ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd27c11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_482982.1| Oryza sativa (japonica cultivar-group), mRNA 511 e-141
2ref|XM_482983.1| Oryza sativa (japonica cultivar-group), mRNA 511 e-141
3dbj|AK101591.1| Oryza sativa (japonica cultivar-group) cDNA clon... 511 e-141
4dbj|AK065513.1| Oryza sativa (japonica cultivar-group) cDNA clon... 511 e-141
5gb|AY103682.1| Zea mays PCO122909 mRNA sequence 511 e-141
6ref|NM_119206.3| Arabidopsis thaliana GTP binding / GTPase/ RNA ... 188 2e-44
7gb|AY133612.1| Arabidopsis thaliana AT4g30600/F17I23_60 mRNA, co... 188 2e-44
8gb|AY065066.1| Arabidopsis thaliana AT4g30600/F17I23_60 mRNA, co... 188 2e-44
9gb|AY372539.1| Cucumis sativus signal recognition particle recep... 167 7e-38
10emb|AL161577.2|ATCHRIV73 Arabidopsis thaliana DNA chromosome 4, ... 135 2e-28
11gb|AF160182.1|F17I23 Arabidopsis thaliana BAC F17I23 135 2e-28
12dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 125 2e-25
13dbj|AP005391.3| Oryza sativa (japonica cultivar-group) genomic D... 125 2e-25
14dbj|AP004643.3| Oryza sativa (japonica cultivar-group) genomic D... 125 2e-25
15gb|AC136953.17| Medicago truncatula clone mth2-20h6, complete se... 94 8e-16
16emb|AJ293426.1|BOL293426 Brassica oleracea partial mRNA for hypo... 86 2e-13
17ref|XM_684658.1| PREDICTED: Danio rerio similar to signal recogn... 60 1e-05
18ref|XM_692426.1| PREDICTED: Danio rerio similar to signal recogn... 60 1e-05
19ref|XM_947200.1| Theileria annulata strain Ankara signal recogni... 58 4e-05
20ref|XM_792097.1| PREDICTED: Strongylocentrotus purpuratus simila... 58 4e-05
21gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome 56 2e-04
22ref|XM_446853.1| Candida glabrata CBS138, CAGL0H01265g partial mRNA 52 0.003
23emb|CR380954.1| Candida glabrata strain CBS138 chromosome H comp... 52 0.003
24emb|AJ851760.1| Gallus gallus mRNA for hypothetical protein, clo... 52 0.003
25ref|NM_001039277.1| Gallus gallus signal recognition particle re... 52 0.003
26ref|XM_643295.1| Entamoeba histolytica HM-1:IMSS Signal recognit... 50 0.011
27ref|XM_647593.1| Entamoeba histolytica HM-1:IMSS Signal recognit... 50 0.011
28gb|AY786549.1| Caenorhabditis remanei signal recognition particl... 46 0.17
29ref|NM_189333.1| Oryza sativa (japonica cultivar-group), predic... 44 0.67
30emb|AJ549215.1|ZMA549215 Zea mays mRNA for chloroplast SRP recep... 44 0.67
31emb|BX571838.9| Zebrafish DNA sequence from clone DKEY-205N7 in ... 44 0.67
32dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.67
33dbj|AP003238.4| Oryza sativa (japonica cultivar-group) genomic D... 44 0.67
34dbj|AP004326.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.67
35dbj|AK109369.2| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.67
36dbj|AK103090.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.67
37dbj|AK058574.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.67
38gb|AE017245.1| Mycoplasma synoviae 53, complete genome 42 2.7
39emb|BX323058.5| Human DNA sequence from clone RP11-12C4 on chrom... 42 2.7
40emb|BX571724.9| Zebrafish DNA sequence from clone CH211-165B19 i... 42 2.7
41emb|BX537141.17| Zebrafish DNA sequence from clone DKEY-9E8 in l... 42 2.7
42ref|XM_628342.1| Cryptosporidium parvum Iowa II SRP54. signal re... 42 2.7
43emb|BX601643.6| Zebrafish DNA sequence from clone DKEY-32B18 in ... 42 2.7
44dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.7
45gb|AC015631.10|AC015631 Homo sapiens, clone RP11-45L5, complete ... 42 2.7
46dbj|AP005178.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.7
47emb|CR762425.5| Zebrafish DNA sequence from clone CH211-181P1 in... 42 2.7
48emb|BX296566.5| Zebrafish DNA sequence from clone CH211-196F4 in... 42 2.7
49emb|AL590449.1|CNS07EGG chromosome X of strain GB-M1 of Encephal... 42 2.7 
>ref|XM_482982.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2130

 Score =  511 bits (258), Expect = e-141
 Identities = 474/546 (86%)
 Strand = Plus / Minus

                                                                        
Query: 221  acttcagtagggtcttcacgatggatttcacattcagcttcttcaggtcagtgtaggact 280
            ||||||| ||||| || ||||||||||| ||||| |||||||| ||||||||||| ||||
Sbjct: 1916 acttcagcagggttttaacgatggatttgacattgagcttcttgaggtcagtgtaagact 1857

                                                                        
Query: 281  gaccgcatccgacgaacatgaccggagatccagatatgtaaaccatggacagtgcggctc 340
            |||| || || ||||||||||| |||| ||||||||| |||||||| || ||||| ||||
Sbjct: 1856 gaccacagccaacgaacatgactggagctccagatatataaaccattgaaagtgcagctc 1797

                                                                        
Query: 341  caaccttgtcatcgatagtgtcaaacttggtgagcaggataccatcgatcagtctagctg 400
            |||||||||| ||||| ||||||||||||||||||||||| ||||| |||| ||| |  |
Sbjct: 1796 caaccttgtcgtcgatggtgtcaaacttggtgagcaggatgccatctatcaatctggtag 1737

                                                                        
Query: 401  ttggaacagtggaaagatctgccaatttctgattgaacttgttgagctgatcaactgcgt 460
            | || |||| |||||| ||||| |||||||| || || ||  |||| |||||||| || |
Sbjct: 1736 tagggacagcggaaaggtctgctaatttctggttaaatttagtgagttgatcaacagcat 1677

                                                                        
Query: 461  cattcccaaccaatgcctctcccacaaataagaccagatctggcttgttgagattgatga 520
            |||| ||||||||||| || || |||||||| || ||||||||  | |||||||||||||
Sbjct: 1676 cattaccaaccaatgcttccccaacaaataaaactagatctgggctattgagattgatga 1617

                                                                        
Query: 521  gcttggagagtgctctcatcagtggctcattatcctgcatacgaccagccgtatcaacaa 580
            ||||||||||||||||||| ||||||||||||||||||||||| ||||| || || ||||
Sbjct: 1616 gcttggagagtgctctcatgagtggctcattatcctgcatacgtccagcagtgtcgacaa 1557

                                                                        
Query: 581  gaacaacatctgatttgtttcgggtggcttcctggatagcttcttttgccacaactgctg 640
            ||||||||||||| || || || || |||||||| ||||| || ||||| ||||| ||||
Sbjct: 1556 gaacaacatctgacttattacgagtagcttcctgaatagcctcctttgcgacaaccgctg 1497

                                                                        
Query: 641  ggtccttctcatatcccttctcaaatataggtatctgaagcctgcgagcatgagtccgca 700
            | || || ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1496 gatctttttcatatcccttctcaaatataggtatctgaagcctgcgagcatgagtacgca 1437

                                                                        
Query: 701  gctgctcaacagcaccagatctgaaggtatcacatgctgccatcatgacactgaggttat 760
            | |||||||||||||||||||| ||||| |||||||||||||   | |||||||||||||
Sbjct: 1436 gttgctcaacagcaccagatctaaaggtgtcacatgctgccaggcttacactgaggttat 1377

                  
Query: 761  gctgaa 766
            ||||||
Sbjct: 1376 gctgaa 1371
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>ref|XM_482983.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2332

 Score =  511 bits (258), Expect = e-141
 Identities = 474/546 (86%)
 Strand = Plus / Minus

                                                                        
Query: 221  acttcagtagggtcttcacgatggatttcacattcagcttcttcaggtcagtgtaggact 280
            ||||||| ||||| || ||||||||||| ||||| |||||||| ||||||||||| ||||
Sbjct: 2026 acttcagcagggttttaacgatggatttgacattgagcttcttgaggtcagtgtaagact 1967

                                                                        
Query: 281  gaccgcatccgacgaacatgaccggagatccagatatgtaaaccatggacagtgcggctc 340
            |||| || || ||||||||||| |||| ||||||||| |||||||| || ||||| ||||
Sbjct: 1966 gaccacagccaacgaacatgactggagctccagatatataaaccattgaaagtgcagctc 1907

