ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd26m14 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK121382.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023127H21, full insert sequence Length = 895 Score = 337 bits (170), Expect = 3e-89 Identities = 209/222 (94%) Strand = Plus / Minus Query: 275 tgccttagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctc 334 |||| |||||||| |||||||||||||||||||||||||| || || ||||||||||||| Sbjct: 618 tgccctagtcagctgtccagctctgctccacgatctcacgaaccttgcggttgtactctc 559 Query: 335 gcttgttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggat 394 ||||||||||||| |||| |||||||||||| || ||||||||||||||||||||||||| Sbjct: 558 gcttgttctcactaaacagtctggcagcttctgagtttgctggagagttggggtttggat 499 Query: 395 cacacagcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccact 454 |||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct: 498 cacacagcaaagactgaattgaagtcaatatggcagcaacatcatatatagggctccact 439 Query: 455 ggttctgtagaatatccaagcagatgctcccatctgcataaa 496 |||||||||||||||||||||||||||| ||||||||||||| Sbjct: 438 ggttctgtagaatatccaagcagatgcttccatctgcataaa 397 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Minus Query: 229 tttcatggttgcttattgcaactttctggca 259 ||||| |||||||||||||| |||||||||| Sbjct: 678 tttcacggttgcttattgcatctttctggca 648
>dbj|AK070524.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023055G02, full insert sequence Length = 4109 Score = 337 bits (170), Expect = 3e-89 Identities = 209/222 (94%) Strand = Plus / Minus Query: 275 tgccttagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctc 334 |||| |||||||| |||||||||||||||||||||||||| || || ||||||||||||| Sbjct: 574 tgccctagtcagctgtccagctctgctccacgatctcacgaaccttgcggttgtactctc 515 Query: 335 gcttgttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggat 394 ||||||||||||| |||| |||||||||||| || ||||||||||||||||||||||||| Sbjct: 514 gcttgttctcactaaacagtctggcagcttctgagtttgctggagagttggggtttggat 455 Query: 395 cacacagcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccact 454 |||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct: 454 cacacagcaaagactgaattgaagtcaatatggcagcaacatcatatatagggctccact 395 Query: 455 ggttctgtagaatatccaagcagatgctcccatctgcataaa 496 |||||||||||||||||||||||||||| ||||||||||||| Sbjct: 394 ggttctgtagaatatccaagcagatgcttccatctgcataaa 353 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Minus Query: 229 tttcatggttgcttattgcaactttctggca 259 ||||| |||||||||||||| |||||||||| Sbjct: 634 tttcacggttgcttattgcatctttctggca 604
>ref|XM_476729.1| Oryza sativa (japonica cultivar-group), mRNA Length = 459 Score = 335 bits (169), Expect = 1e-88 Identities = 205/217 (94%) Strand = Plus / Minus Query: 280 tagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgcttg 339 |||||||| |||||||||||||||||||||||||| || || |||||||||||||||||| Sbjct: 458 tagtcagctgtccagctctgctccacgatctcacgaaccttgcggttgtactctcgcttg 399 Query: 340 ttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacac 399 |||||||| |||| |||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 398 ttctcactaaacagtctggcagcttctgagtttgctggagagttggggtttggatcacac 339 Query: 400 agcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttc 459 ||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 338 agcaaagactgaattgaagtcaatatggcagcaacatcatatatagggctccactggttc 279 Query: 460 tgtagaatatccaagcagatgctcccatctgcataaa 496 ||||||||||||||||||||||| ||||||||||||| Sbjct: 278 tgtagaatatccaagcagatgcttccatctgcataaa 242
>gb|AY103578.1| Zea mays PCO136701 mRNA sequence Length = 1179 Score = 236 bits (119), Expect = 8e-59 Identities = 191/215 (88%) Strand = Plus / Minus Query: 280 tagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgcttg 339 ||||| || ||||||||||||||||| ||||| |||||||| ||||||||||| |||||| Sbjct: 800 tagtcggctgtccagctctgctccacaatctcgcggactttgcggttgtactcccgcttg 741 Query: 340 ttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacac 399 ||||| ||||||| ||| || ||||| || ||||| || ||||| ||||||||||||||| Sbjct: 740 ttctcgctgaacagtcttgcggcttctgagtttgcaggggagttcgggtttggatcacac 681 Query: 400 agcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttc 459 |||| |||||| ||||||||||| || |||||||| ||||||||||| |||||||||||| Sbjct: 680 agcagggactggatagaagtcaagattgcagcaacatcatatataggactccactggttc 621 Query: 460 tgtagaatatccaagcagatgctcccatctgcata 494 ||||| ||||||||||||||||| ||||| ||||| Sbjct: 620 tgtaggatatccaagcagatgcttccatcagcata 586
>ref|XM_469945.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1025 Score = 228 bits (115), Expect = 2e-56 Identities = 193/219 (88%) Strand = Plus / Minus Query: 278 cttagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgct 337 ||||||| || ||||||||||||||||| ||||| |||||||| ||||||||||| |||| Sbjct: 641 cttagtcggccgtccagctctgctccacaatctcgcggactttgcggttgtactcgcgct 582 Query: 338 tgttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcac 397 ||||||| ||||||| |||||| ||||| || ||||| || ||||| ||||||||||||| Sbjct: 581 tgttctcgctgaacagtctggctgcttcggagtttgcaggggagtttgggtttggatcac 522 Query: 398 acagcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggt 457 | |||| |||||| ||||| |||||||| |||||||| ||||||||||||||||| || | Sbjct: 521 agagcagggactggatagaggtcaatatcgcagcaacatcatatatagggctccattgat 462 Query: 458 tctgtagaatatccaagcagatgctcccatctgcataaa 496 | ||||| |||||||||||||| || ||||||||||||| Sbjct: 461 tttgtaggatatccaagcagatacttccatctgcataaa 423
>dbj|AB079798.1| Oryza sativa (japonica cultivar-group) OsRad6 mRNA for Rad6, complete cds Length = 764 Score = 228 bits (115), Expect = 2e-56 Identities = 193/219 (88%) Strand = Plus / Minus Query: 278 cttagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgct 337 ||||||| || ||||||||||||||||| ||||| |||||||| ||||||||||| |||| Sbjct: 634 cttagtcggccgtccagctctgctccacaatctcgcggactttgcggttgtactcgcgct 575 Query: 338 tgttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcac 397 ||||||| ||||||| |||||| ||||| || ||||| || ||||| ||||||||||||| Sbjct: 574 tgttctcgctgaacagtctggctgcttcggagtttgcaggggagtttgggtttggatcac 515 Query: 398 acagcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggt 457 | |||| |||||| ||||| |||||||| |||||||| ||||||||||||||||| || | Sbjct: 514 agagcagggactggatagaggtcaatatcgcagcaacatcatatatagggctccattgat 455 Query: 458 tctgtagaatatccaagcagatgctcccatctgcataaa 496 | ||||| |||||||||||||| || ||||||||||||| Sbjct: 454 tttgtaggatatccaagcagatacttccatctgcataaa 416
>dbj|AK120251.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045G10, full insert sequence Length = 847 Score = 228 bits (115), Expect = 2e-56 Identities = 193/219 (88%) Strand = Plus / Minus Query: 278 cttagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgct 337 ||||||| || ||||||||||||||||| ||||| |||||||| ||||||||||| |||| Sbjct: 641 cttagtcggccgtccagctctgctccacaatctcgcggactttgcggttgtactcgcgct 582 Query: 338 tgttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcac 397 ||||||| ||||||| |||||| ||||| || ||||| || ||||| ||||||||||||| Sbjct: 581 tgttctcgctgaacagtctggctgcttcggagtttgcaggggagtttgggtttggatcac 522 Query: 398 acagcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggt 457 | |||| |||||| ||||| |||||||| |||||||| ||||||||||||||||| || | Sbjct: 521 agagcagggactggatagaggtcaatatcgcagcaacatcatatatagggctccattgat 462 Query: 458 tctgtagaatatccaagcagatgctcccatctgcataaa 496 | ||||| |||||||||||||| || ||||||||||||| Sbjct: 461 tttgtaggatatccaagcagatacttccatctgcataaa 423
>dbj|AK067703.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116J09, full insert sequence Length = 882 Score = 228 bits (115), Expect = 2e-56 Identities = 193/219 (88%) Strand = Plus / Minus Query: 278 cttagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgct 337 ||||||| || ||||||||||||||||| ||||| |||||||| ||||||||||| |||| Sbjct: 627 cttagtcggccgtccagctctgctccacaatctcgcggactttgcggttgtactcgcgct 568 Query: 338 tgttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcac 397 ||||||| ||||||| |||||| ||||| || ||||| || ||||| ||||||||||||| Sbjct: 567 tgttctcgctgaacagtctggctgcttcggagtttgcaggggagtttgggtttggatcac 508 Query: 398 acagcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggt 457 | |||| |||||| ||||| |||||||| |||||||| ||||||||||||||||| || | Sbjct: 507 agagcagggactggatagaggtcaatatcgcagcaacatcatatatagggctccattgat 448 Query: 458 tctgtagaatatccaagcagatgctcccatctgcataaa 496 | ||||| |||||||||||||| || ||||||||||||| Sbjct: 447 tttgtaggatatccaagcagatacttccatctgcataaa 409
>gb|BT016345.1| Zea mays clone Contig178 mRNA sequence Length = 965 Score = 220 bits (111), Expect = 5e-54 Identities = 189/215 (87%) Strand = Plus / Plus Query: 280 tagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgcttg 339 ||||| || ||||||||||||||||| ||||| |||||||| |||| | |||| |||||| Sbjct: 357 tagtcggctgtccagctctgctccacaatctcgcggactttgcggtggaactcccgcttg 416 Query: 340 ttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacac 399 ||||| ||||||| ||| || ||||| || ||||| || ||||| |||| |||||||||| Sbjct: 417 ttctcgctgaacagtcttgcggcttctgagtttgcaggggagttcgggtctggatcacac 476 Query: 400 agcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttc 459 |||| |||||||||||||||||| || |||||||| ||||||||||| |||||||||||| Sbjct: 477 agcagggactgaatagaagtcaagattgcagcaacatcatatataggactccactggttc 536 Query: 460 tgtagaatatccaagcagatgctcccatctgcata 494 ||||| ||||||||||||||||| ||||| ||||| Sbjct: 537 tgtaggatatccaagcagatgcttccatcagcata 571
>gb|M62720.1|WHTUCP1A Wheat ubiquitin carrier protein (UBC1) mRNA, complete cds Length = 773 Score = 208 bits (105), Expect = 2e-50 Identities = 189/217 (87%) Strand = Plus / Minus Query: 280 tagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgcttg 339 ||||| || ||||||||||||||||||| |||||| || || ||||||||||| |||||| Sbjct: 574 tagtccgctgtccagctctgctccacgacctcacgaaccttgcggttgtactcgcgcttg 515 Query: 340 ttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacac 399 ||||| ||| |||||||||| ||||| || || || ||||| || ||||| || || ||| Sbjct: 514 ttctcgctgtacattctggctgcttcagagttcgcaggagaattcgggttcgggtcgcac 455 Query: 400 agcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttc 459 |||| |||||| ||||| |||||||| || ||||| |||||||||||||||||||||||| Sbjct: 454 agcagggactggatagaggtcaatattgctgcaacatcatatatagggctccactggttc 395 Query: 460 tgtagaatatccaagcagatgctcccatctgcataaa 496 ||||| || |||||||||||||| ||||||||||||| Sbjct: 394 tgtaggatgtccaagcagatgcttccatctgcataaa 358
