ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd27b18 |
|---|---|
| Clone Library Name | barley_pub |
>OPDA_HAEIN (P44573) Oligopeptidase A (EC 3.4.24.70)| Length = 681 Score = 133 bits (335), Expect(2) = 2e-40 Identities = 73/169 (43%), Positives = 97/169 (57%) Frame = -3 Query: 640 LLSIAKHYETDEPLPEEIYAKLVAAKNFRAGTFSLRQIRFASVDMELHTTYDPSGPVSVY 461 L I+ HYET EPLP+E +L+ AKNF+A F LRQ+ F D LH T+D + Sbjct: 516 LAFISGHYETGEPLPKEKLTQLLKAKNFQAAMFILRQLEFGIFDFRLHHTFDAEKTNQIL 575 Query: 460 DVDRRVAEKTQVLAPLPEDRFLCGFSHIFXXXXXXXXYSYKWAEVLSADAFSAFEDAGLD 281 D + V + V+ + R FSHIF YSY WAEVLSADA+S FE+ G+ Sbjct: 576 DTLKSVKSQVAVIKGVDWARAPHSFSHIFAGGYAAGYYSYLWAEVLSADAYSRFEEEGIF 635 Query: 280 NEKAIEETGRRFRETVLALGGGKSPLEVFVAFRGREPSPEPLLRHNGLL 134 N TG+ F + +L GG + P+E+F FRGREP + LLRH G++ Sbjct: 636 N----PITGKSFLDEILTRGGSEEPMELFKRFRGREPQLDALLRHKGIM 680 Score = 52.8 bits (125), Expect(2) = 2e-40 Identities = 21/31 (67%), Positives = 27/31 (87%) Frame = -2 Query: 737 DEAFVAGISGIEWDAVELPSQFMENWCYHKK 645 D + VAGI+G+ WDAVELPSQFMENWC+ ++ Sbjct: 484 DVSDVAGINGVPWDAVELPSQFMENWCWEEE 514
>OPDA_SALTY (P27237) Oligopeptidase A (EC 3.4.24.70)| Length = 680 Score = 132 bits (332), Expect(3) = 3e-40 Identities = 68/168 (40%), Positives = 98/168 (58%) Frame = -3 Query: 640 LLSIAKHYETDEPLPEEIYAKLVAAKNFRAGTFSLRQIRFASVDMELHTTYDPSGPVSVY 461 L I+ HYET EPLP+E+ K++AAKN++A F LRQ+ F D LH ++P + Sbjct: 515 LAFISGHYETGEPLPKELLDKMLAAKNYQAALFILRQLEFGLFDFRLHAEFNPQQGAKIL 574 Query: 460 DVDRRVAEKTQVLAPLPEDRFLCGFSHIFXXXXXXXXYSYKWAEVLSADAFSAFEDAGLD 281 + + ++ V+ RF FSHIF YSY WA+VL+ADA+S FE+ G+ Sbjct: 575 ETLFEIKKQVAVVPSPTWGRFPHAFSHIFAGGYAAGYYSYLWADVLAADAYSRFEEEGIF 634 Query: 280 NEKAIEETGRRFRETVLALGGGKSPLEVFVAFRGREPSPEPLLRHNGL 137 N ETG+ F + +L GG + P+E+F FRGREP + +L H G+ Sbjct: 635 N----RETGQSFLDNILTRGGSEEPMELFKRFRGREPQLDAMLEHYGI 678 Score = 52.0 bits (123), Expect(3) = 3e-40 Identities = 21/28 (75%), Positives = 25/28 (89%) Frame = -2 Query: 737 DEAFVAGISGIEWDAVELPSQFMENWCY 654 + A V+GISG+ WDAVELPSQFMENWC+ Sbjct: 483 ETAGVSGISGVPWDAVELPSQFMENWCW 510 Score = 21.9 bits (45), Expect(3) = 3e-40 Identities = 8/10 (80%), Positives = 8/10 (80%) Frame = -1 Query: 771 GHALQHMLTR 742 GH L HMLTR Sbjct: 472 GHGLHHMLTR 481