                                                                        
Query: 341  caaccttgtcatcgatagtgtcaaacttggtgagcaggataccatcgatcagtctagctg 400
            |||||||||| ||||| ||||||||||||||||||||||| ||||| |||| ||| |  |
Sbjct: 1906 caaccttgtcgtcgatggtgtcaaacttggtgagcaggatgccatctatcaatctggtag 1847

                                                                        
Query: 401  ttggaacagtggaaagatctgccaatttctgattgaacttgttgagctgatcaactgcgt 460
            | || |||| |||||| ||||| |||||||| || || ||  |||| |||||||| || |
Sbjct: 1846 tagggacagcggaaaggtctgctaatttctggttaaatttagtgagttgatcaacagcat 1787

                                                                        
Query: 461  cattcccaaccaatgcctctcccacaaataagaccagatctggcttgttgagattgatga 520
            |||| ||||||||||| || || |||||||| || ||||||||  | |||||||||||||
Sbjct: 1786 cattaccaaccaatgcttccccaacaaataaaactagatctgggctattgagattgatga 1727

                                                                        
Query: 521  gcttggagagtgctctcatcagtggctcattatcctgcatacgaccagccgtatcaacaa 580
            ||||||||||||||||||| ||||||||||||||||||||||| ||||| || || ||||
Sbjct: 1726 gcttggagagtgctctcatgagtggctcattatcctgcatacgtccagcagtgtcgacaa 1667

                                                                        
Query: 581  gaacaacatctgatttgtttcgggtggcttcctggatagcttcttttgccacaactgctg 640
            ||||||||||||| || || || || |||||||| ||||| || ||||| ||||| ||||
Sbjct: 1666 gaacaacatctgacttattacgagtagcttcctgaatagcctcctttgcgacaaccgctg 1607

                                                                        
Query: 641  ggtccttctcatatcccttctcaaatataggtatctgaagcctgcgagcatgagtccgca 700
            | || || ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1606 gatctttttcatatcccttctcaaatataggtatctgaagcctgcgagcatgagtacgca 1547

                                                                        
Query: 701  gctgctcaacagcaccagatctgaaggtatcacatgctgccatcatgacactgaggttat 760
            | |||||||||||||||||||| ||||| |||||||||||||   | |||||||||||||
Sbjct: 1546 gttgctcaacagcaccagatctaaaggtgtcacatgctgccaggcttacactgaggttat 1487

                  
Query: 761  gctgaa 766
            ||||||
Sbjct: 1486 gctgaa 1481
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>dbj|AK101591.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051D02, full
            insert sequence
          Length = 2331

 Score =  511 bits (258), Expect = e-141
 Identities = 474/546 (86%)
 Strand = Plus / Minus

                                                                        
Query: 221  acttcagtagggtcttcacgatggatttcacattcagcttcttcaggtcagtgtaggact 280
            ||||||| ||||| || ||||||||||| ||||| |||||||| ||||||||||| ||||
Sbjct: 2025 acttcagcagggttttaacgatggatttgacattgagcttcttgaggtcagtgtaagact 1966

                                                                        
Query: 281  gaccgcatccgacgaacatgaccggagatccagatatgtaaaccatggacagtgcggctc 340
            |||| || || ||||||||||| |||| ||||||||| |||||||| || ||||| ||||
Sbjct: 1965 gaccacagccaacgaacatgactggagctccagatatataaaccattgaaagtgcagctc 1906

                                                                        
Query: 341  caaccttgtcatcgatagtgtcaaacttggtgagcaggataccatcgatcagtctagctg 400
            |||||||||| ||||| ||||||||||||||||||||||| ||||| |||| ||| |  |
Sbjct: 1905 caaccttgtcgtcgatggtgtcaaacttggtgagcaggatgccatctatcaatctggtag 1846

                                                                        
Query: 401  ttggaacagtggaaagatctgccaatttctgattgaacttgttgagctgatcaactgcgt 460
            | || |||| |||||| ||||| |||||||| || || ||  |||| |||||||| || |
Sbjct: 1845 tagggacagcggaaaggtctgctaatttctggttaaatttagtgagttgatcaacagcat 1786

                                                                        
Query: 461  cattcccaaccaatgcctctcccacaaataagaccagatctggcttgttgagattgatga 520
            |||| ||||||||||| || || |||||||| || ||||||||  | |||||||||||||
Sbjct: 1785 cattaccaaccaatgcttccccaacaaataaaactagatctgggctattgagattgatga 1726

                                                                        
Query: 521  gcttggagagtgctctcatcagtggctcattatcctgcatacgaccagccgtatcaacaa 580
            ||||||||||||||||||| ||||||||||||||||||||||| ||||| || || ||||
Sbjct: 1725 gcttggagagtgctctcatgagtggctcattatcctgcatacgtccagcagtgtcgacaa 1666

                                                                        
Query: 581  gaacaacatctgatttgtttcgggtggcttcctggatagcttcttttgccacaactgctg 640
            ||||||||||||| || || || || |||||||| ||||| || ||||| ||||| ||||
Sbjct: 1665 gaacaacatctgacttattacgagtagcttcctgaatagcctcctttgcgacaaccgctg 1606

                                                                        
Query: 641  ggtccttctcatatcccttctcaaatataggtatctgaagcctgcgagcatgagtccgca 700
            | || || ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1605 gatctttttcatatcccttctcaaatataggtatctgaagcctgcgagcatgagtacgca 1546

                                                                        
Query: 701  gctgctcaacagcaccagatctgaaggtatcacatgctgccatcatgacactgaggttat 760
            | |||||||||||||||||||| ||||| |||||||||||||   | |||||||||||||
Sbjct: 1545 gttgctcaacagcaccagatctaaaggtgtcacatgctgccaggcttacactgaggttat 1486

                  
Query: 761  gctgaa 766
            ||||||
Sbjct: 1485 gctgaa 1480
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>dbj|AK065513.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013033N04, full
            insert sequence
          Length = 2130

 Score =  511 bits (258), Expect = e-141
 Identities = 474/546 (86%)
 Strand = Plus / Minus

                                                                        
Query: 221  acttcagtagggtcttcacgatggatttcacattcagcttcttcaggtcagtgtaggact 280
            ||||||| ||||| || ||||||||||| ||||| |||||||| ||||||||||| ||||
Sbjct: 1916 acttcagcagggttttaacgatggatttgacattgagcttcttgaggtcagtgtaagact 1857

                                                                        
Query: 281  gaccgcatccgacgaacatgaccggagatccagatatgtaaaccatggacagtgcggctc 340
            |||| || || ||||||||||| |||| ||||||||| |||||||| || ||||| ||||
Sbjct: 1856 gaccacagccaacgaacatgactggagctccagatatataaaccattgaaagtgcagctc 1797

                                                                        
Query: 341  caaccttgtcatcgatagtgtcaaacttggtgagcaggataccatcgatcagtctagctg 400
            |||||||||| ||||| ||||||||||||||||||||||| ||||| |||| ||| |  |
Sbjct: 1796 caaccttgtcgtcgatggtgtcaaacttggtgagcaggatgccatctatcaatctggtag 1737

                                                                        
Query: 401  ttggaacagtggaaagatctgccaatttctgattgaacttgttgagctgatcaactgcgt 460
            | || |||| |||||| ||||| |||||||| || || ||  |||| |||||||| || |
Sbjct: 1736 tagggacagcggaaaggtctgctaatttctggttaaatttagtgagttgatcaacagcat 1677

                                                                        
Query: 461  cattcccaaccaatgcctctcccacaaataagaccagatctggcttgttgagattgatga 520
            |||| ||||||||||| || || |||||||| || ||||||||  | |||||||||||||
Sbjct: 1676 cattaccaaccaatgcttccccaacaaataaaactagatctgggctattgagattgatga 1617

                                                                        
Query: 521  gcttggagagtgctctcatcagtggctcattatcctgcatacgaccagccgtatcaacaa 580
            ||||||||||||||||||| ||||||||||||||||||||||| ||||| || || ||||
Sbjct: 1616 gcttggagagtgctctcatgagtggctcattatcctgcatacgtccagcagtgtcgacaa 1557

                                                                        
Query: 581  gaacaacatctgatttgtttcgggtggcttcctggatagcttcttttgccacaactgctg 640
            ||||||||||||| || || || || |||||||| ||||| || ||||| ||||| ||||
Sbjct: 1556 gaacaacatctgacttattacgagtagcttcctgaatagcctcctttgcgacaaccgctg 1497