>gb|BT017437.1| Zea mays clone EL01N0404C11.c mRNA sequence Length = 425 Score = 192 bits (97), Expect = 1e-45 Identities = 154/173 (89%) Strand = Plus / Minus Query: 289 gtccagctctgctccacgatctcacggactttacggttgtactctcgcttgttctcactg 348 |||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||| ||| Sbjct: 181 gtccagctctgctccacgatctcacggactttgcgggtgtactcccgcttgttctcgctg 122 Query: 349 aacattctggcagcttccgaatttgctggagagttggggtttggatcacacagcaaggac 408 |||| ||| || ||||| || ||||| || ||||| ||||||||||||||||||| |||| Sbjct: 121 aacagtcttgctgcttctgagtttgcaggggagtttgggtttggatcacacagcagggac 62 Query: 409 tgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttctg 461 || |||||||| || || |||||||| ||||||||||| |||||||||||||| Sbjct: 61 tggatagaagttaaaattgcagcaacatcatatataggactccactggttctg 9
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 190 bits (96), Expect = 4e-45 Identities = 126/136 (92%) Strand = Plus / Plus Query: 275 tgccttagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctc 334 |||| |||||||| |||||||||||||||||||||||||| || || ||||||||||||| Sbjct: 3621794 tgccctagtcagctgtccagctctgctccacgatctcacgaaccttgcggttgtactctc 3621853 Query: 335 gcttgttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggat 394 ||||||||||||| |||| |||||||||||| || ||||||||||||||||||||||||| Sbjct: 3621854 gcttgttctcactaaacagtctggcagcttctgagtttgctggagagttggggtttggat 3621913 Query: 395 cacacagcaaggactg 410 |||||||||| ||||| Sbjct: 3621914 cacacagcaaagactg 3621929 Score = 163 bits (82), Expect = 1e-36 Identities = 91/94 (96%) Strand = Plus / Plus Query: 408 ctgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttctgtagaat 467 |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 3622572 ctgaattgaagtcaatatggcagcaacatcatatatagggctccactggttctgtagaat 3622631 Query: 468 atccaagcagatgctcccatctgcataaactgca 501 ||||||||||||||| |||||||||||||||||| Sbjct: 3622632 atccaagcagatgcttccatctgcataaactgca 3622665 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 229 tttcatggttgcttattgcaactttctggca 259 ||||| |||||||||||||| |||||||||| Sbjct: 3621734 tttcacggttgcttattgcatctttctggca 3621764
>dbj|AP003842.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1641_C04 Length = 134367 Score = 190 bits (96), Expect = 4e-45 Identities = 126/136 (92%) Strand = Plus / Plus Query: 275 tgccttagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctc 334 |||| |||||||| |||||||||||||||||||||||||| || || ||||||||||||| Sbjct: 91111 tgccctagtcagctgtccagctctgctccacgatctcacgaaccttgcggttgtactctc 91170 Query: 335 gcttgttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggat 394 ||||||||||||| |||| |||||||||||| || ||||||||||||||||||||||||| Sbjct: 91171 gcttgttctcactaaacagtctggcagcttctgagtttgctggagagttggggtttggat 91230 Query: 395 cacacagcaaggactg 410 |||||||||| ||||| Sbjct: 91231 cacacagcaaagactg 91246 Score = 163 bits (82), Expect = 1e-36 Identities = 91/94 (96%) Strand = Plus / Plus Query: 408 ctgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttctgtagaat 467 |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 91889 ctgaattgaagtcaatatggcagcaacatcatatatagggctccactggttctgtagaat 91948 Query: 468 atccaagcagatgctcccatctgcataaactgca 501 ||||||||||||||| |||||||||||||||||| Sbjct: 91949 atccaagcagatgcttccatctgcataaactgca 91982 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 229 tttcatggttgcttattgcaactttctggca 259 ||||| |||||||||||||| |||||||||| Sbjct: 91051 tttcacggttgcttattgcatctttctggca 91081
>dbj|AP004267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0039H02 Length = 169162 Score = 190 bits (96), Expect = 4e-45 Identities = 126/136 (92%) Strand = Plus / Plus Query: 275 tgccttagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctc 334 |||| |||||||| |||||||||||||||||||||||||| || || ||||||||||||| Sbjct: 159744 tgccctagtcagctgtccagctctgctccacgatctcacgaaccttgcggttgtactctc 159803 Query: 335 gcttgttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggat 394 ||||||||||||| |||| |||||||||||| || ||||||||||||||||||||||||| Sbjct: 159804 gcttgttctcactaaacagtctggcagcttctgagtttgctggagagttggggtttggat 159863 Query: 395 cacacagcaaggactg 410 |||||||||| ||||| Sbjct: 159864 cacacagcaaagactg 159879 Score = 163 bits (82), Expect = 1e-36 Identities = 91/94 (96%) Strand = Plus / Plus Query: 408 ctgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttctgtagaat 467 |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 160522 ctgaattgaagtcaatatggcagcaacatcatatatagggctccactggttctgtagaat 160581 Query: 468 atccaagcagatgctcccatctgcataaactgca 501 ||||||||||||||| |||||||||||||||||| Sbjct: 160582 atccaagcagatgcttccatctgcataaactgca 160615 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 229 tttcatggttgcttattgcaactttctggca 259 ||||| |||||||||||||| |||||||||| Sbjct: 159684 tttcacggttgcttattgcatctttctggca 159714
>gb|BT017249.1| Zea mays clone EL01N0307D01.c mRNA sequence Length = 863 Score = 182 bits (92), Expect = 1e-42 Identities = 179/208 (86%) Strand = Plus / Minus Query: 289 gtccagctctgctccacgatctcacggactttacggttgtactctcgcttgttctcactg 348 ||||||||||||||||| | ||| || ||||| ||||||||||| ||||||||||| ||| Sbjct: 622 gtccagctctgctccacaacctcgcgaactttgcggttgtactcgcgcttgttctcgctg 563 Query: 349 aacattctggcagcttccgaatttgctggagagttggggtttggatcacacagcaaggac 408 |||||||| || ||||| || || || ||||| || |||||||| |||||||||| |||| Sbjct: 562 aacattctcgctgcttcagagttggcaggagaatttgggtttgggtcacacagcagggac 503 Query: 409 tgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttctgtagaata 468 |||||||| |||||||| || ||||| || |||||||| ||||||||||| ||||| || Sbjct: 502 tgaatagaggtcaatattgccgcaacatcgtatataggactccactggttttgtaggatg 443 Query: 469 tccaagcagatgctcccatctgcataaa 496 ||||| |||||||| ||||| ||||||| Sbjct: 442 tccaaacagatgcttccatccgcataaa 415
>gb|BT013884.1| Lycopersicon esculentum clone 132865R, mRNA sequence Length = 794 Score = 151 bits (76), Expect = 4e-33 Identities = 175/208 (84%) Strand = Plus / Minus Query: 289 gtccagctctgctccacgatctcacggactttacggttgtactctcgcttgttctcactg 348 |||||||||||||| || |||||||| || || | ||||||||| ||||||||||||||| Sbjct: 509 gtccagctctgctcaacaatctcacgcaccttcctgttgtactcacgcttgttctcactg 450 Query: 349 aacattctggcagcttccgaatttgctggagagttggggtttggatcacacagcaaggac 408 ||||| | || ||||| ||||| || || ||||| |||||||||||||| ||||| ||| Sbjct: 449 aacatgcgagctgcttctgaattagcaggcgagtttgggtttggatcacaaagcaaagac 390 Query: 409 tgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttctgtagaata 468 || || ||||| | ||| |||||||||||||||||||| |||||||| || || || || Sbjct: 389 tggattgaagtgagtatagcagcaacgtcatatataggactccactgattttgcagtatg 330 Query: 469 tccaagcagatgctcccatctgcataaa 496 || ||||| || |||||||| ||||||| Sbjct: 329 tctaagcaaatactcccatcggcataaa 302
>gb|AY660750.1| Populus tomentosa ubiquitin carrier protein mRNA, complete cds Length = 700 Score = 151 bits (76), Expect = 4e-33 Identities = 184/220 (83%) Strand = Plus / Minus Query: 277 ccttagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgc 336 ||||||||||||||||||||||||||||| || ||||| ||| | || ||||| || ||| Sbjct: 655 ccttagtcagcagtccagctctgctccacaatttcacgaactctgcgattgtattcccgc 596 Query: 337 ttgttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatca 396 || |||||||||||||| | || ||||| || |||||||| || || |||||||||||| Sbjct: 595 ttattctcactgaacatgcgagcggcttcagagtttgctggggaatttgggtttggatca 536 Query: 397 cacagcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactgg 456 || |||| |||||| || ||||| | ||| |||||||| |||||||| || |||||||| Sbjct: 535 cagagcagggactggatggaagttagtatagcagcaacatcatatatgggactccactga 476 Query: 457 ttctgtagaatatccaagcagatgctcccatctgcataaa 496 || |||| ||| || ||||| || || ||||||||||||| Sbjct: 475 ttttgtaaaatgtctaagcatatacttccatctgcataaa 436
>dbj|AK111549.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013057C14, full insert sequence Length = 2920 Score = 149 bits (75), Expect = 1e-32 Identities = 177/211 (83%) Strand = Plus / Minus Query: 289 gtccagctctgctccacgatctcacggactttacggttgtactctcgcttgttctcactg 348 ||||||||||||||||| |||||||| ||||| |||||||| || ||||||||||||||| Sbjct: 2655 gtccagctctgctccactatctcacgaacttttcggttgtattcccgcttgttctcactg 2596 Query: 349 aacattctggcagcttccgaatttgctggagagttggggtttggatcacacagcaaggac 408 || | | ||||||||| || || || || || || ||||||||||| || |||| ||| Sbjct: 2595 aataggcgggcagcttcagagttggcaggtgaatttgggtttggatcgcaaagcagcgac 2536 Query: 409 tgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttctgtagaata 468 || || || || | ||| ||||| || |||||||| |||||||||||||| ||||| ||| Sbjct: 2535 tggatggatgtgagtatagcagctacatcatatatggggctccactggttttgtagtata 2476 Query: 469 tccaagcagatgctcccatctgcataaactg 499 || ||||| ||||||||||| |||||||||| Sbjct: 2475 tctaagcatatgctcccatcagcataaactg 2445
>gb|AY389584.1| Hyacinthus orientalis ubiquitin-conjugating enzyme (UBC) mRNA, partial cds Length = 691 Score = 145 bits (73), Expect = 2e-31 Identities = 181/217 (83%) Strand = Plus / Minus Query: 278 cttagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgct 337 |||||||||| ||||||||||| ||||| ||||| ||||| | ||||||||||| |||| Sbjct: 450 cttagtcagccgtccagctctgttccactatctctcggacccttcggttgtactcacgct 391 Query: 338 tgttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcac 397 ||||||| |||||||| | ||||| || || || || || ||||| |||||||| |||| Sbjct: 390 tgttctcgctgaacatccgagcagcctcagagttggccggggagtttgggtttgggtcac 331 Query: 398 acagcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggt 457 | || | ||||||||||| |||| ||| || ||||| ||||| || || ||||| |||| Sbjct: 330 agaggagagactgaatagatgtcagtatagctgcaacatcataaatgggactccattggt 271 Query: 458 tctgtagaatatccaagcagatgctcccatctgcata 494 |||||| |||||||| ||| ||||||||||||||||| Sbjct: 270 tctgtaaaatatccaggcatatgctcccatctgcata 234
