Clone Name | rbasd27b06 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_550351.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1266 Score = 323 bits (163), Expect = 4e-85 Identities = 349/411 (84%) Strand = Plus / Minus Query: 205 agcccgcccccggcgccgtagagcggcaccttctcgccgtgtatcaccgccgacaccagc 264 |||||||| |||||||||||||| |||||||| | |||||| | |||||||| ||||| | Sbjct: 904 agcccgccgccggcgccgtagaggggcaccttgttgccgtggaccaccgccgtcaccaac 845 Query: 265 cggtggctcctgctcggctggtagtacttgcggacctgtccaaccccgatggcgatctcg 324 ||||||||| | ||||||||||||||| |||| ||||||||||||||||| | |||||| Sbjct: 844 cggtggctcttcctcggctggtagtacctgcgaacctgtccaaccccgatagagatctct 785 Query: 325 gaatagagcaggcggacggggcccgaggagacatggatcccgaacatggaagcagggttg 384 |||||||| ||||| | || |||| | ||||||||| || ||||| |||||||||||| Sbjct: 784 gaatagagaaggcgaataggacccgtcgtgacatggattccaaacattgaagcagggttg 725 Query: 385 tacacgatcatgttgagggagcagttgagggtgaccatcttggtcggaaccccgctgtgg 444 || || |||| || |||||||| || || |||| ||||| |||||||| |||||| Sbjct: 724 tatacagctatgtgcagagagcagttcagtgtaaccaatttggttggaaccccactgtgg 665 Query: 445 tctgtgccctctccggcgtagaagttatccatggctatgctcttgacgacgacgtcgggc 504 ||||||||||| || |||||||| | |||||| | | |||||||||||||||||||||| Sbjct: 664 tctgtgccctcaccagcgtagaaatcatccatcgtcaagctcttgacgacgacgtcgggc 605 Query: 505 tcgtaggggcgggcggcgccccagacgatgaggcagatgacggtgaagagcaggaggaag 564 ||||||||||| ||||||||||||| ||||||||||| |||||||||||| |||| |||| Sbjct: 604 tcgtaggggcgagcggcgccccagatgatgaggcagaagacggtgaagaggaggacgaag 545 Query: 565 ctgacgaagccgagcgcgaccttgcagcggccggagaggccgctgtcgccg 615 | || ||||||||| ||| || |||||||| |||||||||| |||||||| Sbjct: 544 cagaggaagccgaggacgatctggcagcggcgggagaggccggtgtcgccg 494 Score = 109 bits (55), Expect = 1e-20 Identities = 123/145 (84%), Gaps = 3/145 (2%) Strand = Plus / Minus Query: 22 ttgtagacggcgcaggccttcttgggga---tccgggtcctcgccctcttggcgtcgacg 78 ||||||||||||||||||||||||| || | || | ||| | |||||||||||||| Sbjct: 1087 ttgtagacggcgcaggccttcttggagaacttgatgggcttcgtcttcttggcgtcgacg 1028 Query: 79 gtgatgcggcacgtcacgtgcgccctgtgcgtcacccggaccagcttgccgatgacgtag 138 |||| |||||||||||||| || |||||||||||| |||||||||||||||||||| Sbjct: 1027 acgatggggcacgtcacgtgcaccttgtgcgtcaccctcaccagcttgccgatgacgtat 968 Query: 139 ccccgggagacgagctcgaagtcca 163 ||||||||| ||| |||||||||| Sbjct: 967 ccccgggaggtgaggtcgaagtcca 943
>dbj|AK106071.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-H07, full insert sequence Length = 1307 Score = 323 bits (163), Expect = 4e-85 Identities = 349/411 (84%) Strand = Plus / Minus Query: 205 agcccgcccccggcgccgtagagcggcaccttctcgccgtgtatcaccgccgacaccagc 264 |||||||| |||||||||||||| |||||||| | |||||| | |||||||| ||||| | Sbjct: 902 agcccgccgccggcgccgtagaggggcaccttgttgccgtggaccaccgccgtcaccaac 843 Query: 265 cggtggctcctgctcggctggtagtacttgcggacctgtccaaccccgatggcgatctcg 324 ||||||||| | ||||||||||||||| |||| ||||||||||||||||| | |||||| Sbjct: 842 cggtggctcttcctcggctggtagtacctgcgaacctgtccaaccccgatagagatctct 783 Query: 325 gaatagagcaggcggacggggcccgaggagacatggatcccgaacatggaagcagggttg 384 |||||||| ||||| | || |||| | ||||||||| || ||||| |||||||||||| Sbjct: 782 gaatagagaaggcgaataggacccgtcgtgacatggattccaaacattgaagcagggttg 723 Query: 385 tacacgatcatgttgagggagcagttgagggtgaccatcttggtcggaaccccgctgtgg 444 || || |||| || |||||||| || || |||| ||||| |||||||| |||||| Sbjct: 722 tatacagctatgtgcagagagcagttcagtgtaaccaatttggttggaaccccactgtgg 663 Query: 445 tctgtgccctctccggcgtagaagttatccatggctatgctcttgacgacgacgtcgggc 504 ||||||||||| || |||||||| | |||||| | | |||||||||||||||||||||| Sbjct: 662 tctgtgccctcaccagcgtagaaatcatccatcgtcaagctcttgacgacgacgtcgggc 603 Query: 505 tcgtaggggcgggcggcgccccagacgatgaggcagatgacggtgaagagcaggaggaag 564 ||||||||||| ||||||||||||| ||||||||||| |||||||||||| |||| |||| Sbjct: 602 