>ref|XM_848862.1| PREDICTED: Canis familiaris similar to FIP1-like 1 (LOC612980),
           mRNA
          Length = 2693

 Score = 48.1 bits (24), Expect = 0.042
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 469 catcataatcactgtcactatcactatc 496
           |||||| |||||||||||||||||||||
Sbjct: 760 catcatcatcactgtcactatcactatc 733

>gb|AC139886.3| Mus musculus BAC clone RP23-120M10 from chromosome 15, complete sequence
          Length = 211336

 Score = 48.1 bits (24), Expect = 0.042
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 371    catcttctttcttttgttctcctt 394
              ||||||||||||||||||||||||
Sbjct: 112664 catcttctttcttttgttctcctt 112641

>emb|CR859111.1| Pongo pygmaeus mRNA; cDNA DKFZp459F1128 (from clone DKFZp459F1128)
          Length = 2241

 Score = 48.1 bits (24), Expect = 0.042
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 469 catcataatcactgtcactatcactatc 496
           |||||| |||||||||||||||||||||
Sbjct: 421 catcatcatcactgtcactatcactatc 394

>gb|AC024257.25| Homo sapiens 12 BAC RP11-370I10 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 184125

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 598   tttcttctctctgaatattctctgttt 624
             ||||||||||||| |||||||||||||
Sbjct: 96745 tttcttctctctgcatattctctgttt 96719

>emb|CR352231.8| Zebrafish DNA sequence from clone CH211-216G8 in linkage group 16,
              complete sequence
          Length = 202686

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 97     tacaaattttaaaaacagagaaa 119
              |||||||||||||||||||||||
Sbjct: 175180 tacaaattttaaaaacagagaaa 175202

>emb|BX537338.9| Zebrafish DNA sequence from clone DKEY-258E8 in linkage group 16,
              complete sequence
          Length = 309004

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 97     tacaaattttaaaaacagagaaa 119
              |||||||||||||||||||||||
Sbjct: 188247 tacaaattttaaaaacagagaaa 188269

>emb|AL954832.12| Zebrafish DNA sequence from clone DKEY-15O4, complete sequence
          Length = 256126

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 97    tacaaattttaaaaacagagaaa 119
             |||||||||||||||||||||||
Sbjct: 35943 tacaaattttaaaaacagagaaa 35965

>gb|AC154316.3| Mus musculus BAC clone RP23-338D3 from chromosome 14, complete sequence
          Length = 210286

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 100   aaattttaaaaacagagaaatg 121
             ||||||||||||||||||||||
Sbjct: 14640 aaattttaaaaacagagaaatg 14619

>gb|CP000243.1| Escherichia coli UTI89, complete genome
          Length = 5065741

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 392     cttgaattcttgagcatatttt 413
               ||||||||||||||||||||||
Sbjct: 4989172 cttgaattcttgagcatatttt 4989193

>emb|AL606995.3|OSJN00131 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0085H11,
             complete sequence
          Length = 132394

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 564   atttcctctgtttcctctctct 585
             ||||||||||||||||||||||
Sbjct: 23990 atttcctctgtttcctctctct 23969

>gb|AC102802.2| Homo sapiens chromosome 8, clone RP11-237C9, complete sequence
          Length = 156578

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 563    aatttcctctgtttcctctctc 584
              ||||||||||||||||||||||
Sbjct: 115067 aatttcctctgtttcctctctc 115046

>gb|AC098677.2| Homo sapiens BAC clone RP11-416E16 from 4, complete sequence
          Length = 169063

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 46    tgcttctggaacagttacacaa 67
             ||||||||||||||||||||||
Sbjct: 81213 tgcttctggaacagttacacaa 81192

>gb|AC154701.2| Mus musculus BAC clone RP24-344N20 from chromosome 14, complete sequence
          Length = 169056

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 100    aaattttaaaaacagagaaatg 121
              ||||||||||||||||||||||
Sbjct: 139396 aaattttaaaaacagagaaatg 139375

>gb|AF222339.1|AF222339 Xenopus laevis chromatin assembly factor 1 p150 subunit mRNA,
           complete cds
          Length = 2691

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 432 tcatcatctgcggaactgttgc 453
           ||||||||||||||||||||||
Sbjct: 626 tcatcatctgcggaactgttgc 605

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 564      atttcctctgtttcctctctct 585
                ||||||||||||||||||||||
Sbjct: 16363424 atttcctctgtttcctctctct 16363403

>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome
          Length = 6413771

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 375     ttctttcttttgttctccttga 396
               ||||||||||||||||||||||
Sbjct: 3348605 ttctttcttttgttctccttga 3348584

>ref|XM_632878.1| Dictyostelium discoideum hypothetical protein (DDB0186717), partial
           mRNA
          Length = 2679

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 476 atcactgtcactatcactatc 496
           |||||||||||||||||||||
Sbjct: 888 atcactgtcactatcactatc 868

>ref|XM_639947.1| Dictyostelium discoideum hypothetical protein (DDB0167970), partial
            mRNA
          Length = 1983

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 476  atcactgtcactatcactatc 496
            |||||||||||||||||||||
Sbjct: 1860 atcactgtcactatcactatc 1840

>ref|XM_639282.1| Dictyostelium discoideum hypothetical protein (DDB0217428), partial
            mRNA
          Length = 1983

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 476  atcactgtcactatcactatc 496
            |||||||||||||||||||||
Sbjct: 1860 atcactgtcactatcactatc 1840

>ref|XM_630323.1| Dictyostelium discoideum hypothetical protein (DDB0189174), partial
           mRNA
          Length = 1179