>dbj|AK112003.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-F01, full insert sequence Length = 947 Score = 143 bits (72), Expect = 9e-31 Identities = 174/208 (83%) Strand = Plus / Minus Query: 289 gtccagctctgctccacgatctcacggactttacggttgtactctcgcttgttctcactg 348 ||||||||||||||||| |||||||| ||||| |||||||| || ||||||||||||||| Sbjct: 669 gtccagctctgctccactatctcacgaacttttcggttgtattcccgcttgttctcactg 610 Query: 349 aacattctggcagcttccgaatttgctggagagttggggtttggatcacacagcaaggac 408 || | | ||||||||| || || || || || || ||||||||||| || |||| ||| Sbjct: 609 aataggcgggcagcttcagagttggcaggtgaatttgggtttggatcgcaaagcagcgac 550 Query: 409 tgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttctgtagaata 468 || || || || | ||| ||||| || |||||||| |||||||||||||| ||||| ||| Sbjct: 549 tggatggatgtgagtatagcagctacatcatatatggggctccactggttttgtagtata 490 Query: 469 tccaagcagatgctcccatctgcataaa 496 || ||||| ||||||||||| ||||||| Sbjct: 489 tctaagcatatgctcccatcagcataaa 462
>gb|AC090871.11| Oryza sativa chromosome 3 BAC OSJNBb0060J21 genomic sequence, complete sequence Length = 162497 Score = 137 bits (69), Expect = 6e-29 Identities = 117/133 (87%) Strand = Plus / Minus Query: 278 cttagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgct 337 ||||||| || ||||||||||||||||| ||||| |||||||| ||||||||||| |||| Sbjct: 117276 cttagtcggccgtccagctctgctccacaatctcgcggactttgcggttgtactcgcgct 117217 Query: 338 tgttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcac 397 ||||||| ||||||| |||||| ||||| || ||||| || ||||| ||||||||||||| Sbjct: 117216 tgttctcgctgaacagtctggctgcttcggagtttgcaggggagtttgggtttggatcac 117157 Query: 398 acagcaaggactg 410 | |||| |||||| Sbjct: 117156 agagcagggactg 117144 Score = 103 bits (52), Expect = 8e-19 Identities = 79/88 (89%) Strand = Plus / Minus Query: 412 atagaagtcaatatggcagcaacgtcatatatagggctccactggttctgtagaatatcc 471 ||||| |||||||| |||||||| ||||||||||||||||| || || ||||| |||||| Sbjct: 116670 atagaggtcaatatcgcagcaacatcatatatagggctccattgattttgtaggatatcc 116611 Query: 472 aagcagatgctcccatctgcataaactg 499 |||||||| || |||||||||||||||| Sbjct: 116610 aagcagatacttccatctgcataaactg 116583
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 137 bits (69), Expect = 6e-29 Identities = 117/133 (87%) Strand = Plus / Plus Query: 278 cttagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgct 337 ||||||| || ||||||||||||||||| ||||| |||||||| ||||||||||| |||| Sbjct: 32626631 cttagtcggccgtccagctctgctccacaatctcgcggactttgcggttgtactcgcgct 32626690 Query: 338 tgttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcac 397 ||||||| ||||||| |||||| ||||| || ||||| || ||||| ||||||||||||| Sbjct: 32626691 tgttctcgctgaacagtctggctgcttcggagtttgcaggggagtttgggtttggatcac 32626750 Query: 398 acagcaaggactg 410 | |||| |||||| Sbjct: 32626751 agagcagggactg 32626763 Score = 103 bits (52), Expect = 8e-19 Identities = 79/88 (89%) Strand = Plus / Plus Query: 412 atagaagtcaatatggcagcaacgtcatatatagggctccactggttctgtagaatatcc 471 ||||| |||||||| |||||||| ||||||||||||||||| || || ||||| |||||| Sbjct: 32627237 atagaggtcaatatcgcagcaacatcatatatagggctccattgattttgtaggatatcc 32627296 Query: 472 aagcagatgctcccatctgcataaactg 499 |||||||| || |||||||||||||||| Sbjct: 32627297 aagcagatacttccatctgcataaactg 32627324
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 137 bits (69), Expect = 6e-29 Identities = 117/133 (87%) Strand = Plus / Plus Query: 278 cttagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgct 337 ||||||| || ||||||||||||||||| ||||| |||||||| ||||||||||| |||| Sbjct: 32717141 cttagtcggccgtccagctctgctccacaatctcgcggactttgcggttgtactcgcgct 32717200 Query: 338 tgttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcac 397 ||||||| ||||||| |||||| ||||| || ||||| || ||||| ||||||||||||| Sbjct: 32717201 tgttctcgctgaacagtctggctgcttcggagtttgcaggggagtttgggtttggatcac 32717260 Query: 398 acagcaaggactg 410 | |||| |||||| Sbjct: 32717261 agagcagggactg 32717273 Score = 103 bits (52), Expect = 8e-19 Identities = 79/88 (89%) Strand = Plus / Plus Query: 412 atagaagtcaatatggcagcaacgtcatatatagggctccactggttctgtagaatatcc 471 ||||| |||||||| |||||||| ||||||||||||||||| || || ||||| |||||| Sbjct: 32717747 atagaggtcaatatcgcagcaacatcatatatagggctccattgattttgtaggatatcc 32717806 Query: 472 aagcagatgctcccatctgcataaactg 499 |||||||| || |||||||||||||||| Sbjct: 32717807 aagcagatacttccatctgcataaactg 32717834
>gb|BT018048.1| Zea mays clone EL01N0531D04.c mRNA sequence Length = 817 Score = 135 bits (68), Expect = 2e-28 Identities = 173/208 (83%) Strand = Plus / Minus Query: 289 gtccagctctgctccacgatctcacggactttacggttgtactctcgcttgttctcactg 348 ||||||||||||||||||| ||| || ||||| ||||||||||||||||||||||| ||| Sbjct: 580 gtccagctctgctccacgacctcccgaactttgcggttgtactctcgcttgttctcgctg 521 Query: 349 aacattctggcagcttccgaatttgctggagagttggggtttggatcacacagcaaggac 408 ||||| | ||| ||||| || || || || || || ||||||||||| |||| ||| ||| Sbjct: 520 aacatgcgggcggcttcagagttagcgggcgaattcgggtttggatcgcacaacaatgac 461 Query: 409 tgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttctgtagaata 468 || || || || | ||| ||||| || |||||||| || |||||||| ||||| || ||| Sbjct: 460 tggattgacgtgagtatcgcagctacatcatatatcggactccactgattctgcaggata 401 Query: 469 tccaagcagatgctcccatctgcataaa 496 || ||||| ||||| ||||| ||||||| Sbjct: 400 tctaagcatatgcttccatcagcataaa 373
>gb|DQ191625.1| Solanum tuberosum unknown mRNA Length = 791 Score = 135 bits (68), Expect = 2e-28 Identities = 179/216 (82%) Strand = Plus / Minus Query: 281 agtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgcttgt 340 ||||||||||||||||||||||||| || || | ||| | || |||||||| | || | Sbjct: 526 agtcagcagtccagctctgctccacaatttctctcactctgcgattgtactcccttttat 467 Query: 341 tctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacaca 400 ||||||||||||| | || |||||||| ||||| || |||||||||||||||||||||| Sbjct: 466 tctcactgaacatccgagctgcttccgagtttgcaggtgagttggggtttggatcacaca 407 Query: 401 gcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttct 460 |||| |||||||| || || | ||| |||||||| ||||| || || ||||| || |||| Sbjct: 406 gcaatgactgaatggatgtaagtatagcagcaacatcataaattggactccattgattct 347 Query: 461 gtagaatatccaagcagatgctcccatctgcataaa 496 | ||||||||||| || || || ||||| ||||||| Sbjct: 346 gaagaatatccaaacatatacttccatccgcataaa 311
>gb|AY104593.1| Zea mays PCO096181 mRNA sequence Length = 1003 Score = 135 bits (68), Expect = 2e-28 Identities = 173/208 (83%) Strand = Plus / Minus Query: 289 gtccagctctgctccacgatctcacggactttacggttgtactctcgcttgttctcactg 348 ||||||||||||||||||| ||| || ||||| ||||||||||||||||||||||| ||| Sbjct: 666 gtccagctctgctccacgacctcccgaactttgcggttgtactctcgcttgttctcgctg 607 Query: 349 aacattctggcagcttccgaatttgctggagagttggggtttggatcacacagcaaggac 408 ||||| | ||| ||||| || || || || || || ||||||||||| |||| ||| ||| Sbjct: 606 aacatgcgggcggcttcagagttagcgggcgaattcgggtttggatcgcacaacaatgac 547 Query: 409 tgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttctgtagaata 468 || || || || | ||| ||||| || |||||||| || |||||||| ||||| || ||| Sbjct: 546 tggattgacgtgagtatcgcagctacatcatatatcggactccactgattctgcaggata 487 Query: 469 tccaagcagatgctcccatctgcataaa 496 || ||||| ||||| ||||| ||||||| Sbjct: 486 tctaagcatatgcttccatcagcataaa 459
>gb|DQ294271.1| Solanum tuberosum clone 147C03 ubiquitin carrier-like protein mRNA, complete cds Length = 788 Score = 135 bits (68), Expect = 2e-28 Identities = 179/216 (82%) Strand = Plus / Minus Query: 281 agtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgcttgt 340 ||||||||||||||||||||||||| || || | ||| | || |||||||| | || | Sbjct: 527 agtcagcagtccagctctgctccacaatttctctcactctgcgattgtactcccttttat 468 Query: 341 tctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacaca 400 ||||||||||||| | || |||||||| ||||| || |||||||||||||||||||||| Sbjct: 467 tctcactgaacatccgagctgcttccgagtttgcaggtgagttggggtttggatcacaca 408 Query: 401 gcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttct 460 |||| |||||||| || || | ||| |||||||| ||||| || || ||||| || |||| Sbjct: 407 gcaatgactgaatggatgtaagtatagcagcaacatcataaattggactccattgattct 348 Query: 461 gtagaatatccaagcagatgctcccatctgcataaa 496 | ||||||||||| || || || ||||| ||||||| Sbjct: 347 gaagaatatccaaacatatacttccatccgcataaa 312
>gb|L06967.1|ALFUBIQUIT Medicago sativa ubiquitin carrier protein mRNA, complete cds Length = 910 Score = 135 bits (68), Expect = 2e-28 Identities = 182/220 (82%) Strand = Plus / Minus Query: 277 ccttagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgc 336 ||||||||||| ||||| ||||||||||| | || || ||| |||| |||||||| ||| Sbjct: 585 ccttagtcagctgtccaactctgctccacaacttcccgcactctacgattgtactcacgc 526 Query: 337 ttgttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatca 396 ||||||||||||||||||| || ||||| || ||||| ||||| || ||||| |||||| Sbjct: 525 ttgttctcactgaacattcgagccgcttcagagtttgcaggagaatttgggttgggatca 466 Query: 397 cacagcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactgg 456 || ||||| ||||| |||||||| | || |||||||| ||||||||||| |||||||| Sbjct: 465 caaagcaatgactggatagaagtgagaatcgcagcaacatcatatataggactccactga 406 Query: 457 ttctgtagaatatccaagcagatgctcccatctgcataaa 496 || || | ||||||| || || || ||||||||||||| Sbjct: 405 ttttgcaatatatccagacaaatacttccatctgcataaa 366
>ref|XM_469944.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3633 Score = 131 bits (66), Expect = 3e-27 Identities = 111/126 (88%) Strand = Plus / Plus Query: 278 cttagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgct 337 ||||||| || ||||||||||||||||| ||||| |||||||| ||||||||||| |||| Sbjct: 3504 cttagtcggccgtccagctctgctccacaatctcgcggactttgcggttgtactcgcgct 3563 Query: 338 tgttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcac 397 ||||||| ||||||| |||||| ||||| || ||||| || ||||| ||||||||||||| Sbjct: 3564 tgttctcgctgaacagtctggctgcttcggagtttgcaggggagtttgggtttggatcac 3623 Query: 398 acagca 403 | |||| Sbjct: 3624 agagca 3629