tcgtaggggcgagcggcgccccagatgatgaggcagaagacggtgaagaggaggacgaag 543 Query: 565 ctgacgaagccgagcgcgaccttgcagcggccggagaggccgctgtcgccg 615 | || ||||||||| ||| || |||||||| |||||||||| |||||||| Sbjct: 542 cagaggaagccgaggacgatctggcagcggcgggagaggccggtgtcgccg 492 Score = 109 bits (55), Expect = 1e-20 Identities = 123/145 (84%), Gaps = 3/145 (2%) Strand = Plus / Minus Query: 22 ttgtagacggcgcaggccttcttgggga---tccgggtcctcgccctcttggcgtcgacg 78 ||||||||||||||||||||||||| || | || | ||| | |||||||||||||| Sbjct: 1085 ttgtagacggcgcaggccttcttggagaacttgatgggcttcgtcttcttggcgtcgacg 1026 Query: 79 gtgatgcggcacgtcacgtgcgccctgtgcgtcacccggaccagcttgccgatgacgtag 138 |||| |||||||||||||| || |||||||||||| |||||||||||||||||||| Sbjct: 1025 acgatggggcacgtcacgtgcaccttgtgcgtcaccctcaccagcttgccgatgacgtat 966 Query: 139 ccccgggagacgagctcgaagtcca 163 ||||||||| ||| |||||||||| Sbjct: 965 ccccgggaggtgaggtcgaagtcca 941
>dbj|AK073824.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070N04, full insert sequence Length = 1427 Score = 323 bits (163), Expect = 4e-85 Identities = 349/411 (84%) Strand = Plus / Minus Query: 205 agcccgcccccggcgccgtagagcggcaccttctcgccgtgtatcaccgccgacaccagc 264 |||||||| |||||||||||||| |||||||| | |||||| | |||||||| ||||| | Sbjct: 901 agcccgccgccggcgccgtagaggggcaccttgttgccgtggaccaccgccgtcaccaac 842 Query: 265 cggtggctcctgctcggctggtagtacttgcggacctgtccaaccccgatggcgatctcg 324 ||||||||| | ||||||||||||||| |||| ||||||||||||||||| | |||||| Sbjct: 841 cggtggctcttcctcggctggtagtacctgcgaacctgtccaaccccgatagagatctct 782 Query: 325 gaatagagcaggcggacggggcccgaggagacatggatcccgaacatggaagcagggttg 384 |||||||| ||||| | || |||| | ||||||||| || ||||| |||||||||||| Sbjct: 781 gaatagagaaggcgaataggacccgtcgtgacatggattccaaacattgaagcagggttg 722 Query: 385 tacacgatcatgttgagggagcagttgagggtgaccatcttggtcggaaccccgctgtgg 444 || || |||| || |||||||| || || |||| ||||| |||||||| |||||| Sbjct: 721 tatacagctatgtgcagagagcagttcagtgtaaccaatttggttggaaccccactgtgg 662 Query: 445 tctgtgccctctccggcgtagaagttatccatggctatgctcttgacgacgacgtcgggc 504 ||||||||||| || |||||||| | |||||| | | |||||||||||||||||||||| Sbjct: 661 tctgtgccctcaccagcgtagaaatcatccatcgtcaagctcttgacgacgacgtcgggc 602 Query: 505 tcgtaggggcgggcggcgccccagacgatgaggcagatgacggtgaagagcaggaggaag 564 ||||||||||| ||||||||||||| ||||||||||| |||||||||||| |||| |||| Sbjct: 601 tcgtaggggcgagcggcgccccagatgatgaggcagaagacggtgaagaggaggacgaag 542 Query: 565 ctgacgaagccgagcgcgaccttgcagcggccggagaggccgctgtcgccg 615 | || ||||||||| ||| || |||||||| |||||||||| |||||||| Sbjct: 541 cagaggaagccgaggacgatctggcagcggcgggagaggccggtgtcgccg 491 Score = 109 bits (55), Expect = 1e-20 Identities = 123/145 (84%), Gaps = 3/145 (2%) Strand = Plus / Minus Query: 22 ttgtagacggcgcaggccttcttgggga---tccgggtcctcgccctcttggcgtcgacg 78 ||||||||||||||||||||||||| || | || | ||| | |||||||||||||| Sbjct: 1084 ttgtagacggcgcaggccttcttggagaacttgatgggcttcgtcttcttggcgtcgacg 1025 Query: 79 gtgatgcggcacgtcacgtgcgccctgtgcgtcacccggaccagcttgccgatgacgtag 138 |||| |||||||||||||| || |||||||||||| |||||||||||||||||||| Sbjct: 1024 acgatggggcacgtcacgtgcaccttgtgcgtcaccctcaccagcttgccgatgacgtat 965 Query: 139 ccccgggagacgagctcgaagtcca 163 ||||||||| ||| |||||||||| Sbjct: 964 ccccgggaggtgaggtcgaagtcca 940
>dbj|AK060328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-A10, full insert sequence Length = 1266 Score = 323 bits (163), Expect = 4e-85 Identities = 349/411 (84%) Strand = Plus / Minus Query: 205 agcccgcccccggcgccgtagagcggcaccttctcgccgtgtatcaccgccgacaccagc 264 |||||||| |||||||||||||| |||||||| | |||||| | |||||||| ||||| | Sbjct: 904 agcccgccgccggcgccgtagaggggcaccttgttgccgtggaccaccgccgtcaccaac 845 Query: 265 cggtggctcctgctcggctggtagtacttgcggacctgtccaaccccgatggcgatctcg 324 ||||||||| | ||||||||||||||| |||| ||||||||||||||||| | |||||| Sbjct: 844 cggtggctcttcctcggctggtagtacctgcgaacctgtccaaccccgatagagatctct 