>OPDA_ECOLI (P27298) Oligopeptidase A (EC 3.4.24.70)| Length = 680 Score = 131 bits (329), Expect(3) = 6e-40 Identities = 68/168 (40%), Positives = 97/168 (57%) Frame = -3 Query: 640 LLSIAKHYETDEPLPEEIYAKLVAAKNFRAGTFSLRQIRFASVDMELHTTYDPSGPVSVY 461 L I+ HYET EPLP+E+ K++AAKN++A F LRQ+ F D LH + P + Sbjct: 515 LAFISGHYETGEPLPKELLDKMLAAKNYQAALFILRQLEFGLFDFRLHAEFRPDQGAKIL 574 Query: 460 DVDRRVAEKTQVLAPLPEDRFLCGFSHIFXXXXXXXXYSYKWAEVLSADAFSAFEDAGLD 281 + + + V+ RF FSHIF YSY WA+VL+ADAFS FE+ G+ Sbjct: 575 ETLAEIKKLVAVVPSPSWGRFPHAFSHIFAGGYAAGYYSYLWADVLAADAFSRFEEEGIF 634 Query: 280 NEKAIEETGRRFRETVLALGGGKSPLEVFVAFRGREPSPEPLLRHNGL 137 N ETG+ F + +L+ GG + P+++F FRGREP + +L H G+ Sbjct: 635 N----RETGQSFLDNILSRGGSEEPMDLFKRFRGREPQLDAMLEHYGI 678 Score = 52.0 bits (123), Expect(3) = 6e-40 Identities = 21/28 (75%), Positives = 25/28 (89%) Frame = -2 Query: 737 DEAFVAGISGIEWDAVELPSQFMENWCY 654 + A V+GISG+ WDAVELPSQFMENWC+ Sbjct: 483 ETAGVSGISGVPWDAVELPSQFMENWCW 510 Score = 21.9 bits (45), Expect(3) = 6e-40 Identities = 8/10 (80%), Positives = 8/10 (80%) Frame = -1 Query: 771 GHALQHMLTR 742 GH L HMLTR Sbjct: 472 GHGLHHMLTR 481
>NEUL_PIG (Q02038) Neurolysin, mitochondrial precursor (EC 3.4.24.16)| (Neurotensin endopeptidase) (Mitochondrial oligopeptidase M) (Microsomal endopeptidase) (MEP) (Soluble angiotensin-binding protein) (SABP) (Endopeptidase 24.16) Length = 704 Score = 70.5 bits (171), Expect(2) = 2e-14 Identities = 53/181 (29%), Positives = 81/181 (44%), Gaps = 3/181 (1%) Frame = -3 Query: 670 WKTGAITRNTLLSIAKHYETDEPLPEEIYAKLVAAKNFRAGTFSLRQIRFASVDMELHTT 491 W T ++ R ++KHY+ P+ +++ KLVA++ G +LRQI + VD LHT Sbjct: 537 WDTDSLRR-----LSKHYKDGSPITDDLLEKLVASRLVNTGLLTLRQIVLSKVDQSLHTN 591 Query: 490 YDPSGPVSVYDVDRRVAEKTQVL--APLPEDRFLCGFSHIFXXXXXXXXYSYKWAEVLSA 317 S+ T++L A P F H+ Y Y W+EV S Sbjct: 592 ------TSLDAASEYAKYCTEILGVAATPGTNMPATFGHL-AGGYDGQYYGYLWSEVFSM 644 Query: 316 DAF-SAFEDAGLDNEKAIEETGRRFRETVLALGGGKSPLEVFVAFRGREPSPEPLLRHNG 140 D F S F+ G+ N E G ++R +L GG +++ F REP+ + L G Sbjct: 645 DMFYSCFKKEGIMN----PEVGMKYRNLILKPGGSLDGMDMLQNFLKREPNQKAFLMSRG 700 Query: 139 L 137 L Sbjct: 701 L 701 Score = 28.5 bits (62), Expect(2) = 2e-14 Identities = 10/20 (50%), Positives = 15/20 (75%) Frame = -2 Query: 713 SGIEWDAVELPSQFMENWCY 654 + +E D VE+PSQ +ENW + Sbjct: 518 TNVETDFVEVPSQMLENWVW 537