>ref|NM_202096.1| Arabidopsis thaliana UBC1 (UBIQUITIN CARRIER PROTEIN 1); ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT1G14400 (UBC1) transcript variant AT1G14400.2 mRNA, complete cds Length = 819 Score = 129 bits (65), Expect = 1e-26 Identities = 179/217 (82%) Strand = Plus / Minus Query: 280 tagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgcttg 339 ||||||||||||||||| ||||| || | ||||| ||| | | ||||||||| |||||| Sbjct: 550 tagtcagcagtccagctttgctcaacaacatcacgcactctcctgttgtactcgcgcttg 491 Query: 340 ttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacac 399 | || ||| |||| | ||||||||||| ||||| ||||| || || || || ||||| Sbjct: 490 ctttcgctgtacatccgagcagcttccgagtttgcaggagaattcggattagggtcacag 431 Query: 400 agcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttc 459 ||||||||||| || || || | ||| |||||||| ||||| || || ||||||||||| Sbjct: 430 agcaaggactggatggaggtaagtatagcagcaacatcatagattggactccactggttt 371 Query: 460 tgtagaatatccaagcagatgctcccatctgcataaa 496 |||||||| ||||||||||| |||||||||||||||| Sbjct: 370 tgtagaatgtccaagcagatactcccatctgcataaa 334
>ref|NM_101307.2| Arabidopsis thaliana UBC1 (UBIQUITIN CARRIER PROTEIN 1); ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT1G14400 (UBC1) transcript variant AT1G14400.1 mRNA, complete cds Length = 948 Score = 129 bits (65), Expect = 1e-26 Identities = 179/217 (82%) Strand = Plus / Minus Query: 280 tagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgcttg 339 ||||||||||||||||| ||||| || | ||||| ||| | | ||||||||| |||||| Sbjct: 679 tagtcagcagtccagctttgctcaacaacatcacgcactctcctgttgtactcgcgcttg 620 Query: 340 ttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacac 399 | || ||| |||| | ||||||||||| ||||| ||||| || || || || ||||| Sbjct: 619 ctttcgctgtacatccgagcagcttccgagtttgcaggagaattcggattagggtcacag 560 Query: 400 agcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttc 459 ||||||||||| || || || | ||| |||||||| ||||| || || ||||||||||| Sbjct: 559 agcaaggactggatggaggtaagtatagcagcaacatcatagattggactccactggttt 500 Query: 460 tgtagaatatccaagcagatgctcccatctgcataaa 496 |||||||| ||||||||||| |||||||||||||||| Sbjct: 499 tgtagaatgtccaagcagatactcccatctgcataaa 463
>gb|AF332451.1| Arabidopsis thaliana putative E2, ubiquitin-conjugating enzyme 1 (At1g14400) mRNA, complete cds Length = 459 Score = 129 bits (65), Expect = 1e-26 Identities = 179/217 (82%) Strand = Plus / Minus Query: 280 tagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgcttg 339 ||||||||||||||||| ||||| || | ||||| ||| | | ||||||||| |||||| Sbjct: 458 tagtcagcagtccagctttgctcaacaacatcacgcactctcctgttgtactcgcgcttg 399 Query: 340 ttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacac 399 | || ||| |||| | ||||||||||| ||||| ||||| || || || || ||||| Sbjct: 398 ctttcgctgtacatccgagcagcttccgagtttgcaggagaattcggattagggtcacag 339 Query: 400 agcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttc 459 ||||||||||| || || || | ||| |||||||| ||||| || || ||||||||||| Sbjct: 338 agcaaggactggatggaggtaagtatagcagcaacatcatagattggactccactggttt 279 Query: 460 tgtagaatatccaagcagatgctcccatctgcataaa 496 |||||||| ||||||||||| |||||||||||||||| Sbjct: 278 tgtagaatgtccaagcagatactcccatctgcataaa 242
>gb|AY091330.1| Arabidopsis thaliana putative ubiquitin-conjugating enzyme 1 (UBC1) (At1g14400) mRNA, complete cds Length = 490 Score = 129 bits (65), Expect = 1e-26 Identities = 179/217 (82%) Strand = Plus / Minus Query: 280 tagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgcttg 339 ||||||||||||||||| ||||| || | ||||| ||| | | ||||||||| |||||| Sbjct: 458 tagtcagcagtccagctttgctcaacaacatcacgcactctcctgttgtactcgcgcttg 399 Query: 340 ttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacac 399 | || ||| |||| | ||||||||||| ||||| ||||| || || || || ||||| Sbjct: 398 ctttcgctgtacatccgagcagcttccgagtttgcaggagaattcggattagggtcacag 339 Query: 400 agcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttc 459 ||||||||||| || || || | ||| |||||||| ||||| || || ||||||||||| Sbjct: 338 agcaaggactggatggaggtaagtatagcagcaacatcatagattggactccactggttt 279 Query: 460 tgtagaatatccaagcagatgctcccatctgcataaa 496 |||||||| ||||||||||| |||||||||||||||| Sbjct: 278 tgtagaatgtccaagcagatactcccatctgcataaa 242
>gb|AY070074.1| Arabidopsis thaliana putative E2, ubiquitin-conjugating enzyme UBC1 (At1g14400) mRNA, complete cds Length = 839 Score = 129 bits (65), Expect = 1e-26 Identities = 179/217 (82%) Strand = Plus / Minus Query: 280 tagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgcttg 339 ||||||||||||||||| ||||| || | ||||| ||| | | ||||||||| |||||| Sbjct: 631 tagtcagcagtccagctttgctcaacaacatcacgcactctcctgttgtactcgcgcttg 572 Query: 340 ttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacac 399 | || ||| |||| | ||||||||||| ||||| ||||| || || || || ||||| Sbjct: 571 ctttcgctgtacatccgagcagcttccgagtttgcaggagaattcggattagggtcacag 512 Query: 400 agcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttc 459 ||||||||||| || || || | ||| |||||||| ||||| || || ||||||||||| Sbjct: 511 agcaaggactggatggaggtaagtatagcagcaacatcatagattggactccactggttt 452 Query: 460 tgtagaatatccaagcagatgctcccatctgcataaa 496 |||||||| ||||||||||| |||||||||||||||| Sbjct: 451 tgtagaatgtccaagcagatactcccatctgcataaa 415
>emb|BX816760.1|CNS0AD3H Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH67ZB10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 847 Score = 129 bits (65), Expect = 1e-26 Identities = 179/217 (82%) Strand = Plus / Minus Query: 280 tagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgcttg 339 ||||||||||||||||| ||||| || | ||||| ||| | | ||||||||| |||||| Sbjct: 604 tagtcagcagtccagctttgctcaacaacatcacgcactctcctgttgtactcgcgcttg 545 Query: 340 ttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacac 399 | || ||| |||| | ||||||||||| ||||| ||||| || || || || ||||| Sbjct: 544 ctttcgctgtacatccgagcagcttccgagtttgcaggagaattcggattagggtcacag 485 Query: 400 agcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttc 459 ||||||||||| || || || | ||| |||||||| ||||| || || ||||||||||| Sbjct: 484 agcaaggactggatggaggtaagtatagcagcaacatcatagattggactccactggttt 425 Query: 460 tgtagaatatccaagcagatgctcccatctgcataaa 496 |||||||| ||||||||||| |||||||||||||||| Sbjct: 424 tgtagaatgtccaagcagatactcccatctgcataaa 388
>gb|AY085783.1| Arabidopsis thaliana clone 18146 mRNA, complete sequence Length = 838 Score = 129 bits (65), Expect = 1e-26 Identities = 179/217 (82%) Strand = Plus / Minus Query: 280 tagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgcttg 339 ||||||||||||||||| ||||| || | ||||| ||| | | ||||||||| |||||| Sbjct: 679 tagtcagcagtccagctttgctcaacaacatcacgcactctcctgttgtactcgcgcttg 620 Query: 340 ttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacac 399 | || ||| |||| | ||||||||||| ||||| ||||| || || || || ||||| Sbjct: 619 ctttcgctgtacatccgagcagcttccgagtttgcaggagaattcggattagggtcacag 560 Query: 400 agcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttc 459 ||||||||||| || || || | ||| |||||||| ||||| || || ||||||||||| Sbjct: 559 agcaaggactggatggaggtaagtatagcagcaacatcatagattggactccactggttt 500 Query: 460 tgtagaatatccaagcagatgctcccatctgcataaa 496 |||||||| ||||||||||| |||||||||||||||| Sbjct: 499 tgtagaatgtccaagcagatactcccatctgcataaa 463
>gb|DQ027016.1| Arabidopsis thaliana ubiquitinating enzyme (At1g14400) mRNA, complete cds Length = 459 Score = 129 bits (65), Expect = 1e-26 Identities = 179/217 (82%) Strand = Plus / Minus Query: 280 tagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgcttg 339 ||||||||||||||||| ||||| || | ||||| ||| | | ||||||||| |||||| Sbjct: 458 tagtcagcagtccagctttgctcaacaacatcacgcactctcctgttgtactcgcgcttg 399 Query: 340 ttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacac 399 | || ||| |||| | ||||||||||| ||||| ||||| || || || || ||||| Sbjct: 398 ctttcgctgtacatccgagcagcttccgagtttgcaggagaattcggattagggtcacag 339 Query: 400 agcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttc 459 ||||||||||| || || || | ||| |||||||| ||||| || || ||||||||||| Sbjct: 338 agcaaggactggatggaggtaagtatagcagcaacatcatagattggactccactggttt 279 Query: 460 tgtagaatatccaagcagatgctcccatctgcataaa 496 |||||||| ||||||||||| |||||||||||||||| Sbjct: 278 tgtagaatgtccaagcagatactcccatctgcataaa 242
>gb|M62721.1|ATHUCP1B Arabidopsis thaliana ubiquitin carrier protein (UBC1) mRNA, complete cds Length = 749 Score = 129 bits (65), Expect = 1e-26 Identities = 179/217 (82%) Strand = Plus / Minus Query: 280 tagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgcttg 339 ||||||||||||||||| ||||| || | ||||| ||| | | ||||||||| |||||| Sbjct: 557 tagtcagcagtccagctttgctcaacaacatcacgcactctcctgttgtactcgcgcttg 498 Query: 340 ttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacac 399 | || ||| |||| | ||||||||||| ||||| ||||| || || || || ||||| Sbjct: 497 ctttcgctgtacatccgagcagcttccgagtttgcaggagaattcggattagggtcacag 438 Query: 400 agcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttc 459 ||||||||||| || || || | ||| |||||||| ||||| || || ||||||||||| Sbjct: 437 agcaaggactggatggaggtaagtatagcagcaacatcatagattggactccactggttt 378 Query: 460 tgtagaatatccaagcagatgctcccatctgcataaa 496 |||||||| ||||||||||| |||||||||||||||| Sbjct: 377 tgtagaatgtccaagcagatactcccatctgcataaa 341
>emb|AJ879070.1| Capsicum chinense mRNA for ubiquitin-conjugating enzyme Length = 957 Score = 127 bits (64), Expect = 5e-26 Identities = 178/216 (82%) Strand = Plus / Minus Query: 281 agtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgcttgt 340 ||||||| |||||||||||||| || |||||||| || || | ||||||||| ||||||| Sbjct: 671 agtcagctgtccagctctgctcaacaatctcacgcaccttcctgttgtactcgcgcttgt 612 Query: 341 tctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacaca 400 |||| || ||||| | || ||||| ||||| ||||| ||||| ||||||||||| || | Sbjct: 611 tctcgctaaacatgcgcgctgcttctgaattagctggcgagtttgggtttggatcgcaga 552 Query: 401 gcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttct 460 |||| ||||| || ||||| | ||| || ||||| ||||| ||||| |||||||| || | Sbjct: 551 gcaaagactggattgaagtgagtatagccgcaacatcataaataggactccactgatttt 492 Query: 461 gtagaatatccaagcagatgctcccatctgcataaa 496 | || || |||||||| || |||||||| ||||||| Sbjct: 491 gcagtatgtccaagcaaatactcccatcggcataaa 456
