>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  127 bits (64), Expect = 5e-26
 Identities = 115/132 (87%)
 Strand = Plus / Minus

                                                                            
Query: 472      cttcaagtgtcatcacttcttcaacgagccatccattcttatcaggcaatgggcactttt 531
                ||||||| ||||||||||||||||| ||||||||||| ||||||||||| ||| | || |
Sbjct: 10895084 cttcaagcgtcatcacttcttcaacaagccatccatttttatcaggcaaaggggatttct 10895025

                                                                            
Query: 532      gttgggtgctcattacttccccctcacggcgtgccactttcttgtcaagcctgtaatgga 591
                |||||||||||||||||||||| ||| ||||||||| | ||||||| | | ||||||| |
Sbjct: 10895024 gttgggtgctcattacttccccttcatggcgtgccaatctcttgtcgaacttgtaatgaa 10894965

                            
Query: 592      cttgtctctggt 603
                 ||| |||||||
Sbjct: 10894964 tttgcctctggt 10894953



 Score =  103 bits (52), Expect = 7e-19
 Identities = 169/208 (81%)
 Strand = Plus / Minus

                                                                            
Query: 266      aaaaatggctcctaattagctggtacgagttccttctcaagttggccaaatatcttcttg 325
                ||||| ||| |||| || |||||||  | ||||||||| ||| ||||||| |||||||||
Sbjct: 10896677 aaaaagggcccctacttggctggtaacaattccttctcgagtaggccaaacatcttcttg 10896618

                                                                            
Query: 326      aggcgagaagacaacttcgatgccacctcttgcgtgatcttctttcgattcttgcagctc 385
                |||||||||||     | |||   |||||||| |  ||||||||||  ||||||||||||
Sbjct: 10896617 aggcgagaagatgcactggatagtacctcttgagcaatcttctttctgttcttgcagctc 10896558

                                                                            
Query: 386      tttagccatgccatgccaataaatacttggacactgcatgacttctgcttggacgaattc 445
                |||| |||||| || |||||| | ||||||||| |||||| |||  ||||||| ||  ||
Sbjct: 10896557 tttaaccatgcgatcccaatagacacttggacattgcatgccttgggcttggatgagatc 10896498

                                            
Query: 446      tgctccaactggtatcgaatatggagct 473
                |||||||| |||||||| ||||| ||||
Sbjct: 10896497 tgctccaattggtatcgcatatgcagct 10896470



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 388     tagccatgccatgccaataa 407
               ||||||||||||||||||||
Sbjct: 8049076 tagccatgccatgccaataa 8049057

>dbj|AP005413.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0055N24
          Length = 142702

 Score =  127 bits (64), Expect = 5e-26
 Identities = 115/132 (87%)
 Strand = Plus / Minus

                                                                          
Query: 472    cttcaagtgtcatcacttcttcaacgagccatccattcttatcaggcaatgggcactttt 531
              ||||||| ||||||||||||||||| ||||||||||| ||||||||||| ||| | || |
Sbjct: 121450 cttcaagcgtcatcacttcttcaacaagccatccatttttatcaggcaaaggggatttct 121391

                                                                          
Query: 532    gttgggtgctcattacttccccctcacggcgtgccactttcttgtcaagcctgtaatgga 591
              |||||||||||||||||||||| ||| ||||||||| | ||||||| | | ||||||| |
Sbjct: 121390 gttgggtgctcattacttccccttcatggcgtgccaatctcttgtcgaacttgtaatgaa 121331

                          
Query: 592    cttgtctctggt 603
               ||| |||||||
Sbjct: 121330 tttgcctctggt 121319



 Score =  103 bits (52), Expect = 7e-19
 Identities = 169/208 (81%)
 Strand = Plus / Minus

                                                                          
Query: 266    aaaaatggctcctaattagctggtacgagttccttctcaagttggccaaatatcttcttg 325
              ||||| ||| |||| || |||||||  | ||||||||| ||| ||||||| |||||||||
Sbjct: 123043 aaaaagggcccctacttggctggtaacaattccttctcgagtaggccaaacatcttcttg 122984

                                                                          
Query: 326    aggcgagaagacaacttcgatgccacctcttgcgtgatcttctttcgattcttgcagctc 385
              |||||||||||     | |||   |||||||| |  ||||||||||  ||||||||||||
Sbjct: 122983 aggcgagaagatgcactggatagtacctcttgagcaatcttctttctgttcttgcagctc 122924

                                                                          
Query: 386    tttagccatgccatgccaataaatacttggacactgcatgacttctgcttggacgaattc 445
              |||| |||||| || |||||| | ||||||||| |||||| |||  ||||||| ||  ||
Sbjct: 122923 tttaaccatgcgatcccaatagacacttggacattgcatgccttgggcttggatgagatc 122864