                                                                        
Query: 641  ggtccttctcatatcccttctcaaatataggtatctgaagcctgcgagcatgagtccgca 700
            | || || ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1496 gatctttttcatatcccttctcaaatataggtatctgaagcctgcgagcatgagtacgca 1437

                                                                        
Query: 701  gctgctcaacagcaccagatctgaaggtatcacatgctgccatcatgacactgaggttat 760
            | |||||||||||||||||||| ||||| |||||||||||||   | |||||||||||||
Sbjct: 1436 gttgctcaacagcaccagatctaaaggtgtcacatgctgccaggcttacactgaggttat 1377

                  
Query: 761  gctgaa 766
            ||||||
Sbjct: 1376 gctgaa 1371
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>gb|AY103682.1| Zea mays PCO122909 mRNA sequence
          Length = 1641

 Score =  511 bits (258), Expect = e-141
 Identities = 474/546 (86%)
 Strand = Plus / Minus

                                                                        
Query: 221  acttcagtagggtcttcacgatggatttcacattcagcttcttcaggtcagtgtaggact 280
            ||||||| ||||||||||| ||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 1382 acttcaggagggtcttcacaatggatttcacgttcagcttcttcaggtccgtgtaggact 1323

                                                                        
Query: 281  gaccgcatccgacgaacatgaccggagatccagatatgtaaaccatggacagtgcggctc 340
            |||| || || ||||||||||| |||| |||||||||||| |||||||| || || ||||
Sbjct: 1322 gaccacagccaacgaacatgactggagctccagatatgtagaccatggaaagcgctgctc 1263

                                                                        
Query: 341  caaccttgtcatcgatagtgtcaaacttggtgagcaggataccatcgatcagtctagctg 400
            |||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||| |
Sbjct: 1262 caaccttgtcgtcgatggtgtcaaacttggtgagcaggataccatcgatcaatctagcag 1203

                                                                        
Query: 401  ttggaacagtggaaagatctgccaatttctgattgaacttgttgagctgatcaactgcgt 460
            | |||||||  || || ||||| | |||||| || || ||  |||||||||| || || |
Sbjct: 1202 tgggaacagcagataggtctgctagtttctggttaaatttagtgagctgatccacagcat 1143

                                                                        
Query: 461  cattcccaaccaatgcctctcccacaaataagaccagatctggcttgttgagattgatga 520
            |||| ||||||||||| ||||| |||||||| ||||| |||||  | ||||||||||| |
Sbjct: 1142 catttccaaccaatgcttctccaacaaataaaaccaggtctgggctattgagattgatta 1083

                                                                        
Query: 521  gcttggagagtgctctcatcagtggctcattatcctgcatacgaccagccgtatcaacaa 580
            ||||||||||||| ||||| |||||||| || ||||||||||| ||||| || ||||| |
Sbjct: 1082 gcttggagagtgccctcatgagtggctcgttgtcctgcatacgtccagcagtgtcaacca 1023

                                                                        
Query: 581  gaacaacatctgatttgtttcgggtggcttcctggatagcttcttttgccacaactgctg 640
            ||||||||||||||||||| ||||| |||||||| ||||| ||  | || |||||||| |
Sbjct: 1022 gaacaacatctgatttgttccgggttgcttcctgaatagcctccctcgctacaactgccg 963

                                                                        
Query: 641  ggtccttctcatatcccttctcaaatataggtatctgaagcctgcgagcatgagtccgca 700
            | || |||||||| ||||||||||||||||||||||||||||| |  |||||||| | ||
Sbjct: 962  gatctttctcataacccttctcaaatataggtatctgaagcctccttgcatgagttctca 903

                                                                        
Query: 701  gctgctcaacagcaccagatctgaaggtatcacatgctgccatcatgacactgaggttat 760
            |||||||||||||||||||||||||||| ||||||||||| |   | |||||||||||||
Sbjct: 902  gctgctcaacagcaccagatctgaaggtgtcacatgctgcaagtgtaacactgaggttat 843

                  
Query: 761  gctgaa 766
            ||||||
Sbjct: 842  gctgaa 837
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>ref|NM_119206.3| Arabidopsis thaliana GTP binding / GTPase/ RNA binding /
            nucleoside-triphosphatase/ nucleotide binding / signal
            recognition particle binding AT4G30600 mRNA, complete cds
          Length = 2248

 Score =  188 bits (95), Expect = 2e-44
 Identities = 278/339 (82%)
 Strand = Plus / Minus

                                                                        
Query: 426  tttctgattgaacttgttgagctgatcaactgcgtcattcccaaccaatgcctctcccac 485
            |||||||||||||||   |||||| || ||||| || || ||||| |  || || || ||
Sbjct: 1800 tttctgattgaacttcgagagctggtctactgcatcgtttccaacaagagcttcaccaac 1741

                                                                        
Query: 486  aaataagaccagatctggcttgttgagattgatgagcttggagagtgctctcatcagtgg 545
            ||| |||||||  || ||||  || || ||||||||||| ||||||||||||||||  ||
Sbjct: 1740 aaacaagaccaagtccggctgattaaggttgatgagctttgagagtgctctcatcaaagg 1681

                                                                        
Query: 546  ctcattatcctgcatacgaccagccgtatcaacaagaacaacatctgatttgtttcgggt 605
             |||||||||||||| |||||||| || ||||||||||||||||| |||   ||||| ||
Sbjct: 1680 ttcattatcctgcatccgaccagctgtgtcaacaagaacaacatcggatccatttcgagt 1621

                                                                        
Query: 606  ggcttcctggatagcttcttttgccacaactgctgggtccttctcatatcccttctcaaa 665
             ||||| || || |||||||| || || |||||||| ||||| ||||| ||||| |||||
Sbjct: 1620 tgcttcttgtatggcttctttagcaactactgctggatccttttcataacccttttcaaa 1561

                                                                        
Query: 666  tataggtatctgaagcctgcgagcatgagtccgcagctgctcaacagcaccagatctgaa 725
            ||| |||||||| | ||| |||||||||||||| | |||||||||||| ||||| | |||
Sbjct: 1560 tatcggtatctgtaacctacgagcatgagtccgtaactgctcaacagctccagaacggaa 1501

                                                   
Query: 726  ggtatcacatgctgccatcatgacactgaggttatgctg 764
             || ||||| || |||||||| |||||||  ||||||||
Sbjct: 1500 agtgtcacaagcagccatcattacactgaccttatgctg 1462



 Score =  111 bits (56), Expect = 3e-21
 Identities = 137/164 (83%)
 Strand = Plus / Minus

                                                                        
Query: 232  gtcttcacgatggatttcacattcagcttcttcaggtcagtgtaggactgaccgcatccg 291
            ||||| || |||| ||| ||||| |||||||||||||||||||| ||||| || || || 
Sbjct: 1994 gtcttgactatggctttgacattaagcttcttcaggtcagtgtaagactggccacaaccc 1935

                                                                        
Query: 292  acgaacatgaccggagatccagatatgtaaaccatggacagtgcggctccaaccttgtca 351
            |||||||| ||||| ||||| |||||||||||||| ||||  || ||||| |||||||| 
Sbjct: 1934 acgaacataaccggtgatcccgatatgtaaaccatagacaacgctgctccgaccttgtcg 1875

                                                        
Query: 352  tcgatagtgtcaaacttggtgagcaggataccatcgatcagtct 395
            || || || |||||||| || || | ||| ||||||||||||||
Sbjct: 1874 tcaatggtatcaaactttgtaagtaagattccatcgatcagtct 1831
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>gb|AY133612.1| Arabidopsis thaliana AT4g30600/F17I23_60 mRNA, complete cds
          Length = 1905

 Score =  188 bits (95), Expect = 2e-44
 Identities = 278/339 (82%)
 Strand = Plus / Minus

                                                                        
Query: 426  tttctgattgaacttgttgagctgatcaactgcgtcattcccaaccaatgcctctcccac 485
            |||||||||||||||   |||||| || ||||| || || ||||| |  || || || ||
Sbjct: 1698 tttctgattgaacttcgagagctggtctactgcatcgtttccaacaagagcttcaccaac 1639

                                                                        
Query: 486  aaataagaccagatctggcttgttgagattgatgagcttggagagtgctctcatcagtgg 545
            ||| |||||||  || ||||  || || ||||||||||| ||||||||||||||||  ||
Sbjct: 1638 aaacaagaccaagtccggctgattaaggttgatgagctttgagagtgctctcatcaaagg 1579