>emb|BX817066.1|CNS0AD3L Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH83ZF07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 817 Score = 127 bits (64), Expect = 5e-26 Identities = 178/216 (82%) Strand = Plus / Minus Query: 281 agtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgcttgt 340 |||||||||||||||| ||||| || | ||||| ||| | | ||||||||| |||||| Sbjct: 650 agtcagcagtccagctttgctcaacaacatcacgcactctcctgttgtactcgcgcttgc 591 Query: 341 tctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacaca 400 | || ||| |||| | ||||||||||| ||||| ||||| || || || || ||||| | Sbjct: 590 tttcgctgtacatccgagcagcttccgagtttgcaggagaattcggattagggtcacaga 531 Query: 401 gcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttct 460 |||||||||| || || || | ||| |||||||| ||||| || || ||||||||||| | Sbjct: 530 gcaaggactggatggaggtaagtatagcagcaacatcatagattggactccactggtttt 471 Query: 461 gtagaatatccaagcagatgctcccatctgcataaa 496 ||||||| ||||||||||| |||||||||||||||| Sbjct: 470 gtagaatgtccaagcagatactcccatctgcataaa 435
>ref|NM_126331.2| Arabidopsis thaliana ATUBC2; ubiquitin conjugating enzyme AT2G02760 (ATUBC2) mRNA, complete cds Length = 860 Score = 121 bits (61), Expect = 3e-24 Identities = 178/217 (82%) Strand = Plus / Minus Query: 280 tagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgcttg 339 ||||| ||||||||||| || || || | ||| |||||| | | ||||||||| |||||| Sbjct: 637 tagtcggcagtccagctttgttcgacaacctcgcggactcttctgttgtactcgcgcttg 578 Query: 340 ttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacac 399 | ||||||||||||| ||||||||||||||||| ||||| || || || |||||||| Sbjct: 577 ctttcactgaacattcgtgcagcttccgaatttgcaggagaattcggattaggatcacat 518 Query: 400 agcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttc 459 ||||| |||||||| || || | ||| ||||| || || ||||| || ||||| ||||| Sbjct: 517 agcaatgactgaatggaggttagtatagcagcgacatcgtatattggactccattggttt 458 Query: 460 tgtagaatatccaagcagatgctcccatctgcataaa 496 || ||||| |||||||| || |||||||| ||||||| Sbjct: 457 tggagaatgtccaagcatatactcccatcagcataaa 421
>emb|Y13031.1|ATUBC2 A.thaliana mRNA for ubiquitin conjugating enzyme UBC2 Length = 824 Score = 121 bits (61), Expect = 3e-24 Identities = 178/217 (82%) Strand = Plus / Minus Query: 280 tagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgcttg 339 ||||| ||||||||||| || || || | ||| |||||| | | ||||||||| |||||| Sbjct: 583 tagtcggcagtccagctttgttcgacaacctcgcggactcttctgttgtactcgcgcttg 524 Query: 340 ttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacac 399 | ||||||||||||| ||||||||||||||||| ||||| || || || |||||||| Sbjct: 523 ctttcactgaacattcgtgcagcttccgaatttgcaggagaattcggattaggatcacat 464 Query: 400 agcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttc 459 ||||| |||||||| || || | ||| ||||| || || ||||| || ||||| ||||| Sbjct: 463 agcaatgactgaatggaggttagtatagcagcgacatcgtatattggactccattggttt 404 Query: 460 tgtagaatatccaagcagatgctcccatctgcataaa 496 || ||||| |||||||| || |||||||| ||||||| Sbjct: 403 tggagaatgtccaagcatatactcccatcagcataaa 367
>gb|AY072479.1| Arabidopsis thaliana putative ubiquitin-conjugating enzyme E2 (At2g02760; T20F6.10) mRNA, complete cds Length = 538 Score = 121 bits (61), Expect = 3e-24 Identities = 178/217 (82%) Strand = Plus / Minus Query: 280 tagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgcttg 339 ||||| ||||||||||| || || || | ||| |||||| | | ||||||||| |||||| Sbjct: 458 tagtcggcagtccagctttgttcgacaacctcgcggactcttctgttgtactcgcgcttg 399 Query: 340 ttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacac 399 | ||||||||||||| ||||||||||||||||| ||||| || || || |||||||| Sbjct: 398 ctttcactgaacattcgtgcagcttccgaatttgcaggagaattcggattaggatcacat 339 Query: 400 agcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttc 459 ||||| |||||||| || || | ||| ||||| || || ||||| || ||||| ||||| Sbjct: 338 agcaatgactgaatggaggttagtatagcagcgacatcgtatattggactccattggttt 279 Query: 460 tgtagaatatccaagcagatgctcccatctgcataaa 496 || ||||| |||||||| || |||||||| ||||||| Sbjct: 278 tggagaatgtccaagcatatactcccatcagcataaa 242
>gb|AF370558.1|AF370558 Arabidopsis thaliana putative ubiquitin-conjugating enzyme E2 (At2g02760; T20F6.10) mRNA, complete cds Length = 830 Score = 121 bits (61), Expect = 3e-24 Identities = 178/217 (82%) Strand = Plus / Minus Query: 280 tagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgcttg 339 ||||| ||||||||||| || || || | ||| |||||| | | ||||||||| |||||| Sbjct: 607 tagtcggcagtccagctttgttcgacaacctcgcggactcttctgttgtactcgcgcttg 548 Query: 340 ttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacac 399 | ||||||||||||| ||||||||||||||||| ||||| || || || |||||||| Sbjct: 547 ctttcactgaacattcgtgcagcttccgaatttgcaggagaattcggattaggatcacat 488 Query: 400 agcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttc 459 ||||| |||||||| || || | ||| ||||| || || ||||| || ||||| ||||| Sbjct: 487 agcaatgactgaatggaggttagtatagcagcgacatcgtatattggactccattggttt 428 Query: 460 tgtagaatatccaagcagatgctcccatctgcataaa 496 || ||||| |||||||| || |||||||| ||||||| Sbjct: 427 tggagaatgtccaagcatatactcccatcagcataaa 391
>gb|DQ027017.1| Arabidopsis thaliana ubiquitinating enzyme (At2g02760) mRNA, complete cds Length = 459 Score = 121 bits (61), Expect = 3e-24 Identities = 178/217 (82%) Strand = Plus / Minus Query: 280 tagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgcttg 339 ||||| ||||||||||| || || || | ||| |||||| | | ||||||||| |||||| Sbjct: 458 tagtcggcagtccagctttgttcgacaacctcgcggactcttctgttgtactcgcgcttg 399 Query: 340 ttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacac 399 | ||||||||||||| ||||||||||||||||| ||||| || || || |||||||| Sbjct: 398 ctttcactgaacattcgtgcagcttccgaatttgcaggagaattcggattaggatcacat 339 Query: 400 agcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttc 459 ||||| |||||||| || || | ||| ||||| || || ||||| || ||||| ||||| Sbjct: 338 agcaatgactgaatggaggttagtatagcagcgacatcgtatattggactccattggttt 279 Query: 460 tgtagaatatccaagcagatgctcccatctgcataaa 496 || ||||| |||||||| || |||||||| ||||||| Sbjct: 278 tggagaatgtccaagcatatactcccatcagcataaa 242
>gb|AF262934.1|AF262934 Avicennia marina ubiquitin conjugating protein (UBC) mRNA, complete cds Length = 850 Score = 107 bits (54), Expect = 5e-20 Identities = 174/214 (81%) Strand = Plus / Minus Query: 283 tcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgcttgttc 342 ||||| |||||||| |||||||| || || | ||| | || ||||| || ||||||||| Sbjct: 514 tcagctgtccagctttgctccacaatttcccttactctgcgattgtattcgcgcttgttc 455 Query: 343 tcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacacagc 402 ||||||||||| | |||||||| |||||||| ||||| || || || || ||||||| | Sbjct: 454 tcactgaacatccgagcagcttcagaatttgcaggagaatttggattcgggtcacacaac 395 Query: 403 aaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttctgt 462 | ||||| ||||| || | |||||| |||| |||||||||||| ||||| ||||| || Sbjct: 394 agtgactggatagacgtaagtatggctgcaatgtcatatataggactccattggttttga 335 Query: 463 agaatatccaagcagatgctcccatctgcataaa 496 || || |||||||| ||||| ||||| ||||||| Sbjct: 334 aggatgtccaagcatatgcttccatccgcataaa 301
>dbj|AB026055.1| Nicotiana tabacum Ntubc1 mRNA for ubiquitin-conjugating enzyme (E2), complete cds Length = 809 Score = 103 bits (52), Expect = 8e-19 Identities = 136/164 (82%) Strand = Plus / Minus Query: 289 gtccagctctgctccacgatctcacggactttacggttgtactctcgcttgttctcactg 348 ||||||||||| || || ||||| || || || | |||||| || ||||||||||||||| Sbjct: 535 gtccagctctgttcaacaatctcgcgcaccttcctgttgtattcacgcttgttctcactg 476 Query: 349 aacattctggcagcttccgaatttgctggagagttggggtttggatcacacagcaaggac 408 ||||| | || ||||| ||||| ||||| |||||||| ||||||||||| ||||| ||| Sbjct: 475 aacatgcgtgctgcttctgaattagctggcgagttgggatttggatcacagagcaaagac 416 Query: 409 tgaatagaagtcaatatggcagcaacgtcatatatagggctcca 452 || || ||||||| ||| ||||| || |||||||| || ||||| Sbjct: 415 tggattgaagtcagtatagcagctacatcatatatgggactcca 372
>dbj|AB026056.1| Nicotiana tabacum Ntubc2 mRNA for ubiquitin-conjugating enzyme (E2), complete cds Length = 784 Score = 101 bits (51), Expect = 3e-18 Identities = 138/167 (82%) Strand = Plus / Minus Query: 289 gtccagctctgctccacgatctcacggactttacggttgtactctcgcttgttctcactg 348 ||||||||||| || || ||||| || || || | |||||| || ||||||||||||||| Sbjct: 533 gtccagctctgttcaacaatctcgcgcaccttcctgttgtattcgcgcttgttctcactg 474 Query: 349 aacattctggcagcttccgaatttgctggagagttggggtttggatcacacagcaaggac 408 ||||| | || ||||| ||||| ||||| ||||| || ||||||||||| ||||| ||| Sbjct: 473 aacatgcgtgctgcttctgaattagctggcgagttaggatttggatcacagagcaaagac 414 Query: 409 tgaatagaagtcaatatggcagcaacgtcatatatagggctccactg 455 || || ||||||| ||| ||||| || |||||||| || |||||||| Sbjct: 413 tggattgaagtcagtatagcagctacatcatatatgggactccactg 367
>emb|AJ843121.1| Plantago major mRNA for Ubiquitin-conjugating enzyme (ubc2 gene) Length = 858 Score = 99.6 bits (50), Expect = 1e-17 Identities = 176/218 (80%) Strand = Plus / Minus Query: 279 ttagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgctt 338 |||||| || ||||| || |||||||| |||||||| || || | |||||| || ||||| Sbjct: 599 ttagtcggctgtccaactttgctccacaatctcacgcaccttcctgttgtaatcacgctt 540 Query: 339 gttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcaca 398 ||| |||||||||| | ||||||||||| ||||| || || || || ||||||||||| Sbjct: 539 gttttcactgaacaaccgtgcagcttccgagtttgcaggtgaatttggatttggatcaca 480 Query: 399 cagcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggtt 458 |||| ||||| ||||| || | ||| ||||| || |||||||| || |||||||| || Sbjct: 479 gagcagcgactggatagatgtaagtattgcagctacatcatatattggactccactgatt 420 Query: 459 ctgtagaatatccaagcagatgctcccatctgcataaa 496 || || ||||||||||| || || ||||| ||||||| Sbjct: 419 ttgcaggatatccaagcaaatacttccatcagcataaa 382
>gb|AC122726.21| Medicago truncatula clone mth2-23o24, complete sequence Length = 130999 Score = 91.7 bits (46), Expect = 3e-15 Identities = 112/134 (83%) Strand = Plus / Minus Query: 277 ccttagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgc 336 ||||||||||| ||||| ||||||||||| | || || ||| | || |||||||| ||| Sbjct: 100860 ccttagtcagctgtccaactctgctccacaacttcccgcactcttcgattgtactcacgc 100801 Query: 337 ttgttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatca 396 ||||||||||||||||||| || ||||| || ||||| ||||| || ||||| |||||| Sbjct: 100800 ttgttctcactgaacattcgagccgcttcagagtttgcaggagaatttgggttgggatca 100741 Query: 397 cacagcaaggactg 410 || ||||| ||||| Sbjct: 100740 caaagcaatgactg 100727 Score = 42.1 bits (21), Expect = 2.4 Identities = 60/73 (82%) Strand = Plus / Minus Query: 427 gcagcaacgtcatatatagggctccactggttctgtagaatatccaagcagatgctccca 486 |||||||| || |||||||| |||||||| || || | ||||||| || || || ||| Sbjct: 98755 gcagcaacatcgtatataggactccactgattttgcaatatatccagacaaatacttcca 98696 Query: 487 tctgcataaactg 499 ||||||||||||| Sbjct: 98695 tctgcataaactg 98683