>MEPD_HUMAN (P52888) Thimet oligopeptidase (EC 3.4.24.15) (Endopeptidase 24.15)| (MP78) Length = 688 Score = 75.9 bits (185), Expect = 1e-13 Identities = 55/185 (29%), Positives = 83/185 (44%), Gaps = 1/185 (0%) Frame = -3 Query: 688 SYLLSSWKTGAITRNTLLSIAKHYETDEPLPEEIYAKLVAAKNFRAGTFSLRQIRFASVD 509 S +L +W + LL +++HY T +P E+ KL+ ++ G F+LRQI A VD Sbjct: 504 SQMLENW---VWEQEPLLRMSRHYRTGSAVPRELLEKLIESRQANTGLFNLRQIVLAKVD 560 Query: 508 MELHTTYDPSGPVSVYDVDRRVAEKTQVLAPLPEDRFLCGFSHIFXXXXXXXXYSYKWAE 329 LHT D + P Y R+ ++ + P F H+ Y Y W+E Sbjct: 561 QALHTQTD-ADPAEEY---ARLCQEILGVPATPGTNMPATFGHL-AGGYDAQYYGYLWSE 615 Query: 328 VLSADAF-SAFEDAGLDNEKAIEETGRRFRETVLALGGGKSPLEVFVAFRGREPSPEPLL 152 V S D F + F+ G+ N K G +R +L GG + + F GR+P + L Sbjct: 616 VYSMDMFHTRFKQEGVLNSK----VGMDYRSCILRPGGSEDASAMLRRFLGRDPKQDAFL 671 Query: 151 RHNGL 137 GL Sbjct: 672 LSKGL 676
>PRTD_YEAST (P25375) Saccharolysin (EC 3.4.24.37) (Protease D) (Proteinase yscD)| (Oligopeptidase YSCD) Length = 712 Score = 75.5 bits (184), Expect = 2e-13 Identities = 53/186 (28%), Positives = 88/186 (47%), Gaps = 2/186 (1%) Frame = -3 Query: 688 SYLLSSWKTGAITRNTLLSIAKHYETDEPLPEEIYAKLVAAKNFRAGTFSLRQIRFASVD 509 S +L W +N L++++ HY+T E +PE + L+ K+ F+LRQ+ F D Sbjct: 534 SQMLEFWTWN---KNELINLSSHYKTGEKIPESLINSLIKTKHVNGALFTLRQLHFGLFD 590 Query: 508 MELHTTYDPSGPVSVYDVDRRVAEKTQVLAPLPE-DRFLCGFSHIFXXXXXXXXYSYKWA 332 M++HT D +S+ D ++ + +++ + F HI Y Y WA Sbjct: 591 MKVHTCKDLQN-LSICDTWNQLRQDISLISNGGTLSKGYDSFGHIMSDSYSAGYYGYLWA 649 Query: 331 EVLSADAF-SAFEDAGLDNEKAIEETGRRFRETVLALGGGKSPLEVFVAFRGREPSPEPL 155 EV + D + + F L+ + I+ +R+ VLA GG + F GREPS + Sbjct: 650 EVFATDMYHTKFAKDPLNAKNGIQ-----YRDIVLARGGLYDINDNLKEFLGREPSKDAF 704 Query: 154 LRHNGL 137 L+ GL Sbjct: 705 LKELGL 710 Score = 30.0 bits (66), Expect = 8.3 Identities = 11/24 (45%), Positives = 15/24 (62%) Frame = -2 Query: 719 GISGIEWDAVELPSQFMENWCYHK 648 G + WD VE PSQ +E W ++K Sbjct: 521 GPGSVPWDFVEAPSQMLEFWTWNK 544
>DCP_ECOLI (P24171) Peptidyl-dipeptidase dcp (EC 3.4.15.5) (Dipeptidyl| carboxypeptidase) Length = 680 Score = 70.9 bits (172), Expect(2) = 3e-13 Identities = 49/166 (29%), Positives = 77/166 (46%), Gaps = 2/166 (1%) Frame = -3 Query: 628 AKHYETDEPLPEEIYAKLVAAKNFRAGTFSLRQIRFASVDMELHTTYDPSGPVSVYDVDR 449 A+HY++ +P+E+ K+ A F G + A +DM H + V D + Sbjct: 518 ARHYQSGAAMPDELQQKMRNASLFNKGYEMSELLSAALLDMRWHCLEENEAMQDVDDFEL 577 Query: 448 R--VAEKTQVLAPLPEDRFLCGFSHIFXXXXXXXXYSYKWAEVLSADAFSAFEDAGLDNE 275 R VAE + A P R F+HIF Y+Y W ++L+ D + F + G Sbjct: 578 RALVAENMDLPAIPPRYRSSY-FAHIFGGGYAAGYYAYLWTQMLADDGYQWFVEQG---- 632 Query: 274 KAIEETGRRFRETVLALGGGKSPLEVFVAFRGREPSPEPLLRHNGL 137 E G RFRE +L+ G + ++ +RG+ P P+L+H GL Sbjct: 633 GLTRENGLRFREAILSRGNSEDLERLYRQWRGKAPKIMPMLQHRGL 678 Score = 23.9 bits (50), Expect(2) = 3e-13 Identities = 9/16 (56%), Positives = 10/16 (62%) Frame = -2 Query: 698 DAVELPSQFMENWCYH 651 D VE PSQ E+W H Sbjct: 495 DFVEFPSQINEHWATH 510