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 91  ttccattacaaattttaaaaa 111
           |||||||||||||||||||||
Sbjct: 135 ttccattacaaattttaaaaa 115

>gb|AC079290.12| Mus musculus chromosome 18, clone RP23-330E13, complete sequence
          Length = 202255

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 566    ttcctctgtttcctctctctg 586
              |||||||||||||||||||||
Sbjct: 166240 ttcctctgtttcctctctctg 166220

>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome
          Length = 5928787

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 476     atcactgtcactatcactatctgca 500
               |||||| ||||||||||||||||||
Sbjct: 1694451 atcactatcactatcactatctgca 1694475

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 470      atcataatcactgtcactatcacta 494
                ||||| |||||||||||||||||||
Sbjct: 12751625 atcatcatcactgtcactatcacta 12751601

>gb|AC122398.2| Mus musculus BAC clone RP24-90M8 from chromosome 18, complete sequence
          Length = 215758

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 661   tctctaaacttgcttgttttg 681
             |||||||||||||||||||||
Sbjct: 42749 tctctaaacttgcttgttttg 42729

>ref|XM_546414.2| PREDICTED: Canis familiaris similar to surface glycoprotein, Ig
            superfamily member (LOC489296), mRNA
          Length = 4164

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 474  taatcactgtcactatcactatctg 498
            |||||||||||| ||||||||||||
Sbjct: 2730 taatcactgtcattatcactatctg 2706

>ref|XM_727781.1| Plasmodium chabaudi chabaudi hypothetical protein (PC403065.00.0)
           partial mRNA
          Length = 447

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 476 atcactgtcactatcactatc 496
           |||||||||||||||||||||
Sbjct: 343 atcactgtcactatcactatc 323

>emb|AL392083.17| Human DNA sequence from clone RP11-29A19 on chromosome 10 Contains the
             3' end of the gene for double-stranded RNA specific
             adenosine deaminase (ADAR3) (FLJ30545 FLJ25034 FLJ36975)
             and three CpG islands, complete sequence
          Length = 164741

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 551   gccacactgctgaatttcctc 571
             |||||||||||||||||||||
Sbjct: 32497 gccacactgctgaatttcctc 32477

>emb|BX248358.1| Corynebacterium diphtheriae gravis NCTC13129, complete genome; segment
              5/8
          Length = 348408

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 382    ttttgttctccttgaattcttgagc 406
              |||| ||||||||||||||||||||
Sbjct: 335995 tttttttctccttgaattcttgagc 336019

>gb|AC123982.10| Pan troglodytes clone rp43-39b11, complete sequence
          Length = 186239

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 465   ggaacatcataatcactgtca 485
             |||||||||||||||||||||
Sbjct: 30597 ggaacatcataatcactgtca 30617

>emb|BX323032.6| Zebrafish DNA sequence from clone DKEYP-7C3 in linkage group 2, complete
              sequence
          Length = 167106

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 698    ccaaccacttgcttctgaact 718
              |||||||||||||||||||||
Sbjct: 163938 ccaaccacttgcttctgaact 163958

>gb|AC011359.5|AC011359 Homo sapiens chromosome 5 clone CTC-370H24, complete sequence
          Length = 195887

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 413   tctgtactcaatcacctcatc 433
             |||||||||||||||||||||
Sbjct: 79067 tctgtactcaatcacctcatc 79047

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 470      atcataatcactgtcactatcacta 494
                ||||| |||||||||||||||||||
Sbjct: 12748388 atcatcatcactgtcactatcacta 12748364

>gb|AC116984.2| Dictyostelium discoideum chromosome 2 map 2567470-3108875 strain AX4,
              complete sequence
          Length = 541399

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 472    cataatcactgtcactatcactatc 496
              |||||||||| ||||||||||||||
Sbjct: 114553 cataatcactatcactatcactatc 114529



 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 476   atcactgtcactatcactatc 496
             |||||||||||||||||||||
Sbjct: 79898 atcactgtcactatcactatc 79918

>gb|AC121491.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0050D18,
              complete sequence
          Length = 126350

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 470    atcataatcactgtcactatcacta 494
              ||||| |||||||||||||||||||
Sbjct: 106078 atcatcatcactgtcactatcacta 106054

>gb|AC106803.3| Homo sapiens chromosome 5 clone RP11-478A7, complete sequence
          Length = 169122

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 29     aaatatgtagtaaattgtgct 49
              |||||||||||||||||||||
Sbjct: 110311 aaatatgtagtaaattgtgct 110291

>gb|AC005237.2|AC005237 Homo sapiens BAC clone RP11-556H17 from 2, complete sequence
          Length = 175179

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 95    attacaaattttaaaaacagagaaa 119
             |||| ||||||||||||||||||||
Sbjct: 58179 attaaaaattttaaaaacagagaaa 58155

>gb|AC025588.1|AC025588 Homo sapiens chromosome 19, BAC CIT-HSPC_360J11 (BC288669), complete
             sequence
          Length = 145122

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 465   ggaacatcataatcactgtca 485
             |||||||||||||||||||||
Sbjct: 64791 ggaacatcataatcactgtca 64811

>gb|AC105165.11| Mus musculus chromosome 18, clone RP24-302C24, complete sequence
          Length = 186431

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 566    ttcctctgtttcctctctctg 586
              |||||||||||||||||||||
Sbjct: 112437 ttcctctgtttcctctctctg 112457


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,277,694
Number of Sequences: 3902068
Number of extensions: 10277694
Number of successful extensions: 235659
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 235120
Number of HSP's gapped (non-prelim): 535
length of query: 742
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 719
effective length of database: 17,143,297,704
effective search space: 12326031049176
effective search space used: 12326031049176
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)