>emb|BX814055.1|CNS0ADOD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB54ZE09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 804 Score = 91.7 bits (46), Expect = 3e-15 Identities = 172/214 (80%) Strand = Plus / Minus Query: 283 tcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgcttgttc 342 |||||||||||||| ||||| || | ||||| ||| | | || |||||| |||||| | Sbjct: 606 tcagcagtccagctttgctcaacaacatcacgcactctcctgtggtactcgcgcttgctt 547 Query: 343 tcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacacagc 402 || ||| |||| | ||||||||||| ||||| ||||| || || | || | ||| ||| Sbjct: 546 tcgctgtacatccgagcagcttccgagtttgcaggagaattcggataagggtaacagagc 487 Query: 403 aaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttctgt 462 |||||||| || || || | ||| ||||| || ||||| || || ||||||||||| ||| Sbjct: 486 aaggactggatggaggtaagtatagcagctacatcatagattggactccactggttttgt 427 Query: 463 agaatatccaagcagatgctcccatctgcataaa 496 ||||| ||||||||||| |||||||||||||||| Sbjct: 426 agaatgtccaagcagatactcccatctgcataaa 393
>dbj|AP004950.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT42E10, TM0123, complete sequence Length = 79601 Score = 89.7 bits (45), Expect = 1e-14 Identities = 111/133 (83%) Strand = Plus / Plus Query: 278 cttagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgct 337 ||||||| || ||||| ||||||||||| || || | ||| | ||||||||||| |||| Sbjct: 11165 cttagtctgctgtccaactctgctccacaatttccctcactctgcggttgtactcacgct 11224 Query: 338 tgttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcac 397 |||||||||| ||||||| || ||||| || ||||| |||||||| ||||| ||||||| Sbjct: 11225 tgttctcactaaacattcgagctgcttcggagtttgcaggagagtttgggttgggatcac 11284 Query: 398 acagcaaggactg 410 | ||||| ||||| Sbjct: 11285 aaagcaatgactg 11297 Score = 48.1 bits (24), Expect = 0.039 Identities = 60/72 (83%) Strand = Plus / Plus Query: 427 gcagcaacgtcatatatagggctccactggttctgtagaatatccaagcagatgctccca 486 ||||| || ||||||||||| |||||||| || |||| |||||||| || || || ||| Sbjct: 15395 gcagctacatcatatataggactccactgattttgtaatatatccaaacaaatacttcca 15454 Query: 487 tctgcataaact 498 ||||| |||||| Sbjct: 15455 tctgcgtaaact 15466
>gb|AC012188.2|F14L17 Sequence of BAC F14L17 from Arabidopsis thaliana chromosome 1, complete sequence Length = 111686 Score = 87.7 bits (44), Expect = 5e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 427 gcagcaacgtcatatatagggctccactggttctgtagaatatccaagcagatgctccca 486 |||||||| ||||| || || ||||||||||| |||||||| ||||||||||| |||||| Sbjct: 58616 gcagcaacatcatagattggactccactggttttgtagaatgtccaagcagatactccca 58675 Query: 487 tctgcataaact 498 |||||||||||| Sbjct: 58676 tctgcataaact 58687 Score = 61.9 bits (31), Expect = 3e-06 Identities = 106/131 (80%) Strand = Plus / Plus Query: 280 tagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgcttg 339 ||||||||||||||||| ||||| || | ||||| ||| | | ||||||||| |||||| Sbjct: 58374 tagtcagcagtccagctttgctcaacaacatcacgcactctcctgttgtactcgcgcttg 58433 Query: 340 ttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacac 399 | || ||| |||| | ||||||||||| ||||| ||||| || || || || ||||| Sbjct: 58434 ctttcgctgtacatccgagcagcttccgagtttgcaggagaattcggattagggtcacag 58493 Query: 400 agcaaggactg 410 ||||||||||| Sbjct: 58494 agcaaggactg 58504
>gb|L19351.1|ATHUBIQUA Arabidopsis thaliana 16kDa ubiquitin conjugating enzyme (UBC1) gene, complete cds Length = 1887 Score = 87.7 bits (44), Expect = 5e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 427 gcagcaacgtcatatatagggctccactggttctgtagaatatccaagcagatgctccca 486 |||||||| ||||| || || ||||||||||| |||||||| ||||||||||| |||||| Sbjct: 1466 gcagcaacatcatagattggactccactggttttgtagaatgtccaagcagatactccca 1407 Query: 487 tctgcataaact 498 |||||||||||| Sbjct: 1406 tctgcataaact 1395 Score = 61.9 bits (31), Expect = 3e-06 Identities = 106/131 (80%) Strand = Plus / Minus Query: 280 tagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgcttg 339 ||||||||||||||||| ||||| || | ||||| ||| | | ||||||||| |||||| Sbjct: 1708 tagtcagcagtccagctttgctcaacaacatcacgcactctcctgttgtactcgcgcttg 1649 Query: 340 ttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacac 399 | || ||| |||| | ||||||||||| ||||| ||||| || || || || ||||| Sbjct: 1648 ctttcgctgtacatccgagcagcttccgagtttgcaggagaattcggattagggtcacag 1589 Query: 400 agcaaggactg 410 ||||||||||| Sbjct: 1588 agcaaggactg 1578
>gb|AC135431.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0683B12, complete sequence Length = 187523 Score = 85.7 bits (43), Expect = 2e-13 Identities = 91/107 (85%) Strand = Plus / Minus Query: 289 gtccagctctgctccacgatctcacggactttacggttgtactctcgcttgttctcactg 348 ||||||||||||||||| |||||||| ||||| |||||||| || ||||||||||||||| Sbjct: 1535 gtccagctctgctccactatctcacgaacttttcggttgtattcccgcttgttctcactg 1476 Query: 349 aacattctggcagcttccgaatttgctggagagttggggtttggatc 395 || | | ||||||||| || || || || || || ||||||||||| Sbjct: 1475 aataggcgggcagcttcagagttggcaggtgaatttgggtttggatc 1429 Score = 81.8 bits (41), Expect = 3e-12 Identities = 65/73 (89%) Strand = Plus / Minus Query: 427 gcagcaacgtcatatatagggctccactggttctgtagaatatccaagcagatgctccca 486 ||||| || |||||||| |||||||||||||| ||||| ||||| ||||| ||||||||| Sbjct: 599 gcagctacatcatatatggggctccactggttttgtagtatatctaagcatatgctccca 540 Query: 487 tctgcataaactg 499 || |||||||||| Sbjct: 539 tcagcataaactg 527
>gb|AC002521.3| Arabidopsis thaliana chromosome 2 clone T20F6 map CIC11A04, complete sequence Length = 81004 Score = 85.7 bits (43), Expect = 2e-13 Identities = 109/131 (83%) Strand = Plus / Plus Query: 280 tagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgcttg 339 ||||| ||||||||||| || || || | ||| |||||| | | ||||||||| |||||| Sbjct: 52358 tagtcggcagtccagctttgttcgacaacctcgcggactcttctgttgtactcgcgcttg 52417 Query: 340 ttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacac 399 | ||||||||||||| ||||||||||||||||| ||||| || || || |||||||| Sbjct: 52418 ctttcactgaacattcgtgcagcttccgaatttgcaggagaattcggattaggatcacat 52477 Query: 400 agcaaggactg 410 ||||| ||||| Sbjct: 52478 agcaatgactg 52488 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 439 tatatagggctccactggttctgtagaatatccaagcagatgctcccatctgcataaact 498 ||||| || ||||| ||||| || ||||| |||||||| || |||||||| ||||||||| Sbjct: 52671 tatattggactccattggttttggagaatgtccaagcatatactcccatcagcataaact 52730 Query: 499 gca 501 ||| Sbjct: 52731 gca 52733
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 85.7 bits (43), Expect = 2e-13 Identities = 91/107 (85%) Strand = Plus / Minus Query: 289 gtccagctctgctccacgatctcacggactttacggttgtactctcgcttgttctcactg 348 ||||||||||||||||| |||||||| ||||| |||||||| || ||||||||||||||| Sbjct: 4906950 gtccagctctgctccactatctcacgaacttttcggttgtattcccgcttgttctcactg 4906891 Query: 349 aacattctggcagcttccgaatttgctggagagttggggtttggatc 395 || | | ||||||||| || || || || || || ||||||||||| Sbjct: 4906890 aataggcgggcagcttcagagttggcaggtgaatttgggtttggatc 4906844 Score = 81.8 bits (41), Expect = 3e-12 Identities = 65/73 (89%) Strand = Plus / Minus Query: 427 gcagcaacgtcatatatagggctccactggttctgtagaatatccaagcagatgctccca 486 ||||| || |||||||| |||||||||||||| ||||| ||||| ||||| ||||||||| Sbjct: 4906014 gcagctacatcatatatggggctccactggttttgtagtatatctaagcatatgctccca 4905955 Query: 487 tctgcataaactg 499 || |||||||||| Sbjct: 4905954 tcagcataaactg 4905942
>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11, complete sequence Length = 187956 Score = 85.7 bits (43), Expect = 2e-13 Identities = 91/107 (85%) Strand = Plus / Minus Query: 289 gtccagctctgctccacgatctcacggactttacggttgtactctcgcttgttctcactg 348 ||||||||||||||||| |||||||| ||||| |||||||| || ||||||||||||||| Sbjct: 179358 gtccagctctgctccactatctcacgaacttttcggttgtattcccgcttgttctcactg 179299 Query: 349 aacattctggcagcttccgaatttgctggagagttggggtttggatc 395 || | | ||||||||| || || || || || || ||||||||||| Sbjct: 179298 aataggcgggcagcttcagagttggcaggtgaatttgggtttggatc 179252 Score = 81.8 bits (41), Expect = 3e-12 Identities = 65/73 (89%) Strand = Plus / Minus Query: 427 gcagcaacgtcatatatagggctccactggttctgtagaatatccaagcagatgctccca 486 ||||| || |||||||| |||||||||||||| ||||| ||||| ||||| ||||||||| Sbjct: 178422 gcagctacatcatatatggggctccactggttttgtagtatatctaagcatatgctccca 178363 Query: 487 tctgcataaactg 499 || |||||||||| Sbjct: 178362 tcagcataaactg 178350
>gb|L19353.1|ATHUBIQUC Arabidopsis thaliana 16kDa ubiquitin conjugating enzyme (UBC2) gene, complete cds Length = 2282 Score = 85.7 bits (43), Expect = 2e-13 Identities = 109/131 (83%) Strand = Plus / Minus Query: 280 tagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgcttg 339 ||||| ||||||||||| || || || | ||| |||||| | | ||||||||| |||||| Sbjct: 1606 tagtcggcagtccagctttgttcgacaacctcgcggactcttctgttgtactcgcgcttg 1547 Query: 340 ttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacac 399 | ||||||||||||| ||||||||||||||||| ||||| || || || |||||||| Sbjct: 1546 ctttcactgaacattcgtgcagcttccgaatttgcaggagaattcggattaggatcacat 1487 Query: 400 agcaaggactg 410 ||||| ||||| Sbjct: 1486 agcaatgactg 1476 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 439 tatatagggctccactggttctgtagaatatccaagcagatgctcccatctgcataaact 498 ||||| || ||||| ||||| || ||||| |||||||| || |||||||| ||||||||| Sbjct: 1293 tatattggactccattggttttggagaatgtccaagcatatactcccatcagcataaact 1234 Query: 499 gca 501 ||| Sbjct: 1233 gca 1231
>ref|NM_125648.3| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT5G62540 mRNA, complete cds Length = 877 Score = 71.9 bits (36), Expect = 3e-09 Identities = 162/204 (79%) Strand = Plus / Minus Query: 293 agctctgctccacgatctcacggactttacggttgtactctcgcttgttctcactgaaca 352 ||||||||||||||||||| ||||| | ||| || |||| || ||||||||||||| Sbjct: 715 agctctgctccacgatctcgattactttcctgttatattctcttttattctcactgaaca 656 Query: 353 ttctggcagcttccgaatttgctggagagttggggtttggatcacacagcaaggactgaa 412 || ||||| || | || ||||| |||| |||||||| ||||| ||||| ||||||| Sbjct: 655 accttgcagcctctgcgttcgctggtgagtcagggtttgggtcacagagcaaagactgaa 596 Query: 413 tagaagtcaatatggcagcaacgtcatatatagggctccactggttctgtagaatatcca 472 | || || | | ||||||||||| || || |||||||||||||| || | ||||||| Sbjct: 595 ttgatgtgagaactgcagcaacgtcgtagatggggctccactggttttgcaagatatcca 536 Query: 473 agcagatgctcccatctgcataaa 496 |||| ||||| ||||| ||||||| Sbjct: 535 agcaaatgcttccatcagcataaa 512
