>PRD_DROME (P06601) Segmentation protein paired|
          Length = 613

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +2

Query: 164 SSTPGPNLPATARGTRRSPQPGAHAHPQYA 253
           +S P P    +  G   +P P AH HPQYA
Sbjct: 538 ASYPAPGHAHSHHGHPHAPHPHAHPHPQYA 567

>PACC_CEPAC (Q96X49) pH-response transcription factor pacC/RIM101|
          Length = 621

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +2

Query: 128 ITFPGSEXIYTSSSTPGPNLPATARGTRRSPQPGAHAHP 244
           +T P S   YTS  +P P+ PA +  +R S   G+  +P
Sbjct: 408 VTPPSSAVSYTSGHSPSPSAPAMSPQSRHSSTSGSVMYP 446

>YER0_YEAST (P40053) Protein YER080W|
          Length = 627

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +1

Query: 19  CLPVSSNGMGEHATLQPFAAPWPRQXPXDTI 111
           CL    + +  H  ++PF  PWP++ P D I
Sbjct: 315 CLWRHKSHLDFHKQMKPFLGPWPKKSPMDII 345

>LOZEN_DROME (Q9W349) Protein lozenge|
          Length = 826

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = +1

Query: 4   HRHATCLPVSSNGMGEHATLQPFAAPWPRQXPXDTIVLLLQDYISRFRVXIHIFLHAGTK 183
           +++ +CL  +  G        P AAP P+  P   +VL  Q Y +  +  IH+ LH+  K
Sbjct: 681 YQYGSCLATAQYG--------PQAAPPPQPPPPPPVVLCPQLYSTVNQNQIHLHLHSSEK 732

>MPIP_DROME (P20483) M-phase inducer phosphatase (EC 3.1.3.48) (Protein string)|
           (Cdc25-like protein)
          Length = 479

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +2

Query: 143 SEXIYTSSSTPGPNLPATARGTRRSPQPGAHAH 241
           +E    S++TP P  P TAR   + P+P A A+
Sbjct: 183 TESNTNSTTTPPPKTPETARDCFKRPEPPASAN 215

>E75BC_DROME (P17671) Ecdysone-induced protein 75B isoforms C/D (E75-A)|
          Length = 1199

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
 Frame = +3

Query: 138 QVPSXYTHLPPRRDQTSPQPQEAHGVRHNQE--RTHILSTHGWWXA 269
           Q+P  +  LP    Q   QPQ+     H Q     H++  HG+  A
Sbjct: 146 QMPQHFESLPHHHPQQEHQPQQQQQQHHLQHHPHPHVMYPHGYQQA 191

>ZN541_HUMAN (Q9H0D2) Zinc finger protein 541|
          Length = 792

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 3/36 (8%)
 Frame = +1

Query: 1   IHRHATCLPVSSN---GMGEHATLQPFAAPWPRQXP 99
           I  HA    VSS      G+ A L+P   PWP+Q P
Sbjct: 13  IFSHAQVAAVSSQLPAPEGKPAALRPLQGPWPQQPP 48

>GRAM3_RAT (Q5FVG8) GRAM domain-containing protein 3|
          Length = 445

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = +3

Query: 135 FQVPSXYTHLPPRRDQTSPQPQEAHGVRHNQERTHILSTHG 257
           F V    T L   + +T P   +AHG R    +  IL  HG
Sbjct: 297 FHVTESQTVLNVTKGETKPPRTDAHGSRAPDGKAKILPAHG 337

>GRAM3_MOUSE (Q6PEM6) GRAM domain-containing protein 3|
          Length = 445

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = +3

Query: 135 FQVPSXYTHLPPRRDQTSPQPQEAHGVRHNQERTHILSTHG 257
           F V    T L   + +T P   +AHG R    +  IL  HG
Sbjct: 297 FHVTESQTVLNVTKGETKPPRTDAHGSRAPDGKAKILPAHG 337

>ERBB2_MOUSE (P70424) Receptor tyrosine-protein kinase erbB-2 precursor (EC|
           2.7.10.1) (p185erbB2) (C-erbB-2) (NEU proto-oncogene)
          Length = 1256

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 19/71 (26%), Positives = 23/71 (32%), Gaps = 3/71 (4%)
 Frame = -1

Query: 241 MCVRSWLWR---TPCASCGCGEVWSRRGGRCVYXLGTWKCNLVVVGLLYHXXSDAAMERQ 71
           +C R   W    T C +C        RG  CV     WK                 + R+
Sbjct: 515 LCARGHCWGPGPTQCVNCS----QFLRGQECVEECRVWK----------------GLPRE 554

Query: 70  MAVGLHALPCH 38
              G H LPCH
Sbjct: 555 YVRGKHCLPCH 565


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,094,303
Number of Sequences: 219361
Number of extensions: 829316
Number of successful extensions: 2942
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2938
length of database: 80,573,946
effective HSP length: 83
effective length of database: 62,366,983
effective search space used: 1496807592
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)