>emb|AJ234439.1|HVU234439 Hordeum vulgare partial mRNA; clone cMWG0725
          Length = 383

 Score =  353 bits (178), Expect = 1e-94
 Identities = 199/202 (98%), Gaps = 3/202 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   tcctttagcatagatgggtgtgtgaaaattaactttacatacagagnagnagtataatac 60
           |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 200 tcctttagcatagatgggtgtgtgaaaattaactttacatacagag-ag-agtataatac 143

                                                                       
Query: 61  tacgcctgctctgctgtgctctgccgtgtgcccagcagcagacccaagcagggcacactg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 tacgcctgctctgctgtgctctgccgtgtgcccagcagcagacccaagcagggcacactg 83

                                                                       
Query: 121 tacgtgtttgttcttctcctcgcga-cccccttgcttttgtgcgtggaatttgctcagat 179
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 82  tacgtgtttgttcttctcctcgcgaccccccttgcttttgtgcgtggaatttgctcagat 23

                                 
Query: 180 tctggaggggatgaggggcgtg 201
           ||||||||||||||||||||||
Sbjct: 22  tctggaggggatgaggggcgtg 1

>emb|AL158086.32| Human DNA sequence from clone RP4-815O16 on chromosome 1p35.1-36.13
             Contains the C1QA gene for complement component 1( q
             subcomponent, alpha polypeptide), the C1QG gene for
             complement component 1 (q subcomponent, gamma
             polypeptide), the C1QB gene for complement component 1 (q
             subcomponent, beta polypeptide), the 5' end of the  EPHB2
             gene for EphB2 and a CpG island, complete sequence
          Length = 87320

 Score = 42.1 bits (21), Expect = 0.68
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 64    gcctgctctgctgtgctctgc 84
             |||||||||||||||||||||
Sbjct: 53126 gcctgctctgctgtgctctgc 53106

>dbj|AP001547.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-802F5, complete
              sequence
          Length = 144493

 Score = 42.1 bits (21), Expect = 0.68
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 64     gcctgctctgctgtgctctgc 84
              |||||||||||||||||||||
Sbjct: 115464 gcctgctctgctgtgctctgc 115484

>gb|AC107685.7| Mus musculus chromosome 19, clone RP24-376I6, complete sequence
          Length = 175566

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 64   gcctgctctgctgtgctctg 83
            ||||||||||||||||||||
Sbjct: 7163 gcctgctctgctgtgctctg 7144

>gb|AC148021.2| Mus musculus BAC clone RP23-9A7 from chromosome 19, complete sequence
          Length = 213178

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 64   gcctgctctgctgtgctctg 83
            ||||||||||||||||||||
Sbjct: 6242 gcctgctctgctgtgctctg 6261

>gb|AC104200.12| Mus musculus chromosome 13, clone RP24-512M2, complete sequence
          Length = 171912

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 108    gcagggcacactgtacgtgtttgttctt 135
              ||||| ||||||||| ||||||||||||
Sbjct: 106185 gcaggacacactgtaggtgtttgttctt 106158

>gb|DQ177463.1| Spirodela polyrrhiza serine-glyoxylate aminotransferase mRNA,
            complete cds
          Length = 1378

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 174  tcagattctggaggggatgagggg 197
            |||||| |||||||||||||||||
Sbjct: 1241 tcagatcctggaggggatgagggg 1218

>gb|AC140378.2| Mus musculus BAC clone RP24-84M18 from chromosome 19, complete sequence
          Length = 194681

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 64    gcctgctctgctgtgctctg 83
             ||||||||||||||||||||
Sbjct: 74034 gcctgctctgctgtgctctg 74015

>gb|AC124517.4| Mus musculus BAC clone RP23-387K15 from chromosome 13, complete
             sequence
          Length = 198825

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 65    cctgctctgctgtgctctgc 84
             ||||||||||||||||||||
Sbjct: 75886 cctgctctgctgtgctctgc 75905

>gb|AC124563.4| Mus musculus BAC clone RP23-206B15 from chromosome 6, complete sequence
          Length = 210092

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 180    tctggaggggatgaggggcgtgga 203
              ||||||||||||| ||||||||||
Sbjct: 114645 tctggaggggatggggggcgtgga 114622

>gb|AC160107.2| Mus musculus BAC clone RP24-252N17 from chromosome 13, complete
            sequence
          Length = 178725

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 65   cctgctctgctgtgctctgc 84
            ||||||||||||||||||||
Sbjct: 6551 cctgctctgctgtgctctgc 6532

>emb|BX928753.10| Zebrafish DNA sequence from clone DKEY-5J3 in linkage group 17, complete
              sequence
          Length = 159225

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 21     tgtgaaaattaactttacat 40
              ||||||||||||||||||||
Sbjct: 101036 tgtgaaaattaactttacat 101055

>emb|BX571872.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment
              14/17
          Length = 348498

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 25     aaaattaactttacatacag 44
              ||||||||||||||||||||
Sbjct: 280903 aaaattaactttacatacag 280922

>emb|AL355532.10| Human DNA sequence from clone RP11-487F5 on chromosome 6 Contains the
             3' part of the GRIK2 (glutamate receptor, ionotropic,
             kainate 2) gene, ESTs, STSs and GSSs, complete sequence
          Length = 181302

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 89    tgcccagcagcagacccaagcagg 112
             ||||||| ||||||||||||||||
Sbjct: 29784 tgcccagaagcagacccaagcagg 29807

>emb|BX927328.10| Zebrafish DNA sequence from clone CH211-10M4 in linkage group 17,
             complete sequence
          Length = 197949

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 21    tgtgaaaattaactttacat 40
             ||||||||||||||||||||
Sbjct: 30137 tgtgaaaattaactttacat 30156

>gb|AY053359.1| Spirodela polyrhiza serine-glyoxylate aminotransferase (SGAT) mRNA,
           partial cds
          Length = 320

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 174 tcagattctggaggggatgagggg 197
           |||||| |||||||||||||||||
Sbjct: 183 tcagatcctggaggggatgagggg 160

>gb|AC067738.17| Homo sapiens 3 BAC RP11-381H1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 82883

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 100   agacccaagcagggcacactgtac 123
             |||||||||||| |||||||||||
Sbjct: 20379 agacccaagcagtgcacactgtac 20356

>dbj|AP006198.1| Homo sapiens genomic DNA, chromosome 6, clone:RP11-410D4, complete
             sequence
          Length = 139671

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 89    tgcccagcagcagacccaagcagg 112
             ||||||| ||||||||||||||||
Sbjct: 66739 tgcccagaagcagacccaagcagg 66762

>dbj|AP002530.2| Homo sapiens genomic DNA, chromosome 6q21, anti-oncogene region, section
              3/4
          Length = 300000

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 89     tgcccagcagcagacccaagcagg 112
              ||||||| ||||||||||||||||
Sbjct: 152035 tgcccagaagcagacccaagcagg 152058

>dbj|AB042030.1| Homo sapiens genomic DNA, chromosome 6q21, BAC clone:610J6, complete
             sequence
          Length = 111927

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 89    tgcccagcagcagacccaagcagg 112
             ||||||| ||||||||||||||||
Sbjct: 87059 tgcccagaagcagacccaagcagg 87082


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,801,247
Number of Sequences: 3902068
Number of extensions: 1801247
Number of successful extensions: 128670
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 128623
Number of HSP's gapped (non-prelim): 45
length of query: 211
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 189
effective length of database: 17,147,199,772
effective search space: 3240820756908
effective search space used: 3240820756908
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)