ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd27b24
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CCD72_XENTR (Q28GR1) Coiled-coil domain-containing protein 72 37 0.026
2CCD72_MOUSE (Q8K003) Coiled-coil domain-containing protein 72 34 0.22
3CCD72_HUMAN (Q9Y2S6) Coiled-coil domain-containing protein 72 34 0.22
4GSTT2_DROME (Q9VG98) Glutathione S-transferase D2 (EC 2.5.1.18) ... 33 0.48
5GSTT5_DROME (Q9VG95) Glutathione S-transferase D5 (EC 2.5.1.18) ... 30 4.1

>CCD72_XENTR (Q28GR1) Coiled-coil domain-containing protein 72|
          Length = 64

 Score = 37.4 bits (85), Expect = 0.026
 Identities = 15/28 (53%), Positives = 22/28 (78%)
 Frame = -1

Query: 439 KQGGKAKPLKQAKVAEKDYDENDLAYLQ 356
           ++GGK KPLKQ K + KD DE+++A+ Q
Sbjct: 4   REGGKKKPLKQPKKSNKDMDEDEIAFKQ 31



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>CCD72_MOUSE (Q8K003) Coiled-coil domain-containing protein 72|
          Length = 64

 Score = 34.3 bits (77), Expect = 0.22
 Identities = 15/28 (53%), Positives = 19/28 (67%)
 Frame = -1

Query: 439 KQGGKAKPLKQAKVAEKDYDENDLAYLQ 356
           ++GGK KPLKQ K   K+ DE D A+ Q
Sbjct: 4   REGGKKKPLKQPKKQAKEMDEEDKAFKQ 31



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>CCD72_HUMAN (Q9Y2S6) Coiled-coil domain-containing protein 72|
          Length = 64

 Score = 34.3 bits (77), Expect = 0.22
 Identities = 15/28 (53%), Positives = 19/28 (67%)
 Frame = -1

Query: 439 KQGGKAKPLKQAKVAEKDYDENDLAYLQ 356
           ++GGK KPLKQ K   K+ DE D A+ Q
Sbjct: 4   REGGKKKPLKQPKKQAKEMDEEDKAFKQ 31



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>GSTT2_DROME (Q9VG98) Glutathione S-transferase D2 (EC 2.5.1.18) (DmGST21)|
          Length = 215

 Score = 33.1 bits (74), Expect = 0.48
 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
 Frame = +1

Query: 142 MLNTTEGSLLQPQIVKRDTDR*IDRLSFSGHYEWAGR-----LISSHSSSDQILPAHP 300
           +LNT EG  L+P+ VK +    I  L  +G   W  R     L+  +   D +LP  P
Sbjct: 30  LLNTMEGEQLKPEFVKLNPQHTIPTLVDNGFSIWESRAIAVYLVEKYGKDDYLLPNDP 87



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>GSTT5_DROME (Q9VG95) Glutathione S-transferase D5 (EC 2.5.1.18) (DmGST24)|
          Length = 216

 Score = 30.0 bits (66), Expect = 4.1
 Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
 Frame = +1

Query: 142 MLNTTEGSLLQPQIVKRDTDR*IDRLSFSGHYEWAGR-----LISSHSSSDQILPAHPSG 306
           +LNT E   L+P+ VK +    I  L  +G   W  R     L+  +   D + P  P  
Sbjct: 30  LLNTLEKDQLKPEFVKLNPQHTIPTLVDNGFSIWESRAIAVYLVEKYGKDDTLFPKDPKK 89

Query: 307 Q 309
           Q
Sbjct: 90  Q 90


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,708,433
Number of Sequences: 219361
Number of extensions: 870862
Number of successful extensions: 2720
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2418
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2705
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4027872870
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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