ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbasd27c11 |
|---|---|
| Clone Library Name | barley_pub |
>SRPR_DROME (Q9U5L1) Signal recognition particle receptor alpha subunit homolog| (SR-alpha) (Docking protein alpha) (DP-alpha) (GTP-binding protein) Length = 614 Score = 237 bits (604), Expect = 3e-62 Identities = 121/194 (62%), Positives = 150/194 (77%), Gaps = 13/194 (6%) Frame = -3 Query: 764 QHNLSVMMAACDTFRSGAVEQLRTHARRLQ-------------IPIFEKGYEKDPAVVAK 624 +++ +V++AACDTFR+GAVEQLRTH R L + ++EKGY KD A +A Sbjct: 421 ENDFNVLIAACDTFRAGAVEQLRTHTRHLNALHPAAKHDGRNMVQLYEKGYGKDAAGIAM 480 Query: 623 EAIQEATRNKSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQL 444 EAI+ A + DVVLVDTAGRMQDNEPLMR+LSKLI +N PDLVLFVGEALVGN+AVDQL Sbjct: 481 EAIKFAHDTRVDVVLVDTAGRMQDNEPLMRSLSKLIKVNNPDLVLFVGEALVGNEAVDQL 540 Query: 443 NKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDL 264 KFNQ LAD S+ +IDGI+LTKFDTIDDKVGAA+SM YI+G P++FVG GQ+Y DL Sbjct: 541 VKFNQSLADYSSNENPHIIDGIVLTKFDTIDDKVGAAISMTYITGQPIVFVGTGQTYADL 600 Query: 263 KKLNVKSIVKTLLK 222 K +NV ++V +L+K Sbjct: 601 KAINVNAVVNSLMK 614
>SRPR_HUMAN (P08240) Signal recognition particle receptor alpha subunit| (SR-alpha) (Docking protein alpha) (DP-alpha) Length = 638 Score = 234 bits (596), Expect = 3e-61 Identities = 123/194 (63%), Positives = 145/194 (74%), Gaps = 13/194 (6%) Frame = -3 Query: 764 QHNLSVMMAACDTFRSGAVEQLRTHARRLQ-------------IPIFEKGYEKDPAVVAK 624 ++ SV++AACDTFR+GAVEQLRTH RRL + +FEKGY KD A +A Sbjct: 444 ENGFSVLIAACDTFRAGAVEQLRTHTRRLSALHPPEKHGGRTMVQLFEKGYGKDAAGIAM 503 Query: 623 EAIQEATRNKSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQL 444 EAI A DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL Sbjct: 504 EAIAFARNQGFDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQL 563 Query: 443 NKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDL 264 KFN+ LAD S T RLIDGI+LTKFDTIDDKVGAA+SM YI+ P++FVG GQ+Y DL Sbjct: 564 VKFNRALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDL 623 Query: 263 KKLNVKSIVKTLLK 222 + LN K++V L+K Sbjct: 624 RSLNAKAVVAALMK 637
>SRPR_MOUSE (Q9DBG7) Signal recognition particle receptor alpha subunit| (SR-alpha) (Docking protein alpha) (DP-alpha) Length = 636 Score = 234 bits (596), Expect = 3e-61 Identities = 123/194 (63%), Positives = 145/194 (74%), Gaps = 13/194 (6%) Frame = -3 Query: 764 QHNLSVMMAACDTFRSGAVEQLRTHARRL-------------QIPIFEKGYEKDPAVVAK 624 ++ SV++AACDTFR+GAVEQLRTH RRL + +FEKGY KD A +A Sbjct: 442 ENGFSVLIAACDTFRAGAVEQLRTHTRRLTALHPPEKHGGRTMVQLFEKGYGKDAAGIAM 501 Query: 623 EAIQEATRNKSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQL 444 EAI A DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL Sbjct: 502 EAIAFARNQGFDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQL 561 Query: 443 NKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDL 264 KFN+ LAD S T RLIDGI+LTKFDTIDDKVGAA+SM YI+ P++FVG GQ+Y DL Sbjct: 562 VKFNRALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDL 621 Query: 263 KKLNVKSIVKTLLK 222 + LN K++V L+K Sbjct: 622 RSLNAKAVVAALMK 635
>SRPR_CANFA (P06625) Signal recognition particle receptor alpha subunit| (SR-alpha) (Docking protein alpha) (DP-alpha) Length = 638 Score = 231 bits (588), Expect = 2e-60 Identities = 121/194 (62%), Positives = 144/194 (74%), Gaps = 13/194 (6%) Frame = -3 Query: 764 QHNLSVMMAACDTFRSGAVEQLRTHARRLQ-------------IPIFEKGYEKDPAVVAK 624 ++ SV++AACDTFR+GAVE +RTH RRL + +FEKGY KD A +A Sbjct: 444 ENGFSVLIAACDTFRAGAVEHVRTHTRRLSALHPPEKHAGPTMVQLFEKGYGKDAAGIAM 503 Query: 623 EAIQEATRNKSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQL 444 EAI A DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL Sbjct: 504 EAIAFARNQGFDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQL 563 Query: 443 NKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDL 264 KFN+ LAD S T RLIDGI+LTKFDTIDDKVGAA+SM YI+ P++FVG GQ+Y DL Sbjct: 564 VKFNRALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDL 623 Query: 263 KKLNVKSIVKTLLK 222 + LN K++V L+K Sbjct: 624 RSLNAKAVVAALMK 637
>Y291_METJA (Q57739) Probable signal recognition particle protein MJ0291| Length = 409 Score = 140 bits (354), Expect = 3e-33 Identities = 81/179 (45%), Positives = 109/179 (60%) Frame = -3 Query: 764 QHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDV 585 Q SV++AA DTFR+GA+EQL HA+ + + + + D A V +AIQ A DV Sbjct: 228 QKGYSVVLAAGDTFRAGAIEQLEQHAKNVGVKVIKHKPGADSAAVIYDAIQHAKARGIDV 287 Query: 584 VLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTV 405 VL DTAGR N LM + K++ + KPDLV+FVG+AL GNDAV Q +FN+ Sbjct: 288 VLADTAGRQATNVNLMEEIKKVVRVTKPDLVIFVGDALTGNDAVYQAEEFNR-------- 339 Query: 404 PTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTL 228 A IDGI+LTK D D K GAALS+ Y G P++++G GQ Y DL + + +V+ L Sbjct: 340 --AVNIDGIILTKVDA-DAKGGAALSIGYAIGKPILYLGVGQRYQDLIEFDADWMVRKL 395
>SRPR_YEAST (P32916) Signal recognition particle receptor alpha subunit homolog| (SR-alpha) (Docking protein alpha) (DP-alpha) Length = 621 Score = 140 bits (354), Expect = 3e-33 Identities = 80/204 (39%), Positives = 113/204 (55%), Gaps = 24/204 (11%) Frame = -3 Query: 764 QHNLSVMMAACDTFRSGAVEQLRTHARRLQ----------------------IPIFEKGY 651 Q+N V++ ACDTFRSGAVEQLR H L + +FE GY Sbjct: 423 QNNFKVLIVACDTFRSGAVEQLRVHVENLAQLMDDSHVRGSKNKRGKTGNDYVELFEAGY 482 Query: 650 EKDPAV--VAKEAIQEATRNKSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGE 477 V +AK+AI+ + D+VL+DTAGR ++ LM L + KPD ++ VGE Sbjct: 483 GGSDLVTKIAKQAIKYSRDQNFDIVLMDTAGRRHNDPTLMSPLKSFADQAKPDKIIMVGE 542 Query: 476 ALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVM 297 ALVG D+V Q FN R +D +++K DT+ + +G ++MVY +G P++ Sbjct: 543 ALVGTDSVQQAKNFNDAFG------KGRNLDFFIISKCDTVGEMLGTMVNMVYATGIPIL 596 Query: 296 FVGCGQSYTDLKKLNVKSIVKTLL 225 FVG GQ+YTDL+ L+VK V TL+ Sbjct: 597 FVGVGQTYTDLRTLSVKWAVNTLM 620
>DOCK_SULAC (P27414) Probable signal recognition particle protein (Docking| protein) (P41) Length = 369 Score = 118 bits (296), Expect = 2e-26 Identities = 66/167 (39%), Positives = 98/167 (58%) Frame = -3 Query: 764 QHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDV 585 ++NLS ++AA DTFR+ A EQL HA +L++ + Y DPA VA +AI A DV Sbjct: 199 KNNLSTIIAASDTFRAAAQEQLAYHASKLEVQLIRGKYGADPASVAFDAISFAKSRNIDV 258 Query: 584 VLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTV 405 VL+DTAGRM + L+ L +++ + KPD + + ++L G+DA++Q F + Sbjct: 259 VLIDTAGRMHIDSDLVEELKRVLRIAKPDFRILILDSLAGSDALEQARHFENNVG----- 313 Query: 404 PTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDL 264 D ++LTK D D K G ALS+ Y PV+++G GQ+Y DL Sbjct: 314 -----YDAVILTKVDA-DAKGGIALSLAYELKKPVVYMGVGQNYDDL 354
>SRP54_STRMU (Q54431) Signal recognition particle protein (Fifty-four homolog)| Length = 516 Score = 113 bits (282), Expect = 7e-25 Identities = 57/168 (33%), Positives = 99/168 (58%) Frame = -3 Query: 764 QHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDV 585 + N +M A D +R A++QL+T +++ +P+F+ G E + + + +A N++D Sbjct: 128 EENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKENRNDY 187 Query: 584 VLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTV 405 VL+DTAGR+Q +E LM L + L P+ +L V ++++G +A + +FNQ+L Sbjct: 188 VLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE----- 242 Query: 404 PTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLK 261 + G++LTK D D + GAALS+ I+G P+ F G G+ TD++ Sbjct: 243 -----VTGVILTKIDG-DTRGGAALSVRQITGKPIKFTGTGEKITDIE 284
>SR543_HORVU (P49970) Signal recognition particle 54 kDa protein 3 (SRP54)| Length = 493 Score = 106 bits (264), Expect = 9e-23 Identities = 58/173 (33%), Positives = 92/173 (53%) Frame = -3 Query: 743 MAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDTAG 564 + DTFR+GA +QL+ +A + +IP + E DP +A E +++ + KSD++++DT+G Sbjct: 133 LVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGLEKFRQEKSDLIIIDTSG 192 Query: 563 RMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLID 384 R L + ++ KPDLV+FV + +G A DQ F Q + + Sbjct: 193 RHMQEAALFEEMRQVAEATKPDLVIFVMDGSIGQAAFDQAQAFKQSAS----------VG 242 Query: 383 GILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 225 +++TK D K G ALS V + SPV+F+G G+ D NV+ V LL Sbjct: 243 AVIVTKLDG-HAKGGGALSAVAATKSPVIFIGTGEHIDDFDVFNVEPFVARLL 294
>SRP54_SYNY3 (P74214) Signal recognition particle protein (Fifty-four homolog)| Length = 482 Score = 106 bits (264), Expect = 9e-23 Identities = 56/164 (34%), Positives = 98/164 (59%) Frame = -3 Query: 752 SVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVD 573 S +M A D +R A++QL+T +++ +P+F+ G + +P +A++ +++A D VL+D Sbjct: 130 SALMVATDVYRPAAIDQLKTLGQQIDVPVFDLGSDANPVEIARQGVEKAKELGVDTVLID 189 Query: 572 TAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTAR 393 TAGR+Q + +M L+++ + KPD L V +A+ G +A + + F++++ Sbjct: 190 TAGRLQIDPQMMAELAEIKQVVKPDDTLLVVDAMTGQEAANLTHTFHEQIG--------- 240 Query: 392 LIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLK 261 I G +LTK D D + GAALS+ ISG P+ FVG G+ L+ Sbjct: 241 -ITGAILTKLDG-DTRGGAALSVRQISGQPIKFVGVGEKVEALQ 282
>SRP54_BACSU (P37105) Signal recognition particle protein (Fifty-four homolog)| Length = 446 Score = 105 bits (262), Expect = 2e-22 Identities = 56/180 (31%), Positives = 100/180 (55%) Frame = -3 Query: 764 QHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDV 585 +HN M+ A D +R A++QL T ++L +P+F G + P +AK+AI++A D Sbjct: 128 KHNRKPMLVAADIYRPAAIKQLETLGKQLDMPVFSLGDQVSPVEIAKQAIEKAKEEHYDY 187 Query: 584 VLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTV 405 V++DTAGR+ + LM L+ + + P+ + V +++ G DAV+ FN++L Sbjct: 188 VILDTAGRLHIDHELMDELTNVKEIANPEEIFLVVDSMTGQDAVNVAKSFNEQLG----- 242 Query: 404 PTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 225 + G++LTK D D + GAALS+ ++ +P+ F G G+ L+ + + + +L Sbjct: 243 -----LTGVVLTKLDG-DTRGGAALSIRAVTNTPIKFAGLGEKLDALEPFHPERMASRIL 296
>SRP54_HELPY (P56005) Signal recognition particle protein (Fifty-four homolog)| Length = 448 Score = 105 bits (261), Expect = 2e-22 Identities = 69/210 (32%), Positives = 115/210 (54%), Gaps = 2/210 (0%) Frame = -3 Query: 758 NLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAV--VAKEAIQEATRNKSDV 585 N V++ ACD R AVEQL+ ++ + +F YE++ +V +A A++ A + DV Sbjct: 122 NKKVLLCACDLQRLAAVEQLKVLGEQVGVEVF---YEENKSVKEIASNALKRAKEAQFDV 178 Query: 584 VLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTV 405 +LVD+AGR+ ++ LM+ L ++ + P VL+V +AL G D V N FN+++ Sbjct: 179 LLVDSAGRLAIDKELMQELKEVKEILNPHEVLYVADALSGQDGVKSANTFNEEIG----- 233 Query: 404 PTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 225 + G++L+KFD+ D K G AL + Y G P+ F+G G+ DL + IV L+ Sbjct: 234 -----VSGVVLSKFDS-DSKGGIALGITYQLGLPLRFIGSGEKIPDLDVFVPERIVGRLM 287 Query: 224 K*NGSSTCRAPICAAYQRVSVISPNIPRDI 135 G+ + A + SV++PN +D+ Sbjct: 288 ---GAGDI---VSLAEKTASVLNPNEAKDL 311
