>BIRC6_HUMAN (Q9NR09) Baculoviral IAP repeat-containing protein 6|
            (Ubiquitin-conjugating BIR-domain enzyme apollon)
          Length = 4829

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 5/147 (3%)
 Frame = -2

Query: 646  NEPGYKNTVNTPLGEKHSMAYNQTAFVLSCK-TMLYSLRKPPKHFETLVVHHFHERERAI 470
            NEPGY+ +  TP G + S  Y+      + K  ML  +R P   F+ ++  HF+ +   I
Sbjct: 4679 NEPGYERSRGTPSGTQSSREYDGNIRQATVKWAMLEQIRNPSPCFKEVIHKHFYLKRVEI 4738

Query: 469  LDACSAYASGIVVGSSVRDSAKYACDK----CFAGFKKSLDAHTELLAKELVKNRAQALE 302
            +  C  +         + D  +Y+ DK      +    +L  HT  L +EL+K       
Sbjct: 4739 MAQCEEW---------IADIQQYSSDKRVGRTMSHHAAALKRHTAQLREELLKLPCPE-G 4788

Query: 301  LKGDTPAADEIASTS*GSWASPDHCQI 221
            L  DT  A E+   + G+  +  H Q+
Sbjct: 4789 LDPDTDDAPEVCRATTGAEETLMHDQV 4815

>ORC1_HUMAN (Q13415) Origin recognition complex subunit 1 (Replication control|
           protein 1)
          Length = 861

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
 Frame = -3

Query: 492 STSGSEPSWTHAAHTRRALSSDHRSGIAPSTPATSALPVSRSL----SMHTPNFSQRS 331
           S S   PSWT A H  + + S H +  +  TP     P +R      ++  P  SQ++
Sbjct: 194 SKSAESPSWTPAEHVAKRIESRHSASKSRQTPTHPLTPRARKRLELGNLGNPQMSQQT 251

>ESR2_COTJA (O93511) Estrogen receptor beta (ER-beta)|
          Length = 472

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 29/108 (26%), Positives = 45/108 (41%), Gaps = 8/108 (7%)
 Frame = -2

Query: 487 ERERAILDACSAYASGIVVGSSVRDSAKYACDKCFAGFKKSLDAHTELLAK-----ELVK 323
           +R+      CS YASG   G        ++C+ C A FK+S+  H + +        + K
Sbjct: 99  KRDAHFCAVCSDYASGYHYGV-------WSCEGCKAFFKRSIQGHNDYICPATNQCTIDK 151

Query: 322 NR---AQALELKGDTPAADEIASTS*GSWASPDHCQIHLLMEYCNSEE 188
           NR    QA  L+       E+     GS    + C   +L  + NSE+
Sbjct: 152 NRRKSCQACRLR----KCYEVGMMKCGS--RRERCGYRILRRHRNSED 193

>ESR2_CHICK (Q9PTU5) Estrogen receptor beta (ER-beta) (cERb)|
          Length = 472

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 29/108 (26%), Positives = 45/108 (41%), Gaps = 8/108 (7%)
 Frame = -2

Query: 487 ERERAILDACSAYASGIVVGSSVRDSAKYACDKCFAGFKKSLDAHTELLAK-----ELVK 323
           +R+      CS YASG   G        ++C+ C A FK+S+  H + +        + K
Sbjct: 99  KRDAHFCAVCSDYASGYHYGV-------WSCEGCKAFFKRSIQGHNDYICPATNQCTIDK 151

Query: 322 NR---AQALELKGDTPAADEIASTS*GSWASPDHCQIHLLMEYCNSEE 188
           NR    QA  L+       E+     GS    + C   +L  + NSE+
Sbjct: 152 NRRKSCQACRLR----KCYEVGMMKCGS--RRERCGYRILRRHRNSED 193

>ESR1_MICUN (P57753) Estrogen receptor (ER) (Estradiol receptor) (ER-alpha)|
           (Fragment)
          Length = 525