785 Query: 325 gaatagagcaggcggacggggcccgaggagacatggatcccgaacatggaagcagggttg 384 |||||||| ||||| | || |||| | ||||||||| || ||||| |||||||||||| Sbjct: 784 gaatagagaaggcgaataggacccgtcgtgacatggattccaaacattgaagcagggttg 725 Query: 385 tacacgatcatgttgagggagcagttgagggtgaccatcttggtcggaaccccgctgtgg 444 || || |||| || |||||||| || || |||| ||||| |||||||| |||||| Sbjct: 724 tatacagctatgtgcagagagcagttcagtgtaaccaatttggttggaaccccactgtgg 665 Query: 445 tctgtgccctctccggcgtagaagttatccatggctatgctcttgacgacgacgtcgggc 504 ||||||||||| || |||||||| | |||||| | | |||||||||||||||||||||| Sbjct: 664 tctgtgccctcaccagcgtagaaatcatccatcgtcaagctcttgacgacgacgtcgggc 605 Query: 505 tcgtaggggcgggcggcgccccagacgatgaggcagatgacggtgaagagcaggaggaag 564 ||||||||||| ||||||||||||| ||||||||||| |||||||||||| |||| |||| Sbjct: 604 tcgtaggggcgagcggcgccccagatgatgaggcagaagacggtgaagaggaggacgaag 545 Query: 565 ctgacgaagccgagcgcgaccttgcagcggccggagaggccgctgtcgccg 615 | || ||||||||| ||| || |||||||| |||||||||| |||||||| Sbjct: 544 cagaggaagccgaggacgatctggcagcggcgggagaggccggtgtcgccg 494 Score = 109 bits (55), Expect = 1e-20 Identities = 123/145 (84%), Gaps = 3/145 (2%) Strand = Plus / Minus Query: 22 ttgtagacggcgcaggccttcttgggga---tccgggtcctcgccctcttggcgtcgacg 78 ||||||||||||||||||||||||| || | || | ||| | |||||||||||||| Sbjct: 1087 ttgtagacggcgcaggccttcttggagaacttgatgggcttcgtcttcttggcgtcgacg 1028 Query: 79 gtgatgcggcacgtcacgtgcgccctgtgcgtcacccggaccagcttgccgatgacgtag 138 |||| |||||||||||||| || |||||||||||| |||||||||||||||||||| Sbjct: 1027 acgatggggcacgtcacgtgcaccttgtgcgtcaccctcaccagcttgccgatgacgtat 968 Query: 139 ccccgggagacgagctcgaagtcca 163 ||||||||| ||| |||||||||| Sbjct: 967 ccccgggaggtgaggtcgaagtcca 943
>dbj|AK058295.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-F03, full insert sequence Length = 1463 Score = 323 bits (163), Expect = 4e-85 Identities = 349/411 (84%) Strand = Plus / Minus Query: 205 agcccgcccccggcgccgtagagcggcaccttctcgccgtgtatcaccgccgacaccagc 264 |||||||| |||||||||||||| |||||||| | |||||| | |||||||| ||||| | Sbjct: 891 agcccgccgccggcgccgtagaggggcaccttgttgccgtggaccaccgccgtcaccaac 832 Query: 265 cggtggctcctgctcggctggtagtacttgcggacctgtccaaccccgatggcgatctcg 324 ||||||||| | ||||||||||||||| |||| ||||||||||||||||| | |||||| Sbjct: 831 cggtggctcttcctcggctggtagtacctgcgaacctgtccaaccccgatagagatctct 772 Query: 325 gaatagagcaggcggacggggcccgaggagacatggatcccgaacatggaagcagggttg 384 |||||||| ||||| | || |||| | ||||||||| || ||||| |||||||||||| Sbjct: 771 gaatagagaaggcgaataggacccgtcgtgacatggattccaaacattgaagcagggttg 712 Query: 385 tacacgatcatgttgagggagcagttgagggtgaccatcttggtcggaaccccgctgtgg 444 || || |||| || |||||||| || || |||| ||||| |||||||| |||||| Sbjct: 711 tatacagctatgtgcagagagcagttcagtgtaaccaatttggttggaaccccactgtgg 652 Query: 445 tctgtgccctctccggcgtagaagttatccatggctatgctcttgacgacgacgtcgggc 504 ||||||||||| || |||||||| | |||||| | | |||||||||||||||||||||| Sbjct: 651 tctgtgccctcaccagcgtagaaatcatccatcgtcaagctcttgacgacgacgtcgggc 592 Query: 505 tcgtaggggcgggcggcgccccagacgatgaggcagatgacggtgaagagcaggaggaag 564 ||||||||||| ||||||||||||| ||||||||||| |||||||||||| |||| |||| Sbjct: 591 tcgtaggggcgagcggcgccccagatgatgaggcagaagacggtgaagaggaggacgaag 532 Query: 565 ctgacgaagccgagcgcgaccttgcagcggccggagaggccgctgtcgccg 615 | || ||||||||| ||| || |||||||| |||||||||| |||||||| Sbjct: 531 cagaggaagccgaggacgatctggcagcggcgggagaggccggtgtcgccg 481 Score = 101 bits (51), Expect = 3e-18 Identities = 122/145 (84%), Gaps = 3/145 (2%) Strand = Plus / Minus Query: 22 ttgtagacggcgcaggccttcttgggga---tccgggtcctcgccctcttggcgtcgacg 78 ||||||||||||||||||||||||| || | || | ||| | |||||||||||||| Sbjct: 1074 ttgtagacggcgcaggccttcttggagaacttgatgggcttcgtcttcttggcgtcgacg 1015 Query: 79 gtgatgcggcacgtcacgtgcgccctgtgcgtcacccggaccagcttgccgatgacgtag 138 |||| |||||||||||||| || |||||||||||| |||||| ||||||||||||| Sbjct: 1014 acgatggggcacgtcacgtgcaccttgtgcgtcaccctcaccagcctgccgatgacgtat 955 Query: 139 ccccgggagacgagctcgaagtcca 163 ||||||||| ||| |||||||||| Sbjct: 954 ccccgggaggtgaggtcgaagtcca 930