>gb|AY039851.1| Arabidopsis thaliana AT5g62540/K19B1_15 mRNA, complete cds Length = 716 Score = 71.9 bits (36), Expect = 3e-09 Identities = 162/204 (79%) Strand = Plus / Minus Query: 293 agctctgctccacgatctcacggactttacggttgtactctcgcttgttctcactgaaca 352 ||||||||||||||||||| ||||| | ||| || |||| || ||||||||||||| Sbjct: 559 agctctgctccacgatctcgattactttcctgttatattctcttttattctcactgaaca 500 Query: 353 ttctggcagcttccgaatttgctggagagttggggtttggatcacacagcaaggactgaa 412 || ||||| || | || ||||| |||| |||||||| ||||| ||||| ||||||| Sbjct: 499 accttgcagcctctgcgttcgctggtgagtcagggtttgggtcacagagcaaagactgaa 440 Query: 413 tagaagtcaatatggcagcaacgtcatatatagggctccactggttctgtagaatatcca 472 | || || | | ||||||||||| || || |||||||||||||| || | ||||||| Sbjct: 439 ttgatgtgagaactgcagcaacgtcgtagatggggctccactggttttgcaagatatcca 380 Query: 473 agcagatgctcccatctgcataaa 496 |||| ||||| ||||| ||||||| Sbjct: 379 agcaaatgcttccatcagcataaa 356
>emb|BX833570.1|CNS09ZB5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL62ZG05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 781 Score = 71.9 bits (36), Expect = 3e-09 Identities = 162/204 (79%) Strand = Plus / Minus Query: 293 agctctgctccacgatctcacggactttacggttgtactctcgcttgttctcactgaaca 352 ||||||||||||||||||| ||||| | ||| || |||| || ||||||||||||| Sbjct: 632 agctctgctccacgatctcgattactttcctgttatattctcttttattctcactgaaca 573 Query: 353 ttctggcagcttccgaatttgctggagagttggggtttggatcacacagcaaggactgaa 412 || ||||| || | || ||||| |||| |||||||| ||||| ||||| ||||||| Sbjct: 572 accttgcagcctctgcgttcgctggtgagtcagggtttgggtcacagagcaaagactgaa 513 Query: 413 tagaagtcaatatggcagcaacgtcatatatagggctccactggttctgtagaatatcca 472 | || || | | ||||||||||| || || |||||||||||||| || | ||||||| Sbjct: 512 ttgatgtgagaactgcagcaacgtcgtagatggggctccactggttttgcaagatatcca 453 Query: 473 agcagatgctcccatctgcataaa 496 |||| ||||| ||||| ||||||| Sbjct: 452 agcaaatgcttccatcagcataaa 429
>emb|BX832888.1|CNS09YZQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL1ZD01 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 693 Score = 71.9 bits (36), Expect = 3e-09 Identities = 162/204 (79%) Strand = Plus / Minus Query: 293 agctctgctccacgatctcacggactttacggttgtactctcgcttgttctcactgaaca 352 ||||||||||||||||||| ||||| | ||| || |||| || ||||||||||||| Sbjct: 531 agctctgctccacgatctcgattactttcctgttatattctcttttattctcactgaaca 472 Query: 353 ttctggcagcttccgaatttgctggagagttggggtttggatcacacagcaaggactgaa 412 || ||||| || | || ||||| |||| |||||||| ||||| ||||| ||||||| Sbjct: 471 accttgcagcctctgcgttcgctggtgagtcagggtttgggtcacagagcaaagactgaa 412 Query: 413 tagaagtcaatatggcagcaacgtcatatatagggctccactggttctgtagaatatcca 472 | || || | | ||||||||||| || || |||||||||||||| || | ||||||| Sbjct: 411 ttgatgtgagaactgcagcaacgtcgtagatggggctccactggttttgcaagatatcca 352 Query: 473 agcagatgctcccatctgcataaa 496 |||| ||||| ||||| ||||||| Sbjct: 351 agcaaatgcttccatcagcataaa 328
>emb|BX833841.1|CNS09YNI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL7ZA01 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 695 Score = 71.9 bits (36), Expect = 3e-09 Identities = 162/204 (79%) Strand = Plus / Minus Query: 293 agctctgctccacgatctcacggactttacggttgtactctcgcttgttctcactgaaca 352 ||||||||||||||||||| ||||| | ||| || |||| || ||||||||||||| Sbjct: 533 agctctgctccacgatctcgattactttcctgttatattctcttttattctcactgaaca 474 Query: 353 ttctggcagcttccgaatttgctggagagttggggtttggatcacacagcaaggactgaa 412 || ||||| || | || ||||| |||| |||||||| ||||| ||||| ||||||| Sbjct: 473 accttgcagcctctgcgttcgctggtgagtcagggtttgggtcacagagcaaagactgaa 414 Query: 413 tagaagtcaatatggcagcaacgtcatatatagggctccactggttctgtagaatatcca 472 | || || | | ||||||||||| || || |||||||||||||| || | ||||||| Sbjct: 413 ttgatgtgagaactgcagcaacgtcgtagatggggctccactggttttgcaagatatcca 354 Query: 473 agcagatgctcccatctgcataaa 496 |||| ||||| ||||| ||||||| Sbjct: 353 agcaaatgcttccatcagcataaa 330
>gb|AY085367.1| Arabidopsis thaliana clone 148141 mRNA, complete sequence Length = 682 Score = 71.9 bits (36), Expect = 3e-09 Identities = 162/204 (79%) Strand = Plus / Minus Query: 293 agctctgctccacgatctcacggactttacggttgtactctcgcttgttctcactgaaca 352 ||||||||||||||||||| ||||| | ||| || |||| || ||||||||||||| Sbjct: 557 agctctgctccacgatctcgattactttcctgttatattctcttttattctcactgaaca 498 Query: 353 ttctggcagcttccgaatttgctggagagttggggtttggatcacacagcaaggactgaa 412 || ||||| || | || ||||| |||| |||||||| ||||| ||||| ||||||| Sbjct: 497 accttgcagcctctgcgttcgctggtgagtcagggtttgggtcacagagcaaagactgaa 438 Query: 413 tagaagtcaatatggcagcaacgtcatatatagggctccactggttctgtagaatatcca 472 | || || | | ||||||||||| || || |||||||||||||| || | ||||||| Sbjct: 437 ttgatgtgagaactgcagcaacgtcgtagatggggctccactggttttgcaagatatcca 378 Query: 473 agcagatgctcccatctgcataaa 496 |||| ||||| ||||| ||||||| Sbjct: 377 agcaaatgcttccatcagcataaa 354
>gb|DQ027018.1| Arabidopsis thaliana ubiquitinating enzyme (At5g62540) mRNA, complete cds Length = 453 Score = 71.9 bits (36), Expect = 3e-09 Identities = 162/204 (79%) Strand = Plus / Minus Query: 293 agctctgctccacgatctcacggactttacggttgtactctcgcttgttctcactgaaca 352 ||||||||||||||||||| ||||| | ||| || |||| || ||||||||||||| Sbjct: 445 agctctgctccacgatctcgattactttcctgttatattctcttttattctcactgaaca 386 Query: 353 ttctggcagcttccgaatttgctggagagttggggtttggatcacacagcaaggactgaa 412 || ||||| || | || ||||| |||| |||||||| ||||| ||||| ||||||| Sbjct: 385 accttgcagcctctgcgttcgctggtgagtcagggtttgggtcacagagcaaagactgaa 326 Query: 413 tagaagtcaatatggcagcaacgtcatatatagggctccactggttctgtagaatatcca 472 | || || | | ||||||||||| || || |||||||||||||| || | ||||||| Sbjct: 325 ttgatgtgagaactgcagcaacgtcgtagatggggctccactggttttgcaagatatcca 266 Query: 473 agcagatgctcccatctgcataaa 496 |||| ||||| ||||| ||||||| Sbjct: 265 agcaaatgcttccatcagcataaa 242
>dbj|AB015469.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K19B1 Length = 69927 Score = 69.9 bits (35), Expect = 1e-08 Identities = 65/75 (86%) Strand = Plus / Minus Query: 427 gcagcaacgtcatatatagggctccactggttctgtagaatatccaagcagatgctccca 486 ||||||||||| || || |||||||||||||| || | ||||||||||| ||||| ||| Sbjct: 44954 gcagcaacgtcgtagatggggctccactggttttgcaagatatccaagcaaatgcttcca 44895 Query: 487 tctgcataaactgca 501 || |||||||||||| Sbjct: 44894 tcagcataaactgca 44880
>gb|L19352.1|ATHUBIQUB Arabidopsis thaliana 16kDa ubiquitin conjugating enzyme (UBC3) gene, complete cds and flanking regions Length = 2342 Score = 69.9 bits (35), Expect = 1e-08 Identities = 65/75 (86%) Strand = Plus / Minus Query: 427 gcagcaacgtcatatatagggctccactggttctgtagaatatccaagcagatgctccca 486 ||||||||||| || || |||||||||||||| || | ||||||||||| ||||| ||| Sbjct: 1687 gcagcaacgtcgtagatggggctccactggttttgcaagatatccaagcaaatgcttcca 1628 Query: 487 tctgcataaactgca 501 || |||||||||||| Sbjct: 1627 tcagcataaactgca 1613
>gb|AY143805.1| Arabidopsis thaliana At5g62540/K19B1_15 mRNA, complete cds Length = 441 Score = 65.9 bits (33), Expect = 2e-07 Identities = 126/157 (80%) Strand = Plus / Minus Query: 340 ttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacac 399 ||||||||||||| || ||||| || | || ||||| |||| |||||||| ||||| Sbjct: 398 ttctcactgaacaaccttgcagcctctgcgttcgctggtgagtcagggtttgggtcacag 339 Query: 400 agcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttc 459 ||||| |||||||| || || | | ||||||||||| || || |||||||||||||| Sbjct: 338 agcaaagactgaattgatgtgagaactgcagcaacgtcgtagatggggctccactggttt 279 Query: 460 tgtagaatatccaagcagatgctcccatctgcataaa 496 || | ||||||||||| ||||| ||||| ||||||| Sbjct: 278 tgcaagatatccaagcaaatgcttccatcagcataaa 242
>gb|AY048267.1| Arabidopsis thaliana AT5g62540/K19B1_15 mRNA, complete cds Length = 819 Score = 65.9 bits (33), Expect = 2e-07 Identities = 126/157 (80%) Strand = Plus / Minus Query: 340 ttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacac 399 ||||||||||||| || ||||| || | || ||||| |||| |||||||| ||||| Sbjct: 668 ttctcactgaacaaccttgcagcctctgcgttcgctggtgagtcagggtttgggtcacag 609 Query: 400 agcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttc 459 ||||| |||||||| || || | | ||||||||||| || || |||||||||||||| Sbjct: 608 agcaaagactgaattgatgtgagaactgcagcaacgtcgtagatggggctccactggttt 549 Query: 460 tgtagaatatccaagcagatgctcccatctgcataaa 496 || | ||||||||||| ||||| ||||| ||||||| Sbjct: 548 tgcaagatatccaagcaaatgcttccatcagcataaa 512
>gb|DQ200366.1| Solanum tuberosum clone 055E08 ubiquitin-conjugating enzyme-like protein mRNA, complete cds Length = 807 Score = 61.9 bits (31), Expect = 3e-06 Identities = 79/95 (83%) Strand = Plus / Minus Query: 361 gcttccgaatttgctggagagttggggtttggatcacacagcaaggactgaatagaagtc 420 ||||| ||||| ||||| || |||||||||||||||| || || ||||| || ||||| Sbjct: 452 gcttctgaattagctggcgaattggggtttggatcactgagtaaagactgtattgaagta 393 Query: 421 aatatggcagcaacgtcatatatagggctccactg 455 | ||| ||||| || ||||||||||| |||||||| Sbjct: 392 agtatagcagctacatcatatataggactccactg 358
>ref|XM_638368.1| Dictyostelium discoideum hypothetical protein (DDB0202520), partial mRNA Length = 459 Score = 48.1 bits (24), Expect = 0.039 Identities = 30/32 (93%) Strand = Plus / Minus Query: 367 gaatttgctggagagttggggtttggatcaca 398 ||||||||||||||||| || ||||||||||| Sbjct: 374 gaatttgctggagagtttggatttggatcaca 343
>gb|AC116960.2| Dictyostelium discoideum chromosome 2 map complement(1004496-821614) strain AX4, complete sequence Length = 182870 Score = 48.1 bits (24), Expect = 0.039 Identities = 30/32 (93%) Strand = Plus / Minus Query: 367 gaatttgctggagagttggggtttggatcaca 398 ||||||||||||||||| || ||||||||||| Sbjct: 144150 gaatttgctggagagtttggatttggatcaca 144119
>ref|XM_390981.1| Gibberella zeae PH-1 chromosome 3 UBC1_COLGL Ubiquitin-conjugating enzyme E2-16 kDa (Ubiquitin-protein ligase) (Ubiquitin carrier protein) (Colletotrichum hard-s> (FG10805.1) partial mRNA Length = 420 Score = 46.1 bits (23), Expect = 0.16 Identities = 35/39 (89%) Strand = Plus / Minus Query: 444 agggctccactggttctgtagaatatccaagcagatgct 482 |||||||||||||| | |||||||||||||||||||| Sbjct: 261 agggctccactggtcacggagaatatccaagcagatgct 223