                                          
Query: 446    tgctccaactggtatcgaatatggagct 473
              |||||||| |||||||| ||||| ||||
Sbjct: 122863 tgctccaattggtatcgcatatgcagct 122836

>dbj|AK065437.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013023P15, full
            insert sequence
          Length = 4208

 Score =  127 bits (64), Expect = 5e-26
 Identities = 115/132 (87%)
 Strand = Plus / Minus

                                                                        
Query: 472  cttcaagtgtcatcacttcttcaacgagccatccattcttatcaggcaatgggcactttt 531
            ||||||| ||||||||||||||||| ||||||||||| ||||||||||| ||| | || |
Sbjct: 3498 cttcaagcgtcatcacttcttcaacaagccatccatttttatcaggcaaaggggatttct 3439

                                                                        
Query: 532  gttgggtgctcattacttccccctcacggcgtgccactttcttgtcaagcctgtaatgga 591
            |||||||||||||||||||||| ||| ||||||||| | ||||||| | | ||||||| |
Sbjct: 3438 gttgggtgctcattacttccccttcatggcgtgccaatctcttgtcgaacttgtaatgaa 3379

                        
Query: 592  cttgtctctggt 603
             ||| |||||||
Sbjct: 3378 tttgcctctggt 3367



 Score =  101 bits (51), Expect = 3e-18
 Identities = 165/203 (81%)
 Strand = Plus / Minus

                                                                        
Query: 266  aaaaatggctcctaattagctggtacgagttccttctcaagttggccaaatatcttcttg 325
            ||||| ||| |||| || |||||||  | ||||||||| ||| ||||||| |||||||||
Sbjct: 3730 aaaaagggcccctacttggctggtaacaattccttctcgagtaggccaaacatcttcttg 3671

                                                                        
Query: 326  aggcgagaagacaacttcgatgccacctcttgcgtgatcttctttcgattcttgcagctc 385
            |||||||||||     | |||   |||||||| |  ||||||||||  ||||||||||||
Sbjct: 3670 aggcgagaagatgcactggatagtacctcttgagcaatcttctttctgttcttgcagctc 3611

                                                                        
Query: 386  tttagccatgccatgccaataaatacttggacactgcatgacttctgcttggacgaattc 445
            |||| |||||| || |||||| | ||||||||| |||||| |||  ||||||| ||  ||
Sbjct: 3610 tttaaccatgcgatcccaatagacacttggacattgcatgccttgggcttggatgagatc 3551

                                   
Query: 446  tgctccaactggtatcgaatatg 468
            |||||||| |||||||| |||||
Sbjct: 3550 tgctccaattggtatcgcatatg 3528

>dbj|AK060808.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-G04, full
           insert sequence
          Length = 1602

 Score =  127 bits (64), Expect = 5e-26
 Identities = 115/132 (87%)
 Strand = Plus / Minus

                                                                       
Query: 472 cttcaagtgtcatcacttcttcaacgagccatccattcttatcaggcaatgggcactttt 531
           ||||||| ||||||||||||||||| ||||||||||| ||||||||||| ||| | || |
Sbjct: 867 cttcaagcgtcatcacttcttcaacaagccatccatttttatcaggcaaaggggatttct 808

                                                                       
Query: 532 gttgggtgctcattacttccccctcacggcgtgccactttcttgtcaagcctgtaatgga 591
           |||||||||||||||||||||| ||| ||||||||| | ||||||| | | ||||||| |
Sbjct: 807 gttgggtgctcattacttccccttcatggcgtgccaatctcttgtcgaacttgtaatgaa 748

                       
Query: 592 cttgtctctggt 603
            ||| |||||||
Sbjct: 747 tttgcctctggt 736



 Score =  101 bits (51), Expect = 3e-18
 Identities = 165/203 (81%)
 Strand = Plus / Minus

                                                                        
Query: 266  aaaaatggctcctaattagctggtacgagttccttctcaagttggccaaatatcttcttg 325
            ||||| ||| |||| || |||||||  | ||||||||| ||| ||||||| |||||||||
Sbjct: 1099 aaaaagggcccctacttggctggtaacaattccttctcgagtaggccaaacatcttcttg 1040

                                                                        
Query: 326  aggcgagaagacaacttcgatgccacctcttgcgtgatcttctttcgattcttgcagctc 385
            |||||||||||     | |||   |||||||| |  ||||||||||  ||||||||||||
Sbjct: 1039 aggcgagaagatgcactggatagtacctcttgagcaatcttctttctgttcttgcagctc 980