>gb|AY105213.1| Zea mays PCO065280 mRNA sequence Length = 731 Score = 224 bits (113), Expect = 3e-55 Identities = 259/307 (84%), Gaps = 3/307 (0%) Strand = Plus / Minus Query: 86 ggcacgtcacgtgcgccctgtgcgtcacccggaccagcttgccgatgacgtagccccggg 145 ||||||||||||||||||||||||||||||| || ||| ||||||| ||||||||||||| Sbjct: 333 ggcacgtcacgtgcgccctgtgcgtcacccgcacgagcctgccgatcacgtagccccggg 274 Query: 146 agacgagctcgaagtccacggtgaggggcaccgtcgcgccgtc---gttcccggacagcg 202 || ||| |||||||||| || |||||||||| | | ||| | | || |||||||| Sbjct: 273 aggtgaggtcgaagtccagcgtcaggggcaccgcccccccgcccgcgctcgtggacagcg 214 Query: 203 agagcccgcccccggcgccgtagagcggcaccttctcgccgtgtatcaccgccgacacca 262 || ||||||||||||||||| |||||||||||||||||||| |||||||||| |||| Sbjct: 213 tcaggccgcccccggcgccgtacagcggcaccttctcgccgtggatcaccgccgtcaccg 154 Query: 263 gccggtggctcctgctcggctggtagtacttgcggacctgtccaaccccgatggcgatct 322 |||||||||| | ||||||||||||||| |||||||||| || || | || | ||||| Sbjct: 153 tccggtggctcttcctcggctggtagtacctgcggacctggccgactgctattgagatct 94 Query: 323 cggaatagagcaggcggacggggcccgaggagacatggatcccgaacatggaagcagggt 382 | ||||||| ||| |||| |||||| |||| |||||||||||| ||||| | ||||||| Sbjct: 93 ctgaatagatcagacggatggggccggaggtgacatggatcccaaacattgtggcagggt 34 Query: 383 tgtacac 389 ||||||| Sbjct: 33 tgtacac 27
>gb|AY108252.1| Zea mays PCO090236 mRNA sequence Length = 1456 Score = 202 bits (102), Expect = 1e-48 Identities = 330/406 (81%) Strand = Plus / Minus Query: 210 gcccccggcgccgtagagcggcaccttctcgccgtgtatcaccgccgacaccagccggtg 269 ||||||||||||||| |||||||||||||||||||| || ||||||| ||||| |||||| Sbjct: 941 gcccccggcgccgtacagcggcaccttctcgccgtggatgaccgccgtcaccatccggtg 882 Query: 270 gctcctgctcggctggtagtacttgcggacctgtccaaccccgatggcgatctcggaata 329 |||| | ||||||||||| ||| | || ||||| || || | || | |||||| ||||| Sbjct: 881 gctcttcctcggctggtaatacctccgaacctgaccgactgctattgggatctctgaata 822 Query: 330 gagcaggcggacggggcccgaggagacatggatcccgaacatggaagcagggttgtacac 389 | |||| ||| |||||| || | |||||| || || ||||| | ||||||||||| || Sbjct: 821 catcaggtggatggggccagaagtgacatgaattccaaacattgtggcagggttgtagac 762 Query: 390 gatcatgttgagggagcagttgagggtgaccatcttggtcggaaccccgctgtggtctgt 449 |||| || |||||||| ||||||| || || ||||| ||||||||||| || Sbjct: 761 agctatgtgcagagagcagtttgttgtgaccaattttgttggaacgccgctgtggtccgt 702 Query: 450 gccctctccggcgtagaagttatccatggctatgctcttgacgacgacgtcgggctcgta 509 ||| || || |||||||||| ||||| | | ||||||||||| ||| ||||||||||| Sbjct: 701 gccttcacccgcgtagaagtcgtccatcaccaagctcttgacgatgacctcgggctcgta 642 Query: 510 ggggcgggcggcgccccagacgatgaggcagatgacggtgaagagcaggaggaagctgac 569 || |||||||||||||||| ||||||||||| |||||||||||| |||| |||| ||| Sbjct: 641 cggccgggcggcgccccagatgatgaggcagaagacggtgaagaggaggacgaaggtgag 582 Query: 570 gaagccgagcgcgaccttgcagcggccggagaggccgctgtcgccg 615 ||||||||| || || |||||||| |||||||||||| |||||| Sbjct: 581 gaagccgagtatgatctggcagcggcgggagaggccgctatcgccg 536 Score = 77.8 bits (39), Expect = 4e-11 Identities = 69/79 (87%) Strand = Plus / Minus Query: 65 tcttggcgtcgacggtgatgcggcacgtcacgtgcgccctgtgcgtcacccggaccagct 124 |||||||||| ||| || | |||||||||||||| || ||||||||||||| || |||| Sbjct: 1086 tcttggcgtccacgacgacggggcacgtcacgtgcaccttgtgcgtcacccgcacgagct 1027 Query: 125 tgccgatgacgtagccccg 143 ||||||| ||||||||||| Sbjct: 1026 tgccgatcacgtagccccg 1008