>ref|XM_790883.1| PREDICTED: Strongylocentrotus purpuratus similar to Ubiquitin-conjugating enzyme E2 A (Ubiquitin-protein ligase A) (Ubiquitin carrier protein A) (HR6A) (mHR6A) (LOC591316), mRNA Length = 426 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 457 ttctgtagaatatccaagcagat 479 ||||||||||||||||||||||| Sbjct: 242 ttctgtagaatatccaagcagat 220
>emb|AL512631.11| Human DNA sequence from clone RP11-138I18 on chromosome 10 Contains the 5' end of the gene for a protein related to the N terminus of tre (RNTRE) (KIAA0019) and a CpG island, complete sequence Length = 142863 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 591 catggaataagagagatggata 612 |||||||||||||||||||||| Sbjct: 32049 catggaataagagagatggata 32070
>emb|AL079338.16|HSJ841K13 Human DNA sequence from clone RP5-841K13 on chromosome 20 Contains part of the gene for a novel protein (LOC284776), complete sequence Length = 122466 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 525 acttctcccgaacatcaattta 546 |||||||||||||||||||||| Sbjct: 118379 acttctcccgaacatcaattta 118358
>emb|BX821042.1|CNS0AA78 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH94ZD08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 825 Score = 44.1 bits (22), Expect = 0.62 Identities = 106/134 (79%) Strand = Plus / Minus Query: 343 tcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacacagc 402 ||||||||||||| ||||| ||||||| ||| ||||| | || || |||||||| ||| Sbjct: 587 tcactgaacattcgtgcagcgtccgaatgtgcaggagaatgcggattaggatcacatagc 528 Query: 403 aaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttctgt 462 || |||||| | || || | ||| |||||||| || ||||| || || || ||||| || Sbjct: 527 aatgactgagtggaggtgagtatagcagcaacatcgtatatgggactgcattggttttgg 468 Query: 463 agaatatccaagca 476 ||||| | |||||| Sbjct: 467 agaatgtgcaagca 454
>gb|AC006198.1|AC006198 Homo sapiens, clone hRPK.3_A_1, complete sequence Length = 163410 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 525 acttctcccgaacatcaattta 546 |||||||||||||||||||||| Sbjct: 2271 acttctcccgaacatcaattta 2292
>dbj|AP001930.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-669L23, complete sequences Length = 167117 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 557 aattactcagtaagatatgaaa 578 |||||||||||||||||||||| Sbjct: 66953 aattactcagtaagatatgaaa 66932
>ref|XM_420612.1| PREDICTED: Gallus gallus similar to UDP-glucuronosyltransferase 2A1 precursor, microsomal (LOC422658), mRNA Length = 1157 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 612 agacagtaagaaagaaggtat 632 ||||||||||||||||||||| Sbjct: 255 agacagtaagaaagaaggtat 275
>gb|AC067793.9| Homo sapiens chromosome 15, clone RP11-552D14, complete sequence Length = 189722 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 49 atgcccctaaattcacaagga 69 ||||||||||||||||||||| Sbjct: 118733 atgcccctaaattcacaagga 118713
>emb|AL672036.6| Mouse DNA sequence from clone RP23-395P1 on chromosome X, complete sequence Length = 186034 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 182 tttaatgtttcatctgagaaa 202 ||||||||||||||||||||| Sbjct: 145117 tttaatgtttcatctgagaaa 145137
>emb|AL669976.11| Mouse DNA sequence from clone RP23-15J3 on chromosome X, complete sequence Length = 227762 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 652 agagatgggtacaaatacata 672 ||||||||||||||||||||| Sbjct: 87265 agagatgggtacaaatacata 87285
>gb|AC147651.4| Homo sapiens BAC clone RP13-689E11 from 7, complete sequence Length = 162139 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 508 tagcaagatgttaaaccact 527 |||||||||||||||||||| Sbjct: 74887 tagcaagatgttaaaccact 74868
>emb|CR352236.17| Zebrafish DNA sequence from clone DKEYP-123E12 in linkage group 23, complete sequence Length = 178472 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 602 agagatggatagacagtaagaaagaagg 629 ||||||||||||| || ||||||||||| Sbjct: 46036 agagatggatagaaaggaagaaagaagg 46009
>emb|CR457456.7| Zebrafish DNA sequence from clone CH211-235F6 in linkage group 23, complete sequence Length = 146468 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 tgtttaatgtttcatctgag 199 |||||||||||||||||||| Sbjct: 11394 tgtttaatgtttcatctgag 11413
>gb|AC111092.10| Mus musculus chromosome 12, clone RP23-168O9, complete sequence Length = 211926 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 agtcagcagtccagctctgc 300 |||||||||||||||||||| Sbjct: 81299 agtcagcagtccagctctgc 81318
>emb|AL353680.8| Human DNA sequence from clone RP11-252M21 on chromosome 13 Contains a novel FLJ31073 containing gene, six novel genes and a CpG island, complete sequence Length = 176930 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 472 aagcagatgctcccatctgc 491 |||||||||||||||||||| Sbjct: 116720 aagcagatgctcccatctgc 116739
>ref|NM_001030898.1| Gallus gallus similar to colony stimulating factor 3 receptor isoform c precursor; granulocyte colony stimulating factor receptor; CD114 antigen (LOC419620), mRNA Length = 2916 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 gcagtccagctctgctccac 305 |||||||||||||||||||| Sbjct: 85 gcagtccagctctgctccac 66
>emb|AJ851515.1| Gallus gallus mRNA for hypothetical protein, clone 4d22 Length = 2916 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 gcagtccagctctgctccac 305 |||||||||||||||||||| Sbjct: 85 gcagtccagctctgctccac 66
>gb|AC154826.2| Mus musculus BAC clone RP23-72D18 from chromosome 9, complete sequence Length = 150028 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 caactttctggcaatggccc 266 |||||||||||||||||||| Sbjct: 73341 caactttctggcaatggccc 73322
>gb|AC025775.6| Homo sapiens chromosome 5 clone CTD-2299B9, complete sequence Length = 95782 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 tggggtttggatcacacagc 402 |||||||||||||||||||| Sbjct: 64899 tggggtttggatcacacagc 64918
>dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome Length = 2088737 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 382 ttggggtttggatcacacag 401 |||||||||||||||||||| Sbjct: 1514495 ttggggtttggatcacacag 1514476
>gb|AC155278.5| Mus musculus 6 BAC RP24-141E2 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 202028 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 atgtttaatgtttcatctga 198 |||||||||||||||||||| Sbjct: 200659 atgtttaatgtttcatctga 200678
>gb|AC119939.14| Mus musculus chromosome 5, clone RP24-267A23, complete sequence Length = 180700 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 672 agtgggagagattactattt 691 |||||||||||||||||||| Sbjct: 131210 agtgggagagattactattt 131191
>dbj|AB017065.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MFC16 Length = 61290 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 taaattcacaaggacaggca 75 |||||||||||||||||||| Sbjct: 3083 taaattcacaaggacaggca 3064
>gb|AC007514.5|AC007514 Homo sapiens chromosome 14 clone BACs 209A20 and 396N8 map 14q31, complete sequence Length = 177720 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 603 gagatggatagacagtaagaaaga 626 ||||||||| |||||||||||||| Sbjct: 143518 gagatggatggacagtaagaaaga 143495
>gb|AC131338.4| Mus musculus BAC clone RP23-29O10 from 18, complete sequence Length = 203229 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tggagatgtttaatgtttca 193 |||||||||||||||||||| Sbjct: 41793 tggagatgtttaatgtttca 41774
>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome Length = 2702173 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 cgatctcacggactttacgg 324 |||||||||||||||||||| Sbjct: 1214288 cgatctcacggactttacgg 1214269
>gb|AC153621.5| Mus musculus 6 BAC RP23-272K20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 215547 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 atgtttaatgtttcatctga 198 |||||||||||||||||||| Sbjct: 204334 atgtttaatgtttcatctga 204315
>gb|AC175246.2| Mus musculus chromosome 1, clone wi1-1101A21, complete sequence Length = 40682 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 503 agatgtagcaagatgttaaa 522 |||||||||||||||||||| Sbjct: 28366 agatgtagcaagatgttaaa 28347
>gb|AC159324.2| Mus musculus BAC clone RP23-9D1 from chromosome 12, complete sequence Length = 207280 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 agtcagcagtccagctctgc 300 |||||||||||||||||||| Sbjct: 183532 agtcagcagtccagctctgc 183551
>emb|BX294005.7| Mouse DNA sequence from clone RP23-132O17 on chromosome X, complete sequence Length = 116919 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 662 acaaatacatagtgggagagatta 685 ||||||||| |||||||||||||| Sbjct: 79827 acaaatacaaagtgggagagatta 79850
>gb|AC174761.1| Gasterosteus aculeatus clone VMRC26-231K14, complete sequence Length = 162397 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 cccccttcccctgccttagt 283 |||||||||||||||||||| Sbjct: 139549 cccccttcccctgccttagt 139568
>dbj|AP003041.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-567M21, complete sequence Length = 188172 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 ttctgtagaatatccaagca 476 |||||||||||||||||||| Sbjct: 147522 ttctgtagaatatccaagca 147503
>emb|AL844609.6| Mouse DNA sequence from clone RP23-356F8 on chromosome 4, complete sequence Length = 191676 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 591 catggaataagagagatgga 610 |||||||||||||||||||| Sbjct: 133284 catggaataagagagatgga 133303 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,229,206 Number of Sequences: 3902068 Number of extensions: 6229206 Number of successful extensions: 117866 Number of sequences better than 10.0: 107 Number of HSP's better than 10.0 without gapping: 107 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 117468 Number of HSP's gapped (non-prelim): 392 length of query: 703 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 680 effective length of database: 17,143,297,704 effective search space: 11657442438720 effective search space used: 11657442438720 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