>SR543_ARATH (P49967) Signal recognition particle 54 kDa protein 3 (SRP54)| Length = 495 Score = 103 bits (258), Expect = 4e-22 Identities = 57/173 (32%), Positives = 92/173 (53%) Frame = -3 Query: 743 MAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDTAG 564 + DTFR+GA +QL+ +A + +IP + E DP +A E + + D+++VDT+G Sbjct: 134 LVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDTFKKENCDLIIVDTSG 193 Query: 563 RMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLID 384 R + L + ++ KPDLV+FV ++ +G A DQ F Q +A + Sbjct: 194 RHKQEASLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVA----------VG 243 Query: 383 GILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 225 +++TK D K G ALS V + SPV+F+G G+ + + +VK V LL Sbjct: 244 AVIITKMDG-HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 295
>SR542_HORVU (P49969) Signal recognition particle 54 kDa protein 2 (SRP54)| Length = 497 Score = 103 bits (258), Expect = 4e-22 Identities = 56/173 (32%), Positives = 92/173 (53%) Frame = -3 Query: 743 MAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDTAG 564 + DTFR+GA +QL+ +A + +IP + E DP +A E ++ + SD++++DT+G Sbjct: 134 LVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGLERFRKENSDLIIIDTSG 193 Query: 563 RMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLID 384 R + L + ++ KPDLV+FV + +G A DQ F Q + + Sbjct: 194 RHKQEAALFEEMRQVAEATKPDLVIFVMDGSIGQAAFDQAQAFKQSAS----------VG 243 Query: 383 GILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 225 +++TK D K G ALS V + SPV+F+G G+ + + +VK V LL Sbjct: 244 AVIITKLDG-HAKGGGALSAVAATKSPVIFIGTGEHIDEFEIFDVKPFVSRLL 295
>SR541_HORVU (P49968) Signal recognition particle 54 kDa protein 1 (SRP54)| Length = 497 Score = 103 bits (258), Expect = 4e-22 Identities = 56/173 (32%), Positives = 92/173 (53%) Frame = -3 Query: 743 MAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDTAG 564 + DTFR+GA +QL+ +A + +IP + E DP +A E ++ + SD++++DT+G Sbjct: 134 LVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGLERFRKENSDLIIIDTSG 193 Query: 563 RMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLID 384 R + L + ++ KPDLV+FV + +G A DQ F Q + + Sbjct: 194 RHKQEAALFEEMRQVAEATKPDLVIFVMDGSIGQAAFDQAQAFKQSAS----------VG 243 Query: 383 GILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 225 +++TK D K G ALS V + SPV+F+G G+ + + +VK V LL Sbjct: 244 AVIITKLDG-HAKGGGALSAVAATKSPVIFIGTGEHIDEFEIFDVKPFVSRLL 295
>SRP54_SYNP7 (Q55311) Signal sequence-binding protein| Length = 485 Score = 103 bits (256), Expect = 8e-22 Identities = 54/176 (30%), Positives = 100/176 (56%) Frame = -3 Query: 752 SVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVD 573 S ++ A D +R A++QL T +++ +P+FE G + +P +A++ +++A + D V+VD Sbjct: 130 STLLVATDVYRPAAIDQLITLGKQIDVPVFELGSDANPVEIARQGVEKARQEGIDTVIVD 189 Query: 572 TAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTAR 393 TAGR+Q + +M L+++ P VL V ++++G +A F++++ Sbjct: 190 TAGRLQIDTEMMEELAQVKEAIAPHEVLLVVDSMIGQEAASLTRSFHERIG--------- 240 Query: 392 LIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 225 I G +LTK D D + GAALS+ +SG P+ FVG G+ L+ + + + +L Sbjct: 241 -ITGAILTKLDG-DSRGGAALSIRRVSGQPIKFVGLGEKVEALQPFHPERMASRIL 294
>SRP54_HELPJ (Q9ZK62) Signal recognition particle protein (Fifty-four homolog)| Length = 448 Score = 103 bits (256), Expect = 8e-22 Identities = 67/208 (32%), Positives = 111/208 (53%) Frame = -3 Query: 758 NLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVL 579 N V++ ACD R AVEQL+ ++ + +F + K +A A++ A + DV++ Sbjct: 122 NKKVLLCACDLQRLAAVEQLKVLGEQVGVEVFHEE-NKSVKEIANNALKRAKEAQFDVLI 180 Query: 578 VDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPT 399 VD+AGR+ ++ LM+ L ++ + P VL+V +AL G D V N FN+++ Sbjct: 181 VDSAGRLAIDKELMQELKEVKEVLNPHEVLYVADALSGQDGVKSANTFNEEIG------- 233 Query: 398 ARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLLK* 219 + G++L+KFD+ D K G AL + Y G P+ F+G G+ DL + IV L+ Sbjct: 234 ---VSGVVLSKFDS-DSKGGIALGITYQLGLPLRFIGSGEKIPDLDVFMPERIVGRLM-- 287 Query: 218 NGSSTCRAPICAAYQRVSVISPNIPRDI 135 G+ I A + SV++PN +D+ Sbjct: 288 -GAGDI---ISLAEKTASVLNPNEAKDL 311
>SRP54_MYCMY (Q01442) Signal recognition particle protein (Fifty-four homolog)| Length = 447 Score = 103 bits (256), Expect = 8e-22 Identities = 58/175 (33%), Positives = 98/175 (56%) Frame = -3 Query: 749 VMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDT 570 V++ D +R GA+EQL ++ +FEKG ++DP A++A++ A N DVV++DT Sbjct: 133 VLLVGLDIYRPGAIEQLVQLGQKTNTQVFEKG-KQDPVKTAEQALEYAKENNFDVVILDT 191 Query: 569 AGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTARL 390 AGR+Q ++ LM+ L L P+ +L V + + G + ++ N+FN KL Sbjct: 192 AGRLQVDQVLMKELDNLKKKTSPNEILLVVDGMSGQEIINVTNEFNDKLK---------- 241 Query: 389 IDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 225 + G+++TK D D + GA LS+ Y++ P+ F+G G+ Y L K + L+ Sbjct: 242 LSGVVVTKLDG-DARGGATLSISYLTKLPIKFIGEGEGYNALAAFYPKRMADRLM 295
>SR542_LYCES (P49972) Signal recognition particle 54 kDa protein 2 (SRP54)| Length = 499 Score = 103 bits (256), Expect = 8e-22 Identities = 56/173 (32%), Positives = 93/173 (53%) Frame = -3 Query: 743 MAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDTAG 564 + DTFR+GA +QL+ +A + +IP + E DP +A + ++ + D+++VDT+G Sbjct: 134 LVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVDGVETFKKENCDLIIVDTSG 193 Query: 563 RMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLID 384 R + L + ++ KPDLV+FV ++ +G A DQ F Q +A + Sbjct: 194 RHKQEAALFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVA----------VG 243 Query: 383 GILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 225 +++TK D K G ALS V + SPV+F+G G+ + + +VK V LL Sbjct: 244 AVIVTKMDG-HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 295
>SRP54_ENTHI (O15821) Signal recognition particle 54 kDa protein (SRP54)| Length = 487 Score = 102 bits (255), Expect = 1e-21 Identities = 54/173 (31%), Positives = 95/173 (54%) Frame = -3 Query: 743 MAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDTAG 564 + DTFR+GA EQL+ +A+R +P F E DP VA E ++ + K+D++LVDT+G Sbjct: 134 VVGADTFRAGAYEQLQMNAKRAGVPFFGIKEESDPVKVASEGVRTFRKEKNDIILVDTSG 193 Query: 563 RMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLID 384 R + ++ L + + + + KPD ++FV + +G A Q F + + Sbjct: 194 RHKQDKELFKEMQSVRDAIKPDSIIFVMDGAIGQAAFGQAKAFKDAVE----------VG 243 Query: 383 GILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 225 +++TK D G ALS V + SP++F+G G+ ++++ + +S V+ LL Sbjct: 244 SVIITKLDG-HSNGGGALSAVAATKSPIIFIGTGEKVNEIEEFDAESFVRQLL 295
>SR541_LYCES (P49971) Signal recognition particle 54 kDa protein 1 (SRP54)| Length = 496 Score = 102 bits (255), Expect = 1e-21 Identities = 57/174 (32%), Positives = 94/174 (54%), Gaps = 1/174 (0%) Frame = -3 Query: 743 MAACDTFRSGAVEQLRTHARRLQIPIFEKGY-EKDPAVVAKEAIQEATRNKSDVVLVDTA 567 + DTFR+GA +QL+ +A + +IP + Y E DP +A + ++ + D+++VDT+ Sbjct: 134 LVCADTFRAGAFDQLKQNATKAKIPFYGSSYTESDPVKIAVDGVETFKKENCDLIIVDTS 193 Query: 566 GRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLI 387 GR + L + ++ KPDLV+FV ++ +G A DQ F Q +A + Sbjct: 194 GRHKQEAALFEEMRQVSEAQKPDLVIFVMDSSIGQAAFDQAQAFRQSVA----------V 243 Query: 386 DGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 225 +++TK D K G ALS V + SPV+F+G G+ + + +VK V LL Sbjct: 244 GAVIVTKMDG-HAKGGGALSRVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 296
>SRP54_YEAST (P20424) Signal recognition particle 54 kDa protein homolog (SRP54)| Length = 541 Score = 102 bits (254), Expect = 1e-21 Identities = 60/180 (33%), Positives = 101/180 (56%) Frame = -3 Query: 764 QHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDV 585 + V + DTFR+GA +QL+ +A R +IP + E DPA VA+E I + + K D+ Sbjct: 135 KRGFKVGLVCADTFRAGAFDQLKQNAIRARIPFYGSYTETDPAKVAEEGINKFKKEKFDI 194 Query: 584 VLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTV 405 ++VDT+GR E L + + ++ N+ KP+ + V +A +G A +Q +K ++ +D Sbjct: 195 IIVDTSGRHHQEEELFQEMIEISNVIKPNQTIMVLDASIG-QAAEQQSKAFKESSDFG-- 251 Query: 404 PTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 225 I+LTK D + G A+S V + +P++F+G G+ DL+K + KS + LL Sbjct: 252 -------AIILTKMDG-HARGGGAISAVAATNTPIIFIGTGEHIHDLEKFSPKSFISKLL 303
>SRP54_BUCAI (P57473) Signal recognition particle protein (Fifty-four homolog)| Length = 451 Score = 101 bits (252), Expect = 2e-21 Identities = 56/180 (31%), Positives = 100/180 (55%) Frame = -3 Query: 764 QHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDV 585 ++ +++ + DT+R+ A+EQL+ + +++I FE P + K AI+ A DV Sbjct: 127 KYKKKILITSTDTYRAAAIEQLKILSDQIEIDFFESDKHHTPIEITKNAIKYAKLKLYDV 186 Query: 584 VLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTV 405 +L+DTAGR+ ++ +M + ++ ++K L + ++++G DA++ FN L Sbjct: 187 LLIDTAGRLHIDKKMMNEIQQIQVISKAIETLLIVDSMMGQDAINMAKIFNNDL------ 240 Query: 404 PTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 225 LI GI+LTK D D + G ALSM YI+G P+ F+G G+ L+ + + I +L Sbjct: 241 ----LISGIILTKTDG-DSRSGIALSMRYITGKPIKFIGTGEKIISLEPFHPERIADRIL 295
>SRP54_SCHPO (P21565) Signal recognition particle 54 kDa protein homolog (SRP54)| Length = 522 Score = 100 bits (250), Expect = 4e-21 Identities = 57/180 (31%), Positives = 99/180 (55%) Frame = -3 Query: 764 QHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDV 585 + L + A DTFR+GA +QL+ +A + ++P F E DP V+AKE + + ++ DV Sbjct: 127 RRGLKSCLVAADTFRAGAFDQLKQNAIKARVPYFGSYTETDPVVIAKEGVDKFKNDRFDV 186 Query: 584 VLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTV 405 ++VDT+GR Q + L + ++ + +PD + + +A +G A Q F ++ AD V Sbjct: 187 IIVDTSGRHQQEQELFAEMVEISDAIRPDQTIMILDASIGQAAESQSKAF-KETADFGAV 245 Query: 404 PTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 225 ++TK D K G ALS V + +P++F+G G+ DL++ + +S + LL Sbjct: 246 ---------IITKLDG-HAKGGGALSAVAATKTPIVFIGTGEHINDLERFSPRSFISKLL 295
>SR541_ARATH (P37106) Signal recognition particle 54 kDa protein 1 (SRP54)| Length = 479 Score = 99.8 bits (247), Expect = 8e-21 Identities = 54/173 (31%), Positives = 93/173 (53%) Frame = -3 Query: 743 MAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDTAG 564 + DTFR+GA +QL+ +A + +IP + E DP +A E + + K D+++VDT+G Sbjct: 134 LVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDRFKKEKCDLIIVDTSG 193 Query: 563 RMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLID 384 R + L + ++ +PDLV+FV ++ +G A +Q F + ++ + Sbjct: 194 RHKQAASLFEEMRQVAEATEPDLVIFVMDSSIGQAAFEQAEAFKETVS----------VG 243 Query: 383 GILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 225 +++TK D K G ALS V + SPV+F+G G+ + + +VK V LL Sbjct: 244 AVIITKMDG-HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 295