                                                                        
Query: 546  ctcattatcctgcatacgaccagccgtatcaacaagaacaacatctgatttgtttcgggt 605
             |||||||||||||| |||||||| || ||||||||||||||||| |||   ||||| ||
Sbjct: 1578 ttcattatcctgcatccgaccagctgtgtcaacaagaacaacatcggatccatttcgagt 1519

                                                                        
Query: 606  ggcttcctggatagcttcttttgccacaactgctgggtccttctcatatcccttctcaaa 665
             ||||| || || |||||||| || || |||||||| ||||| ||||| ||||| |||||
Sbjct: 1518 tgcttcttgtatggcttctttagcaactactgctggatccttttcataacccttttcaaa 1459

                                                                        
Query: 666  tataggtatctgaagcctgcgagcatgagtccgcagctgctcaacagcaccagatctgaa 725
            ||| |||||||| | ||| |||||||||||||| | |||||||||||| ||||| | |||
Sbjct: 1458 tatcggtatctgtaacctacgagcatgagtccgtaactgctcaacagctccagaacggaa 1399

                                                   
Query: 726  ggtatcacatgctgccatcatgacactgaggttatgctg 764
             || ||||| || |||||||| |||||||  ||||||||
Sbjct: 1398 agtgtcacaagcagccatcattacactgaccttatgctg 1360



 Score =  111 bits (56), Expect = 3e-21
 Identities = 137/164 (83%)
 Strand = Plus / Minus

                                                                        
Query: 232  gtcttcacgatggatttcacattcagcttcttcaggtcagtgtaggactgaccgcatccg 291
            ||||| || |||| ||| ||||| |||||||||||||||||||| ||||| || || || 
Sbjct: 1892 gtcttgactatggctttgacattaagcttcttcaggtcagtgtaagactggccacaaccc 1833

                                                                        
Query: 292  acgaacatgaccggagatccagatatgtaaaccatggacagtgcggctccaaccttgtca 351
            |||||||| ||||| ||||| |||||||||||||| ||||  || ||||| |||||||| 
Sbjct: 1832 acgaacataaccggtgatcccgatatgtaaaccatagacaacgctgctccgaccttgtcg 1773

                                                        
Query: 352  tcgatagtgtcaaacttggtgagcaggataccatcgatcagtct 395
            || || || |||||||| || || | ||| ||||||||||||||
Sbjct: 1772 tcaatggtatcaaactttgtaagtaagattccatcgatcagtct 1729
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>gb|AY065066.1| Arabidopsis thaliana AT4g30600/F17I23_60 mRNA, complete cds
          Length = 2265

 Score =  188 bits (95), Expect = 2e-44
 Identities = 278/339 (82%)
 Strand = Plus / Minus

                                                                        
Query: 426  tttctgattgaacttgttgagctgatcaactgcgtcattcccaaccaatgcctctcccac 485
            |||||||||||||||   |||||| || ||||| || || ||||| |  || || || ||
Sbjct: 1832 tttctgattgaacttcgagagctggtctactgcatcgtttccaacaagagcttcaccaac 1773

                                                                        
Query: 486  aaataagaccagatctggcttgttgagattgatgagcttggagagtgctctcatcagtgg 545
            ||| |||||||  || ||||  || || ||||||||||| ||||||||||||||||  ||
Sbjct: 1772 aaacaagaccaagtccggctgattaaggttgatgagctttgagagtgctctcatcaaagg 1713

                                                                        
Query: 546  ctcattatcctgcatacgaccagccgtatcaacaagaacaacatctgatttgtttcgggt 605
             |||||||||||||| |||||||| || ||||||||||||||||| |||   ||||| ||
Sbjct: 1712 ttcattatcctgcatccgaccagctgtgtcaacaagaacaacatcggatccatttcgagt 1653

                                                                        
Query: 606  ggcttcctggatagcttcttttgccacaactgctgggtccttctcatatcccttctcaaa 665
             ||||| || || |||||||| || || |||||||| ||||| ||||| ||||| |||||
Sbjct: 1652 tgcttcttgtatggcttctttagcaactactgctggatccttttcataacccttttcaaa 1593

                                                                        
Query: 666  tataggtatctgaagcctgcgagcatgagtccgcagctgctcaacagcaccagatctgaa 725
            ||| |||||||| | ||| |||||||||||||| | |||||||||||| ||||| | |||
Sbjct: 1592 tatcggtatctgtaacctacgagcatgagtccgtaactgctcaacagctccagaacggaa 1533

                                                   
Query: 726  ggtatcacatgctgccatcatgacactgaggttatgctg 764
             || ||||| || |||||||| |||||||  ||||||||
Sbjct: 1532 agtgtcacaagcagccatcattacactgaccttatgctg 1494



 Score =  111 bits (56), Expect = 3e-21
 Identities = 137/164 (83%)
 Strand = Plus / Minus

                                                                        
Query: 232  gtcttcacgatggatttcacattcagcttcttcaggtcagtgtaggactgaccgcatccg 291
            ||||| || |||| ||| ||||| |||||||||||||||||||| ||||| || || || 
Sbjct: 2026 gtcttgactatggctttgacattaagcttcttcaggtcagtgtaagactggccacaaccc 1967

                                                                        
Query: 292  acgaacatgaccggagatccagatatgtaaaccatggacagtgcggctccaaccttgtca 351
            |||||||| ||||| ||||| |||||||||||||| ||||  || ||||| |||||||| 
Sbjct: 1966 acgaacataaccggtgatcccgatatgtaaaccatagacaacgctgctccgaccttgtcg 1907

                                                        
Query: 352  tcgatagtgtcaaacttggtgagcaggataccatcgatcagtct 395
            || || || |||||||| || || | ||| ||||||||||||||
Sbjct: 1906 tcaatggtatcaaactttgtaagtaagattccatcgatcagtct 1863
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>gb|AY372539.1| Cucumis sativus signal recognition particle receptor protein mRNA,
           partial cds
          Length = 1128

 Score =  167 bits (84), Expect = 7e-38
 Identities = 264/324 (81%)
 Strand = Plus / Minus

                                                                       
Query: 426 tttctgattgaacttgttgagctgatcaactgcgtcattcccaaccaatgcctctcccac 485
           |||||||||||||||    || ||||| || || ||||||||||| |  ||||| || ||
Sbjct: 735 tttctgattgaacttcgaaagttgatcgacagcatcattcccaacgagggcctccccaac 676

                                                                       
Query: 486 aaataagaccagatctggcttgttgagattgatgagcttggagagtgctctcatcagtgg 545
            || ||||| ||||| ||  |||| || ||||| ||||| ||||| |||||||| |||||
Sbjct: 675 gaacaagacaagatccggactgttaaggttgataagctttgagagagctctcatgagtgg 616

                                                                       
Query: 546 ctcattatcctgcatacgaccagccgtatcaacaagaacaacatctgatttgtttcgggt 605
            |||||||||||||| |  ||||| |||||||||||||| |||||||||  ||| |||| 
Sbjct: 615 ttcattatcctgcattctcccagctgtatcaacaagaactacatctgatccgttgcggga 556

                                                                       
Query: 606 ggcttcctggatagcttcttttgccacaactgctgggtccttctcatatcccttctcaaa 665
            || || ||||| |||||||| || ||||| || || || |||||||| |||||||||||
Sbjct: 555 tgcctcttggattgcttctttagctacaaccgcaggatctttctcataacccttctcaaa 496

                                                                       
Query: 666 tataggtatctgaagcctgcgagcatgagtccgcagctgctcaacagcaccagatctgaa 725
           |||||| |||||||| || ||||||||||| |  ||||| || || || |||||||| ||
Sbjct: 495 tatagggatctgaagtctacgagcatgagttctaagctgttccactgctccagatctaaa 436

                                   
Query: 726 ggtatcacatgctgccatcatgac 749
            |||||||| || |||||||||||
Sbjct: 435 tgtatcacaagcagccatcatgac 412



 Score =  131 bits (66), Expect = 4e-27
 Identities = 135/158 (85%)
 Strand = Plus / Minus

                                                                       
Query: 238 acgatggatttcacattcagcttcttcaggtcagtgtaggactgaccgcatccgacgaac 297
           ||||| ||||| ||||| |||||||| ||||| || || ||||| || || |||||||||
Sbjct: 923 acgattgatttgacattgagcttcttgaggtcggtatatgactgtccacagccgacgaac 864

