ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd27b07 |
|---|---|
| Clone Library Name | barley_pub |
>AFC2_ARATH (P51567) Serine/threonine-protein kinase AFC2 (EC 2.7.12.1)| Length = 427 Score = 125 bits (313), Expect = 1e-28 Identities = 53/80 (66%), Positives = 73/80 (91%) Frame = -1 Query: 636 PLPRHMLERADHHAQKYIRRGRLNWPEGATTRESMRAVLKLPRLQNLVMQHVDHSAGDLI 457 P P+ ML++ D H++KY+RRGRL+WP+GAT+R+S++AVLKLPRLQNL+MQHVDHSAG+LI Sbjct: 338 PFPQQMLKKVDRHSEKYVRRGRLDWPDGATSRDSLKAVLKLPRLQNLIMQHVDHSAGELI 397 Query: 456 GLLQGLLAYEPSARLTAQEA 397 ++QGLL ++PS R+TA+EA Sbjct: 398 NMVQGLLRFDPSERITAREA 417
>AFC1_ARATH (P51566) Serine/threonine-protein kinase AFC1 (EC 2.7.12.1)| Length = 467 Score = 115 bits (288), Expect = 1e-25 Identities = 55/81 (67%), Positives = 68/81 (83%), Gaps = 1/81 (1%) Frame = -1 Query: 636 PLPRHMLERADHHAQKYIRRG-RLNWPEGATTRESMRAVLKLPRLQNLVMQHVDHSAGDL 460 PLP HM+ RAD ++KY RRG +L+WPEGAT+R+S++AV KLPRL NL+MQHVDHSAGDL Sbjct: 357 PLPPHMVLRADRRSEKYFRRGAKLDWPEGATSRDSLKAVWKLPRLPNLIMQHVDHSAGDL 416 Query: 459 IGLLQGLLAYEPSARLTAQEA 397 I LLQGLL Y+P+ R A+EA Sbjct: 417 IDLLQGLLRYDPTERFKAREA 437
>AFC3_ARATH (P51568) Serine/threonine-protein kinase AFC3 (EC 2.7.12.1)| Length = 400 Score = 96.7 bits (239), Expect = 5e-20 Identities = 48/81 (59%), Positives = 60/81 (74%), Gaps = 1/81 (1%) Frame = -1 Query: 636 PLPRHMLERADHHAQKYIRRG-RLNWPEGATTRESMRAVLKLPRLQNLVMQHVDHSAGDL 460 PLP HM +A A+KY RRG RLNWPEGA +RES+RAV +L RL+++V +HVD++ Sbjct: 310 PLPEHMTRKASRGAEKYFRRGCRLNWPEGANSRESIRAVKRLDRLKDMVSKHVDNTRSRF 369 Query: 459 IGLLQGLLAYEPSARLTAQEA 397 LL GLLAY+PS RLTA EA Sbjct: 370 ADLLYGLLAYDPSERLTANEA 390
>CLK1_HUMAN (P49759) Dual specificity protein kinase CLK1 (EC 2.7.12.1)| (CDC-like kinase 1) Length = 484 Score = 47.4 bits (111), Expect = 4e-05 Identities = 26/80 (32%), Positives = 45/80 (56%) Frame = -1 Query: 636 PLPRHMLERADHHAQKYIRRGRLNWPEGATTRESMRAVLKLPRLQNLVMQHVDHSAGDLI 457 PLP+HM+++ +KY RL+W E ++ + K P + ++ Q V+H L Sbjct: 397 PLPKHMIQKT--RKRKYFHHDRLDWDEHSSAGRYVSRACK-PLKEFMLSQDVEHER--LF 451 Query: 456 GLLQGLLAYEPSARLTAQEA 397 L+Q +L Y+P+ R+T +EA Sbjct: 452 DLIQKMLEYDPAKRITLREA 471
