Clone Name | rbasd27c10 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | FA24B_HUMAN (Q8N5W8) Protein FAM24B precursor | 28 | 6.5 | 2 | ATM_CRYNE (Q5KFE0) Serine/threonine-protein kinase TEL1 (EC 2.7.... | 28 | 8.5 |
---|
>FA24B_HUMAN (Q8N5W8) Protein FAM24B precursor| Length = 94 Score = 28.1 bits (61), Expect = 6.5 Identities = 12/38 (31%), Positives = 16/38 (42%) Frame = +2 Query: 56 NTTPALLCSAVCPAADPSRAHCTCLFFSSRPPCFCAWN 169 N+ + + CPA + C F S PPC C N Sbjct: 54 NSQAKTIATESCPALQCCEGYRMCASFDSLPPCCCDIN 91
>ATM_CRYNE (Q5KFE0) Serine/threonine-protein kinase TEL1 (EC 2.7.11.1)| (DNA-damage checkpoint kinase TEL1) (Telomere length regulation protein 1) (ATM homolog) Length = 2967 Score = 27.7 bits (60), Expect = 8.5 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = +2 Query: 29 LTLHTEXXYNTTPALLCSAVCPAADPS 109 +TL+T PALLCS V P P+ Sbjct: 204 VTLNTSSLVQIIPALLCSTVSPIVPPT 230 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 29,778,415 Number of Sequences: 219361 Number of extensions: 477095 Number of successful extensions: 1192 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1183 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1192 length of database: 80,573,946 effective HSP length: 45 effective length of database: 70,702,701 effective search space used: 1696864824 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)