>SR54C_ARATH (P37107) Signal recognition particle 54 kDa protein, chloroplast| precursor (SRP54) (54 chloroplast protein) (54CP) (FFC) Length = 564 Score = 98.6 bits (244), Expect = 2e-20 Identities = 57/164 (34%), Positives = 92/164 (56%) Frame = -3 Query: 752 SVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVD 573 S M+ A D +R A++QL ++ +P++ G + PA +AK+ ++EA +N DVV++D Sbjct: 206 SCMLIAGDVYRPAAIDQLVILGEQVGVPVYTAGTDVKPADIAKQGLKEAKKNNVDVVIMD 265 Query: 572 TAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTAR 393 TAGR+Q ++ +M L + P VL V +A+ G +A + FN ++ Sbjct: 266 TAGRLQIDKGMMDELKDVKKFLNPTEVLLVVDAMTGQEAAALVTTFNVEIG--------- 316 Query: 392 LIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLK 261 I G +LTK D D + GAALS+ +SG P+ VG G+ DL+ Sbjct: 317 -ITGAILTKLDG-DSRGGAALSVKEVSGKPIKLVGRGERMEDLE 358
>SR542_ARATH (P49966) Signal recognition particle 54 kDa protein 2 (SRP54)| Length = 495 Score = 96.3 bits (238), Expect = 9e-20 Identities = 53/173 (30%), Positives = 89/173 (51%) Frame = -3 Query: 743 MAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDTAG 564 + DTFR+GA +QL+ +A + +IP + DP +A E + + D+++VDT+G Sbjct: 134 LVCADTFRAGAFDQLKQNATKSKIPYYGSYTGSDPVKIAVEGVDRFKKENCDLIIVDTSG 193 Query: 563 RMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLID 384 R + L + ++ KPDLV+FV ++ +G A +Q F Q +A + Sbjct: 194 RHKQQASLFEEMRQISEATKPDLVIFVMDSSIGQTAFEQARAFKQTVA----------VG 243 Query: 383 GILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 225 +++TK D K G LS V + SPV+F+G G+ + + + K V LL Sbjct: 244 AVIITKMDG-HAKGGGTLSAVAATKSPVIFIGTGEHMDEFEVFDAKPFVSRLL 295
>SRP54_BUCAP (Q8K9F7) Signal recognition particle protein (Fifty-four homolog)| Length = 450 Score = 95.5 bits (236), Expect = 2e-19 Identities = 51/180 (28%), Positives = 102/180 (56%) Frame = -3 Query: 764 QHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDV 585 ++ ++ + D +R+ A++QL+ + +++I + + P + KEAI+ A D+ Sbjct: 127 KYKKKILTVSTDIYRAAAIKQLQILSDQVKIDFYLSDTTQTPINITKEAIEHAKLKLYDL 186 Query: 584 VLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTV 405 +L+DTAGR+ N +M ++ + N++KP L + ++++G DA++ KF+ L+ Sbjct: 187 LLIDTAGRLHINTEMMNEINTIQNISKPIETLLIVDSMMGQDAINIAKKFSASLS----- 241 Query: 404 PTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 225 I GI++TK D+ D + G ALS+ +I+G P+ F+G G+ L+ + + I +L Sbjct: 242 -----ISGIVITKTDS-DARSGVALSIRHITGKPIKFIGTGEKLHQLEPFHPERIADRIL 295
>SRP54_RICCN (Q92J55) Signal recognition particle protein (Fifty-four homolog)| Length = 449 Score = 94.4 bits (233), Expect = 4e-19 Identities = 59/178 (33%), Positives = 95/178 (53%) Frame = -3 Query: 758 NLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVL 579 N V++ + DT+R A EQL A +QI + P + K AI EA + DVV+ Sbjct: 130 NKKVLLVSLDTYRPAAQEQLAILANSVQINSLPIVQGEKPLDIVKRAIAEAKISAYDVVI 189 Query: 578 VDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPT 399 DTAGR Q ++ +M + + +P L V +++ G DAV + FN+KLA Sbjct: 190 YDTAGRTQIDKAMMEEALAIKKIVEPTETLLVIDSMTGQDAVVTASSFNEKLA------- 242 Query: 398 ARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 225 I G++L++ D D K GAALS+ YI+ P+ F+ G++ DL++ + + + +L Sbjct: 243 ---ISGLILSRIDG-DSKGGAALSVKYITKKPIKFLSSGENLIDLEEFDAERLASRIL 296
>SRP54_GEOCY (Q8MZJ6) Signal recognition particle 54 kDa protein (SRP54)| Length = 499 Score = 94.4 bits (233), Expect = 4e-19 Identities = 50/173 (28%), Positives = 91/173 (52%) Frame = -3 Query: 743 MAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDTAG 564 + DTFR+GA +QL+ +A + ++P + E DP V+A+E +++ + +V++VDT+G Sbjct: 133 LVCADTFRAGAFDQLKQNATKARVPFYGSYTEMDPVVIAQEGVEKFKEDSFEVIIVDTSG 192 Query: 563 RMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLID 384 R + E L + ++ PD ++FV + +G Q F +K+ + Sbjct: 193 RHKQEESLFEEMLQVSQAIDPDNIIFVMDGTIGQACESQARAFKEKVD----------VA 242 Query: 383 GILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 225 +++TK D K G ALS V + SP++F+G G+ +++ K V LL Sbjct: 243 SVIVTKLDG-HAKGGGALSAVAATRSPIIFIGTGEHIDEMEPFKTKPFVSKLL 294
>FTSY_BUCAP (Q8KA77) Cell division protein ftsY homolog| Length = 351 Score = 94.0 bits (232), Expect = 5e-19 Identities = 55/181 (30%), Positives = 95/181 (52%), Gaps = 6/181 (3%) Frame = -3 Query: 752 SVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVD 573 SVM+AA DTFR+ +EQL+ +R IP+ + DPA VA +A++ A K DV+++D Sbjct: 179 SVMLAAADTFRAAGIEQLQILGKRNNIPVISQSSGSDPASVAFDAVKSAISKKIDVLIID 238 Query: 572 TAGRMQDNEPLMRALSKLI------NLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLS 411 TAGR+ + L+ L K++ NL+ P ++ + +A G + + Q F++ + Sbjct: 239 TAGRLHNKLHLLEELKKMVRVIKKLNLSAPHEIMLIIDACNGQNTIKQTEMFHKAIN--- 295 Query: 410 TVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKT 231 + G+++TK D K G S+ P+ ++G G+ TDL N +K+ Sbjct: 296 -------LTGLVITKLDG-TAKGGVIFSLANQFLIPIRYIGIGEKTTDLVVFNSNDFIKS 347 Query: 230 L 228 + Sbjct: 348 I 348
>SRP54_BUCBP (Q89AE4) Signal recognition particle protein (Fifty-four homolog)| Length = 450 Score = 93.6 bits (231), Expect = 6e-19 Identities = 50/180 (27%), Positives = 97/180 (53%) Frame = -3 Query: 764 QHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDV 585 ++ V++ + D +R A++QL+ +++ +I F + P + + AIQ A DV Sbjct: 127 KYKKKVIVTSIDIYRLAAIKQLKMLSKQAKISFFPSNNTQSPKDIVQHAIQHAKLKFYDV 186 Query: 584 VLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTV 405 +L+DTAGR+Q ++ +M L + N++ P FV +A+ G D+++ +N+FN+ L Sbjct: 187 LLIDTAGRLQIDKKMMNELLDVYNISHPIETFFVADAMFGQDSINVINEFNKYLP----- 241 Query: 404 PTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 225 + ++TK D+ D + G LS+ Y++ P+ F+G G+ +L+ I +L Sbjct: 242 -----VSSFIITKTDS-DTRAGIILSIKYLTKKPIKFIGTGEKLEELELFYPDRIASRIL 295
>SRP54_ECOLI (P0AGD7) Signal recognition particle protein (Fifty-four homolog)| (p48) Length = 453 Score = 93.2 bits (230), Expect = 8e-19 Identities = 56/180 (31%), Positives = 94/180 (52%) Frame = -3 Query: 764 QHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDV 585 +H V++ + D +R A++QL T A ++ + F + P + A++EA DV Sbjct: 127 KHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVGQKPVDIVNAALKEAKLKFYDV 186 Query: 584 VLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTV 405 +LVDTAGR+ +E +M + ++ P LFV +A+ G DA + FN+ L Sbjct: 187 LLVDTAGRLHVDEAMMDEIKQVHASINPVETLFVVDAMTGQDAANTAKAFNEALP----- 241 Query: 404 PTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 225 + G++LTK D D + GAALS+ +I+G P+ F+G G+ L+ + I +L Sbjct: 242 -----LTGVVLTKVDG-DARGGAALSIRHITGKPIKFLGVGEKTEALEPFHPDRIASRIL 295
>SRP54_ECOL6 (P0AGD8) Signal recognition particle protein (Fifty-four homolog)| Length = 453 Score = 93.2 bits (230), Expect = 8e-19 Identities = 56/180 (31%), Positives = 94/180 (52%) Frame = -3 Query: 764 QHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDV 585 +H V++ + D +R A++QL T A ++ + F + P + A++EA DV Sbjct: 127 KHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVGQKPVDIVNAALKEAKLKFYDV 186 Query: 584 VLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTV 405 +LVDTAGR+ +E +M + ++ P LFV +A+ G DA + FN+ L Sbjct: 187 LLVDTAGRLHVDEAMMDEIKQVHASINPVETLFVVDAMTGQDAANTAKAFNEALP----- 241 Query: 404 PTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 225 + G++LTK D D + GAALS+ +I+G P+ F+G G+ L+ + I +L Sbjct: 242 -----LTGVVLTKVDG-DARGGAALSIRHITGKPIKFLGVGEKTEALEPFHPDRIASRIL 295
>SRP54_ECO57 (P0AGD9) Signal recognition particle protein (Fifty-four homolog)| Length = 453 Score = 93.2 bits (230), Expect = 8e-19 Identities = 56/180 (31%), Positives = 94/180 (52%) Frame = -3 Query: 764 QHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDV 585 +H V++ + D +R A++QL T A ++ + F + P + A++EA DV Sbjct: 127 KHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVGQKPVDIVNAALKEAKLKFYDV 186 Query: 584 VLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTV 405 +LVDTAGR+ +E +M + ++ P LFV +A+ G DA + FN+ L Sbjct: 187 LLVDTAGRLHVDEAMMDEIKQVHASINPVETLFVVDAMTGQDAANTAKAFNEALP----- 241 Query: 404 PTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 225 + G++LTK D D + GAALS+ +I+G P+ F+G G+ L+ + I +L Sbjct: 242 -----LTGVVLTKVDG-DARGGAALSIRHITGKPIKFLGVGEKTEALEPFHPDRIASRIL 295
>FTSY_ECOLI (P10121) Cell division protein ftsY| Length = 497 Score = 93.2 bits (230), Expect = 8e-19 Identities = 62/185 (33%), Positives = 91/185 (49%), Gaps = 6/185 (3%) Frame = -3 Query: 764 QHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDV 585 Q SVM+AA DTFR+ AVEQL+ +R IP+ + D A V +AIQ A DV Sbjct: 319 QQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVIAQHTGADSASVIFDAIQAAKARNIDV 378 Query: 584 VLVDTAGRMQDNEPLMRALSKLINLNK------PDLVLFVGEALVGNDAVDQLNKFNQKL 423 ++ DTAGR+Q+ LM L K++ + K P V+ +A G +AV Q F++ + Sbjct: 379 LIADTAGRLQNKSHLMEELKKIVRVMKKLDVEAPHEVMLTIDASTGQNAVSQAKLFHEAV 438 Query: 422 ADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKS 243 + GI LTK D K G S+ G P+ ++G G+ DL+ Sbjct: 439 G----------LTGITLTKLDG-TAKGGVIFSVADQFGIPIRYIGVGERIEDLRPFKADD 487 Query: 242 IVKTL 228 ++ L Sbjct: 488 FIEAL 492
>FTSY_HAEIN (P44870) Cell division protein ftsY homolog| Length = 414 Score = 92.4 bits (228), Expect = 1e-18 Identities = 58/181 (32%), Positives = 91/181 (50%), Gaps = 6/181 (3%) Frame = -3 Query: 752 SVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVD 573 SVM+AA DTFR+ AVEQL+ R IP+ + D A V +A+Q A D+++ D Sbjct: 239 SVMLAAGDTFRAAAVEQLQVWGERNHIPVVAQSTGSDSASVIFDAMQSAAARNIDILIAD 298 Query: 572 TAGRMQDNEPLMRALSKLINLNK------PDLVLFVGEALVGNDAVDQLNKFNQKLADLS 411 TAGR+Q+ LM L K++ + K P ++ +A G +A+ Q FN+ + Sbjct: 299 TAGRLQNKNNLMDELKKIVRVMKKYDETAPHEIMLTLDAGTGQNAISQAKLFNEAVG--- 355 Query: 410 TVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKT 231 + GI LTK D K G ++ P+ ++G G+ DL++ N K ++ Sbjct: 356 -------LTGISLTKLDG-TAKGGVIFAIADQFKLPIRYIGVGEKIEDLREFNAKEFIEA 407 Query: 230 L 228 L Sbjct: 408 L 408
>SRP54_PONPY (Q5R4R6) Signal recognition particle 54 kDa protein (SRP54)| Length = 504 Score = 92.0 bits (227), Expect = 2e-18 Identities = 48/173 (27%), Positives = 90/173 (52%) Frame = -3 Query: 743 MAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDTAG 564 + DTFR+GA +QL+ +A + +IP + E DP ++A E +++ ++++VDT+G Sbjct: 134 LICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFKNENFEIIIVDTSG 193 Query: 563 RMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLID 384 R + + L + ++ N +PD +++V +A +G Q F K+ + Sbjct: 194 RHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAFKDKVD----------VA 243 Query: 383 GILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 225 +++TK D K G ALS V + SP++F+G G+ D + + + LL Sbjct: 244 SVIVTKLDG-HAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLL 295