>CLK2_MOUSE (O35491) Dual specificity protein kinase CLK2 (EC 2.7.12.1)| (CDC-like kinase 2) Length = 499 Score = 46.6 bits (109), Expect = 6e-05 Identities = 29/80 (36%), Positives = 41/80 (51%) Frame = -1 Query: 636 PLPRHMLERADHHAQKYIRRGRLNWPEGATTRESMRAVLKLPRLQNLVMQHVDHSAGDLI 457 P+P M+ + QKY RGRL+W E + +R K P + L + DH L Sbjct: 398 PVPSRMIRKT--RKQKYFYRGRLDWDENTSAGRYVRENCK-PLRRYLTSEAEDHH--QLF 452 Query: 456 GLLQGLLAYEPSARLTAQEA 397 L++ +L YEP+ RLT EA Sbjct: 453 DLIENMLEYEPAKRLTLGEA 472
>CLK2_HUMAN (P49760) Dual specificity protein kinase CLK2 (EC 2.7.12.1)| (CDC-like kinase 2) Length = 499 Score = 45.4 bits (106), Expect = 1e-04 Identities = 28/80 (35%), Positives = 41/80 (51%) Frame = -1 Query: 636 PLPRHMLERADHHAQKYIRRGRLNWPEGATTRESMRAVLKLPRLQNLVMQHVDHSAGDLI 457 P+P M+ + QKY RGRL+W E + +R K P + L + +H L Sbjct: 399 PIPSRMIRKT--RKQKYFYRGRLDWDENTSAGRYVRENCK-PLRRYLTSEAEEHH--QLF 453 Query: 456 GLLQGLLAYEPSARLTAQEA 397 L++ +L YEP+ RLT EA Sbjct: 454 DLIESMLEYEPAKRLTLGEA 473
>CLK4_HUMAN (Q9HAZ1) Dual specificity protein kinase CLK4 (EC 2.7.12.1)| (CDC-like kinase 4) Length = 481 Score = 40.4 bits (93), Expect = 0.004 Identities = 23/80 (28%), Positives = 43/80 (53%) Frame = -1 Query: 636 PLPRHMLERADHHAQKYIRRGRLNWPEGATTRESMRAVLKLPRLQNLVMQHVDHSAGDLI 457 P+P+HM+++ +KY +L+W E ++ +R K L+ ++ H D L Sbjct: 395 PIPQHMIQKT--RKRKYFHHNQLDWDEHSSAGRYVRRRCK--PLKEFMLCH-DEEHEKLF 449 Query: 456 GLLQGLLAYEPSARLTAQEA 397 L++ +L Y+P+ R+T EA Sbjct: 450 DLVRRMLEYDPTQRITLDEA 469
>CLK3_RAT (Q63117) Dual specificity protein kinase CLK3 (EC 2.7.12.1)| (CDC-like kinase 3) Length = 490 Score = 40.0 bits (92), Expect = 0.006 Identities = 24/80 (30%), Positives = 41/80 (51%) Frame = -1 Query: 636 PLPRHMLERADHHAQKYIRRGRLNWPEGATTRESMRAVLKLPRLQNLVMQHVDHSAGDLI 457 P+P HM+ R QKY +G L W E ++ ++ K P ++ ++H L Sbjct: 392 PIPSHMIHRT--RKQKYFYKGGLVWDENSSDGRYVKENCK-PLKSYMLQDSLEHV--QLF 446 Query: 456 GLLQGLLAYEPSARLTAQEA 397 L++ +L ++PS R+T EA Sbjct: 447 DLMRRMLEFDPSQRITLAEA 466
>CLK1_MOUSE (P22518) Dual specificity protein kinase CLK1 (EC 2.7.12.1)| (CDC-like kinase 1) (Protein kinase STY) Length = 483 Score = 40.0 bits (92), Expect = 0.006 Identities = 23/80 (28%), Positives = 43/80 (53%) Frame = -1 Query: 636 PLPRHMLERADHHAQKYIRRGRLNWPEGATTRESMRAVLKLPRLQNLVMQHVDHSAGDLI 457 PLP+HM+++ ++Y RL+W E ++ + K P + ++ Q +H L Sbjct: 396 PLPKHMIQKT--RKRRYFHHDRLDWDEHSSAGRYVSRRCK-PLKEFMLSQDAEHEF--LF 450 Query: 456 GLLQGLLAYEPSARLTAQEA 397 L+ +L Y+P+ R+T +EA Sbjct: 451 DLVGKILEYDPAKRITLKEA 470
