgcataagcttggtgtggtggtg 177998

>emb|CR394546.9| Zebrafish DNA sequence from clone CH211-212I14 in linkage group 16,
             complete sequence
          Length = 174132

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 130   tgtgatccatttgaaacaac 149
             ||||||||||||||||||||
Sbjct: 18809 tgtgatccatttgaaacaac 18828

>emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete genome; segment 14/29
          Length = 309050

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 426    tgcgggtacggctgctgagg 445
              ||||||||||||||||||||
Sbjct: 141682 tgcgggtacggctgctgagg 141663

>emb|CR550302.15| Zebrafish DNA sequence from clone DKEY-145I3 in linkage group 11,
             complete sequence
          Length = 202610

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 130   tgtgatccatttgaaacaac 149
             ||||||||||||||||||||
Sbjct: 31230 tgtgatccatttgaaacaac 31249

>emb|BX957333.8| Zebrafish DNA sequence from clone CH211-10M5 in linkage group 25,
             complete sequence
          Length = 170161

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 130   tgtgatccatttgaaacaac 149
             ||||||||||||||||||||
Sbjct: 61582 tgtgatccatttgaaacaac 61601

>gb|AC055845.15| Homo sapiens chromosome 11, clone RP11-682B13, complete sequence
          Length = 155304

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 200   ctgggtatatcaatatggcc 219
             ||||||||||||||||||||
Sbjct: 54490 ctgggtatatcaatatggcc 54471

>gb|AC069082.9| Homo sapiens chromosome 15, clone RP11-716C8, complete sequence
          Length = 163533

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 487    gggcaggagctgcataagct 506
              ||||||||||||||||||||
Sbjct: 145262 gggcaggagctgcataagct 145281

>gb|AC011797.8| Homo sapiens, clone RP11-17L5, complete sequence
          Length = 158389

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 487   gggcaggagctgcataagct 506
             ||||||||||||||||||||
Sbjct: 45931 gggcaggagctgcataagct 45950

>gb|AC124829.10| Mus musculus chromosome 1, clone RP24-131G15, complete sequence
          Length = 189923

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 124   gcttggtgtgatccatttgaaaca 147
             |||||||||||| |||||||||||
Sbjct: 51816 gcttggtgtgatgcatttgaaaca 51793

>ref|XM_319312.2| Anopheles gambiae str. PEST ENSANGP00000025304 (ENSANGG00000010066),
            mRNA
          Length = 7746

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 263  ctgtgctgctgaaggtggtg 282
            ||||||||||||||||||||
Sbjct: 6194 ctgtgctgctgaaggtggtg 6175

>ref|XM_319314.2| Anopheles gambiae str. PEST ENSANGP00000022367 (ENSANGG00000010066),
            mRNA
          Length = 7746

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 263  ctgtgctgctgaaggtggtg 282
            ||||||||||||||||||||
Sbjct: 6194 ctgtgctgctgaaggtggtg 6175

>ref|XM_319308.2| Anopheles gambiae str. PEST ENSANGP00000012555 (ENSANGG00000010066),
            mRNA
          Length = 8115

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 263  ctgtgctgctgaaggtggtg 282
            ||||||||||||||||||||
Sbjct: 6563 ctgtgctgctgaaggtggtg 6544

>ref|XM_319313.2| Anopheles gambiae str. PEST ENSANGP00000023782 (ENSANGG00000010066),
            mRNA
          Length = 8115

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 263  ctgtgctgctgaaggtggtg 282
            ||||||||||||||||||||
Sbjct: 6563 ctgtgctgctgaaggtggtg 6544

>emb|AL732598.10| Zebrafish DNA sequence from clone CH211-10E8 in linkage group 6,
             complete sequence
          Length = 88982

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 130   tgtgatccatttgaaacaac 149
             ||||||||||||||||||||
Sbjct: 77530 tgtgatccatttgaaacaac 77511

>gb|AC153891.6| Mus musculus 10 BAC RP23-415J15 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 198332

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 435   ggctgctgaggaggtggggt 454
             ||||||||||||||||||||
Sbjct: 22952 ggctgctgaggaggtggggt 22933

>gb|U74621.1|RNU74621 Rattus norvegicus vesicle-associated membrane protein-1b (VAMP-1b)
           mRNA, complete cds
          Length = 1206

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 437 ctgctgaggaggtggggttg 456
           ||||||||||||||||||||
Sbjct: 610 ctgctgaggaggtggggttg 629

>gb|AC139378.4| Mus musculus BAC clone RP23-265F20 from 9, complete sequence
          Length = 256632

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 496    ctgcataagcttggtgcggtggtg 519
              |||||||||||||||| |||||||
Sbjct: 112674 ctgcataagcttggtgtggtggtg 112697

>emb|AL808102.8| Mouse DNA sequence from clone RP23-192O6 on chromosome 2, complete
              sequence
          Length = 178743

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 77     ggagacgatttacatgttgt 96
              ||||||||||||||||||||
Sbjct: 146904 ggagacgatttacatgttgt 146885

>gb|AC168272.8| Mus musculus 10 BAC RP24-261C21 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 189395

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 435    ggctgctgaggaggtggggt 454
              ||||||||||||||||||||
Sbjct: 130398 ggctgctgaggaggtggggt 130417


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,841,041
Number of Sequences: 3902068
Number of extensions: 3841041
Number of successful extensions: 68532
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 68456
Number of HSP's gapped (non-prelim): 76
length of query: 541
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 518
effective length of database: 17,143,297,704
effective search space: 8880228210672
effective search space used: 8880228210672
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)