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 155 bits (78), Expect = 2e-34 Identities = 117/130 (90%) Strand = Plus / Minus Query: 486 cttgacgacgacgtcgggctcgtaggggcgggcggcgccccagacgatgaggcagatgac 545 |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||| Sbjct: 3195416 cttgacgacgacgtcgggctcgtaggggcgagcggcgccccagatgatgaggcagaagac 3195357 Query: 546 ggtgaagagcaggaggaagctgacgaagccgagcgcgaccttgcagcggccggagaggcc 605 ||||||||| |||| ||||| || ||||||||| ||| || |||||||| ||||||||| Sbjct: 3195356 ggtgaagaggaggacgaagcagaggaagccgaggacgatctggcagcggcgggagaggcc 3195297 Query: 606 gctgtcgccg 615 | |||||||| Sbjct: 3195296 ggtgtcgccg 3195287 Score = 109 bits (55), Expect = 1e-20 Identities = 123/145 (84%), Gaps = 3/145 (2%) Strand = Plus / Minus Query: 22 ttgtagacggcgcaggccttcttgggga---tccgggtcctcgccctcttggcgtcgacg 78 ||||||||||||||||||||||||| || | || | ||| | |||||||||||||| Sbjct: 3197549 ttgtagacggcgcaggccttcttggagaacttgatgggcttcgtcttcttggcgtcgacg 3197490 Query: 79 gtgatgcggcacgtcacgtgcgccctgtgcgtcacccggaccagcttgccgatgacgtag 138 |||| |||||||||||||| || |||||||||||| |||||||||||||||||||| Sbjct: 3197489 acgatggggcacgtcacgtgcaccttgtgcgtcaccctcaccagcttgccgatgacgtat 3197430 Query: 139 ccccgggagacgagctcgaagtcca 163 ||||||||| ||| |||||||||| Sbjct: 3197429 ccccgggaggtgaggtcgaagtcca 3197405 Score = 99.6 bits (50), Expect = 1e-17 Identities = 86/98 (87%) Strand = Plus / Minus Query: 205 agcccgcccccggcgccgtagagcggcaccttctcgccgtgtatcaccgccgacaccagc 264 |||||||| |||||||||||||| |||||||| | |||||| | |||||||| ||||| | Sbjct: 3197366 agcccgccgccggcgccgtagaggggcaccttgttgccgtggaccaccgccgtcaccaac 3197307 Query: 265 cggtggctcctgctcggctggtagtacttgcggacctg 302 ||||||||| | ||||||||||||||| |||| ||||| Sbjct: 3197306 cggtggctcttcctcggctggtagtacctgcgaacctg 3197269 Score = 93.7 bits (47), Expect = 7e-16 Identities = 146/179 (81%) Strand = Plus / Minus Query: 298 acctgtccaaccccgatggcgatctcggaatagagcaggcggacggggcccgaggagaca 357 ||||||||||||||||| | |||||| |||||||| ||||| | || |||| | |||| Sbjct: 3196469 acctgtccaaccccgatagagatctctgaatagagaaggcgaataggacccgtcgtgaca 3196410 Query: 358 tggatcccgaacatggaagcagggttgtacacgatcatgttgagggagcagttgagggtg 417 ||||| || ||||| |||||||||||||| || |||| || |||||||| || || Sbjct: 3196409 tggattccaaacattgaagcagggttgtatacagctatgtgcagagagcagttcagtgta 3196350 Query: 418 accatcttggtcggaaccccgctgtggtctgtgccctctccggcgtagaagttatccat 476 |||| ||||| |||||||| ||||||||||||||||| || |||||||| | |||||| Sbjct: 3196349 accaatttggttggaaccccactgtggtctgtgccctcaccagcgtagaaatcatccat 3196291
>dbj|AB026295.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone:P0681F10 Length = 170371 Score = 155 bits (78), Expect = 2e-34 Identities = 117/130 (90%) Strand = Plus / Minus Query: 486 cttgacgacgacgtcgggctcgtaggggcgggcggcgccccagacgatgaggcagatgac 545 |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||| Sbjct: 149601 cttgacgacgacgtcgggctcgtaggggcgagcggcgccccagatgatgaggcagaagac 149542 Query: 546 ggtgaagagcaggaggaagctgacgaagccgagcgcgaccttgcagcggccggagaggcc 605 ||||||||| |||| ||||| || ||||||||| ||| || |||||||| ||||||||| Sbjct: 149541 ggtgaagaggaggacgaagcagaggaagccgaggacgatctggcagcggcgggagaggcc 149482 Query: 606 gctgtcgccg 615 | |||||||| Sbjct: 149481 ggtgtcgccg 149472 Score = 109 bits (55), Expect = 1e-20 Identities = 123/145 (84%), Gaps = 3/145 (2%) Strand = Plus / Minus Query: 22 ttgtagacggcgcaggccttcttgggga---tccgggtcctcgccctcttggcgtcgacg 78 ||||||||||||||||||||||||| || | || | ||| | |||||||||||||| Sbjct: 151734 ttgtagacggcgcaggccttcttggagaacttgatgggcttcgtcttcttggcgtcgacg 151675 Query: 79 gtgatgcggcacgtcacgtgcgccctgtgcgtcacccggaccagcttgccgatgacgtag 138 |||| |||||||||||||| || |||||||||||| |||||||||||||||||||| Sbjct: 151674 acgatggggcacgtcacgtgcaccttgtgcgtcaccctcaccagcttgccgatgacgtat 151615 Query: 139 ccccgggagacgagctcgaagtcca 163 ||||||||| ||| |||||||||| Sbjct: 151614 ccccgggaggtgaggtcgaagtcca 151590 Score = 99.6 bits (50), Expect = 1e-17 Identities = 86/98 (87%) Strand = Plus / Minus Query: 205 agcccgcccccggcgccgtagagcggcaccttctcgccgtgtatcaccgccgacaccagc 264 |||||||| |||||||||||||| |||||||| | |||||| | |||||||| ||||| | Sbjct: 151551 agcccgccgccggcgccgtagaggggcaccttgttgccgtggaccaccgccgtcaccaac 151492 Query: 265 cggtggctcctgctcggctggtagtacttgcggacctg 302 ||||||||| | ||||||||||||||| |||| ||||| Sbjct: 151491 cggtggctcttcctcggctggtagtacctgcgaacctg 151454 Score = 93.7 bits (47), Expect = 7e-16 Identities = 146/179 (81%) Strand = Plus / Minus Query: 298 acctgtccaaccccgatggcgatctcggaatagagcaggcggacggggcccgaggagaca 357 ||||||||||||||||| | |||||| |||||||| ||||| | || |||| | |||| Sbjct: 150654 acctgtccaaccccgatagagatctctgaatagagaaggcgaataggacccgtcgtgaca 150595 Query: 358 tggatcccgaacatggaagcagggttgtacacgatcatgttgagggagcagttgagggtg 417 ||||| || ||||| |||||||||||||| || |||| || |||||||| || || Sbjct: 150594 tggattccaaacattgaagcagggttgtatacagctatgtgcagagagcagttcagtgta 150535 Query: 418 accatcttggtcggaaccccgctgtggtctgtgccctctccggcgtagaagttatccat 476 |||| ||||| |||||||| ||||||||||||||||| || |||||||| | |||||| Sbjct: 150534 accaatttggttggaaccccactgtggtctgtgccctcaccagcgtagaaatcatccat 150476
>ref|NM_188588.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 966 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Minus Query: 523 ccccagacgatgaggcagatgacggtgaag 552 ||||||||||||||||||| || ||||||| Sbjct: 464 ccccagacgatgaggcagacgagggtgaag 435
>ref|XM_466774.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1686 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Minus Query: 530 cgatgaggcagatgacggtgaagagcagga 559 |||||||| |||||||||||||||||||| Sbjct: 927 cgatgaggatgatgacggtgaagagcagga 898
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 216 ggcgccgtagagcggcaccttctcgc 241 |||||||||||||||||||| ||||| Sbjct: 2498397 ggcgccgtagagcggcacctcctcgc 2498422
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 214 ccggcgccgtagagcggcacct 235 |||||||||||||||||||||| Sbjct: 27124779 ccggcgccgtagagcggcacct 27124800 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Minus Query: 530 cgatgaggcagatgacggtgaagagcagga 559 |||||||| |||||||||||||||||||| Sbjct: 24615493 cgatgaggatgatgacggtgaagagcagga 24615464
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Plus Query: 523 ccccagacgatgaggcagatgacggtgaag 552 ||||||||||||||||||| || ||||||| Sbjct: 7095822 ccccagacgatgaggcagacgagggtgaag 7095851 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 521 cgccccagacgatgaggcagatgacggtgaagagcaggaggaagc 565 ||||||||| ||||||||||| || |||||| || |||| ||||| Sbjct: 42663901 cgccccagatgatgaggcagaagatggtgaacaggaggacgaagc 42663945
>dbj|AP003434.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0452F10 Length = 145120 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Plus Query: 523 ccccagacgatgaggcagatgacggtgaag 552 ||||||||||||||||||| || ||||||| Sbjct: 83402 ccccagacgatgaggcagacgagggtgaag 83431
>dbj|AP004858.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1725_H08 Length = 155431 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 214 ccggcgccgtagagcggcacct 235 |||||||||||||||||||||| Sbjct: 21228 ccggcgccgtagagcggcacct 21249
>dbj|AP004139.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1486_E07 Length = 110494 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 214 ccggcgccgtagagcggcacct 235 |||||||||||||||||||||| Sbjct: 96428 ccggcgccgtagagcggcacct 96449
>dbj|AP003980.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1014_H03 Length = 132696 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Minus Query: 530 cgatgaggcagatgacggtgaagagcagga 559 |||||||| |||||||||||||||||||| Sbjct: 129594 cgatgaggatgatgacggtgaagagcagga 129565
>dbj|AP004083.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1212_C01 Length = 124548 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Minus Query: 530 cgatgaggcagatgacggtgaagagcagga 559 |||||||| |||||||||||||||||||| Sbjct: 60042 cgatgaggatgatgacggtgaagagcagga 60013