>CLK4_MOUSE (O35493) Dual specificity protein kinase CLK4 (EC 2.7.12.1)| (CDC-like kinase 4) Length = 481 Score = 39.7 bits (91), Expect = 0.008 Identities = 23/80 (28%), Positives = 42/80 (52%) Frame = -1 Query: 636 PLPRHMLERADHHAQKYIRRGRLNWPEGATTRESMRAVLKLPRLQNLVMQHVDHSAGDLI 457 P+P HM+++ +KY +L+W E ++ +R K L+ ++ H D L Sbjct: 395 PIPAHMIQKT--RKRKYFHHNQLDWDEHSSAGRYVRRRCK--PLKEFMLCH-DEEHEKLF 449 Query: 456 GLLQGLLAYEPSARLTAQEA 397 L++ +L Y+P+ R+T EA Sbjct: 450 DLVRRMLEYDPARRITLDEA 469
>CLK3_MOUSE (O35492) Dual specificity protein kinase CLK3 (EC 2.7.12.1)| (CDC-like kinase 3) Length = 490 Score = 38.9 bits (89), Expect = 0.013 Identities = 23/80 (28%), Positives = 41/80 (51%) Frame = -1 Query: 636 PLPRHMLERADHHAQKYIRRGRLNWPEGATTRESMRAVLKLPRLQNLVMQHVDHSAGDLI 457 P+P HM+ R QKY +G L W E ++ ++ K P ++ ++H L Sbjct: 392 PIPSHMIHRT--RKQKYFYKGGLVWDENSSDGRYVKENCK-PLKSYMLQDSLEHV--QLF 446 Query: 456 GLLQGLLAYEPSARLTAQEA 397 L++ +L ++P+ R+T EA Sbjct: 447 DLMRRMLEFDPAQRITLAEA 466
>CLK3_HUMAN (P49761) Dual specificity protein kinase CLK3 (EC 2.7.12.1)| (CDC-like kinase 3) Length = 490 Score = 38.9 bits (89), Expect = 0.013 Identities = 23/80 (28%), Positives = 41/80 (51%) Frame = -1 Query: 636 PLPRHMLERADHHAQKYIRRGRLNWPEGATTRESMRAVLKLPRLQNLVMQHVDHSAGDLI 457 P+P HM+ R QKY +G L W E ++ ++ K P ++ ++H L Sbjct: 392 PIPSHMIHRT--RKQKYFYKGGLVWDENSSDGRYVKENCK-PLKSYMLQDSLEHV--QLF 446 Query: 456 GLLQGLLAYEPSARLTAQEA 397 L++ +L ++P+ R+T EA Sbjct: 447 DLMRRMLEFDPAQRITLAEA 466
>LKH1_SCHPO (Q10156) Dual specificity protein kinase lkh1 (EC 2.7.12.1)| Length = 575 Score = 38.1 bits (87), Expect = 0.022 Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 1/81 (1%) Frame = -1 Query: 636 PLPRHMLERADHHAQKYIRR-GRLNWPEGATTRESMRAVLKLPRLQNLVMQHVDHSAGDL 460 P R+M+ R+ +Q++ + G++ +P T ++S+ + L L+ + A L Sbjct: 482 PFDRNMISRSSRTSQRFFKSDGKVRYPLSNTPKKSINYLQSLQTLEQIFAVSSPEVAL-L 540 Query: 459 IGLLQGLLAYEPSARLTAQEA 397 + LL+ + Y+P R+TA+EA Sbjct: 541 LDLLKKVFVYDPKRRITAKEA 561
>DOA_DROME (P49762) Serine/threonine-protein kinase Doa (EC 2.7.12.1) (Protein| darkener of apricot) Length = 832 Score = 35.4 bits (80), Expect = 0.14 Identities = 22/65 (33%), Positives = 34/65 (52%) Frame = -1 Query: 591 KYIRRGRLNWPEGATTRESMRAVLKLPRLQNLVMQHVDHSAGDLIGLLQGLLAYEPSARL 412 KY G+L+W E ++ +R K P + DH +L L++ +L YEPS+R+ Sbjct: 732 KYFYHGKLDWDEKSSAGRYVRDHCK-PLFLCQLSDSEDHC--ELFSLIKKMLEYEPSSRI 788 Query: 411 TAQEA 397 T EA Sbjct: 789 TLGEA 793