>SRP54_MACFA (Q4R965) Signal recognition particle 54 kDa protein (SRP54)| Length = 504 Score = 92.0 bits (227), Expect = 2e-18 Identities = 48/173 (27%), Positives = 90/173 (52%) Frame = -3 Query: 743 MAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDTAG 564 + DTFR+GA +QL+ +A + +IP + E DP ++A E +++ ++++VDT+G Sbjct: 134 LICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFKNENFEIIIVDTSG 193 Query: 563 RMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLID 384 R + + L + ++ N +PD +++V +A +G Q F K+ + Sbjct: 194 RHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAFKDKVD----------VA 243 Query: 383 GILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 225 +++TK D K G ALS V + SP++F+G G+ D + + + LL Sbjct: 244 SVIVTKLDG-HAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLL 295
>SRP54_HUMAN (P61011) Signal recognition particle 54 kDa protein (SRP54)| Length = 504 Score = 92.0 bits (227), Expect = 2e-18 Identities = 48/173 (27%), Positives = 90/173 (52%) Frame = -3 Query: 743 MAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDTAG 564 + DTFR+GA +QL+ +A + +IP + E DP ++A E +++ ++++VDT+G Sbjct: 134 LICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFKNENFEIIIVDTSG 193 Query: 563 RMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLID 384 R + + L + ++ N +PD +++V +A +G Q F K+ + Sbjct: 194 RHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAFKDKVD----------VA 243 Query: 383 GILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 225 +++TK D K G ALS V + SP++F+G G+ D + + + LL Sbjct: 244 SVIVTKLDG-HAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLL 295
>SRP54_CANFA (P61010) Signal recognition particle 54 kDa protein (SRP54)| Length = 504 Score = 92.0 bits (227), Expect = 2e-18 Identities = 48/173 (27%), Positives = 90/173 (52%) Frame = -3 Query: 743 MAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDTAG 564 + DTFR+GA +QL+ +A + +IP + E DP ++A E +++ ++++VDT+G Sbjct: 134 LICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFKNENFEIIIVDTSG 193 Query: 563 RMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLID 384 R + + L + ++ N +PD +++V +A +G Q F K+ + Sbjct: 194 RHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAFKDKVD----------VA 243 Query: 383 GILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 225 +++TK D K G ALS V + SP++F+G G+ D + + + LL Sbjct: 244 SVIVTKLDG-HAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLL 295
>FTSY_RICPR (O05948) Cell division protein ftsY homolog| Length = 303 Score = 91.7 bits (226), Expect = 2e-18 Identities = 57/181 (31%), Positives = 93/181 (51%), Gaps = 6/181 (3%) Frame = -3 Query: 749 VMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDT 570 V +AACDTFR+ A+ QL + R + DPA VA AI+E+ + D++ +DT Sbjct: 132 VAVAACDTFRAAAINQLSSWVHRANALLITGKASADPASVAYRAIEESIKQNIDILFIDT 191 Query: 569 AGRMQDNEPLMRALSKLINL------NKPDLVLFVGEALVGNDAVDQLNKFNQKLADLST 408 AGR+ +N+ LM LSK++ + N P + + +A+ G + +Q+ FN D++ Sbjct: 192 AGRLHNNKNLMDELSKIVKVIKKLDENAPTHSILIIDAITGQNTYNQIEYFN----DVTN 247 Query: 407 VPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTL 228 + G+++TK D K G + V PV F+G G+ DLK N ++L Sbjct: 248 ------LTGLIVTKLDG-SAKAGVLVGAVQKFNLPVYFIGIGEKIEDLKIFNRHDFSRSL 300 Query: 227 L 225 + Sbjct: 301 V 301
>SRP54_RAT (Q6AYB5) Signal recognition particle 54 kDa protein (SRP54)| Length = 504 Score = 91.7 bits (226), Expect = 2e-18 Identities = 48/173 (27%), Positives = 90/173 (52%) Frame = -3 Query: 743 MAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDTAG 564 + DTFR+GA +QL+ +A + +IP + E DP ++A E +++ ++++VDT+G Sbjct: 134 LICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFKNENFEIIIVDTSG 193 Query: 563 RMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLID 384 R + + L + ++ N +PD +++V +A +G Q F K+ + Sbjct: 194 RHKQEDSLFEEMLQVSNAIQPDNIVYVMDASIGQACEAQAKAFKDKVD----------VA 243 Query: 383 GILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 225 +++TK D K G ALS V + SP++F+G G+ D + + + LL Sbjct: 244 SVIVTKLDG-HAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLL 295
>SRP54_MOUSE (P14576) Signal recognition particle 54 kDa protein (SRP54)| Length = 504 Score = 91.7 bits (226), Expect = 2e-18 Identities = 48/173 (27%), Positives = 90/173 (52%) Frame = -3 Query: 743 MAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDTAG 564 + DTFR+GA +QL+ +A + +IP + E DP ++A E +++ ++++VDT+G Sbjct: 134 LICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFKNENFEIIIVDTSG 193 Query: 563 RMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLID 384 R + + L + ++ N +PD +++V +A +G Q F K+ + Sbjct: 194 RHKQEDSLFEEMLQVSNAIQPDNIVYVMDASIGQACEAQAKAFKDKVD----------VA 243 Query: 383 GILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 225 +++TK D K G ALS V + SP++F+G G+ D + + + LL Sbjct: 244 SVIVTKLDG-HAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLL 295
>SRP54_THEAQ (O07347) Signal recognition particle protein (Fifty-four homolog)| Length = 429 Score = 91.3 bits (225), Expect = 3e-18 Identities = 53/156 (33%), Positives = 87/156 (55%) Frame = -3 Query: 746 MMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDTA 567 ++ A DT R A EQLR ++ +P+ E + P + + ++A D++LVDTA Sbjct: 129 LLVAADTQRPAAREQLRLLGEKVGVPVLEVMDGESPESIRRRVEEKARLEARDLILVDTA 188 Query: 566 GRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLI 387 GR+Q +EPLM L++L + PD VL V +A+ G +A+ F++K+ + Sbjct: 189 GRLQIDEPLMGELARLKEVLGPDEVLLVLDAMTGQEALSVARAFDEKVG----------V 238 Query: 386 DGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQ 279 G++LTK D D + GAALS +++G P+ F G + Sbjct: 239 TGLVLTKLDG-DARGGAALSARHVTGKPIYFAGVSE 273
>SRP54_HAEIN (P44518) Signal recognition particle protein (Fifty-four homolog)| Length = 462 Score = 91.3 bits (225), Expect = 3e-18 Identities = 53/180 (29%), Positives = 94/180 (52%) Frame = -3 Query: 764 QHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDV 585 +H V++ + D +R A++QL T A+ + + F +++P +AK A+ +A DV Sbjct: 127 RHKKKVLVVSADVYRPAAIKQLETLAQSVGVDFFPSDVKQNPVDIAKSALADAKLKFYDV 186 Query: 584 VLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTV 405 ++VDTAGR+ + +M + ++ P LF +A+ G DA + FN+ L Sbjct: 187 LIVDTAGRLHVDTEMMDEIKQVHAALNPIETLFTVDAMTGQDAANTAKAFNEALP----- 241 Query: 404 PTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 225 + G++LTK D D + GAALS+ I+G P+ F+G G+ L+ + + +L Sbjct: 242 -----LTGVILTKVDG-DARGGAALSIRQITGKPIKFLGVGEKTEALEPFHPDRVASRIL 295
>SRP54_YARLI (Q99150) Signal recognition particle 54 kDa protein homolog (SRP54)| Length = 536 Score = 90.5 bits (223), Expect = 5e-18 Identities = 55/180 (30%), Positives = 88/180 (48%) Frame = -3 Query: 764 QHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDV 585 + V + DTFR+GA +QL+ +A + +IP F E DP VA E + + + K ++ Sbjct: 129 RRGFKVGLVCADTFRAGAFDQLKQNATKAKIPFFGSYTETDPVAVAAEGVAKFKKEKFEI 188 Query: 584 VLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTV 405 ++VDT+GR + L + + KPD + V +A +G A Q F Sbjct: 189 IIVDTSGRHRQESELFTEMVDIGAAVKPDSTIMVLDASIGQAAEPQSRAFKD-------- 240 Query: 404 PTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 225 A I+LTK D K G A+S V + +P++F+G G+ DL+ + K + LL Sbjct: 241 --ASDFGSIILTKMDG-HAKGGGAISAVAATNTPIIFIGTGEHIHDLEAFSPKQFISKLL 297
>FTSY_AQUAE (O67066) Cell division protein ftsY homolog| Length = 461 Score = 90.1 bits (222), Expect = 7e-18 Identities = 60/187 (32%), Positives = 93/187 (49%), Gaps = 6/187 (3%) Frame = -3 Query: 764 QHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDV 585 Q V++ A DTFR+ A+EQL A+R + I +K DP V E +++A +V Sbjct: 286 QKGKKVLLVAGDTFRAAAIEQLEVWAKRAGVDIVKKEEGSDPGAVVYEGMKKAKEEGYEV 345 Query: 584 VLVDTAGRMQDNEPLMRALSKL------INLNKPDLVLFVGEALVGNDAVDQLNKFNQKL 423 VLVDTAGR+ EPL+ L K+ + +P L V +A G +A+ Q F + + Sbjct: 346 VLVDTAGRLHTKEPLINELRKIKKVIQKFDKEEPSETLLVIDATTGQNAIQQAKVFKEAV 405 Query: 422 ADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKS 243 I GI++TK D K GA +++ P+ VG G+ DL+ + + Sbjct: 406 D----------ITGIVVTKLDG-SAKGGAVVAICRELKIPIKLVGVGEGIDDLQPFDADA 454 Query: 242 IVKTLLK 222 V+ LL+ Sbjct: 455 YVEALLE 461
>FTSY_BACSU (P51835) Cell division protein ftsY homolog| Length = 329 Score = 89.4 bits (220), Expect = 1e-17 Identities = 61/182 (33%), Positives = 93/182 (51%), Gaps = 6/182 (3%) Frame = -3 Query: 764 QHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDV 585 Q SV++AA DTFR+GA+EQL R +P+ ++ DPA V +A+ A +DV Sbjct: 146 QEGKSVVLAAGDTFRAGAIEQLEVWGERTGVPVIKQTAGSDPAAVIYDAVHAAKARNADV 205 Query: 584 VLVDTAGRMQDNEPLMRALSKLINL------NKPDLVLFVGEALVGNDAVDQLNKFNQKL 423 ++ DTAGR+Q+ LM+ L K+ + P VL +A G +A+ Q +F++ Sbjct: 206 LICDTAGRLQNKVNLMKELEKVKRVIEREVPEAPHEVLLALDATTGQNAMAQAKEFSK-- 263 Query: 422 ADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKS 243 A + GI LTK D K G L++ PV VG G+ DL++ + +S Sbjct: 264 --------ATNVTGIALTKLDG-TAKGGIVLAIRNELHIPVKLVGLGEKVDDLQEFDPES 314 Query: 242 IV 237 V Sbjct: 315 YV 316
>SRP54_RICPR (Q9ZDZ0) Signal recognition particle protein (Fifty-four homolog)| Length = 449 Score = 89.0 bits (219), Expect = 1e-17 Identities = 57/178 (32%), Positives = 90/178 (50%) Frame = -3 Query: 758 NLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVL 579 N V++ + DT+R A EQL A + I + P + K AI EA + DVV+ Sbjct: 130 NKKVLLVSLDTYRPAAQEQLAIIANSVNIDSLPIVKGEKPLDIVKRAIGEAQISAYDVVI 189 Query: 578 VDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPT 399 DTAGR+Q + +M + + P L V +++ G DAV F++KL Sbjct: 190 YDTAGRIQIDNVMMEEALAIKKILNPTETLLVIDSMTGQDAVITAKTFSEKLE------- 242 Query: 398 ARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 225 I G++L++ D D K GAALS+ Y + P+ F+ G+ TDL++ N + + +L Sbjct: 243 ---ISGLILSRIDG-DTKGGAALSVKYFTQKPIKFLSSGEKLTDLEEFNAERLASRIL 296
>SRP54_PYRFU (Q8U070) Signal recognition 54 kDa protein (SRP54)| Length = 443 Score = 88.2 bits (217), Expect = 3e-17 Identities = 57/175 (32%), Positives = 88/175 (50%) Frame = -3 Query: 749 VMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDT 570 V + DT+R GA QLR R I +F EKD +AKE + D+++VDT Sbjct: 131 VGVVCSDTWRPGAYHQLRQLLDRYHIEVFGNPQEKDAIKLAKEGVDYFKSKGVDIIIVDT 190 Query: 569 AGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTARL 390 AGR ++++ L+ + ++ N+ P V+ V + +G A +NQ LA P Sbjct: 191 AGRHKEDKALIEEMKQISNVIHPHEVILVIDGTIGQQA------YNQALAFKEATP---- 240 Query: 389 IDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 225 I I++TK D K G ALS V +G+P+ F+G G+ D++ + V LL Sbjct: 241 IGSIIVTKLDG-SAKGGGALSAVAATGAPIKFIGTGEKIDDIEPFDPPRFVSRLL 294