>dbj|AK119627.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-E07, full insert sequence Length = 1159 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Minus Query: 523 ccccagacgatgaggcagatgacggtgaag 552 ||||||||||||||||||| || ||||||| Sbjct: 568 ccccagacgatgaggcagacgagggtgaag 539
>dbj|AK073500.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044J15, full insert sequence Length = 1255 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 214 ccggcgccgtagagcggcacct 235 |||||||||||||||||||||| Sbjct: 845 ccggcgccgtagagcggcacct 824
>dbj|AK070657.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023056H15, full insert sequence Length = 1686 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Minus Query: 530 cgatgaggcagatgacggtgaagagcagga 559 |||||||| |||||||||||||||||||| Sbjct: 927 cgatgaggatgatgacggtgaagagcagga 898
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 247 atcaccgccgacaccagccgg 267 ||||||||||||||||||||| Sbjct: 2246134 atcaccgccgacaccagccgg 2246154
>gb|AC136746.15| Mus musculus chromosome 5, clone RP23-151C5, complete sequence Length = 195530 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 195 ggacagcgagagcccgccccc 215 ||||||||||||||||||||| Sbjct: 193786 ggacagcgagagcccgccccc 193806
>dbj|AP004365.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0458E05 Length = 193577 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 521 cgccccagacgatgaggcagatgacggtgaagagcaggaggaagc 565 ||||||||| ||||||||||| || |||||| || |||| ||||| Sbjct: 184784 cgccccagatgatgaggcagaagatggtgaacaggaggacgaagc 184828
>gb|AC153488.1| Tribolium castaneum BAC T.cast_C24H10 (Clemson University Genomics Institute Tribolium castaneum BAC Library (Red Flour Beetle)) complete sequence Length = 40580 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 202 gagagcccgcccccggcgccgtagagcg 229 ||||||||||| ||||||||| |||||| Sbjct: 25567 gagagcccgccgccggcgccgcagagcg 25594
>gb|AC152927.1| Tribolium castaneum BAC T.cast_C19N19 (Clemson University Genomics Institute Tribolium castaneum BAC Library (Red Flour Beetle)) complete sequence Length = 137018 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 202 gagagcccgcccccggcgccgtagagcg 229 ||||||||||| ||||||||| |||||| Sbjct: 28239 gagagcccgccgccggcgccgcagagcg 28212
>ref|XM_470603.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1356 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 cgtcgacggtgatgcggcac 90 |||||||||||||||||||| Sbjct: 1087 cgtcgacggtgatgcggcac 1068
>ref|XM_473275.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2313 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 gcggacggggcccgaggaga 355 |||||||||||||||||||| Sbjct: 321 gcggacggggcccgaggaga 302
>ref|XM_473121.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1353 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 gatgacggtgaagagcagga 559 |||||||||||||||||||| Sbjct: 807 gatgacggtgaagagcagga 788
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 317 cgatctcggaatagagcaggcgga 340 |||||||||||||||||| ||||| Sbjct: 1160120 cgatctcggaatagagcacgcgga 1160097
>ref|XM_588913.2| PREDICTED: Bos taurus similar to Glycerol-3-phosphate transporter (G-3-P transporter) (G-3-P permease) (Solute carrier family 37 member 1) (LOC511558), mRNA Length = 2495 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 546 ggtgaagagcaggaggaagc 565 |||||||||||||||||||| Sbjct: 2127 ggtgaagagcaggaggaagc 2108
>gb|BC053205.1| Danio rerio platelet-activating factor acetylhydrolase, isoform Ib, alpha subunit a, mRNA (cDNA clone MGC:64021 IMAGE:6793127), complete cds Length = 1786 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 549 gaagagcaggaggaagctga 568 |||||||||||||||||||| Sbjct: 1637 gaagagcaggaggaagctga 1618