>CD5R2_MOUSE (O35926) Cyclin-dependent kinase 5 activator 2 precursor (CDK5| activator 2) (Cyclin-dependent kinase 5 regulatory subunit 2) (P39) (P39I) Length = 369 Score = 33.9 bits (76), Expect = 0.42 Identities = 25/83 (30%), Positives = 34/83 (40%), Gaps = 2/83 (2%) Frame = -3 Query: 610 SRPPCAEVHQKRKVELARRCNDTREHESCSQAASPPEPGDAACGSLCRGPD--RAAAGPP 437 S P V Q+ + L R+ D + ++ + P P + C P AAA PP Sbjct: 89 STGPDPLVQQRNRENLLRKGRDGPDGGGTAKPLAVPVPTVPTTAATCEPPSGGSAAAPPP 148 Query: 436 GIRAFGQADRPGSPEPPLLQAAP 368 G +P P PP QAAP Sbjct: 149 G----SGGGKPPPPPPPAPQAAP 167
>YT35_STRFR (P20186) Hypothetical 35.5 kDa protein in transposon Tn4556| Length = 348 Score = 33.5 bits (75), Expect = 0.54 Identities = 23/84 (27%), Positives = 30/84 (35%) Frame = -3 Query: 619 AGKSRPPCAEVHQKRKVELARRCNDTREHESCSQAASPPEPGDAACGSLCRGPDRAAAGP 440 + ++R P V K LA RC+ +R C AA P S P AA Sbjct: 195 SSETRSPGGTVQPKSPAPLAARCSASR--AGCPTAAGSLLPAPRPPASSASSPQAAAPAA 252 Query: 439 PGIRAFGQADRPGSPEPPLLQAAP 368 P + P +P P A P Sbjct: 253 PSATRLPRRTTPSAPRPSSRPARP 276
>CDK7_HUMAN (P50613) Cell division protein kinase 7 (EC 2.7.11.22) (EC| 2.7.11.23) (CDK-activating kinase) (CAK) (TFIIH basal transcription factor complex kinase subunit) (39 kDa protein kinase) (P39 Mo15) (STK1) (CAK1) Length = 346 Score = 33.5 bits (75), Expect = 0.54 Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 7/60 (11%) Frame = -1 Query: 555 GATTRESMRAVLKLP------RLQNLVMQHVDHSAGD-LIGLLQGLLAYEPSARLTAQEA 397 G T E + LP + + H+ +AGD L+ L+QGL + P AR+TA +A Sbjct: 230 GTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQA 289
>GCYA2_RAT (Q9WVI4) Guanylate cyclase soluble subunit alpha-2 (EC 4.6.1.2)| (GCS-alpha-2) Length = 730 Score = 33.1 bits (74), Expect = 0.71 Identities = 21/53 (39%), Positives = 24/53 (45%) Frame = -3 Query: 511 SPPEPGDAACGSLCRGPDRAAAGPPGIRAFGQADRPGSPEPPLLQAAP*KAVA 353 SP E G+ LC R+ GPPG RA A +P P AA AVA Sbjct: 22 SPEEEGECPLSKLCWNGSRSPPGPPGSRAAAMA---ATPVPAASVAAAAAAVA 71