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = -2

Query: 484 RERAILDACSAYASGIVVGSSVRDSAKYACDKCFAGFKKSLDAHTELL 341
           +E      CS YASG        D   ++C+ C A FK+S+  H + +
Sbjct: 78  KEMRFCAVCSDYASGY-------DYGVWSCEGCKAFFKRSIQGHNDYM 118

>TBX33_CAEEL (O45291) Putative T-box protein 33|
          Length = 507

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 19/48 (39%), Positives = 23/48 (47%)
 Frame = -3

Query: 531 SLLSILRPLSCTISTSGSEPSWTHAAHTRRALSSDHRSGIAPSTPATS 388
           SLL  LRP     S S + PS    A  +   +S   S  AP TP+TS
Sbjct: 394 SLLESLRPSMICTSVSTTAPSTNFHAPLQYPGTSSPSSNFAPMTPSTS 441

>ESR2_RAT (Q62986) Estrogen receptor beta (ER-beta)|
          Length = 530

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = -2

Query: 487 ERERAILDACSAYASGIVVGSSVRDSAKYACDKCFAGFKKSLDAHTELL 341
           +R+      CS YASG   G        ++C+ C A FK+S+  H + +
Sbjct: 143 KRDAHFCPVCSDYASGYHYGV-------WSCEGCKAFFKRSIQGHNDYI 184

>ESR2_CALJA (Q95171) Estrogen receptor beta (ER-beta)|
          Length = 530

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 29/109 (26%), Positives = 45/109 (41%), Gaps = 8/109 (7%)
 Frame = -2

Query: 487 ERERAILDACSAYASGIVVGSSVRDSAKYACDKCFAGFKKSLDAHTELLAK-----ELVK 323
           +R+      CS YASG   G        ++C+ C A FK+S+  H + +        + K
Sbjct: 143 KRDAHFCAVCSDYASGYHYGV-------WSCEGCKAFFKRSIQGHNDYICPATNQCTIDK 195

Query: 322 NR---AQALELKGDTPAADEIASTS*GSWASPDHCQIHLLMEYCNSEEK 185
           NR    QA  L+       E+     GS    + C   L+    N+EE+
Sbjct: 196 NRRKSCQACRLR----KCYEVGMVKCGS--RRERCGYRLVRRQGNAEEQ 238

>SIR2_ASHGO (Q757M7) NAD-dependent histone deacetylase SIR2 (EC 3.5.1.-)|
           (Regulatory protein SIR2) (Silent information regulator
           2)
          Length = 559

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
 Frame = +2

Query: 488 VEMVHDKGLKMLRRLTK*IQH--SLA**NKRSLIICHGMLFTKRCI 619
           ++M+ DKG K+LR  T+ I +  S A   K +++ CHG   T  C+
Sbjct: 315 IKMIQDKG-KLLRNYTQNIDNLESYAGIFKENIVQCHGSFATASCV 359

>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)|
            (High molecular weight salivary mucin MG1) (Sublingual
            gland mucin)
          Length = 5703

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
 Frame = -3

Query: 513  RPLSCTISTSGSEPSWTHAAHT-RRALSSDHRSGIAPSTPATSALPVSRSLSMHTPNFSQ 337
            RP+   ++T+ + P+ T +  T   AL + H     P  P T+A    RSLS  +P+  +
Sbjct: 2685 RPIPPVLTTTATTPAATSSTVTPSSALGTTH----TPPVPNTTATTHGRSLSPSSPHTVR 2740

Query: 336  RSW 328
             +W
Sbjct: 2741 TAW 2743

>FUMC_SYNY3 (Q55674) Fumarate hydratase class II (EC 4.2.1.2) (Fumarase C)|
          Length = 466

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 11/36 (30%), Positives = 22/36 (61%)
 Frame = -2

Query: 517 FETLVVHHFHERERAILDACSAYASGIVVGSSVRDS 410
           F+ +++H+F      + DAC+++   +VVG  V +S
Sbjct: 362 FKPVIIHNFLHSLHLLSDACASFRQHLVVGLQVNES 397


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 103,974,615
Number of Sequences: 219361
Number of extensions: 2290203
Number of successful extensions: 6287
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 6006
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6283
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6086476506
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)