                                                                       
Query: 298 atgaccggagatccagatatgtaaaccatggacagtgcggctccaaccttgtcatcgata 357
           || ||||| | |||||||||||| ||||| |||| ||| |||||||||||||| ||||| 
Sbjct: 863 attaccggtgctccagatatgtagaccatagacaatgctgctccaaccttgtcgtcgatg 804

                                                 
Query: 358 gtgtcaaacttggtgagcaggataccatcgatcagtct 395
           ||||| ||||| ||||||| ||||||||| ||||||||
Sbjct: 803 gtgtcgaactttgtgagcaagataccatcaatcagtct 766
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>emb|AL161577.2|ATCHRIV73 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 73
          Length = 194862

 Score =  135 bits (68), Expect = 2e-28
 Identities = 140/164 (85%)
 Strand = Plus / Plus

                                                                         
Query: 514   ttgatgagcttggagagtgctctcatcagtggctcattatcctgcatacgaccagccgta 573
             ||||||||||| ||||||||||||||||  || |||||||||||||| |||||||| || 
Sbjct: 84327 ttgatgagctttgagagtgctctcatcaaaggttcattatcctgcatccgaccagctgtg 84386

                                                                         
Query: 574   tcaacaagaacaacatctgatttgtttcgggtggcttcctggatagcttcttttgccaca 633
             ||||||||||||||||| |||   ||||| || ||||| || || |||||||| || || 
Sbjct: 84387 tcaacaagaacaacatcggatccatttcgagttgcttcttgtatggcttctttagcaact 84446

                                                         
Query: 634   actgctgggtccttctcatatcccttctcaaatataggtatctg 677
             |||||||| ||||| ||||| ||||| |||||||| ||||||||
Sbjct: 84447 actgctggatccttttcataacccttttcaaatatcggtatctg 84490



 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 86/100 (86%)
 Strand = Plus / Plus

                                                                         
Query: 232   gtcttcacgatggatttcacattcagcttcttcaggtcagtgtaggactgaccgcatccg 291
             ||||| || |||| ||| ||||| |||||||||||||||||||| ||||| || || || 
Sbjct: 83882 gtcttgactatggctttgacattaagcttcttcaggtcagtgtaagactggccacaaccc 83941

                                                     
Query: 292   acgaacatgaccggagatccagatatgtaaaccatggaca 331
             |||||||| ||||| ||||| |||||||||||||| ||||
Sbjct: 83942 acgaacataaccggtgatcccgatatgtaaaccatagaca 83981



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 68/80 (85%)
 Strand = Plus / Plus

                                                                         
Query: 685   cgagcatgagtccgcagctgctcaacagcaccagatctgaaggtatcacatgctgccatc 744
             |||||||||||||| | |||||||||||| ||||| | ||| || ||||| || ||||||
Sbjct: 84605 cgagcatgagtccgtaactgctcaacagctccagaacggaaagtgtcacaagcagccatc 84664

                                 
Query: 745   atgacactgaggttatgctg 764
             || |||||||  ||||||||
Sbjct: 84665 attacactgaccttatgctg 84684
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>gb|AF160182.1|F17I23 Arabidopsis thaliana BAC F17I23
          Length = 134784

 Score =  135 bits (68), Expect = 2e-28
 Identities = 140/164 (85%)
 Strand = Plus / Minus

                                                                         
Query: 514   ttgatgagcttggagagtgctctcatcagtggctcattatcctgcatacgaccagccgta 573
             ||||||||||| ||||||||||||||||  || |||||||||||||| |||||||| || 
Sbjct: 16990 ttgatgagctttgagagtgctctcatcaaaggttcattatcctgcatccgaccagctgtg 16931

                                                                         
Query: 574   tcaacaagaacaacatctgatttgtttcgggtggcttcctggatagcttcttttgccaca 633
             ||||||||||||||||| |||   ||||| || ||||| || || |||||||| || || 
Sbjct: 16930 tcaacaagaacaacatcggatccatttcgagttgcttcttgtatggcttctttagcaact 16871

                                                         
Query: 634   actgctgggtccttctcatatcccttctcaaatataggtatctg 677
             |||||||| ||||| ||||| ||||| |||||||| ||||||||
Sbjct: 16870 actgctggatccttttcataacccttttcaaatatcggtatctg 16827



 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 86/100 (86%)
 Strand = Plus / Minus

                                                                         
Query: 232   gtcttcacgatggatttcacattcagcttcttcaggtcagtgtaggactgaccgcatccg 291
             ||||| || |||| ||| ||||| |||||||||||||||||||| ||||| || || || 
Sbjct: 17435 gtcttgactatggctttgacattaagcttcttcaggtcagtgtaagactggccacaaccc 17376

                                                     
Query: 292   acgaacatgaccggagatccagatatgtaaaccatggaca 331
             |||||||| ||||| ||||| |||||||||||||| ||||
Sbjct: 17375 acgaacataaccggtgatcccgatatgtaaaccatagaca 17336



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                         
Query: 685   cgagcatgagtccgcagctgctcaacagcaccagatctgaaggtatcacatgctgccatc 744
             |||||||||||||| | |||||||||||| ||||| | ||| || ||||| || ||||||
Sbjct: 16712 cgagcatgagtccgtaactgctcaacagctccagaacggaaagtgtcacaagcagccatc 16653

                                 
Query: 745   atgacactgaggttatgctg 764
             || |||||||  ||||||||
Sbjct: 16652 attacactgaccttatgctg 16633
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  125 bits (63), Expect = 2e-25
 Identities = 102/115 (88%)
 Strand = Plus / Plus

                                                                            
Query: 443      tgagctgatcaactgcgtcattcccaaccaatgcctctcccacaaataagaccagatctg 502
                |||| |||||||| || ||||| ||||||||||| || || |||||||| || |||||||
Sbjct: 23711381 tgagttgatcaacagcatcattaccaaccaatgcttccccaacaaataaaactagatctg 23711440

                                                                       
Query: 503      gcttgttgagattgatgagcttggagagtgctctcatcagtggctcattatcctg 557
                |  | |||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 23711441 ggctattgagattgatgagcttggagagtgctctcatgagtggctcattatcctg 23711495



 Score =  123 bits (62), Expect = 9e-25
 Identities = 110/126 (87%)
 Strand = Plus / Plus

                                                                            
Query: 221      acttcagtagggtcttcacgatggatttcacattcagcttcttcaggtcagtgtaggact 280
                ||||||| ||||| || ||||||||||| ||||| |||||||| ||||||||||| ||||
Sbjct: 23710827 acttcagcagggttttaacgatggatttgacattgagcttcttgaggtcagtgtaagact 23710886

                                                                            
Query: 281      gaccgcatccgacgaacatgaccggagatccagatatgtaaaccatggacagtgcggctc 340
                |||| || || ||||||||||| |||| ||||||||| |||||||| || ||||| ||||
Sbjct: 23710887 gaccacagccaacgaacatgactggagctccagatatataaaccattgaaagtgcagctc 23710946

                      
Query: 341      caacct 346
                ||||||
Sbjct: 23710947 caacct 23710952



 Score =  119 bits (60), Expect = 1e-23
 Identities = 84/92 (91%)
 Strand = Plus / Plus

                                                                            
Query: 675      ctgaagcctgcgagcatgagtccgcagctgctcaacagcaccagatctgaaggtatcaca 734
                ||||||||||||||||||||| ||||| |||||||||||||||||||| ||||| |||||
Sbjct: 23712046 ctgaagcctgcgagcatgagtacgcagttgctcaacagcaccagatctaaaggtgtcaca 23712105

                                                
Query: 735      tgctgccatcatgacactgaggttatgctgaa 766
                ||||||||   | |||||||||||||||||||
Sbjct: 23712106 tgctgccaggcttacactgaggttatgctgaa 23712137



 Score =  111 bits (56), Expect = 3e-21
 Identities = 107/124 (86%)
 Strand = Plus / Plus

                                                                            
Query: 554      cctgcatacgaccagccgtatcaacaagaacaacatctgatttgtttcgggtggcttcct 613
                |||||||||| ||||| || || ||||||||||||||||| || || || || |||||||
Sbjct: 23711592 cctgcatacgtccagcagtgtcgacaagaacaacatctgacttattacgagtagcttcct 23711651

                                                                            
Query: 614      ggatagcttcttttgccacaactgctgggtccttctcatatcccttctcaaatataggta 673
                | ||||| || ||||| ||||| ||||| || || |||||||||||||||||||||||||
Sbjct: 23711652 gaatagcctcctttgcgacaaccgctggatctttttcatatcccttctcaaatataggta 23711711

