>YCY3_SCHPO (O74840) Hypothetical protein C1235.03 in chromosome III|
          Length = 399

 Score = 33.1 bits (74), Expect = 0.71
 Identities = 25/91 (27%), Positives = 41/91 (45%)
 Frame = -2

Query: 619 VRADVHQRQVHYRLDKKVARREGEVMSTQQKCPLPDKNGWLVEEVMTLEAPYSIPVGAEF 440
           ++   H    + +L  + A+      STQ K  L D++  LVE+   L A     +  E+
Sbjct: 191 IKETQHNEMGNIKLSSQTAKSNS---STQTKTCLNDQSSKLVEDDEALSAEDCNRLAEEY 247

Query: 439 VQAEVMQCPSIYWHGMAKELQESKEDHARGG 347
           ++   MQ     +   AKE + SK +H  GG
Sbjct: 248 LELRNMQ-----YSNSAKEYRRSKSNHLFGG 273

>SRY_APOAG (O55063) Sex-determining region Y protein (Testis-determining|
           factor) (Fragment)
          Length = 57

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -3

Query: 399 MAWLKSCKNRKKITQEVASKLSSRLKKIFGQLEKELVPAN*EPFF 265
           M W  SC  R+K+ Q+  S  ++ + K  G   K L  A   PFF
Sbjct: 6   MVW--SCGERRKLAQQNPSMQNTEISKQLGYRWKSLTEAEKRPFF 48

>SPRC_RABIT (P36233) SPARC precursor (Secreted protein acidic and rich in|
           cysteine) (Osteonectin) (ON) (Basement-membrane protein
           40) (BM-40) (Fragment)
          Length = 273

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 19/64 (29%), Positives = 32/64 (50%)
 Frame = -2

Query: 553 GEVMSTQQKCPLPDKNGWLVEEVMTLEAPYSIPVGAEFVQAEVMQCPSIYWHGMAKELQE 374
           G  ++  Q+  LPD+   + E V  +     +PVGA  VQ EV         G  +E++E
Sbjct: 13  GRALAAPQQEALPDETEVVEETVAEVAEVAEVPVGANPVQVEV---------GEFEEVEE 63

Query: 373 SKED 362
           ++E+
Sbjct: 64  TEEE 67


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 101,207,833
Number of Sequences: 219361
Number of extensions: 2235712
Number of successful extensions: 5933
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5933
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5938641176
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)