>CAC1A_RABIT (P27884) Voltage-dependent P/Q-type calcium channel alpha-1A subunit| (Voltage-gated calcium channel alpha subunit Cav2.1) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Brain calcium channel I) (BI) Length = 2424 Score = 33.1 bits (74), Expect = 0.71 Identities = 27/102 (26%), Positives = 36/102 (35%), Gaps = 2/102 (1%) Frame = -3 Query: 613 KSRPPCAEVHQKRKVELARRCNDTREHESCSQAASPPEPGDAACGSLCRGPDRAAAGPP- 437 + PP AE K HE+ S A P P + GP A A P Sbjct: 1067 RQEPPLAEDMDNLKNSRLATAEPVSPHENLSHAGLPQSPAKMGSSTDPAGPTPATAANPQ 1126 Query: 436 -GIRAFGQADRPGSPEPPLLQAAP*KAVAMTNQ*CPWLTQTN 314 + + PG+P P P ++ +TN P QTN Sbjct: 1127 NSTASRRTPNNPGNPSNPGPPKTPENSLIVTN---PSTAQTN 1165
>CDK7_RAT (P51952) Cell division protein kinase 7 (EC 2.7.11.22) (EC| 2.7.11.23) (CDK-activating kinase) (CAK) (TFIIH basal transcription factor complex kinase subunit) (39 protein kinase) (P39 Mo15) (Fragment) Length = 329 Score = 33.1 bits (74), Expect = 0.71 Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 7/60 (11%) Frame = -1 Query: 555 GATTRESMRAVLKLP------RLQNLVMQHVDHSAGD-LIGLLQGLLAYEPSARLTAQEA 397 G T E + LP + +QH+ +AGD L+ L+QGL + P R+TA +A Sbjct: 222 GTPTEEQWPDMCSLPDYVTFKSFPGIPLQHIFIAAGDDLLELIQGLFLFNPCTRITASQA 281
>ALDH2_BOVIN (P20000) Aldehyde dehydrogenase, mitochondrial precursor (EC| 1.2.1.3) (ALDH class 2) (ALDHI) (ALDH-E2) Length = 520 Score = 32.7 bits (73), Expect = 0.93 Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 2/77 (2%) Frame = +1 Query: 385 AVAQGFLGGQPGRRLV--CQEALQQPDQVPGRVIHMLHHQVLEARQLENSSHALSCRCTF 558 A+A LG + GRRL+ +A+ P+Q P +L++Q+ + N H + TF Sbjct: 6 ALAAARLGPRQGRRLLSAATQAVPTPNQQP----EVLYNQIF----INNEWHDAVSKKTF 57 Query: 559 WPVQPSSSDVLLRMVVG 609 V PS+ DV+ + G Sbjct: 58 PTVNPSTGDVICHVAEG 74
>COJA1_HUMAN (Q14993) Collagen alpha-1(XIX) chain precursor (Collagen alpha-1(Y)| chain) Length = 1142 Score = 32.7 bits (73), Expect = 0.93 Identities = 15/31 (48%), Positives = 19/31 (61%) Frame = -3 Query: 460 DRAAAGPPGIRAFGQADRPGSPEPPLLQAAP 368 DR AGPPGI G + +PG+P PP + P Sbjct: 876 DRGPAGPPGIA--GMSGKPGAPGPPGVPGEP 904
>MAP1A_HUMAN (P78559) Microtubule-associated protein 1A (MAP 1A)| (Proliferation-related protein p80) [Contains: MAP1 light chain LC2] Length = 2805 Score = 32.3 bits (72), Expect = 1.2 Identities = 25/70 (35%), Positives = 26/70 (37%), Gaps = 19/70 (27%) Frame = -3 Query: 520 QAASPPEPGDAACGSLCRGPDRA---AAGPPGIRAFG----------------QADRPGS 398 Q SP EP A CGSL DRA A GPP + Q P S Sbjct: 2179 QXPSPAEPRSAPCGSLAFSGDRALALAPGPPTRTRYDEYLEVTKAPSLDSSLPQLPSPSS 2238 Query: 397 PEPPLLQAAP 368 P PLL P Sbjct: 2239 PGXPLLSNLP 2248