                    
Query: 674      tctg 677
                ||||
Sbjct: 23711712 tctg 23711715



 Score = 73.8 bits (37), Expect = 8e-10
 Identities = 76/89 (85%)
 Strand = Plus / Plus

                                                                            
Query: 343      accttgtcatcgatagtgtcaaacttggtgagcaggataccatcgatcagtctagctgtt 402
                |||||||| ||||| ||||||||||||||||||||||| ||||| |||| ||| |  || 
Sbjct: 23711035 accttgtcgtcgatggtgtcaaacttggtgagcaggatgccatctatcaatctggtagta 23711094

                                             
Query: 403      ggaacagtggaaagatctgccaatttctg 431
                || |||| |||||| ||||| ||||||||
Sbjct: 23711095 gggacagcggaaaggtctgctaatttctg 23711123
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>dbj|AP005391.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
           BAC clone:OSJNBb0092C08
          Length = 131049

 Score =  125 bits (63), Expect = 2e-25
 Identities = 102/115 (88%)
 Strand = Plus / Plus

                                                                       
Query: 443 tgagctgatcaactgcgtcattcccaaccaatgcctctcccacaaataagaccagatctg 502
           |||| |||||||| || ||||| ||||||||||| || || |||||||| || |||||||
Sbjct: 581 tgagttgatcaacagcatcattaccaaccaatgcttccccaacaaataaaactagatctg 640

                                                                  
Query: 503 gcttgttgagattgatgagcttggagagtgctctcatcagtggctcattatcctg 557
           |  | |||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 641 ggctattgagattgatgagcttggagagtgctctcatgagtggctcattatcctg 695



 Score =  123 bits (62), Expect = 9e-25
 Identities = 110/126 (87%)
 Strand = Plus / Plus

                                                                       
Query: 221 acttcagtagggtcttcacgatggatttcacattcagcttcttcaggtcagtgtaggact 280
           ||||||| ||||| || ||||||||||| ||||| |||||||| ||||||||||| ||||
Sbjct: 27  acttcagcagggttttaacgatggatttgacattgagcttcttgaggtcagtgtaagact 86

                                                                       
Query: 281 gaccgcatccgacgaacatgaccggagatccagatatgtaaaccatggacagtgcggctc 340
           |||| || || ||||||||||| |||| ||||||||| |||||||| || ||||| ||||
Sbjct: 87  gaccacagccaacgaacatgactggagctccagatatataaaccattgaaagtgcagctc 146

                 
Query: 341 caacct 346
           ||||||
Sbjct: 147 caacct 152



 Score =  119 bits (60), Expect = 1e-23
 Identities = 84/92 (91%)
 Strand = Plus / Plus

                                                                        
Query: 675  ctgaagcctgcgagcatgagtccgcagctgctcaacagcaccagatctgaaggtatcaca 734
            ||||||||||||||||||||| ||||| |||||||||||||||||||| ||||| |||||
Sbjct: 1246 ctgaagcctgcgagcatgagtacgcagttgctcaacagcaccagatctaaaggtgtcaca 1305

                                            
Query: 735  tgctgccatcatgacactgaggttatgctgaa 766
            ||||||||   | |||||||||||||||||||
Sbjct: 1306 tgctgccaggcttacactgaggttatgctgaa 1337



 Score =  111 bits (56), Expect = 3e-21
 Identities = 107/124 (86%)
 Strand = Plus / Plus

                                                                       
Query: 554 cctgcatacgaccagccgtatcaacaagaacaacatctgatttgtttcgggtggcttcct 613
           |||||||||| ||||| || || ||||||||||||||||| || || || || |||||||
Sbjct: 792 cctgcatacgtccagcagtgtcgacaagaacaacatctgacttattacgagtagcttcct 851

                                                                       
Query: 614 ggatagcttcttttgccacaactgctgggtccttctcatatcccttctcaaatataggta 673
           | ||||| || ||||| ||||| ||||| || || |||||||||||||||||||||||||
Sbjct: 852 gaatagcctcctttgcgacaaccgctggatctttttcatatcccttctcaaatataggta 911

               
Query: 674 tctg 677
           ||||
Sbjct: 912 tctg 915



 Score = 73.8 bits (37), Expect = 8e-10
 Identities = 76/89 (85%)
 Strand = Plus / Plus

                                                                       
Query: 343 accttgtcatcgatagtgtcaaacttggtgagcaggataccatcgatcagtctagctgtt 402
           |||||||| ||||| ||||||||||||||||||||||| ||||| |||| ||| |  || 
Sbjct: 235 accttgtcgtcgatggtgtcaaacttggtgagcaggatgccatctatcaatctggtagta 294

                                        
Query: 403 ggaacagtggaaagatctgccaatttctg 431
           || |||| |||||| ||||| ||||||||
Sbjct: 295 gggacagcggaaaggtctgctaatttctg 323
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>dbj|AP004643.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1113_A10
          Length = 160089

 Score =  125 bits (63), Expect = 2e-25
 Identities = 102/115 (88%)
 Strand = Plus / Plus

                                                                          
Query: 443    tgagctgatcaactgcgtcattcccaaccaatgcctctcccacaaataagaccagatctg 502
              |||| |||||||| || ||||| ||||||||||| || || |||||||| || |||||||
Sbjct: 118977 tgagttgatcaacagcatcattaccaaccaatgcttccccaacaaataaaactagatctg 119036

                                                                     
Query: 503    gcttgttgagattgatgagcttggagagtgctctcatcagtggctcattatcctg 557
              |  | |||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 119037 ggctattgagattgatgagcttggagagtgctctcatgagtggctcattatcctg 119091



 Score =  123 bits (62), Expect = 9e-25
 Identities = 110/126 (87%)
 Strand = Plus / Plus

                                                                          
Query: 221    acttcagtagggtcttcacgatggatttcacattcagcttcttcaggtcagtgtaggact 280
              ||||||| ||||| || ||||||||||| ||||| |||||||| ||||||||||| ||||
Sbjct: 118423 acttcagcagggttttaacgatggatttgacattgagcttcttgaggtcagtgtaagact 118482

                                                                          
Query: 281    gaccgcatccgacgaacatgaccggagatccagatatgtaaaccatggacagtgcggctc 340
              |||| || || ||||||||||| |||| ||||||||| |||||||| || ||||| ||||
Sbjct: 118483 gaccacagccaacgaacatgactggagctccagatatataaaccattgaaagtgcagctc 118542

                    
Query: 341    caacct 346
              ||||||
Sbjct: 118543 caacct 118548



 Score =  119 bits (60), Expect = 1e-23
 Identities = 84/92 (91%)
 Strand = Plus / Plus

                                                                          
Query: 675    ctgaagcctgcgagcatgagtccgcagctgctcaacagcaccagatctgaaggtatcaca 734
              ||||||||||||||||||||| ||||| |||||||||||||||||||| ||||| |||||
Sbjct: 119642 ctgaagcctgcgagcatgagtacgcagttgctcaacagcaccagatctaaaggtgtcaca 119701

                                              
Query: 735    tgctgccatcatgacactgaggttatgctgaa 766
              ||||||||   | |||||||||||||||||||
Sbjct: 119702 tgctgccaggcttacactgaggttatgctgaa 119733



 Score =  111 bits (56), Expect = 3e-21
 Identities = 107/124 (86%)
 Strand = Plus / Plus

                                                                          
Query: 554    cctgcatacgaccagccgtatcaacaagaacaacatctgatttgtttcgggtggcttcct 613
              |||||||||| ||||| || || ||||||||||||||||| || || || || |||||||
Sbjct: 119188 cctgcatacgtccagcagtgtcgacaagaacaacatctgacttattacgagtagcttcct 119247

                                                                          
Query: 614    ggatagcttcttttgccacaactgctgggtccttctcatatcccttctcaaatataggta 673
              | ||||| || ||||| ||||| ||||| || || |||||||||||||||||||||||||
Sbjct: 119248 gaatagcctcctttgcgacaaccgctggatctttttcatatcccttctcaaatataggta 119307

                  
Query: 674    tctg 677
              ||||
Sbjct: 119308 tctg 119311



 Score = 73.8 bits (37), Expect = 8e-10
 Identities = 76/89 (85%)
 Strand = Plus / Plus

                                                                          
Query: 343    accttgtcatcgatagtgtcaaacttggtgagcaggataccatcgatcagtctagctgtt 402
              |||||||| ||||| ||||||||||||||||||||||| ||||| |||| ||| |  || 
Sbjct: 118631 accttgtcgtcgatggtgtcaaacttggtgagcaggatgccatctatcaatctggtagta 118690