>SRP54_MYCTU (P66844) Signal recognition particle protein (Fifty-four homolog)| Length = 525 Score = 87.8 bits (216), Expect = 3e-17 Identities = 59/168 (35%), Positives = 84/168 (50%), Gaps = 8/168 (4%) Frame = -3 Query: 746 MMAACDTFRSGAVEQLRTHARRLQIPIF--------EKGYEKDPAVVAKEAIQEATRNKS 591 ++ ACD R AV QL+ R +P+F E G DP VA + EA Sbjct: 132 LLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESG-PGDPVAVAAAGLAEARAKHF 190 Query: 590 DVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLS 411 DVV+VDTAGR+ +E LM + + + PD VLFV +A++G DAV F + + Sbjct: 191 DVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQDAVTTAAAFGEGVG--- 247 Query: 410 TVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTD 267 G+ LTK D D + GAALS+ ++G P++F G+ D Sbjct: 248 -------FTGVALTKLDG-DARGGAALSVREVTGVPILFASTGEKLED 287
>SRP54_MYCBO (P66845) Signal recognition particle protein (Fifty-four homolog)| Length = 525 Score = 87.8 bits (216), Expect = 3e-17 Identities = 59/168 (35%), Positives = 84/168 (50%), Gaps = 8/168 (4%) Frame = -3 Query: 746 MMAACDTFRSGAVEQLRTHARRLQIPIF--------EKGYEKDPAVVAKEAIQEATRNKS 591 ++ ACD R AV QL+ R +P+F E G DP VA + EA Sbjct: 132 LLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESG-PGDPVAVAAAGLAEARAKHF 190 Query: 590 DVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLS 411 DVV+VDTAGR+ +E LM + + + PD VLFV +A++G DAV F + + Sbjct: 191 DVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQDAVTTAAAFGEGVG--- 247 Query: 410 TVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTD 267 G+ LTK D D + GAALS+ ++G P++F G+ D Sbjct: 248 -------FTGVALTKLDG-DARGGAALSVREVTGVPILFASTGEKLED 287
>SRP54_METKA (Q8TUY9) Signal recognition 54 kDa protein (SRP54)| Length = 447 Score = 87.8 bits (216), Expect = 3e-17 Identities = 62/175 (35%), Positives = 93/175 (53%) Frame = -3 Query: 749 VMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDT 570 V + D +R A EQLR A + +P+ + + D AV EA +++ DVV+VDT Sbjct: 132 VGLVGADPYRPAAGEQLRQLAEEVDVPVHVE--DVDDAVEMAVKGVEALKDECDVVIVDT 189 Query: 569 AGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTARL 390 AGR + +E L+ L ++ +P VL V +A VG A D F++ A Sbjct: 190 AGRDRLSEDLIDELREMAERIEPHEVLLVLDATVGQKAGDHAEAFHE----------AVQ 239 Query: 389 IDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 225 + G+++TK DT K G ALS V +G+P+ FVG G+ DL++ N +S V LL Sbjct: 240 LTGVVITKLDTA-AKGGGALSAVARTGAPIKFVGTGERVDDLEEFNPRSFVARLL 293
>SRP54_METJA (Q57565) Signal recognition 54 kDa protein (SRP54)| Length = 451 Score = 87.8 bits (216), Expect = 3e-17 Identities = 52/181 (28%), Positives = 95/181 (52%), Gaps = 1/181 (0%) Frame = -3 Query: 764 QHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIF-EKGYEKDPAVVAKEAIQEATRNKSD 588 + L + A DT+R A EQL+ A ++ +PI+ ++ K P + KE +++ K+D Sbjct: 126 KRGLKPALIAADTYRPAAYEQLKQLAEKIHVPIYGDETRTKSPVDIVKEGMEKF--KKAD 183 Query: 587 VVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLST 408 V+++DTAGR ++ + L+ + ++ + PD ++ V + +G A Q F + + + Sbjct: 184 VLIIDTAGRHKEEKGLLEEMKQIKEITNPDEIILVIDGTIGQQAGIQAKAFKEAVGE--- 240 Query: 407 VPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTL 228 I I++TK D K G ALS V + +P+ F+G G+ DL+ + K + L Sbjct: 241 ------IGSIIVTKLDG-SAKGGGALSAVAETKAPIKFIGIGEGIDDLEPFDPKKFISRL 293 Query: 227 L 225 L Sbjct: 294 L 294
>SRP54_ACIAM (P70722) Signal recognition 54 kDa protein (SRP54) (Fragment)| Length = 451 Score = 87.8 bits (216), Expect = 3e-17 Identities = 54/177 (30%), Positives = 91/177 (51%), Gaps = 2/177 (1%) Frame = -3 Query: 749 VMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDT 570 V + D +R A+EQL+ +++ +P++ + EKD +AK +++ K ++++VDT Sbjct: 129 VGLVGADVYRPAALEQLQQLGQQIGVPVYGEPGEKDAVGIAKRGVEKFLSEKMEIIIVDT 188 Query: 569 AGR--MQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTA 396 AGR + L+ + + KPD V V +A +G A D +KFNQ A Sbjct: 189 AGRHGYGEEAALLEEMKNIYEAIKPDEVTLVIDASIGQKAYDLASKFNQ----------A 238 Query: 395 RLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 225 I I++TK D K G ALS V +G+ + F+G G+ +L+ N + V +L Sbjct: 239 SKIGTIIITKMDG-TAKGGGALSAVAATGATIKFIGTGEKIDELEVFNPRRFVARIL 294
>SRP54_SULSO (Q97ZE7) Signal recognition 54 kDa protein (SRP54)| Length = 447 Score = 86.7 bits (213), Expect = 7e-17 Identities = 51/177 (28%), Positives = 93/177 (52%), Gaps = 2/177 (1%) Frame = -3 Query: 749 VMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDT 570 V + A D +R A +QL ++ + ++ + ++P +AK+ + +NK D+++VDT Sbjct: 127 VGLVAADVYRPAAYDQLLQLGNQIGVQVYGEPNNQNPIEIAKKGVDIFVKNKMDIIIVDT 186 Query: 569 AGR--MQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTA 396 AGR + L+ + ++ ++ KPD V+ V +A +G A D ++F+Q A Sbjct: 187 AGRHGYGEETKLLEEMKEMYDVLKPDDVILVIDASIGQKAYDLASRFHQ----------A 236 Query: 395 RLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 225 I +++TK D K G ALS V +G+ + F+G G+ +L+ N K V +L Sbjct: 237 SPIGSVIITKMDG-TAKGGGALSAVVATGATIKFIGTGEKIDELETFNAKRFVSRIL 292
>FTSY_BUCAI (P57137) Cell division protein ftsY homolog| Length = 378 Score = 85.5 bits (210), Expect = 2e-16 Identities = 52/181 (28%), Positives = 93/181 (51%), Gaps = 6/181 (3%) Frame = -3 Query: 752 SVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVD 573 S+M+AA DTFR+ +EQL+T + IP+ + DPA V +A++ A K DV+++D Sbjct: 207 SIMLAAADTFRAAGIEQLQTLGKLNNIPVIAQRSGSDPAAVIFDAVKSAKSKKIDVLIID 266 Query: 572 TAGRMQDNEPLMRALSKL------INLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLS 411 TAGR+ + L+ L K+ I+++ P L + ++ G + + Q F++ L Sbjct: 267 TAGRLHNKLHLIEELKKIVRVIKKIDISAPHEKLLIIDSCNGQNTIQQTEIFHKALN--- 323 Query: 410 TVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKT 231 + GI++TK D K G S+ P+ ++G G+ DL N + +++ Sbjct: 324 -------LTGIIITKLDG-TAKGGVVFSLADQFQIPIRYIGIGEKMQDLGHFNSQEFIES 375 Query: 230 L 228 + Sbjct: 376 I 376
>SRP54_ASPNG (Q00179) Signal recognition particle 54 kDa protein homolog| Length = 534 Score = 85.5 bits (210), Expect = 2e-16 Identities = 49/173 (28%), Positives = 94/173 (54%) Frame = -3 Query: 743 MAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDTAG 564 + DTFR+GA +QL+ +A + +IP + + DPA+VA E + + + + ++++VDT+G Sbjct: 135 LVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAIVAAEGVAKFKKERFEIIIVDTSG 194 Query: 563 RMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLID 384 R + E L ++++ PD + V ++ +G A Q + F + AD Sbjct: 195 RHKQEEELFTEMTQIQTAVTPDQTILVLDSTIGQAAEAQSSAF-KATADFG--------- 244 Query: 383 GILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 225 I++TK D G A+S V + +P++++G G+ DL++ K+ ++ LL Sbjct: 245 AIIITKTDG-HAAGGGAISAVAATHTPIIYLGTGEHLMDLERFEPKAFIQKLL 296
>SRP54_PYRAB (Q9V1E8) Signal recognition 54 kDa protein (SRP54)| Length = 443 Score = 85.5 bits (210), Expect = 2e-16 Identities = 57/175 (32%), Positives = 87/175 (49%) Frame = -3 Query: 749 VMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDT 570 V + DT+R GA QL+ I +F EKD +AKE ++ D+++VDT Sbjct: 131 VGVVCSDTWRPGAYHQLKQLLDPYHIEVFGDPNEKDAIKLAKEGVEHFKAKGVDLIIVDT 190 Query: 569 AGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTARL 390 AGR ++ + L+ + + N KP V+ V + +G A +NQ LA P Sbjct: 191 AGRHKEEKDLIEEMRMISNEIKPHEVILVIDGTIGQQA------YNQALAFKEATP---- 240 Query: 389 IDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 225 I I++TK D+ K G ALS V +G+P+ F+G G+ DL+ + V LL Sbjct: 241 IGSIIVTKLDS-SAKGGGALSAVAATGAPIKFIGTGEKIDDLEPFDPARFVSRLL 294
>SRP54_CANAL (O42816) Signal recognition particle 54 kDa protein homolog| Length = 556 Score = 84.7 bits (208), Expect = 3e-16 Identities = 51/180 (28%), Positives = 88/180 (48%) Frame = -3 Query: 764 QHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDV 585 + V + DTFR+GA +QL+ +A + IP + E DP +A E +Q+ + K D+ Sbjct: 144 KRGFKVGLVCADTFRAGAFDQLKQNAIKANIPYYGSYLEPDPVKIAFEGVQKFKQEKFDI 203 Query: 584 VLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTV 405 ++VDT+GR + E L + ++ +P + V + +G A Q F + Sbjct: 204 IIVDTSGRHRQEEQLFTEMVQIGEAVQPTQTIMVMDGSIGQAAESQARAFKE-------- 255 Query: 404 PTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 225 + I+LTK D K G A+S V + +P++F+G G+ DL+ + + LL Sbjct: 256 --SSNFGSIILTKMDG-HAKGGGAISAVAATKTPIVFIGTGEHVGDLEIFKPTTFISKLL 312
>SRP54_AQUAE (O67615) Signal recognition particle protein (Fifty-four homolog)| Length = 454 Score = 84.7 bits (208), Expect = 3e-16 Identities = 49/175 (28%), Positives = 92/175 (52%) Frame = -3 Query: 749 VMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDT 570 V +++ D R A+ QL+ A R+ +P +E +A+ A++ A D +L+DT Sbjct: 126 VAVSSTDLRRPAAMLQLQRLAERVGVPYYEFEEGLGAVEIARRAVKRAKEESVDYLLLDT 185 Query: 569 AGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTARL 390 AGR+ +E LM+ L ++ + P +L+V +A+ G A++ F+++L Sbjct: 186 AGRLHVDEELMKELQEIKEVTNPSEILYVADAMQGQTALETAKTFHERLG---------- 235 Query: 389 IDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 225 + G+++TK D D + G ALS+ + G P+ F+G G+ D++ I + +L Sbjct: 236 LTGVVITKMDG-DARGGLALSVKEVLGVPIKFIGVGEKIEDIEPFYPDRIAQRIL 289
>SRP54_ARCFU (O29633) Signal recognition 54 kDa protein (SRP54)| Length = 433 Score = 84.3 bits (207), Expect = 4e-16 Identities = 55/177 (31%), Positives = 89/177 (50%) Frame = -3 Query: 755 LSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLV 576 + V + A DT+R A EQLR A I + + EKD + K A+++ + D++++ Sbjct: 122 MKVAVVAADTWRPAAYEQLRQLAEEYGITFYGEKGEKDAVKIVKNALEKLKDH--DMIII 179 Query: 575 DTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTA 396 DTAGR + L+ + K+ + +PD L V +A +G A Q F++ + Sbjct: 180 DTAGRHALEDELIDEMIKIAEVARPDYKLLVLDAAIGQLASKQAQAFHEAIG-------- 231 Query: 395 RLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 225 I+GI++TKFD K G ALS G P+ F+G G+ D ++ + V LL Sbjct: 232 --INGIIITKFDG-TAKGGGALSAARQIGIPIAFIGTGEKVEDFERFDPAGFVSRLL 285
>FTSY_SYNY3 (P73930) Cell division protein ftsY homolog| Length = 504 Score = 84.3 bits (207), Expect = 4e-16 Identities = 59/187 (31%), Positives = 93/187 (49%), Gaps = 7/187 (3%) Frame = -3 Query: 764 QHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEK-GYEKDPAVVAKEAIQEATRNKSD 588 Q ++AA DTFR+ AVEQ++ R +P+ G DPA V + I A + Sbjct: 327 QSGYDCVIAAADTFRAAAVEQVKVWGERSGVPVIANPGQNTDPAAVVYDGISAAQSRNVN 386 Query: 587 VVLVDTAGRMQDNEPLMRALSK---LINLNKPDLV---LFVGEALVGNDAVDQLNKFNQK 426 ++LVDTAGR+Q+ + LM L+K +I+ P+ L V +A +G + + Q F + Sbjct: 387 LLLVDTAGRLQNKKNLMDELAKIRRIIDKKAPNATVESLLVLDATLGQNGLRQAEVFAE- 445 Query: 425 LADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVK 246 A + G++LTK D K G AL++ P+ F+G G+ DL+ + Sbjct: 446 ---------AAKLSGVVLTKLDG-SAKGGVALAVAQQLNLPIRFIGAGEGIEDLRPFSSY 495 Query: 245 SIVKTLL 225 V+ LL Sbjct: 496 EFVEALL 502