>MEPD_PIG (P47788) Thimet oligopeptidase (EC 3.4.24.15) (Endopeptidase 24.15)| Length = 686 Score = 74.3 bits (181), Expect = 4e-13 Identities = 55/185 (29%), Positives = 84/185 (45%), Gaps = 1/185 (0%) Frame = -3 Query: 688 SYLLSSWKTGAITRNTLLSIAKHYETDEPLPEEIYAKLVAAKNFRAGTFSLRQIRFASVD 509 S +L +W A LL +++HY T +P+E+ KL+ ++ G F+LRQI A VD Sbjct: 504 SQMLENWVWEA---EPLLRMSQHYRTGSAIPQELLEKLIKSRQANTGLFNLRQIVLAKVD 560 Query: 508 MELHTTYDPSGPVSVYDVDRRVAEKTQVLAPLPEDRFLCGFSHIFXXXXXXXXYSYKWAE 329 LH T + P Y R+ ++ + P F H+ Y Y W+E Sbjct: 561 QALH-TQTAADPAEEY---ARLCQEILGVPATPGTNMPATFGHL-AGGYDAQYYGYLWSE 615 Query: 328 VLSADAF-SAFEDAGLDNEKAIEETGRRFRETVLALGGGKSPLEVFVAFRGREPSPEPLL 152 V SAD F + F+ G+ + K G +R +L GG + + F GR+P + L Sbjct: 616 VYSADMFHTRFKQEGILSGK----VGMDYRSCILRPGGSEDASVMLKLFLGRDPKQDAFL 671 Query: 151 RHNGL 137 GL Sbjct: 672 LSKGL 676
>DCP_SALTY (P27236) Peptidyl-dipeptidase dcp (EC 3.4.15.5) (Dipeptidyl| carboxypeptidase) Length = 680 Score = 70.1 bits (170), Expect(2) = 4e-13 Identities = 43/165 (26%), Positives = 77/165 (46%), Gaps = 1/165 (0%) Frame = -3 Query: 628 AKHYETDEPLPEEIYAKLVAAKNFRAGTFSLRQIRFASVDMELHTTYDPSGPVSVYDVDR 449 A+H ++ E +P ++ ++ A F G + A +DM H + SV + ++ Sbjct: 518 ARHVDSGEKMPADLQERMRKASLFNKGYDMTELLGAALLDMRWHMLEESVAEQSVAEFEQ 577 Query: 448 RVAEKTQVLAPLPEDRFLCG-FSHIFXXXXXXXXYSYKWAEVLSADAFSAFEDAGLDNEK 272 + + P R+ F+HIF Y+Y W ++L+ D + F + G Sbjct: 578 QALAAEHLDLPAVPPRYRSSYFAHIFGGGYAAGYYAYLWTQMLADDGYQWFVEQG----G 633 Query: 271 AIEETGRRFRETVLALGGGKSPLEVFVAFRGREPSPEPLLRHNGL 137 E G+RFR+ +LA G ++ A+RG EP +P+L++ GL Sbjct: 634 LTRENGQRFRDAILARGNSTDLETLYSAWRGHEPHIDPMLQYRGL 678 Score = 24.3 bits (51), Expect(2) = 4e-13 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -2 Query: 698 DAVELPSQFMENWCYHKK 645 D VE PSQ E+W H + Sbjct: 495 DFVEFPSQINEHWASHPR 512
>NEUL_RAT (P42676) Neurolysin, mitochondrial precursor (EC 3.4.24.16)| (Neurotensin endopeptidase) (Mitochondrial oligopeptidase M) (Microsomal endopeptidase) (MEP) Length = 704 Score = 73.6 bits (179), Expect = 7e-13 Identities = 57/189 (30%), Positives = 87/189 (46%), Gaps = 5/189 (2%) Frame = -3 Query: 688 SYLLSSWKTGAITRNTLLSIAKHYETDEPLPEEIYAKLVAAKNFRAGTFSLRQIRFASVD 509 S +L +W ++L ++KHY+ P+ +E+ KLVA++ G +LRQI + VD