ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd26n01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
16PGL_HUMAN (O95336) 6-phosphogluconolactonase (EC 3.1.1.31) (6PGL) 45 2e-04
26PGL_MOUSE (Q9CQ60) 6-phosphogluconolactonase (EC 3.1.1.31) (6PGL) 40 0.004
3PCQAP_HUMAN (Q96RN5) Positive cofactor 2 glutamine/Q-rich-associ... 30 4.3
46PGL_STRCO (Q9XAB7) 6-phosphogluconolactonase (EC 3.1.1.31) (6PGL) 30 5.7
5DMBT1_MOUSE (Q60997) Deleted in malignant brain tumors 1 protein... 29 9.7

>6PGL_HUMAN (O95336) 6-phosphogluconolactonase (EC 3.1.1.31) (6PGL)|
          Length = 258

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 24/67 (35%), Positives = 32/67 (47%)
 Frame = -2

Query: 614 SXXPPXXRIXFXLXVIXXASNIXILXTGXXKANXVHLXVSDSSDGPXALTSLPARMVQPT 435
           S  PP  R+   L V+  A  +  + TG  KA  +   + D  + P     LPA +VQP 
Sbjct: 178 SPKPPPQRVTLTLPVLNAARTVIFVATGEGKAAVLKRILEDQEENP-----LPAALVQPH 232

Query: 434 DGKLVWF 414
            GKL WF
Sbjct: 233 TGKLCWF 239



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>6PGL_MOUSE (Q9CQ60) 6-phosphogluconolactonase (EC 3.1.1.31) (6PGL)|
          Length = 257

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 23/67 (34%), Positives = 31/67 (46%)
 Frame = -2

Query: 614 SXXPPXXRIXFXLXVIXXASNIXILXTGXXKANXVHLXVSDSSDGPXALTSLPARMVQPT 435
           S  PP  R+   L V+  A +I  + TG  KA  +   + D         +LPA +VQP 
Sbjct: 178 SPKPPPQRVTLTLPVLNAAQSIIFVATGEGKAAVLKRILEDKEG------TLPAALVQPR 231

Query: 434 DGKLVWF 414
            G L WF
Sbjct: 232 TGALCWF 238



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>PCQAP_HUMAN (Q96RN5) Positive cofactor 2 glutamine/Q-rich-associated protein|
           (PC2 glutamine/Q-rich-associated protein) (TPA-inducible
           gene 1 protein) (TIG-1) (Activator-recruited cofactor
           105 kDa component) (ARC105) (CTG repeat protein 7a)
          Length = 788

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
 Frame = +1

Query: 112 SEATTPRINVVNAAQNHLRPPKPNVLPISWNEPSFGLTHEED*RRRSRANLLPA---YDS 282
           S+A   ++  ++  Q+H  PP+P   P++ N+PS      +     S+A  LP    Y  
Sbjct: 283 SQALPQQLQQMHHTQHHQPPPQPQQPPVAQNQPSQLPPQSQTQPLVSQAQALPGQMLYTQ 342

Query: 283 PP 288
           PP
Sbjct: 343 PP 344



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>6PGL_STRCO (Q9XAB7) 6-phosphogluconolactonase (EC 3.1.1.31) (6PGL)|
          Length = 261

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = -2

Query: 614 SXXPPXXRIXFXLXVIXXASNIXILXTGXXKANXVHLXVSDSSD 483
           S  PP  RI   L  I  A  + +L  G  KAN V + +S + +
Sbjct: 182 SPKPPPIRISLTLPAIRAAREVWLLAAGEDKANAVAMALSGAGE 225



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>DMBT1_MOUSE (Q60997) Deleted in malignant brain tumors 1 protein precursor|
           (CRP-ductin) (Vomeroglandin)
          Length = 2085

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 19/52 (36%), Positives = 21/52 (40%)
 Frame = -1

Query: 279 VICWKKVSSRSTPLVLFVC*SKGWFVPGNRKNVWFWRTEMVLCGIDDVYAGR 124
           VIC    SS  TP         GW+ PG   N  F+ TE    G D   A R
Sbjct: 283 VICSASQSSSPTP---------GWWNPGGTNNDVFYPTEQTTAGTDSGLAVR 325


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,510,961
Number of Sequences: 219361
Number of extensions: 1270860
Number of successful extensions: 2702
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2650
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2702
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5596027262
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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