>SRP54_MYCPN (P75054) Signal recognition particle protein (Fifty-four homolog)| Length = 450 Score = 84.3 bits (207), Expect = 4e-16 Identities = 52/180 (28%), Positives = 90/180 (50%) Frame = -3 Query: 764 QHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDV 585 Q M+ A D +R A++QL T A + + F KG + P KEA++ + Sbjct: 126 QFQQKAMLVALDIYRPAAIDQLATLAEQTESVFFAKGTQA-PDQTTKEAVKTFKESGCQA 184 Query: 584 VLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTV 405 ++ DTAGR+Q N+ LM L + N PD +L V + L G + ++ +F+ +L Sbjct: 185 IICDTAGRLQTNQELMDELVAIKNELHPDEILMVVDGLSGQEIINVAKEFHNRLK----- 239 Query: 404 PTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 225 + G ++TK D+ D + GAALS+ + P+ +G + T L++ + + I +L Sbjct: 240 -----LTGFIITKLDS-DARAGAALSLTSLLEVPIKLMGTSEKLTGLEQFHPERIASRIL 293
>SRP54_MYCLE (O33013) Signal recognition particle protein (Fifty-four homolog)| Length = 521 Score = 83.6 bits (205), Expect = 6e-16 Identities = 56/167 (33%), Positives = 80/167 (47%), Gaps = 7/167 (4%) Frame = -3 Query: 746 MMAACDTFRSGAVEQLRTHARRLQIPIFEK-------GYEKDPAVVAKEAIQEATRNKSD 588 ++ ACD R AV QL+ R +P+F DP VA + EA D Sbjct: 132 LLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPDSGPGDPVAVASAGLVEARAKHFD 191 Query: 587 VVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLST 408 VV+VDTAGR+ ++ LM + PD VLFV +A++G DAV F + Sbjct: 192 VVIVDTAGRLGIDDELMAQAGAIREAINPDEVLFVLDAMIGQDAVTTAAAFGAGVG---- 247 Query: 407 VPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTD 267 G++LTK D D + GAALS+ ++G P++F G+ D Sbjct: 248 ------FTGVVLTKLDG-DARGGAALSVREVTGVPILFATTGEKLDD 287
>SRP54_PYRKO (Q5JJC8) Signal recognition 54 kDa protein (SRP54)| Length = 448 Score = 83.6 bits (205), Expect = 6e-16 Identities = 56/175 (32%), Positives = 87/175 (49%) Frame = -3 Query: 749 VMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDT 570 V + DT+R GA QLR I +F EKD +A+E ++ DV++VD+ Sbjct: 131 VGVVCSDTWRPGAYYQLRQLLDPFGIEVFGDPEEKDAVKLAREGVEHFREKGVDVIIVDS 190 Query: 569 AGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTARL 390 AGR ++ + L+ + ++ KP V+ V + +G A +NQ +A P Sbjct: 191 AGRHKEEKGLIEEMRQISEAIKPHEVILVIDGTIGQQA------YNQAMAFKEATP---- 240 Query: 389 IDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 225 I I++TK D K G ALS V +G+P+ F+G G+ DL+ + K V LL Sbjct: 241 IGSIIVTKLDG-SAKGGGALSAVAATGAPIKFIGTGERIDDLEPFDPKRFVSRLL 294
>SRP54_SULTO (Q971S9) Signal recognition 54 kDa protein (SRP54)| Length = 445 Score = 82.4 bits (202), Expect = 1e-15 Identities = 52/177 (29%), Positives = 90/177 (50%), Gaps = 2/177 (1%) Frame = -3 Query: 749 VMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDT 570 V + A D +R A +QL +++ +P++ + D +AK +++ K D+++VDT Sbjct: 126 VGLVAADVYRPAAYDQLVQIGKQINVPVYGEPNNTDAVGIAKRGVEKFLSEKYDIIIVDT 185 Query: 569 AGRMQDNE--PLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTA 396 AGR E L+ + + + KPD V+ V +A +G A D ++F+Q A Sbjct: 186 AGRHGYGEEVKLLEEMKNMYSEIKPDEVILVIDASIGQKAYDLASRFHQ----------A 235 Query: 395 RLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 225 I I++TK D K G ALS V +G+ + F+G G+ +L+ N + V +L Sbjct: 236 SPIGSIIVTKMDG-TAKGGGALSAVAATGAAIKFIGTGEKLDELEVFNPRRFVSRIL 291
>FTSY_THEAQ (P83749) Cell division protein ftsY| Length = 303 Score = 82.4 bits (202), Expect = 1e-15 Identities = 55/182 (30%), Positives = 90/182 (49%), Gaps = 6/182 (3%) Frame = -3 Query: 749 VMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDT 570 VM A DTFR+ QL +RL IP+ + DPA +A +A+Q D++ VDT Sbjct: 132 VMFCAGDTFRAAGGTQLSEWGKRLSIPVIQGPEGTDPAALAYDAVQAMKARGYDLLFVDT 191 Query: 569 AGRMQDNEPLMRALSKL------INLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLST 408 AGR+ LM L K+ + +P V V +A+ G + ++Q KF++ + Sbjct: 192 AGRLHTKHNLMEELKKVKRAIAKADPEEPKEVWLVLDAVTGQNGLEQAKKFHEAVG---- 247 Query: 407 VPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTL 228 + G+++TK D K G + +V P+ FVG G+ DL+ + ++ V+ L Sbjct: 248 ------LTGVIVTKLDG-TAKGGVLIPIVRTLKVPIKFVGVGEGPDDLQPFDPEAFVEAL 300 Query: 227 LK 222 L+ Sbjct: 301 LE 302
>SRP54_PYRHO (O59307) Signal recognition 54 kDa protein (SRP54)| Length = 443 Score = 82.0 bits (201), Expect = 2e-15 Identities = 55/175 (31%), Positives = 86/175 (49%) Frame = -3 Query: 749 VMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDT 570 V + DT+R GA QL+ I +F EKD +AKE ++ D+++VDT Sbjct: 131 VGVVCSDTWRPGAYHQLKQLLDPYHIEVFGDPNEKDAVKLAKEGVEYFKTRDVDLIIVDT 190 Query: 569 AGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTARL 390 AGR ++ + L+ + + +P V+ V + +G A +NQ LA P Sbjct: 191 AGRHKEEKDLIEEMRMISEEIRPHEVILVIDGTIGQQA------YNQALAFKEATP---- 240 Query: 389 IDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 225 I I++TK D+ K G ALS V +G+P+ F+G G+ DL+ + V LL Sbjct: 241 IGSIIVTKLDS-SAKGGGALSAVAATGAPIKFIGVGEKIDDLEPFDPARFVSRLL 294
>FTSY_MYCPN (P75362) Cell division protein ftsY homolog| Length = 348 Score = 80.9 bits (198), Expect = 4e-15 Identities = 57/187 (30%), Positives = 90/187 (48%), Gaps = 6/187 (3%) Frame = -3 Query: 764 QHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDV 585 + N V+M A DTFR+GAV QL A+R+ I +++ V +Q+ +N+ D Sbjct: 162 KQNKRVLMVAGDTFRAGAVAQLAEWAQRIGCDIVLPNPKEETPAVIFRGVQQGIQNEYDF 221 Query: 584 VLVDTAGRMQDNEPLMRALSKL------INLNKPDLVLFVGEALVGNDAVDQLNKFNQKL 423 VL DT+GR+Q+ LM L K+ ++ KP L V + G + Q FN+ Sbjct: 222 VLCDTSGRLQNKTNLMNELKKIYQIVQKVSSAKPQETLLVLDGTTGQSGLAQAKVFNEFT 281 Query: 422 ADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKS 243 + GI+LTK D+ K G L++ + PV +G G++ DL +++ Sbjct: 282 E----------LTGIILTKMDS-SSKGGIILAIKDLFNLPVKLIGFGETTADLAAFDLEQ 330 Query: 242 IVKTLLK 222 V L K Sbjct: 331 YVLGLTK 337
>SRP54_SULAC (O07853) Signal recognition 54 kDa protein (SRP54)| Length = 444 Score = 80.1 bits (196), Expect = 7e-15 Identities = 50/177 (28%), Positives = 91/177 (51%), Gaps = 2/177 (1%) Frame = -3 Query: 749 VMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDT 570 V + A D +R A EQL +++ IP++ + K+P +A +++ + K ++V++DT Sbjct: 126 VGLVAADIYRPAAYEQLIQIGQQINIPVYGEPGNKNPIEIATNGLEKFLKEKMNIVIIDT 185 Query: 569 AGR--MQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTA 396 AGR + L+ + + + PD V+ V +A +G A D ++F+Q A Sbjct: 186 AGRHGYGEEASLLEEMKSMYDKIHPDEVILVIDASIGQKAYDLASRFHQ----------A 235 Query: 395 RLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 225 I ++++K D K G ALS V +G+ + F+G G+ +L+ N + V LL Sbjct: 236 SPIGSLIVSKMDG-TAKGGGALSAVIATGAQIKFIGTGEKLDELEVFNPRRFVSRLL 291
>FTSY_MYCHO (O32861) Cell division protein ftsY homolog| Length = 351 Score = 79.7 bits (195), Expect = 9e-15 Identities = 62/183 (33%), Positives = 90/183 (49%), Gaps = 7/183 (3%) Frame = -3 Query: 749 VMMAACDTFRSGAVEQLRTHARRLQIPIFEKGY-EKDPAVVAKEAIQEATRNKSDVVLVD 573 V++AA DTFR+ AVEQL A+R+ I E DPA V AI A K D+++VD Sbjct: 176 VLIAAGDTFRAAAVEQLEIWAKRVGADIVTPNENEVDPAAVVYRAIDIAKSKKYDILIVD 235 Query: 572 TAGRMQDNEPLMRALSKLINL------NKPDLVLFVGEALVGNDAVDQLNKFNQKLADLS 411 TAGR+Q+ LM L+K+ + + P L V +A G + V Q F + Sbjct: 236 TAGRLQNKVNLMNELAKINRVLASKIPDAPHESLLVLDATTGQNGVIQARVFKESTP--- 292 Query: 410 TVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKT 231 + GI+LTK D K G L++ G V ++G G+ DL + ++ S + Sbjct: 293 -------LTGIILTKMDG-TSKGGIVLTIKDEIGLFVKYIGLGEKVDDLAEFDLDSYIYG 344 Query: 230 LLK 222 L K Sbjct: 345 LTK 347
>SRP54_PYRAE (Q8ZT95) Signal recognition 54 kDa protein (SRP54)| Length = 433 Score = 79.7 bits (195), Expect = 9e-15 Identities = 55/197 (27%), Positives = 95/197 (48%) Frame = -3 Query: 749 VMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDT 570 V + DT R A +QLR A ++ +P + + KD +AK +Q DV++VDT Sbjct: 130 VGLVETDTIRPAAFDQLRQLAEKIGVPFYGERDGKDAVEIAKRGVQNF--KNMDVIIVDT 187 Query: 569 AGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTARL 390 AGR ++ E L++ + + + PD V+ V +A VG A Q F + L Sbjct: 188 AGRHRNEEALLKEVRAIYDAVSPDEVVLVIDATVGKMAAAQAEAFMKYLP---------- 237 Query: 389 IDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLLK*NGS 210 I +++TK D+ + G AL+ V +G+ V F+G G+ + ++ + + V +L Sbjct: 238 IHSVIITKMDS-TARGGGALAAVAKTGAKVKFIGVGEDVDEFEQFSPRKFVARVLGMGDL 296 Query: 209 STCRAPICAAYQRVSVI 159 T I A ++ V+ Sbjct: 297 DTLLEKIKAVFEEEEVL 313
>SRP54_METAC (Q8THD0) Signal recognition 54 kDa protein (SRP54)| Length = 440 Score = 79.3 bits (194), Expect = 1e-14 Identities = 53/177 (29%), Positives = 84/177 (47%) Frame = -3 Query: 755 LSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLV 576 L + A DTFR GA QL+T A +L + + + D + K ++ K D+ +V Sbjct: 126 LKAGVVAADTFRPGAYHQLKTLAEKLNVGFYGEEGNPDAVEITKNGLKAL--EKYDIRIV 183 Query: 575 DTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTA 396 DTAGR L+ + ++ + KPD V +A +G A Q + FN + Sbjct: 184 DTAGRHALEADLIEEMERIHAVAKPDHKFMVLDAGIGQQASQQAHAFNDSVG-------- 235 Query: 395 RLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 225 I G+++TK D K G ALS V + +P+ F+G G++ D +K + LL Sbjct: 236 --ITGVIITKLDG-TAKGGGALSAVSETKAPIAFIGVGETPEDFEKFEADRFISRLL 289
>SRP54_HALVO (Q977V2) Signal recognition 54 kDa protein (SRP54)| Length = 465 Score = 77.8 bits (190), Expect = 3e-14 Identities = 51/169 (30%), Positives = 89/169 (52%) Frame = -3 Query: 731 DTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDTAGRMQD 552 DTFR GA +Q + R ++ + DP +A+E + EAT + +DV +VDTAGR Sbjct: 134 DTFRPGAYDQAKQMCERAEVDFYGDPDCDDPVQIAREGL-EATED-ADVHIVDTAGRHAL 191 Query: 551 NEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILL 372 + L+ + ++ + +PDL L V +A +G A +Q +F++ + I G+++ Sbjct: 192 EDDLIDEIEEIEGVVQPDLNLLVLDAAIGQGAKEQAQQFDESIG----------IGGVVI 241 Query: 371 TKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 225 TK D K G AL+ V + S + F+G G++ D+++ + LL Sbjct: 242 TKLDG-TAKGGGALTAVNETDSSIAFLGMGETVQDIERFEPNGFISRLL 289
>FTSY_HELPY (O25458) Cell division protein ftsY homolog| Length = 293 Score = 77.0 bits (188), Expect = 6e-14 Identities = 52/186 (27%), Positives = 90/186 (48%), Gaps = 6/186 (3%) Frame = -3 Query: 764 QHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDV 585 QH ++ A DTFR+ AV+QL+ +L I + DP+ +A I+ A D Sbjct: 113 QHK-KALLGAGDTFRAAAVKQLQLWGEKLNIQVISAKEGSDPSSLAYNTIESAIAKNIDE 171 Query: 584 VLVDTAGRMQDNEPLMRALSKL------INLNKPDLVLFVGEALVGNDAVDQLNKFNQKL 423 V +DTAGR+ + L LSK+ + + P + + G+ + Q F++ L Sbjct: 172 VFIDTAGRLHNQTNLKNELSKIARTCSKVLKDAPFYKFLILDGTQGSSGLTQAKIFHETL 231 Query: 422 ADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKS 243 A +DG+++TK D K GA LS++Y P++++G G+ DL + + Sbjct: 232 A----------LDGVIMTKLDG-TSKGGAILSVLYELKLPILYLGMGEKEDDLIAFDEER 280 Query: 242 IVKTLL 225 ++ L+ Sbjct: 281 FIEDLV 286