Sbjct: 529 SQMLENWVWDV---DSLRKLSKHYKDGHPITDELLEKLVASRLVNTGLLTLRQIVLSKVD 585 Query: 508 MELHT--TYDPSGPVSVYDVDRRVAEKTQVL--APLPEDRFLCGFSHIFXXXXXXXXYSY 341 LHT T D + + Y T++L A P F H+ Y Y Sbjct: 586 QSLHTNATLDAASEYAKY--------CTEILGVAATPGTNMPATFGHL-AGGYDGQYYGY 636 Query: 340 KWAEVLSADAF-SAFEDAGLDNEKAIEETGRRFRETVLALGGGKSPLEVFVAFRGREPSP 164 W+EV S D F S F+ G+ N E G ++R +L GG +++ F REP+ Sbjct: 637 LWSEVFSMDMFHSCFKKEGIMN----PEVGMKYRNLILKPGGSLDGMDMLQNFLQREPNQ 692 Query: 163 EPLLRHNGL 137 + L GL Sbjct: 693 KAFLMSRGL 701
>MEPD_RAT (P24155) Thimet oligopeptidase (EC 3.4.24.15) (Endo-oligopeptidase A)| (Endopeptidase 24.15) (PZ-peptidase) (Soluble metallo-endopeptidase) Length = 686 Score = 73.2 bits (178), Expect = 9e-13 Identities = 54/185 (29%), Positives = 84/185 (45%), Gaps = 1/185 (0%) Frame = -3 Query: 688 SYLLSSWKTGAITRNTLLSIAKHYETDEPLPEEIYAKLVAAKNFRAGTFSLRQIRFASVD 509 S +L +W + L+ +++HY T PE++ KL+ ++ AG F+LRQI A VD Sbjct: 504 SQMLENW---VWEKEPLMRMSQHYRTGGEAPEDLLEKLIKSRQANAGLFNLRQIVLAKVD 560 Query: 508 MELHTTYDPSGPVSVYDVDRRVAEKTQVLAPLPEDRFLCGFSHIFXXXXXXXXYSYKWAE 329 LHT D P Y R+ ++ + P F H+ Y Y W+E Sbjct: 561 QVLHTQTDVD-PAEEY---ARLCQEILGVPATPGTNMPATFGHL-AGGYDAQYYGYLWSE 615 Query: 328 VLSADAF-SAFEDAGLDNEKAIEETGRRFRETVLALGGGKSPLEVFVAFRGREPSPEPLL 152 V S D F + F+ G+ + K G +R ++L GG + + F GR+P + L Sbjct: 616 VYSMDMFHTRFKQEGVLSPK----VGMDYRTSILRPGGSEDASTMLKQFLGRDPKQDAFL 671 Query: 151 RHNGL 137 GL Sbjct: 672 LSKGL 676
>NEUL_RABIT (P42675) Neurolysin, mitochondrial precursor (EC 3.4.24.16)| (Neurotensin endopeptidase) (Mitochondrial oligopeptidase M) (Microsomal endopeptidase) (MEP) Length = 704 Score = 70.5 bits (171), Expect = 6e-12 Identities = 54/187 (28%), Positives = 85/187 (45%), Gaps = 3/187 (1%) Frame = -3 Query: 688 SYLLSSWKTGAITRNTLLSIAKHYETDEPLPEEIYAKLVAAKNFRAGTFSLRQIRFASVD 509 S +L +W ++L ++KHY+ P+ +++ KLVA++ G +LRQI + VD Sbjct: 529 SQMLENWVWDI---DSLRRLSKHYKDGNPIADDLLEKLVASRLVNTGLLTLRQIVLSKVD 585 Query: 508 MELHT--TYDPSGPVSVYDVDRRVAEKTQVLAPLPEDRFLCGFSHIFXXXXXXXXYSYKW 335 LHT + D + + Y D +A P F H+ Y Y W Sbjct: 586 QSLHTNSSLDAASEYARYCTD------ILGVAATPGTNMPATFGHL-AGGYDGQYYGYLW 638 Query: 334 AEVLSADAF-SAFEDAGLDNEKAIEETGRRFRETVLALGGGKSPLEVFVAFRGREPSPEP 158 +EV S D F S F+ G+ N E G ++R +L GG +++ F REP+ + Sbjct: 639 SEVFSMDMFYSCFKKEGIMN----PEVGMKYRNLILRPGGSLDGMDMLQNFLQREPNQKA 694 Query: 157 LLRHNGL 137 L GL Sbjct: 695 FLMSRGL 701