                                           
Query: 403    ggaacagtggaaagatctgccaatttctg 431
              || |||| |||||| ||||| ||||||||
Sbjct: 118691 gggacagcggaaaggtctgctaatttctg 118719
to top
>gb|AC136953.17| Medicago truncatula clone mth2-20h6, complete sequence
          Length = 94019

 Score = 93.7 bits (47), Expect = 8e-16
 Identities = 98/115 (85%)
 Strand = Plus / Minus

                                                                         
Query: 232   gtcttcacgatggatttcacattcagcttcttcaggtcagtgtaggactgaccgcatccg 291
             |||||||| ||||| || || || || ||||| |||||||| |||||||| |||||||| 
Sbjct: 21137 gtcttcacaatggacttgacgttgagtttcttgaggtcagtataggactgtccgcatccc 21078

                                                                    
Query: 292   acgaacatgaccggagatccagatatgtaaaccatggacagtgcggctccaacct 346
             || |||||||| |||| |||||||||||||||||| || ||||| ||||| ||||
Sbjct: 21077 acaaacatgactggagctccagatatgtaaaccattgaaagtgcagctcccacct 21023



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 96/113 (84%)
 Strand = Plus / Minus

                                                                         
Query: 445   agctgatcaactgcgtcattcccaaccaatgcctctcccacaaataagaccagatctggc 504
             |||||||||||||| ||||| ||||||| ||| ||||| ||||||||||| || || || 
Sbjct: 20567 agctgatcaactgcatcattgccaaccagtgcttctccaacaaataagacaaggtcagga 20508

                                                                  
Query: 505   ttgttgagattgatgagcttggagagtgctctcatcagtggctcattatcctg 557
             ||||| || | ||| ||||| || ||||||||||||| ||| |||||||||||
Sbjct: 20507 ttgttaaggtagatcagctttgacagtgctctcatcaatggttcattatcctg 20455



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 104/126 (82%)
 Strand = Plus / Minus

                                                                         
Query: 554   cctgcatacgaccagccgtatcaacaagaacaacatctgatttgtttcgggtggcttcct 613
             |||||||||||||||| ||||| || || |||||||| ||    || || |  |||||||
Sbjct: 19777 cctgcatacgaccagctgtatcgactagcacaacatccgaaccattccgtgaagcttcct 19718

                                                                         
Query: 614   ggatagcttcttttgccacaactgctgggtccttctcatatcccttctcaaatataggta 673
             | || ||||||||||||||||| || || || || ||||| ||||||||||||||||| |
Sbjct: 19717 gaattgcttcttttgccacaacagcaggatctttttcataacccttctcaaatataggga 19658

                   
Query: 674   tctgaa 679
             ||||||
Sbjct: 19657 tctgaa 19652



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 66/76 (86%)
 Strand = Plus / Minus

                                                                         
Query: 675   ctgaagcctgcgagcatgagtccgcagctgctcaacagcaccagatctgaaggtatcaca 734
             |||||| ||||| ||||||||||||| |||||||||||| || ||||  || ||||||||
Sbjct: 19571 ctgaagtctgcgtgcatgagtccgcaactgctcaacagctcctgatcgaaatgtatcaca 19512

                             
Query: 735   tgctgccatcatgaca 750
              || ||||||||||||
Sbjct: 19511 agcagccatcatgaca 19496



 Score = 50.1 bits (25), Expect = 0.011
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                              
Query: 343   accttgtcatcgatagtgtcaaacttggtgagcaggataccatcgatca 391
             ||||| ||||| |||||||||||||| ||||||| ||| ||||| ||||
Sbjct: 20772 accttatcatcaatagtgtcaaactttgtgagcaagatcccatcaatca 20724
to top
>emb|AJ293426.1|BOL293426 Brassica oleracea partial mRNA for hypothetical protein, clone
           LSC815, differential screening experiment
          Length = 300

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 100/119 (84%)
 Strand = Plus / Minus

                                                                       
Query: 250 acattcagcttcttcaggtcagtgtaggactgaccgcatccgacgaacatgaccggagat 309
           ||||| |||||||||||||||||||| ||||| || || || |||||||| ||||| | |
Sbjct: 183 acattgagcttcttcaggtcagtgtaagactggccacaacccacgaacataaccggtgct 124

                                                                      
Query: 310 ccagatatgtaaaccatggacagtgcggctccaaccttgtcatcgatagtgtcaaactt 368
           || |||||||||||||| || | ||| ||||||||||| || || || || ||||||||
Sbjct: 123 cccgatatgtaaaccatcgataatgctgctccaaccttatcgtcaatggtatcaaactt 65
to top
>ref|XM_684658.1| PREDICTED: Danio rerio similar to signal recognition particle
           receptor (docking protein) (LOC561252), partial mRNA
          Length = 1125

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                 
Query: 337 gctccaaccttgtcatcgatagtgtcaaacttggtgag 374
           ||||| ||||||||||| ||||||||||||||||||||
Sbjct: 107 gctcccaccttgtcatcaatagtgtcaaacttggtgag 70
to top
>ref|XM_692426.1| PREDICTED: Danio rerio similar to signal recognition particle
           receptor (docking protein) (LOC569063), mRNA
          Length = 1587

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                 
Query: 337 gctccaaccttgtcatcgatagtgtcaaacttggtgag 374
           ||||| ||||||||||| ||||||||||||||||||||
Sbjct: 569 gctcccaccttgtcatcaatagtgtcaaacttggtgag 532
to top
>ref|XM_947200.1| Theileria annulata strain Ankara signal recognition particle receptor
            subunit alpha (TA13100) partial mRNA
          Length = 1644

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                     
Query: 537  catcagtggctcattatcctgcatacgaccagccgtatcaa 577
            ||||| |||||||||||||||||||||||| || |||||||
Sbjct: 1338 catcaatggctcattatcctgcatacgacccgctgtatcaa 1298



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                            
Query: 322  accatggacagtgcggctccaaccttgtcatc 353
            |||||||| |||||||||||||||||||||||
Sbjct: 1541 accatggatagtgcggctccaaccttgtcatc 1510
to top
>ref|XM_792097.1| PREDICTED: Strongylocentrotus purpuratus similar to signal
            recognition particle receptor (docking protein)
            (LOC592583), partial mRNA
          Length = 1674

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 110/137 (80%)
 Strand = Plus / Minus

                                                                        
Query: 433  ttgaacttgttgagctgatcaactgcgtcattcccaaccaatgcctctcccacaaataag 492
            ||||||||| |||||||||| || || || ||||| ||||  |||||||| ||||| |  
Sbjct: 1586 ttgaacttggtgagctgatccacagcctcgttccctaccagagcctctccaacaaacagc 1527

                                                                        
Query: 493  accagatctggcttgttgagattgatgagcttggagagtgctctcatcagtggctcatta 552
            ||||| |||||    || |  ||||| | |||||||||||| ||||| |||||||| || 
Sbjct: 1526 accaggtctggacgattcaccttgatcaacttggagagtgccctcatgagtggctcgttg 1467

                             
Query: 553  tcctgcatacgaccagc 569
            |||||||| ||||||||
Sbjct: 1466 tcctgcattcgaccagc 1450



 Score = 44.1 bits (22), Expect = 0.67
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 345  cttgtcatcgatagtgtcaaacttggtgag 374
            ||||||||| || |||||||||||||||||
Sbjct: 1674 cttgtcatcaatggtgtcaaacttggtgag 1645
to top
>gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome
          Length = 2572079

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                   
Query: 556     tgcatacgaccagccgtatcaacaagaacaacatct 591
               |||| |||||||||||||||||||| ||||||||||
Sbjct: 1128558 tgcaaacgaccagccgtatcaacaataacaacatct 1128593
to top
>ref|XM_446853.1| Candida glabrata CBS138, CAGL0H01265g partial mRNA
          Length = 1818

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                          
Query: 709  acagcaccagatctgaaggtatcacatgct 738
            ||||||||||||||||| ||||||||||||
Sbjct: 1274 acagcaccagatctgaaagtatcacatgct 1245
to top
>emb|CR380954.1| Candida glabrata strain CBS138 chromosome H complete sequence
          Length = 1050361

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                            
Query: 709    acagcaccagatctgaaggtatcacatgct 738
              ||||||||||||||||| ||||||||||||
Sbjct: 121438 acagcaccagatctgaaagtatcacatgct 121467
to top
>emb|AJ851760.1| Gallus gallus mRNA for hypothetical protein, clone 28a6
          Length = 3102