>FTSY_HELPJ (Q9ZL80) Cell division protein ftsY homolog| Length = 293 Score = 77.0 bits (188), Expect = 6e-14 Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 6/186 (3%) Frame = -3 Query: 764 QHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDV 585 QH ++ A DTFR+ AV+QL+ +L + + DP+ +A I+ A D Sbjct: 113 QHK-KALLGAGDTFRAAAVKQLQLWGEKLNVQVISAKEGSDPSSLAYNTIESAIAKNIDE 171 Query: 584 VLVDTAGRMQDNEPLMRALSKLINL------NKPDLVLFVGEALVGNDAVDQLNKFNQKL 423 V +DTAGR+ + L LSK+ + + P + + G+ + Q F++ L Sbjct: 172 VFIDTAGRLHNQTNLKNELSKIAHTCSKVLKDAPFYKFLILDGTQGSSGLTQAKIFHETL 231 Query: 422 ADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKS 243 A +DG+++TK D K GA LS++Y P++++G G+ DL + + Sbjct: 232 A----------LDGVIMTKLDG-TSKGGAILSVLYELKLPILYLGMGEKEDDLIAFDEER 280 Query: 242 IVKTLL 225 ++ L+ Sbjct: 281 FIEDLV 286
>SRP54_METMA (Q8PXF3) Signal recognition 54 kDa protein (SRP54)| Length = 443 Score = 76.6 bits (187), Expect = 8e-14 Identities = 54/177 (30%), Positives = 83/177 (46%) Frame = -3 Query: 755 LSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLV 576 L + A DTFR GA QL+T + +L + + G E +P V K D+ +V Sbjct: 126 LKAGVVAADTFRPGAYHQLKTLSEKLNVGFY--GEEGNPDAVEITIHGLKALEKYDIKIV 183 Query: 575 DTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTA 396 DTAGR L+ + ++ + KPD V +A +G A Q + FN + Sbjct: 184 DTAGRHALEADLIEEMERIHAVAKPDHKFMVLDAGIGQQASQQAHAFNDSVG-------- 235 Query: 395 RLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 225 I G+++TK D K G ALS V + +P+ F+G G++ D +K + LL Sbjct: 236 --ITGVIITKLDG-TAKGGGALSAVSETKAPIAFIGVGETPEDFEKFEADRFISRLL 289
>SRP54_HALSA (Q9HMN5) Signal recognition 54 kDa protein (SRP54)| Length = 460 Score = 76.6 bits (187), Expect = 8e-14 Identities = 50/169 (29%), Positives = 85/169 (50%) Frame = -3 Query: 731 DTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDTAGRMQD 552 DTFR GA EQ A R ++ + + DP +A++ + A +DV +VDTAGR Sbjct: 134 DTFRPGAYEQAAEMADRAEVDFYGEPDSDDPVQIARDGL--AATADADVHIVDTAGRHAL 191 Query: 551 NEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILL 372 + L+ + ++ + +PD L V +A +G A Q +F+ + IDG+ + Sbjct: 192 EDDLIAEIEEIEGVVEPDRSLLVLDAAIGQGAKQQARQFDASIG----------IDGVAI 241 Query: 371 TKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 225 TK D K G +L+ V + S + F+G G++ D+++ S + LL Sbjct: 242 TKLDG-TAKGGGSLTAVNETDSTIAFLGSGETVQDIERFEPDSFISRLL 289
>FTSY_NEIMC (O30391) Cell division protein ftsY homolog| Length = 421 Score = 76.3 bits (186), Expect = 1e-13 Identities = 54/182 (29%), Positives = 90/182 (49%), Gaps = 6/182 (3%) Frame = -3 Query: 752 SVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVD 573 SV++AA DTFR+ A EQL+ R + + + D A V +A+Q A D+VL D Sbjct: 251 SVLLAAGDTFRAAAREQLQAWGERNNVTVISQT-TGDSAAVCFDAVQAAKARGIDIVLAD 309 Query: 572 TAGRMQDNEPLMRALSKLINL------NKPDLVLFVGEALVGNDAVDQLNKFNQKLADLS 411 TAGR+ LM + K+ + + P ++ V +A +G +AV+Q+ F+ L Sbjct: 310 TAGRLPTQLHLMEEIKKVKRVLQKAMPDAPHEIIVVLDANIGQNAVNQVKAFDDALG--- 366 Query: 410 TVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKT 231 + G+++TK D K G ++ PV ++G G+ DL+ + ++ V Sbjct: 367 -------LTGLIVTKLDG-TAKGGILAALASDRPVPVRYIGVGEGIDDLRPFDARAFVDA 418 Query: 230 LL 225 LL Sbjct: 419 LL 420
>FTSY_NEIMB (P57011) Cell division protein ftsY homolog| Length = 421 Score = 76.3 bits (186), Expect = 1e-13 Identities = 54/182 (29%), Positives = 90/182 (49%), Gaps = 6/182 (3%) Frame = -3 Query: 752 SVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVD 573 SV++AA DTFR+ A EQL+ R + + + D A V +A+Q A D+VL D Sbjct: 251 SVLLAAGDTFRAAAREQLQAWGERNNVTVISQT-TGDSAAVCFDAVQAAKARGIDIVLAD 309 Query: 572 TAGRMQDNEPLMRALSKLINL------NKPDLVLFVGEALVGNDAVDQLNKFNQKLADLS 411 TAGR+ LM + K+ + + P ++ V +A +G +AV+Q+ F+ L Sbjct: 310 TAGRLPTQLHLMEEIKKVKRVLQKAMPDAPHEIIVVLDANIGQNAVNQVKAFDDALG--- 366 Query: 410 TVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKT 231 + G+++TK D K G ++ PV ++G G+ DL+ + ++ V Sbjct: 367 -------LTGLIVTKLDG-TAKGGILAALASDRPVPVRYIGVGEGIDDLRPFDARAFVDA 418 Query: 230 LL 225 LL Sbjct: 419 LL 420
>FTSY_NEIMA (P57010) Cell division protein ftsY homolog| Length = 421 Score = 76.3 bits (186), Expect = 1e-13 Identities = 54/182 (29%), Positives = 90/182 (49%), Gaps = 6/182 (3%) Frame = -3 Query: 752 SVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVD 573 SV++AA DTFR+ A EQL+ R + + + D A V +A+Q A D+VL D Sbjct: 251 SVLLAAGDTFRAAAREQLQAWGERNNVTVISQT-TGDSAAVCFDAVQAAKARGIDIVLAD 309 Query: 572 TAGRMQDNEPLMRALSKLINL------NKPDLVLFVGEALVGNDAVDQLNKFNQKLADLS 411 TAGR+ LM + K+ + + P ++ V +A +G +AV+Q+ F+ L Sbjct: 310 TAGRLPTQLHLMEEIKKVKRVLQKAMPDAPHEIIVVLDANIGQNAVNQVKAFDDALG--- 366 Query: 410 TVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKT 231 + G+++TK D K G ++ PV ++G G+ DL+ + ++ V Sbjct: 367 -------LTGLIVTKLDG-TAKGGILAALASDRPVPVRYIGVGEGIDDLRPFDARAFVDA 418 Query: 230 LL 225 LL Sbjct: 419 LL 420
>FTSY_BUCBP (Q89B28) Cell division protein ftsY homolog| Length = 397 Score = 75.9 bits (185), Expect = 1e-13 Identities = 50/185 (27%), Positives = 91/185 (49%), Gaps = 6/185 (3%) Frame = -3 Query: 752 SVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVD 573 SV++AA DTFR+ A++QL+ + + + DPA V +AI+ A D++++D Sbjct: 221 SVILAAGDTFRAAAIDQLKLWGEINSVSVITREIGSDPASVVYDAIKIAKLKCIDILIID 280 Query: 572 TAGRMQDNEPLMRALSKL------INLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLS 411 TAGR+ + LM L K+ I+ + V +A +G +++ Q+ F++ L Sbjct: 281 TAGRLHNKNNLMEELKKIKRVIHKIDSTISQETMLVLDACIGQNSIKQVKIFHESLN--- 337 Query: 410 TVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKT 231 + G+++TK D+ K G S+ PV ++ G+ + D++ N V Sbjct: 338 -------VTGLVITKLDS-TAKGGVIFSIAQEFLIPVRYISFGEDFEDIQVFNSNIFVNA 389 Query: 230 LLK*N 216 +L N Sbjct: 390 ILSNN 394
>SRP54_MYCGE (P47294) Signal recognition particle protein (Fifty-four homolog)| Length = 446 Score = 75.1 bits (183), Expect = 2e-13 Identities = 47/180 (26%), Positives = 87/180 (48%) Frame = -3 Query: 764 QHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDV 585 ++ M+ D +R A+EQL T +++ F +G + A K A+ K Sbjct: 126 KYKQKTMLVGLDIYRPAAIEQLETLSQQTNSVFFAQGTQP-VAKTTKAALSAFKTAKCQT 184 Query: 584 VLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTV 405 ++ DTAGR+Q NE LM L + N PD ++ V + L G + ++ F+++L Sbjct: 185 IICDTAGRLQTNETLMDELVSVKNELNPDEIIMVVDGLSGQEIINVAQTFHKRLK----- 239 Query: 404 PTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 225 + G +++K D+ D + GAALS+ + P+ +G + L++ + + I +L Sbjct: 240 -----LTGFIISKLDS-DARAGAALSLASLLQVPIKLIGVSEKLDGLEQFHPERIANRIL 293
>FTSY_MYCGE (P47539) Cell division protein ftsY homolog| Length = 346 Score = 74.7 bits (182), Expect = 3e-13 Identities = 58/187 (31%), Positives = 92/187 (49%), Gaps = 7/187 (3%) Frame = -3 Query: 764 QHNLSVMMAACDTFRSGAVEQLRTHARRLQIPI-FEKGYEKDPAVVAKEAIQEATRNKSD 588 + N V++ A DTFR+GA+EQL A+ L I E+ PAV+ + +++ +K D Sbjct: 162 KQNKRVLLVAGDTFRAGAIEQLNQWAKLLNCDIVLPNPKEQTPAVIFR-GVKKGIDDKYD 220 Query: 587 VVLVDTAGRMQDNEPLMRALSKLINL------NKPDLVLFVGEALVGNDAVDQLNKFNQK 426 VL DT+GR+Q+ LM L K+ + ++P L V + VG + Q FN+ Sbjct: 221 FVLCDTSGRLQNKLNLMNELQKIYQIIQKVSGSEPSETLLVLDGTVGQTGLSQAKVFNE- 279 Query: 425 LADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVK 246 + GI+LTK D K G L++ + PV +G G+ +DL +++ Sbjct: 280 ---------FSKLTGIVLTKMDG-SAKGGIILAIKDMFNLPVKLIGFGEKTSDLAIFDLE 329 Query: 245 SIVKTLL 225 V LL Sbjct: 330 KYVLGLL 336
>FTSY_MYCTU (P66842) Cell division protein ftsY homolog| Length = 422 Score = 74.3 bits (181), Expect = 4e-13 Identities = 59/179 (32%), Positives = 85/179 (47%), Gaps = 4/179 (2%) Frame = -3 Query: 749 VMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDT 570 V++ A DTFR+ A +QL+T A R+ + DPA VA +A+ + +DVVL+DT Sbjct: 254 VVLGAADTFRAAAADQLQTWAARVGAAVVRGPEGADPASVAFDAVDKGIAAGADVVLIDT 313 Query: 569 AGRMQDNEPLMRALSKLINL----NKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVP 402 AGR+ LM L K+ + D VL V +A +G + + Q F ++ D+S Sbjct: 314 AGRLHTKVGLMDELDKVKRVVTRRASVDEVLLVLDATIGQNGLAQARVF-AEVVDIS--- 369 Query: 401 TARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 225 G +LTK D K G + G PV VG G+ DL + V LL Sbjct: 370 ------GAVLTKLDG-TAKGGIVFRVQQELGVPVKLVGLGEGPDDLAPFEPAAFVDALL 421
>FTSY_MYCBO (P66843) Cell division protein ftsY homolog| Length = 422 Score = 74.3 bits (181), Expect = 4e-13 Identities = 59/179 (32%), Positives = 85/179 (47%), Gaps = 4/179 (2%) Frame = -3 Query: 749 VMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDT 570 V++ A DTFR+ A +QL+T A R+ + DPA VA +A+ + +DVVL+DT Sbjct: 254 VVLGAADTFRAAAADQLQTWAARVGAAVVRGPEGADPASVAFDAVDKGIAAGADVVLIDT 313 Query: 569 AGRMQDNEPLMRALSKLINL----NKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVP 402 AGR+ LM L K+ + D VL V +A +G + + Q F ++ D+S Sbjct: 314 AGRLHTKVGLMDELDKVKRVVTRRASVDEVLLVLDATIGQNGLAQARVF-AEVVDIS--- 369 Query: 401 TARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 225 G +LTK D K G + G PV VG G+ DL + V LL Sbjct: 370 ------GAVLTKLDG-TAKGGIVFRVQQELGVPVKLVGLGEGPDDLAPFEPAAFVDALL 421
>SRP54_METTH (O27376) Signal recognition 54 kDa protein (SRP54)| Length = 442 Score = 73.6 bits (179), Expect = 6e-13 Identities = 50/176 (28%), Positives = 88/176 (50%) Frame = -3 Query: 752 SVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVD 573 +V + DT+R A+EQL+ + + I+ +D +A++ + A K DV++ D Sbjct: 129 TVGVVCTDTWRPAALEQLKQYTEGQDVSIYGDPQNRDALDLAEKGL--ARFQKKDVIIFD 186 Query: 572 TAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTAR 393 TAGR ++ + L+R + +L + +P + V + +G A +Q F + A Sbjct: 187 TAGRHKEEKDLLREMEELSAIVEPHEAILVIDGTIGQQAREQALAFRK----------AT 236 Query: 392 LIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 225 I I++TK D K G ALS V G+P+ F+G G+ DL+ + + + LL Sbjct: 237 DIGSIIVTKLDG-SAKGGGALSAVAEIGAPIKFIGTGERIDDLEVFDPERFISRLL 291
>FTSY_NEIGO (P14929) Cell division protein ftsY homolog| Length = 416 Score = 72.8 bits (177), Expect = 1e-12 Identities = 54/182 (29%), Positives = 91/182 (50%), Gaps = 6/182 (3%) Frame = -3 Query: 752 SVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVD 573 SV++AA DTFR+ A EQL+ R + + + D A V +A+Q A + + D+VL D Sbjct: 247 SVLLAAGDTFRAAAREQLQAWGGRNNVTVISQT-TGDSAAVCFDAVQ-AAKARIDIVLAD 304 Query: 572 TAGRMQDNEPLMRALSKLINL------NKPDLVLFVGEALVGNDAVDQLNKFNQKLADLS 411 TAGR+ LM + K+ + P ++ V +A +G +AV+Q+ F+ L Sbjct: 305 TAGRLPTQLHLMEEIKKVKRVLQKAIPGAPHEIIVVLDANIGQNAVNQVKAFDDALG--- 361 Query: 410 TVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKT 231 + G+++TK D K G ++ PV ++G G+ DL+ + ++ V Sbjct: 362 -------LTGLIVTKLDG-TAKGGILAALASDRPVPVRYIGVGEGIDDLRPFDARAFVDR 413 Query: 230 LL 225 LL Sbjct: 414 LL 415