>NEUL_HUMAN (Q9BYT8) Neurolysin, mitochondrial precursor (EC 3.4.24.16)| (Neurotensin endopeptidase) (Mitochondrial oligopeptidase M) (Microsomal endopeptidase) (MEP) Length = 704 Score = 70.1 bits (170), Expect = 7e-12 Identities = 53/187 (28%), Positives = 85/187 (45%), Gaps = 3/187 (1%) Frame = -3 Query: 688 SYLLSSWKTGAITRNTLLSIAKHYETDEPLPEEIYAKLVAAKNFRAGTFSLRQIRFASVD 509 S +L +W ++L ++KHY+ P+ +++ KLVA++ G +LRQI + VD Sbjct: 529 SQMLENWVWDV---DSLRRLSKHYKDGSPIADDLLEKLVASRLVNTGLLTLRQIVLSKVD 585 Query: 508 MELH--TTYDPSGPVSVYDVDRRVAEKTQVLAPLPEDRFLCGFSHIFXXXXXXXXYSYKW 335 LH T+ D + + Y + +A P F H+ Y Y W Sbjct: 586 QSLHTNTSLDAASEYAKY------CSEILGVAATPGTNMPATFGHL-AGGYDGQYYGYLW 638 Query: 334 AEVLSADAF-SAFEDAGLDNEKAIEETGRRFRETVLALGGGKSPLEVFVAFRGREPSPEP 158 +EV S D F S F+ G+ N E G ++R +L GG +++ F REP+ + Sbjct: 639 SEVFSMDMFYSCFKKEGIMN----PEVGMKYRNLILKPGGSLDGMDMLHNFLKREPNQKA 694 Query: 157 LLRHNGL 137 L GL Sbjct: 695 FLMSRGL 701
>PMIP_HUMAN (Q99797) Mitochondrial intermediate peptidase, mitochondrial| precursor (EC 3.4.24.59) (MIP) Length = 713 Score = 51.6 bits (122), Expect = 3e-06 Identities = 37/149 (24%), Positives = 61/149 (40%), Gaps = 7/149 (4%) Frame = -3 Query: 628 AKHYETDEPLPEEIYAKLVAAKNFRAGTFSLRQIRFASVDMELHTTYDPSGPVSVYDVDR 449 A+HY+T +PLP+ + ++L +K A Q+ +A++D H + S D+ + Sbjct: 544 ARHYQTGQPLPKNMVSRLCESKKVCAAADMQLQVFYATLDQIYHGKHPLRN--STTDILK 601 Query: 448 RVAEKTQVLAPLPEDRFLCGFSHI-------FXXXXXXXXYSYKWAEVLSADAFSAFEDA 290 EK L +P + FSH+ + S W E D F+ Sbjct: 602 ETQEKFYGLPYVPNTAWQLRFSHLVGYGARYYSYLMSRAVASMVWKECFLQDPFN----- 656 Query: 289 GLDNEKAIEETGRRFRETVLALGGGKSPL 203 G R+R +LA GGG+ P+ Sbjct: 657 --------RAAGERYRREMLAHGGGREPM 677
>PMIP_RAT (Q01992) Mitochondrial intermediate peptidase, mitochondrial| precursor (EC 3.4.24.59) (MIP) Length = 710 Score = 51.6 bits (122), Expect = 3e-06 Identities = 40/161 (24%), Positives = 65/161 (40%), Gaps = 7/161 (4%) Frame = -3 Query: 628 AKHYETDEPLPEEIYAKLVAAKNFRAGTFSLRQIRFASVDMELHTTYDPSGPVSVYDVDR 449 AKHY+T +PLP+ + ++L +K A Q+ +A++D H + S D+ Sbjct: 541 AKHYQTGQPLPKAMVSRLCESKKVCAAAEMQLQVFYAALDQIYHGQHPLK--KSTTDILM 598 Query: 448 RVAEKTQVLAPLPEDRFLCGFSHI-------FXXXXXXXXYSYKWAEVLSADAFSAFEDA 290 E+ L +P+ + FSH+ + S W E D F+ Sbjct: 599 ETQEQFYGLPYVPDTAWQLRFSHLVGYGAKYYSYLMSRAVASMVWKECFLQDPFN----- 653 Query: 289 GLDNEKAIEETGRRFRETVLALGGGKSPLEVFVAFRGREPS 167 G R+R +LA GGGK P+ + + PS Sbjct: 654 --------RAAGERYRREMLAHGGGKEPMLMIQGMLQKCPS 686