>MAP1A_RAT (P34926) Microtubule-associated protein 1A (MAP 1A) [Contains: MAP1| light chain LC2] Length = 2774 Score = 32.0 bits (71), Expect = 1.6 Identities = 24/70 (34%), Positives = 25/70 (35%), Gaps = 19/70 (27%) Frame = -3 Query: 520 QAASPPEPGDAACGSLCRGPDRAAAGPPGI-------------------RAFGQADRPGS 398 Q SP EP A CGSL DRA A PG + Q P S Sbjct: 2148 QLPSPAEPRSAPCGSLAFSGDRALALVPGTPTRTRHDEYLEVTKAPSLDSSLPQLPSPSS 2207 Query: 397 PEPPLLQAAP 368 P PLL P Sbjct: 2208 PGGPLLSNLP 2217
>PO121_MOUSE (Q8K3Z9) Nuclear envelope pore membrane protein POM 121 (Pore| membrane protein of 121 kDa) Length = 1200 Score = 31.6 bits (70), Expect = 2.1 Identities = 23/63 (36%), Positives = 25/63 (39%), Gaps = 6/63 (9%) Frame = -3 Query: 547 DTREHESCSQAASPPEPGDAACGSLCR------GPDRAAAGPPGIRAFGQADRPGSPEPP 386 D R H + ASPP GSLC GPD A G +PG PEP Sbjct: 87 DARRHPRPALTASPPPAKSPVNGSLCEPRSPLGGPDPAELLLMG----SYLGKPGPPEPA 142 Query: 385 LLQ 377 L Q Sbjct: 143 LRQ 145
>CDK7_MOUSE (Q03147) Cell division protein kinase 7 (EC 2.7.11.22) (EC| 2.7.11.23) (CDK-activating kinase) (CAK) (TFIIH basal transcription factor complex kinase subunit) (39 kDa protein kinase) (P39 Mo15) (Protein-tyrosine kinase MPK-7) (CR4 protein kinas Length = 346 Score = 31.6 bits (70), Expect = 2.1 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 7/60 (11%) Frame = -1 Query: 555 GATTRESMRAVLKLP------RLQNLVMQHVDHSAGD-LIGLLQGLLAYEPSARLTAQEA 397 G T E + LP + +QH+ +AGD L+ L+QGL + P R TA +A Sbjct: 230 GTPTEEQWPDMCSLPDYVTFKSFPGVPLQHIFIAAGDDLLELIQGLFLFNPCTRTTASQA 289
>CE110_MOUSE (Q7TSH4) Centrosomal protein of 110 kDa (Cep110 protein)| Length = 1004 Score = 31.6 bits (70), Expect = 2.1 Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 14/77 (18%) Frame = -3 Query: 556 RCNDTREHESCSQAASPPEPGDAACGS-------------LCRGPDRAAA-GPPGIRAFG 419 R ND + C + +PP P CGS L +G +A++ G G+ +F Sbjct: 261 RENDAAKASDCVKEKAPPMPIGRHCGSAIPDKPSLNKSNVLLQGASQASSMGTAGLASFS 320 Query: 418 QADRPGSPEPPLLQAAP 368 + D P PP AAP Sbjct: 321 KIDLPAGAAPP---AAP 334
>VE7_HPV70 (P50785) Protein E7| Length = 109 Score = 31.2 bits (69), Expect = 2.7 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%) Frame = +1 Query: 427 LVCQEALQQPDQVPGRVIHMLHHQV-LEARQLENSSHALSCRC 552 LVC E L+ D H+++HQ L AR+ E H + C C Sbjct: 26 LVCHEQLEDSDNETDEPDHVVNHQQQLLARREEPQRHKIQCMC 68