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                              
Query: 343  accttgtcatcgatagtgtcaaacttggtgagca 376
            |||||||||||||| || ||||||||||||||||
Sbjct: 1845 accttgtcatcgatggtatcaaacttggtgagca 1812
to top
>ref|NM_001039277.1| Gallus gallus signal recognition particle receptor ('docking
            protein') (SRPR), mRNA
          Length = 3102

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                              
Query: 343  accttgtcatcgatagtgtcaaacttggtgagca 376
            |||||||||||||| || ||||||||||||||||
Sbjct: 1845 accttgtcatcgatggtatcaaacttggtgagca 1812
to top
>ref|XM_643295.1| Entamoeba histolytica HM-1:IMSS Signal recognition particle
           receptor alpha subunit (465.t00007) partial mRNA
          Length = 1467

 Score = 50.1 bits (25), Expect = 0.011
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 706 tcaacagcaccagatctgaaggtatcacatgctgccatcat 746
           ||||||||||||| |||||| |||||||| ||||| |||||
Sbjct: 980 tcaacagcaccagctctgaacgtatcacaagctgcaatcat 940
to top
>ref|XM_647593.1| Entamoeba histolytica HM-1:IMSS Signal recognition particle
           receptor alpha subunit (109.t00019) partial mRNA
          Length = 1467

 Score = 50.1 bits (25), Expect = 0.011
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 706 tcaacagcaccagatctgaaggtatcacatgctgccatcat 746
           ||||||||||||| |||||| |||||||| ||||| |||||
Sbjct: 980 tcaacagcaccagctctgaacgtatcacaagctgcaatcat 940
to top
>gb|AY786549.1| Caenorhabditis remanei signal recognition particle receptor alpha
           subunit mRNA, partial cds
          Length = 549

 Score = 46.1 bits (23), Expect = 0.17
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 533 ctctcatcagtggctcattatcctgcatacgaccagccgtatc 575
           |||||||||  || ||||||||||||||||| ||||| |||||
Sbjct: 352 ctctcatcaacggttcattatcctgcatacgtccagcagtatc 310
to top
>ref|NM_189333.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1092

 Score = 44.1 bits (22), Expect = 0.67
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 720 tctgaaggtatcacatgctgccatca 745
           |||||||||||||| |||||||||||
Sbjct: 603 tctgaaggtatcacctgctgccatca 578
to top
>emb|AJ549215.1|ZMA549215 Zea mays mRNA for chloroplast SRP receptor cpFtsY precursor (csr1
           gene)
          Length = 1699

 Score = 44.1 bits (22), Expect = 0.67
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 720 tctgaaggtatcacatgctgccatca 745
           |||||||||||||| |||||||||||
Sbjct: 643 tctgaaggtatcacctgctgccatca 618
to top
>emb|BX571838.9| Zebrafish DNA sequence from clone DKEY-205N7 in linkage group 13,
             complete sequence
          Length = 124398

 Score = 44.1 bits (22), Expect = 0.67
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 5     tattattgtatttattaattatttct 30
             ||||||| ||||||||||||||||||
Sbjct: 84782 tattattttatttattaattatttct 84757
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.67
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 720      tctgaaggtatcacatgctgccatca 745
                |||||||||||||| |||||||||||
Sbjct: 42228147 tctgaaggtatcacctgctgccatca 42228172
to top
>dbj|AP003238.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
           PAC clone:P0401G10
          Length = 160704

 Score = 44.1 bits (22), Expect = 0.67
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 720 tctgaaggtatcacatgctgccatca 745
           |||||||||||||| |||||||||||
Sbjct: 104 tctgaaggtatcacctgctgccatca 129
to top
>dbj|AP004326.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OJ1294_F06
          Length = 121088

 Score = 44.1 bits (22), Expect = 0.67
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 720    tctgaaggtatcacatgctgccatca 745
              |||||||||||||| |||||||||||
Sbjct: 101345 tctgaaggtatcacctgctgccatca 101370
to top
>dbj|AK109369.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-D11, full
           insert sequence
          Length = 1308

 Score = 44.1 bits (22), Expect = 0.67
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 720 tctgaaggtatcacatgctgccatca 745
           |||||||||||||| |||||||||||
Sbjct: 645 tctgaaggtatcacctgctgccatca 620
to top
>dbj|AK103090.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033118J07, full
           insert sequence
          Length = 1221

 Score = 44.1 bits (22), Expect = 0.67
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 720 tctgaaggtatcacatgctgccatca 745
           |||||||||||||| |||||||||||
Sbjct: 558 tctgaaggtatcacctgctgccatca 533
to top
>dbj|AK058574.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-E11, full
           insert sequence
          Length = 1344

 Score = 44.1 bits (22), Expect = 0.67
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 720 tctgaaggtatcacatgctgccatca 745
           |||||||||||||| |||||||||||
Sbjct: 666 tctgaaggtatcacctgctgccatca 641
to top
>gb|AE017245.1| Mycoplasma synoviae 53, complete genome
          Length = 799476

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 10     ttgtatttattaattatttct 30
              |||||||||||||||||||||
Sbjct: 434529 ttgtatttattaattatttct 434509
to top
>emb|BX323058.5| Human DNA sequence from clone RP11-12C4 on chromosome 1 Contains part
             of a novel gene, complete sequence
          Length = 26982

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 477   ctctcccacaaataagaccag 497
             |||||||||||||||||||||
Sbjct: 21395 ctctcccacaaataagaccag 21375
to top
>emb|BX571724.9| Zebrafish DNA sequence from clone CH211-165B19 in linkage group 9,
            complete sequence
          Length = 174709

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 3    catattattgtatttattaattatt 27
            |||||||||||||| ||||||||||
Sbjct: 5166 catattattgtattcattaattatt 5142
to top
>emb|BX537141.17| Zebrafish DNA sequence from clone DKEY-9E8 in linkage group 2, complete
             sequence
          Length = 264534

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 7     ttattgtatttattaattatt 27
             |||||||||||||||||||||
Sbjct: 74126 ttattgtatttattaattatt 74146
to top
>ref|XM_628342.1| Cryptosporidium parvum Iowa II SRP54. signal recognition 54.
           GTpase. (cgd7_1640), partial mRNA
          Length = 1548

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 700 agctgctcaacagcaccagatctgaaggtatca 732
           ||||| |||| |||||||| |||||||||||||
Sbjct: 488 agctgatcaaaagcaccagctctgaaggtatca 456
to top
>emb|BX601643.6| Zebrafish DNA sequence from clone DKEY-32B18 in linkage group 9,
             complete sequence
          Length = 165857

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 4     atattattgtatttattaatt 24
             |||||||||||||||||||||
Sbjct: 74429 atattattgtatttattaatt 74409
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 6       attattgtatttattaattat 26
               |||||||||||||||||||||
Sbjct: 8433206 attattgtatttattaattat 8433186
to top
>gb|AC015631.10|AC015631 Homo sapiens, clone RP11-45L5, complete sequence
          Length = 145138

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 7      ttattgtatttattaattatt 27
              |||||||||||||||||||||
Sbjct: 108039 ttattgtatttattaattatt 108019
to top
>dbj|AP005178.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0056I06
          Length = 138653

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 6     attattgtatttattaattat 26
             |||||||||||||||||||||
Sbjct: 64799 attattgtatttattaattat 64779
to top
>emb|CR762425.5| Zebrafish DNA sequence from clone CH211-181P1 in linkage group 18,
             complete sequence
          Length = 145468

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 7     ttattgtatttattaattatt 27
             |||||||||||||||||||||
Sbjct: 22729 ttattgtatttattaattatt 22749
to top
>emb|BX296566.5| Zebrafish DNA sequence from clone CH211-196F4 in linkage group 11,
             complete sequence
          Length = 128109

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 4     atattattgtatttattaattattt 28
             |||||||||| ||||||||||||||
Sbjct: 93576 atattattgtttttattaattattt 93552
to top
>emb|AL590449.1|CNS07EGG chromosome X of strain GB-M1 of Encephalitozoon cuniculi (Microspora)
          Length = 262797

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 466   ccaaccaatgcctctcccaca 486
             |||||||||||||||||||||
Sbjct: 18544 ccaaccaatgcctctcccaca 18564


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,008,854
Number of Sequences: 3902068
Number of extensions: 7008854
Number of successful extensions: 146504
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 146241
Number of HSP's gapped (non-prelim): 261
length of query: 766
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 743
effective length of database: 17,143,297,704
effective search space: 12737470194072
effective search space used: 12737470194072
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
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