>PMIP_SCHPO (Q10415) Probable mitochondrial intermediate peptidase, mitochondrial| precursor (EC 3.4.24.59) (MIP) Length = 762 Score = 39.7 bits (91), Expect = 0.011 Identities = 43/165 (26%), Positives = 63/165 (38%), Gaps = 2/165 (1%) Frame = -3 Query: 628 AKHYETDEPLPEEIYAKLVAAKNFRAGTFSLRQIRFASVDMELHT--TYDPSGPVSVYDV 455 A++ T+ PLP ++ +N A QI A VD H+ DPS + D Sbjct: 593 ARYEGTEIPLPVQVLNHHNMVENSSAPLDLQSQICMAMVDQLFHSKVVLDPS--FNSIDE 650 Query: 454 DRRVAEKTQVLAPLPEDRFLCGFSHIFXXXXXXXXYSYKWAEVLSADAFSAFEDAGLDNE 275 V K P + FSH++ SY + VL++ FS Sbjct: 651 VTNVTRKFSGFESAPPAAWYLQFSHLYGYSATYY--SYIFDTVLASLIFSKL----FAGN 704 Query: 274 KAIEETGRRFRETVLALGGGKSPLEVFVAFRGREPSPEPLLRHNG 140 E G +FR+ +L GG +SP E E +P+L G Sbjct: 705 PLSREAGEKFRKAILRWGGSRSPWECVA-----EALEQPILATGG 744
>PMIP_SCHCO (P37932) Mitochondrial intermediate peptidase, mitochondrial| precursor (EC 3.4.24.59) (MIP) Length = 775 Score = 37.4 bits (85), Expect = 0.052 Identities = 32/125 (25%), Positives = 51/125 (40%), Gaps = 10/125 (8%) Frame = -3 Query: 532 QIRFASVDMELHTTYDPSGPVSVYDVDRRVA---EKTQVLAPLPEDRFLCGFSHIFXXXX 362 QI A++D H+ P+ +D R++A ++ ++ +P F F H+F Sbjct: 634 QIMLAALDQIYHS---PAALQPGFDSTRKLARLHDEKGLIPYVPGTSFQTQFGHLFGYGA 690 Query: 361 XXXX-------YSYKWAEVLSADAFSAFEDAGLDNEKAIEETGRRFRETVLALGGGKSPL 203 S W +V S+ S ETG R+++ VL GGGK P Sbjct: 691 TYYSYLFDRAIASRVWKDVFSSSPLS-------------RETGERYKQEVLRYGGGKDPW 737 Query: 202 EVFVA 188 E+ A Sbjct: 738 EMVSA 742
>PRIM_CHLPN (Q9Z6W4) DNA primase (EC 2.7.7.-)| Length = 590 Score = 33.5 bits (75), Expect = 0.75 Identities = 17/61 (27%), Positives = 29/61 (47%) Frame = +1 Query: 280 YPDQHLQMLRMHQLTVLQPTCNCSIQLHSHLQKCG*IHTGICPLAEEQEPGFFLQPFGQH 459 Y ++ L LR H + ++ + H HL++ G + CP E+ P F + P G H Sbjct: 2 YTEESLDNLR-HSIDIVDV-----LSEHIHLKRSGATYKACCPFHTEKTPSFIVNPAGAH 55 Query: 460 H 462 + Sbjct: 56 Y 56
>POLR_KYMVJ (P36304) RNA replicase polyprotein (EC 2.7.7.48)| Length = 1874 Score = 32.7 bits (73), Expect = 1.3 Identities = 18/47 (38%), Positives = 22/47 (46%) Frame = +3 Query: 81 LKVGAANEKEKEPYAATGSKPLCLSSGSGEGSRPRKATKTSSGDFPP 221 LK ++N P ++ GS P SS S P K T TSS PP Sbjct: 664 LKPESSNPNNPNPSSSAGSNPPPKSSSSDNPPAPNKPTPTSSSTTPP 710
>YDJ7_SCHPO (P87055) Hypothetical protein C57A10.07 in chromosome I| Length = 311 Score = 32.0 bits (71), Expect = 2.2 Identities = 25/85 (29%), Positives = 34/85 (40%) Frame = -3 Query: 646 NTLLSIAKHYETDEPLPEEIYAKLVAAKNFRAGTFSLRQIRFASVDMELHTTYDPSGPVS 467 N L S+A+ YE P++I K R + I+F DP G VS Sbjct: 182 NVLFSVARFYEVTSRYPQKITVVSFDFKRDRFLNLHRKAIKFPEHKFHF-VGIDPEGGVS 240 Query: 466 VYDVDRRVAEKTQVLAPLPEDRFLC 392 D R AE+ + P ED + C Sbjct: 241 --DATRE-AERKNAIIPFTEDPYAC 262