>CO1A2_CHICK (P02467) Collagen alpha-2(I) chain precursor (Fragments)| Length = 1362 Score = 30.8 bits (68), Expect = 3.5 Identities = 22/51 (43%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Frame = -3 Query: 517 AASPPEPGDAACGSLCRGPDRAAAGPPGIRAF-GQADRPGSPEPPLLQAAP 368 A+ PP P AA + GP R AGPPG+ F G A R G P P + P Sbjct: 759 ASGPPGPVGAAGPA---GP-RGDAGPPGMTGFPGAAGRVGPPGPAGITGPP 805
>IF2_MYCPA (Q73VV4) Translation initiation factor IF-2| Length = 925 Score = 30.4 bits (67), Expect = 4.6 Identities = 16/44 (36%), Positives = 19/44 (43%) Frame = -3 Query: 517 AASPPEPGDAACGSLCRGPDRAAAGPPGIRAFGQADRPGSPEPP 386 AA P +PG A + A A P A A PG P+PP Sbjct: 105 AAPPAQPGGTATTPAAQATPEAPARPGPAAARPSAPAPGQPKPP 148
>CXA3_SHEEP (Q9TU17) Gap junction alpha-3 protein (Connexin-44) (Cx44)| Length = 412 Score = 30.4 bits (67), Expect = 4.6 Identities = 13/24 (54%), Positives = 14/24 (58%) Frame = -3 Query: 439 PGIRAFGQADRPGSPEPPLLQAAP 368 P + GQA PG PEPPL A P Sbjct: 275 PSASSLGQASAPGYPEPPLPAALP 298
>ZEP2_HUMAN (P31629) Human immunodeficiency virus type I enhancer-binding protein| 2 (HIV-EP2) (MHC-binding protein 2) (MBP-2) Length = 2446 Score = 30.4 bits (67), Expect = 4.6 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 2/61 (3%) Frame = -2 Query: 404 RKP*ATASSG--GTVKGGRYDQPMMSVADPNKQTLTETYEDLQACSKEIASLRVLSESPS 231 R P A SSG T R + D T E E++Q C+K IASLR+ +E + Sbjct: 2285 RGPHALQSSGPPSTPSSPRLLMKQSTSEDSLNATEREQEENIQTCTKAIASLRIATEEAA 2344 Query: 230 V 228 + Sbjct: 2345 L 2345
>CO1A1_MOUSE (P11087) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 30.4 bits (67), Expect = 4.6 Identities = 20/43 (46%), Positives = 21/43 (48%), Gaps = 1/43 (2%) Frame = -3 Query: 514 ASPPEPGDAACGSLCRGPDRAAAGPPGIRAF-GQADRPGSPEP 389 A PP P +GP R AAGPPG F G A R G P P Sbjct: 836 AGPPGPIGNVGAPGPKGP-RGAAGPPGATGFPGAAGRVGPPGP 877
>PCQAP_MOUSE (Q924H2) Positive cofactor 2 glutamine/Q-rich-associated protein| (PC2 glutamine/Q-rich-associated protein) (mPcqap) Length = 792 Score = 30.0 bits (66), Expect = 6.0 Identities = 17/40 (42%), Positives = 21/40 (52%) Frame = -3 Query: 505 PEPGDAACGSLCRGPDRAAAGPPGIRAFGQADRPGSPEPP 386 P PG A G RGP ++ G G+ A GQ P S +PP Sbjct: 92 PTPGAAGIGMPPRGPGQSLGGMGGLGAMGQ-PLPLSGQPP 130