                                                                        
Query: 386  tttagccatgccatgccaataaatacttggacactgcatgacttctgcttggacgaattc 445
            |||| |||||| || |||||| | ||||||||| |||||| |||  ||||||| ||  ||
Sbjct: 979  tttaaccatgcgatcccaatagacacttggacattgcatgccttgggcttggatgagatc 920

                                   
Query: 446  tgctccaactggtatcgaatatg 468
            |||||||| |||||||| |||||
Sbjct: 919  tgctccaattggtatcgcatatg 897

>gb|AC166347.2| Mus musculus BAC clone RP24-87G12 from chromosome 6, complete sequence
          Length = 193181

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 85     aaagctgaatcctggactggg 105
              |||||||||||||||||||||
Sbjct: 157955 aaagctgaatcctggactggg 157935

>emb|AL662864.14| Human DNA sequence from clone RP11-493K23 on chromosome X Contains two
             novel genes, two novel genes similar to poly(A) binding
             protein cytoplasmic 1 (LOC340530, LOC340529) and two CpG
             islands, complete sequence
          Length = 120769

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 400   gccaataaatacttggacactgcat 424
             |||||||||| ||||||||||||||
Sbjct: 24486 gccaataaatgcttggacactgcat 24510

>emb|AL766848.1|SAG766848 Streptococcus agalactiae NEM316 complete genome, segment 6
          Length = 233050

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 209    accagaagatgttttctggcg 229
              |||||||||||||||||||||
Sbjct: 230838 accagaagatgttttctggcg 230818

>emb|BX649529.23| Zebrafish DNA sequence from clone DKEYP-74F1 in linkage group 17,
             complete sequence
          Length = 216647

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 416   acactgcatgacttctgcttg 436
             |||||||||||||||||||||
Sbjct: 76752 acactgcatgacttctgcttg 76772

>emb|BX248522.9| Zebrafish DNA sequence from clone CH211-113B2 in linkage group 14,
            complete sequence
          Length = 104379

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 250  gcaaaaacatgatgcaaaaaa 270
            |||||||||||||||||||||
Sbjct: 7928 gcaaaaacatgatgcaaaaaa 7908

>emb|AL135750.5|HSO20 Homo sapiens chromosome X sequence from BAC CEPHB20O20 region
             PHKA1-DXS227 map Xq13, complete sequence
          Length = 115637

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 400   gccaataaatacttggacactgcat 424
             |||||||||| ||||||||||||||
Sbjct: 27961 gccaataaatgcttggacactgcat 27985

>gb|AC141891.3| Mus musculus BAC clone RP23-378A8 from 6, complete sequence
          Length = 152261

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 85   aaagctgaatcctggactggg 105
            |||||||||||||||||||||
Sbjct: 2719 aaagctgaatcctggactggg 2739

>gb|AC161218.10| Mus musculus chromosome 7, clone RP24-161J8, complete sequence
          Length = 181156

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 254    aaacatgatgcaaaaaatgg 273
              ||||||||||||||||||||
Sbjct: 121920 aaacatgatgcaaaaaatgg 121939

>gb|AC101738.16| Mus musculus chromosome 1, clone RP23-472N5, complete sequence
          Length = 183026

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    gcaagtgatgaaaagaatgt 34
             ||||||||||||||||||||
Sbjct: 73197 gcaagtgatgaaaagaatgt 73178

>gb|DQ226742.1| Boechera divaricarpa isolate SLW-A-H09 mRNA sequence
          Length = 391

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 480 gtcatcacttcttcaacgagccatccattcttatcaggca 519
           ||||| || ||||| || ||||| ||||||||||||||||
Sbjct: 59  gtcatgacctcttcgacaagccacccattcttatcaggca 20

>gb|AC122020.3| Mus musculus BAC clone RP24-365G17 from chromosome 1, complete sequence
          Length = 165592

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 144   tggaatcatctatcctcact 163
             ||||||||||||||||||||
Sbjct: 42771 tggaatcatctatcctcact 42752

>gb|U97191.1| Caenorhabditis elegans cosmid F53F10, complete sequence
          Length = 22729

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 197   gatgaatgcatcaccagaag 216
             ||||||||||||||||||||
Sbjct: 17399 gatgaatgcatcaccagaag 17418

>emb|AL513131.1| Human DNA sequence from clone RP11-210H10 on chromosome 6 Contains a
             HSPC030 protein pseudogene and a novel gene, complete
             sequence
          Length = 108171

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 15    gcaagtgatgaaaagaatgt 34
             ||||||||||||||||||||
Sbjct: 23728 gcaagtgatgaaaagaatgt 23747