>NU6C_SYNY3 (P26523) NAD(P)H-quinone oxidoreductase chain 6 (EC 1.6.5.-)| (NAD(P)H dehydrogenase I, chain 6) (NDH-1, chain 6) Length = 198 Score = 30.4 bits (67), Expect = 6.4 Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%) Frame = -3 Query: 682 LLSSWK---TGAITRNTLLSIAKHYETDEPLPEEIYAKLV 572 L++ W+ TG NTL++I KH+ +D LP E+ + L+ Sbjct: 116 LITPWQINETGPFVENTLVTIGKHFFSDYLLPFELASVLL 155
>GLGA1_SYNY3 (P74521) Glycogen synthase 1 (EC 2.4.1.21) (Starch [bacterial| glycogen] synthase 1) Length = 477 Score = 30.0 bits (66), Expect = 8.3 Identities = 15/65 (23%), Positives = 26/65 (40%) Frame = +2 Query: 434 FFCNPSVNIIYRHWSTWIISCMQLHIYTCETYLTQTEGASTEILCSHKLSIDFLWKRFIG 613 FF N + + HW II C H ++ Q+ +T + H L+ W+ + Sbjct: 107 FFSNGAAEFAWNHWKPEIIHCHDWHTGMIPVWMHQSPDIAT-VFTIHNLAYQGPWRGLLE 165 Query: 614 FIMLC 628 + C Sbjct: 166 TMTWC 170
>NASF_BACSU (P42437) Uroporphyrin-III C-methyltransferase (EC 2.1.1.107)| (Urogen III methylase) (SUMT) (Uroporphyrinogen III methylase) (UROM) Length = 483 Score = 30.0 bits (66), Expect = 8.3 Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 8/45 (17%) Frame = +2 Query: 374 KNVAESTQESVLWQRSKNLGFFC--------NPSVNIIYRHWSTW 484 + +A S Q V + KNL + C +PSV +I W TW Sbjct: 162 EGLARSVQTLVFYMGVKNLSYICQQLISYGKSPSVPVIVIQWGTW 206
>P3A2_STRPU (Q04073) DNA-binding protein P3A2| Length = 459 Score = 30.0 bits (66), Expect = 8.3 Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 5/88 (5%) Frame = -3 Query: 673 SWKTGAITRNTLLSIAKHYETDEPLPEEIYAKLVAAKNFRAGTFSLRQIRFASVDMELHT 494 SW +T +++ KH+ D+ LPE I K + + SL +HT Sbjct: 224 SWTHALVT--IVINCYKHHGRDDLLPEFIEDKCKEIEASQNQVASLPTATLLPSHAVVHT 281 Query: 493 TYDPSGPVSVYDVD-----RRVAEKTQV 425 +P G VS+ VD +A+ TQV Sbjct: 282 INNPDGTVSLIQVDTGATVATLADVTQV 309 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 112,021,429 Number of Sequences: 219361 Number of extensions: 2422725 Number of successful extensions: 7592 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 7211 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7570 length of database: 80,573,946 effective HSP length: 110 effective length of database: 56,444,236 effective search space used: 8240858456 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