>BRD2_CANFA (Q5TJG6) Bromodomain-containing protein 2| Length = 803 Score = 30.0 bits (66), Expect = 6.0 Identities = 22/68 (32%), Positives = 29/68 (42%) Frame = -3 Query: 592 EVHQKRKVELARRCNDTREHESCSQAASPPEPGDAACGSLCRGPDRAAAGPPGIRAFGQA 413 E +KRK E R E + S+A P +P + S G A GPPG FG + Sbjct: 554 EKKKKRKAEKHRGRAGVDEDDKGSRAPRPSQPKKSKKASGSGGGSAATLGPPG---FGPS 610 Query: 412 DRPGSPEP 389 G+ P Sbjct: 611 GGSGTKLP 618
>MPK4_ARATH (Q39024) Mitogen-activated protein kinase homolog 4 (EC 2.7.11.24)| (MAP kinase 4) (AtMPK4) Length = 376 Score = 30.0 bits (66), Expect = 6.0 Identities = 18/49 (36%), Positives = 29/49 (59%) Frame = -1 Query: 543 RESMRAVLKLPRLQNLVMQHVDHSAGDLIGLLQGLLAYEPSARLTAQEA 397 R +R + + PR QN + + SAG + LL+ +L ++PS R+T EA Sbjct: 277 RRYVRQLPQYPR-QNFAARFPNMSAG-AVDLLEKMLVFDPSRRITVDEA 323
>CDK7_XENLA (P20911) Cell division protein kinase 7 (EC 2.7.11.22) (EC| 2.7.11.23) (40 kDa protein kinase) (P40 MO15) (CDC2/CDK2,4-activating kinase) Length = 352 Score = 29.6 bits (65), Expect = 7.9 Identities = 13/23 (56%), Positives = 16/23 (69%) Frame = -1 Query: 465 DLIGLLQGLLAYEPSARLTAQEA 397 DL+ LLQGL + P AR TA +A Sbjct: 273 DLLELLQGLFTFNPCARCTASQA 295
>GATA6_MOUSE (Q61169) Transcription factor GATA-6 (GATA-binding factor 6)| Length = 444 Score = 29.6 bits (65), Expect = 7.9 Identities = 21/57 (36%), Positives = 23/57 (40%), Gaps = 2/57 (3%) Frame = -3 Query: 535 HESCSQAA--SPPEPGDAACGSLCRGPDRAAAGPPGIRAFGQADRPGSPEPPLLQAA 371 H SQA+ SPP G A G GP G A A P SP PP+ A Sbjct: 75 HPGWSQASADSPPYGGGGAAGGGAAGP----GGAGSATAHASARFPYSPSPPMANGA 127
>YACH_ECOLI (P36682) Hypothetical protein yacH| Length = 617 Score = 26.6 bits (57), Expect(2) = 9.6 Identities = 14/52 (26%), Positives = 24/52 (46%) Frame = +1 Query: 319 FGSATDIIGWS*RPPFTVPPEEAVAQGFLGGQPGRRLVCQEALQQPDQVPGR 474 +GS D +S R P T ++A Q + P +R +E +Q ++ R Sbjct: 440 YGSYDDFHDFSRRQPLTQQQKDAARQRYQSASPEQRQAVRERMQTNPKIQQR 491 Score = 21.2 bits (43), Expect(2) = 9.6 Identities = 10/31 (32%), Positives = 16/31 (51%) Frame = +2 Query: 176 RQASSEVLTMATAPCPVIPREIQTELSSLLF 268 RQA++ T PVI R+ Q + ++ F Sbjct: 404 RQAAANQFQQRTHAAPVITRDTQRQAAAQRF 434 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 96,881,979 Number of Sequences: 219361 Number of extensions: 2085614 Number of successful extensions: 7447 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 6779 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7389 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5938641176 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