>emb|AL645527.20| Mouse DNA sequence from clone RP23-26L6 on chromosome 11 Contains the
              Vamp2 gene for vesicle-associated membrane 2, the Per1 gene
              for period homolog 1 (Drosophila), the Hes7 gene for hairy
              and enhancer of split 7 (Drosophila), the Aloxe3 gene for
              arachidonate lipoxygenase 3, the Alox12b gene for
              arachidonate 12-lipoxygenase 12R type, the Alox15b gene for
              arachidonate 15-lipoxygenase second type, the Gucy2e gene
              for guanylate cyclase 2e, a novel gene, the gene for
              LYST-interacting protein LIP8 (Lip8-pending), the gene for
              the likely ortholog of H. sapiens trafficking protein
              particle complex 1 (TRAPPC1)), the Kcnab3 gene for
              potassium voltage-gated channel shaker-related subfamily
              beta member 3, a novel gene, the 3' end of the Chd3 gene
              for chromodomain helicase DNA binding protein 3 and six CpG
              islands, complete sequence
          Length = 261224

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 587    atggacttgtctctggtgca 606
              ||||||||||||||||||||
Sbjct: 211925 atggacttgtctctggtgca 211944

>emb|AL157874.1|SPBC1718 S.pombe chromosome II cosmid c1718
          Length = 18991

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 361  gatcttctttcgattcttgc 380
            ||||||||||||||||||||
Sbjct: 8995 gatcttctttcgattcttgc 8976

>gb|AC164631.5| Mus musculus 6 BAC RP23-359M3 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 237469

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 407   aatacttggacactgcatgacttc 430
             ||||| ||||||||||||||||||
Sbjct: 33486 aatacctggacactgcatgacttc 33463

>ref|NM_001022371.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPBC1718.06),
           partial mRNA
          Length = 2712

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 361 gatcttctttcgattcttgc 380
           ||||||||||||||||||||
Sbjct: 706 gatcttctttcgattcttgc 687

>ref|NM_170847.3| Caenorhabditis elegans F53F10.2a (decarbaxylase) mRNA, complete cds
          Length = 2396

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 197  gatgaatgcatcaccagaag 216
            ||||||||||||||||||||
Sbjct: 1129 gatgaatgcatcaccagaag 1148

>ref|NM_170848.2| Caenorhabditis elegans F53F10.2b (decarbaxylase) mRNA, complete cds
          Length = 2107

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 197  gatgaatgcatcaccagaag 216
            ||||||||||||||||||||
Sbjct: 1307 gatgaatgcatcaccagaag 1326

>dbj|AK006913.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:1700067G03 product:unclassifiable, full
           insert sequence
          Length = 386

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 587 atggacttgtctctggtgca 606
           ||||||||||||||||||||
Sbjct: 271 atggacttgtctctggtgca 290

>gb|AC156394.6| Mus musculus 6 BAC RP24-314D22 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 171323

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 407   aatacttggacactgcatgacttc 430
             ||||| ||||||||||||||||||
Sbjct: 19007 aatacctggacactgcatgacttc 19030

>gb|AC016716.6| Homo sapiens BAC clone RP11-312I3 from 2, complete sequence
          Length = 214269

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 13   gtgcaagtgatgaaaagaat 32
            ||||||||||||||||||||
Sbjct: 5902 gtgcaagtgatgaaaagaat 5883

>dbj|AP003490.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0592E11
          Length = 153734

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 388   tagccatgccatgccaataa 407
             ||||||||||||||||||||
Sbjct: 72845 tagccatgccatgccaataa 72826

>emb|Y07891.1|SPMSP1 S.pombe MSP1 gene
          Length = 3219

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 361 gatcttctttcgattcttgc 380
           ||||||||||||||||||||
Sbjct: 948 gatcttctttcgattcttgc 929

>gb|U92882.1|MMU92882 Mus musculus slow skeletal muscle troponin T (Tnnt1) gene, complete
            cds
          Length = 11670

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 254  aaacatgatgcaaaaaatgg 273
            ||||||||||||||||||||
Sbjct: 9391 aaacatgatgcaaaaaatgg 9372

>gb|AE017198.1| Lactobacillus johnsonii NCC 533, complete genome
          Length = 1992676

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 9       ttgagtgcaagtgatgaaaagaat 32
               |||| |||||||||||||||||||
Sbjct: 1813364 ttgaatgcaagtgatgaaaagaat 1813341


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,821,086
Number of Sequences: 3902068
Number of extensions: 5821086
Number of successful extensions: 93492
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 93334
Number of HSP's gapped (non-prelim): 158
length of query: 635
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 612
effective length of database: 17,143,297,704
effective search space: 10491698194848
effective search space used: 10491698194848
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)