>FTSY_MYCLE (O33010) Cell division protein ftsY homolog| Length = 430 Score = 71.2 bits (173), Expect = 3e-12 Identities = 57/180 (31%), Positives = 84/180 (46%), Gaps = 4/180 (2%) Frame = -3 Query: 749 VMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDT 570 V++ A DTFR+ A +QL+T A R+ + DPA VA +A+ + +DVV++DT Sbjct: 262 VVLGAADTFRAAAADQLQTWASRVGAELVRGVEGADPASVAFDAVDKGIGAGADVVVIDT 321 Query: 569 AGRMQDNEPLMRALSKLINL----NKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVP 402 AGR+ LM L K+ + D VL V +A +G + + Q+ F + + Sbjct: 322 AGRLHTKVGLMDELDKIKRVVTRRAAVDEVLLVLDATIGQNGLTQVRVFAEVVD------ 375 Query: 401 TARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLLK 222 I G +LTK D K G + G PV VG G+ DL V LL+ Sbjct: 376 ----ITGAVLTKLDG-TAKGGIVFRIQRELGVPVKLVGLGEGPDDLAPFEPAVFVDALLE 430
>SRP54_THEVO (Q979Y8) Signal recognition 54 kDa protein (SRP54)| Length = 455 Score = 68.6 bits (166), Expect = 2e-11 Identities = 50/177 (28%), Positives = 80/177 (45%) Frame = -3 Query: 755 LSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLV 576 LS + A D R A EQL+ A + + EKDP + K ++ + V ++ Sbjct: 126 LSAGLIAADVHRYAAYEQLQQIAESVNAKFYGDPKEKDPVKIIKNGLE--VLKDAQVKII 183 Query: 575 DTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTA 396 DT+GR + L+ + ++ KPD VL V +A +G A + N + Sbjct: 184 DTSGRDSLDSDLIEEIRRIKEAVKPDQVLMVIDATMGQQAGPESKAINDAVG-------- 235 Query: 395 RLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 225 + GI++TK D K G ALS V P+ F+G G+ D++ + K + LL Sbjct: 236 --VTGIIITKMDG-TAKGGGALSAVAKMRVPIYFIGTGEHMDDMEIFDPKKFLSRLL 289
>SRP54_AERPE (Q9YB62) Signal recognition 54 kDa protein (SRP54)| Length = 441 Score = 65.9 bits (159), Expect = 1e-10 Identities = 48/177 (27%), Positives = 87/177 (49%), Gaps = 2/177 (1%) Frame = -3 Query: 749 VMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDT 570 V + + DT R GA EQL+ A +F E DPA +A+ +++ +++V+VDT Sbjct: 127 VGLVSSDTHRPGAYEQLKRLAEEAGA-MFYGEREGDPAEIARRGLEDLLSRGAEIVIVDT 185 Query: 569 AGRMQDNEP--LMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTA 396 AGR E L+ + + + +PD V V +A +G A+ +F++ Sbjct: 186 AGRHGHGEEARLLDEMKAIASKVRPDEVALVIDASIGQKAMGLAERFHKSTP-------- 237 Query: 395 RLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 225 I I++TK D + G AL+ ++G+ + F+G G++ +L+ + V +L Sbjct: 238 --IGSIIVTKMDG-TARGGGALTAAAVTGARIKFIGTGETLGELEPFAPRRFVARIL 291
>SRP54_THEAC (Q9HKT0) Signal recognition 54 kDa protein (SRP54)| Length = 456 Score = 63.5 bits (153), Expect = 7e-10 Identities = 47/173 (27%), Positives = 77/173 (44%) Frame = -3 Query: 743 MAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDTAG 564 + A D R A +QL+ A + + EKDP + K +++ V ++DT+G Sbjct: 130 LIAADVHRYAAYDQLKQIASEVNAKFYGDQSEKDPVRLIKHGLEQL--KDVAVKIIDTSG 187 Query: 563 RMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLID 384 R + L + ++ PD VL + +A +G A + FN + + Sbjct: 188 RDSMDAELFDEIRRIKEAVAPDEVLMIIDATMGQQAGPEAKAFNDAIG----------VT 237 Query: 383 GILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 225 GI++TK D K G ALS V P+ F+G G+ DL+ + K + LL Sbjct: 238 GIIITKMDG-TAKGGGALSAVAEIHVPIYFIGTGEHMDDLEVFDPKKFLSRLL 289
>FLHF_CAMJE (O52908) Flagellar biosynthesis protein flhF (Flagella-associated| GTP-binding protein) Length = 484 Score = 57.4 bits (137), Expect = 5e-08 Identities = 54/173 (31%), Positives = 86/173 (49%), Gaps = 3/173 (1%) Frame = -3 Query: 731 DTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDTAGRMQ- 555 DT+R GAVEQL +A+ +++PI + KD EAI+ + N +V+LVDT G Q Sbjct: 321 DTYRIGAVEQLFQYAKMMKLPIIDSIEPKD----LDEAIK--SLNNCEVILVDTIGNSQY 374 Query: 554 DNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGIL 375 D L + L++ N A + + V N ++ L ++ + ID ++ Sbjct: 375 DQSKLAKTKEFLMHSN----------AEIDVNLVVSANTKHEDLMEIYKNFSFLNIDTLI 424 Query: 374 LTKFDTIDDKV-GAALSMVYISGSPVMFVGCGQSY-TDLKKLNVKSIVKTLLK 222 +TKFD + KV G S+VY + P+ F GQ DL+ N +V +L+ Sbjct: 425 ITKFD--ETKVFGNIFSLVYETNIPLSFFSIGQEVPDDLEVANSDFLVHCILE 475
>FLHF_AQUAE (O67266) Flagellar biosynthesis protein flhF (Flagella-associated| GTP-binding protein) Length = 373 Score = 42.7 bits (99), Expect = 0.001 Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 4/180 (2%) Frame = -3 Query: 749 VMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDT 570 V + + D FR GA EQL+ A L++P K + A IQ + DV+LVDT Sbjct: 203 VGIISLDCFRVGAFEQLKAFAEVLEVPF--KLADSPRAF----NIQLLEMDDRDVILVDT 256 Query: 569 AGRMQDNEPLMRALSKLINLNKPDLVLFVG---EALVGNDAVDQLNKFNQKLADLSTVPT 399 AGR + ++ L ++ + L + LV +A+ Q F+ Sbjct: 257 AGRSHYDVIRLKELETYFKVSDISVYLTLAANLSELVMYEAIMQFGMFS----------- 305 Query: 398 ARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSY-TDLKKLNVKSIVKTLLK 222 I G++ TK D G+ +++ Y + PV+ GQS D+ N +V+ +L+ Sbjct: 306 ---ISGLIFTKLDE-TPYPGSMVNVAYRTQYPVVCFTMGQSIPEDIVVANYDYLVRLILE 361
>FLHF_BACSU (Q01960) Flagellar biosynthesis protein flhF (Flagella-associated| GTP-binding protein) Length = 366 Score = 42.4 bits (98), Expect = 0.002 Identities = 28/57 (49%), Positives = 33/57 (57%) Frame = -3 Query: 731 DTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDTAGR 561 DT+R AVEQL+T+A LQ P+ E Y K+ AKE E D V VDTAGR Sbjct: 213 DTYRIAAVEQLKTYAELLQAPL-EVCYTKEEFQQAKELFSE-----YDHVFVDTAGR 263
>FLHF_PSEPU (O52256) Flagellar biosynthesis protein flhF (Flagella-associated| GTP-binding protein) Length = 437 Score = 40.4 bits (93), Expect = 0.006 Identities = 26/73 (35%), Positives = 42/73 (57%) Frame = -3 Query: 752 SVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVD 573 ++ + + D+FR GA EQL+T R L +P+ DP A++ R + VVL+D Sbjct: 250 NLALVSMDSFRIGAQEQLKTLGRILNVPV----TYVDPGQSLAAALEPLLRKR--VVLID 303 Query: 572 TAGRMQDNEPLMR 534 TAG +Q ++P +R Sbjct: 304 TAG-LQASDPALR 315
>FLHF_BORBU (Q44758) Flagellar biosynthesis protein flhF (Flagella-associated| GTP-binding protein) Length = 388 Score = 35.4 bits (80), Expect = 0.20 Identities = 40/166 (24%), Positives = 72/166 (43%), Gaps = 6/166 (3%) Frame = -3 Query: 758 NLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKS-DVV 582 +L++ + D +R GA +Q++T+ + IP+ + E K+ E T +K D++ Sbjct: 206 SLNIKIITIDNYRIGAKKQIQTYGDIMGIPV--RAIES-----FKDLKDEITDSKDFDLI 258 Query: 581 LVDTAGRMQDNEPLMRALSKLINL--NKPDLVLFVGEALVGNDAVD---QLNKFNQKLAD 417 LVDT G+ + + + +L+N + L V +D + Q + FN K Sbjct: 259 LVDTIGKSPKDFMKLAEMKELLNACGRDAEFHLAVSSTTKTSDVKEIFHQFSPFNYKT-- 316 Query: 416 LSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQ 279 ++ TK D VG +S++Y V +V GQ Sbjct: 317 ------------VIFTKVDE-TTCVGNLISLIYEMKKVVSYVTDGQ 349
>DEGP7_ARATH (Q8RY22) Protease Do-like 7 (EC 3.4.21.-)| Length = 1097 Score = 32.0 bits (71), Expect = 2.2 Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 2/31 (6%) Frame = +3 Query: 675 LKPASMSPQLLNS--TRSEGITCCHHDTEVM 761 ++PAS+SP + N+ S+ I+ CHHDTE M Sbjct: 499 IEPASVSPSIGNNGFPISQDISLCHHDTEPM 529
>PANC_PSEAE (Q9HV69) Pantoate--beta-alanine ligase (EC 6.3.2.1) (Pantothenate| synthetase) (Pantoate-activating enzyme) Length = 283 Score = 32.0 bits (71), Expect = 2.2 Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 7/91 (7%) Frame = -3 Query: 569 AGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLST------ 408 A R E + +SKL+N+ +PDL LF G QL + + DL+ Sbjct: 121 ASRPGHFEGVATVVSKLLNMVQPDLALF------GEKDFQQLAVIRKLVRDLNLPVQIFG 174 Query: 407 VPTARLIDGILL-TKFDTIDDKVGAALSMVY 318 PT R DG+ L ++ +D++ AA +Y Sbjct: 175 EPTVRAADGLALSSRNGYLDEQQRAAAPAIY 205
>RMS1_YEAST (Q12504) Putative transcription regulator RMS1| Length = 494 Score = 31.6 bits (70), Expect = 2.8 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 2/48 (4%) Frame = +3 Query: 339 SNLVIDSVKLGEQDTIDQSSCWNSGKICQFLIELVELIN--CVIPNQC 476 +N I GE+ +D C+N+G++ LI LV+++ C IP C Sbjct: 320 NNANIQEFLEGEEIVLDSYDCYNNGELLPQLILLVQILTILCQIPGLC 367
>MURE_THEMA (Q9WY79) UDP-N-acetylmuramoylalanyl-D-glutamate--2,| 6-diaminopimelate ligase (EC 6.3.2.13) (UDP-N-acetylmuramyl-tripeptide synthetase) (Meso-diaminopimelate-adding enzyme) (UDP-MurNAc-tripeptide synthetase) Length = 490 Score = 30.8 bits (68), Expect = 4.8 Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 5/81 (6%) Frame = -3 Query: 713 AVEQLRTHARRLQ----IPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDTAG-RMQDN 549 A+E+L + R++ I +F G D + + E +DVV++ T R +D Sbjct: 351 ALEKLLKNVRKISQGRVIVVFGAGGNSDRG--KRPMMSEVASKLADVVILTTDDPRGEDP 408 Query: 548 EPLMRALSKLINLNKPDLVLF 486 E +M L K I+ KP LVLF Sbjct: 409 EQIMEDLIKGIDKRKPYLVLF 429
>YL61_SCHPO (Q8TFG9) Hypothetical serine/threonine-rich protein PB15E9.01c| precursor Length = 943 Score = 30.8 bits (68), Expect = 4.8 Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 4/114 (3%) Frame = +1 Query: 322 TMDSAAPTLSSIVSNLVSRIPSISLAVGTVERXXXXXXXXXXXXXXXXPTN----ASPTN 489 ++ S++ T SS+ S S I S SLA ++ TN A+PT+ Sbjct: 118 SLASSSTTSSSLAS---SSITSSSLASSSITSSSLASSSTTSSSLASSSTNSTTSATPTS 174 Query: 490 KTRSGLLRLMSLESALISGSLSCIRPAVSTRTTSDLFRVASWIASFATTAGSFS 651 S L + ++ S SL+ +T T+ ++S AS + T+ S + Sbjct: 175 SATSSSLSSTAASNSATSSSLASSSLNSTTSATATSSSLSSTAASNSATSSSLA 228
>MURI2_BACSU (O05412) Glutamate racemase 2 (EC 5.1.1.3)| Length = 265 Score = 30.0 bits (66), Expect = 8.2 Identities = 24/63 (38%), Positives = 33/63 (52%) Frame = -3 Query: 758 NLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVL 579 N+ ++ AC+T S A+E LR R PI G E PAV K AI + T + V++ Sbjct: 62 NIKALVIACNTATSIAIEDLR---RNFDFPII--GIE--PAV--KPAINKCTEERKRVLV 112 Query: 578 VDT 570 V T Sbjct: 113 VAT 115
>ENGA_PSESM (Q886Y6) GTP-binding protein engA| Length = 489 Score = 30.0 bits (66), Expect = 8.2 Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 2/80 (2%) Frame = -3 Query: 611 EATRNKSDVVLVDTAGRMQDNEPLMRALSK--LINLNKPDLVLFVGEALVGNDAVDQLNK 438 EA +L+DT G D + +++ L+ + + D+VLF+ +A G A DQ+ Sbjct: 44 EAKWQGRSYILIDTGGISGDEHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIG 103 Query: 437 FNQKLADLSTVPTARLIDGI 378 + + + + A ID I Sbjct: 104 EHLRKRNKRSYVVANKIDNI 123 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 111,513,394 Number of Sequences: 219361 Number of extensions: 2336258 Number of successful extensions: 7031 Number of sequences better than 10.0: 106 Number of HSP's better than 10.0 without gapping: 6718 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6933 length of database: 80,573,946 effective HSP length: 110 effective length of database: 56,444,236 effective search space used: 8127969984 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