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 cgtcgacggtgatgcggcac 90 |||||||||||||||||||| Sbjct: 6795253 cgtcgacggtgatgcggcac 6795272
>ref|XM_543804.2| PREDICTED: Canis familiaris similar to germ cell associated 1 isoform 2 (LOC486677), mRNA Length = 1105 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 553 agcaggaggaagctgacgaa 572 |||||||||||||||||||| Sbjct: 564 agcaggaggaagctgacgaa 545
>ref|XM_760833.1| Theileria parva strain Muguga chromosome 1 hypothetical protein (TP01_0399) partial mRNA Length = 1044 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 548 tgaagagcaggaggaagctgacga 571 ||||||| |||||||||||||||| Sbjct: 901 tgaagaggaggaggaagctgacga 924
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 tcttggcgtcgacggtgatg 84 |||||||||||||||||||| Sbjct: 833386 tcttggcgtcgacggtgatg 833367
>emb|AL662984.3|OSJN00183 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0081C01, complete sequence Length = 140454 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 gcggacggggcccgaggaga 355 |||||||||||||||||||| Sbjct: 56885 gcggacggggcccgaggaga 56904
>emb|AL662969.3|OSJN00169 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043L24, complete sequence Length = 164577 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 gatgacggtgaagagcagga 559 |||||||||||||||||||| Sbjct: 117916 gatgacggtgaagagcagga 117897
>emb|BX324162.8| Zebrafish DNA sequence from clone DKEY-95O3 in linkage group 15, complete sequence Length = 155540 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 549 gaagagcaggaggaagctga 568 |||||||||||||||||||| Sbjct: 76927 gaagagcaggaggaagctga 76946
>gb|AC099732.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1203D03, complete sequence Length = 82352 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 cgtcgacggtgatgcggcac 90 |||||||||||||||||||| Sbjct: 29492 cgtcgacggtgatgcggcac 29473
>gb|AF380347.1|AF380347 Mus musculus heme-regulated eIF2alpha kinase gene, promoter and exon 1 Length = 2152 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 ggacagcgagagcccgcccc 214 |||||||||||||||||||| Sbjct: 1992 ggacagcgagagcccgcccc 2011
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 gcggacggggcccgaggaga 355 |||||||||||||||||||| Sbjct: 26519998 gcggacggggcccgaggaga 26520017 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 gatgacggtgaagagcagga 559 |||||||||||||||||||| Sbjct: 25391358 gatgacggtgaagagcagga 25391339
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 cgtcgacggtgatgcggcac 90 |||||||||||||||||||| Sbjct: 6794466 cgtcgacggtgatgcggcac 6794485
>ref|NM_201345.1| Danio rerio platelet-activating factor acetylhydrolase, isoform Ib, alpha subunit a (pafah1b1a), mRNA Length = 1786 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 549 gaagagcaggaggaagctga 568 |||||||||||||||||||| Sbjct: 1637 gaagagcaggaggaagctga 1618
>dbj|AK120762.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007G09, full insert sequence Length = 1627 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 gatgacggtgaagagcagga 559 |||||||||||||||||||| Sbjct: 841 gatgacggtgaagagcagga 822
>dbj|AK120331.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013058N01, full insert sequence Length = 2527 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 gcggacggggcccgaggaga 355 |||||||||||||||||||| Sbjct: 355 gcggacggggcccgaggaga 336
>emb|AL442109.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: B1011H02, complete sequence Length = 40167 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 gcggacggggcccgaggaga 355 |||||||||||||||||||| Sbjct: 18817 gcggacggggcccgaggaga 18836
>emb|AJ242523.1|CRE242523 Chlamydomonas reinhardtii partial dhc10 gene for 1 beta dynein heavy chain, exons 1-14, and joined CDS Length = 6438 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 caccgccgacaccagccggt 268 |||||||||||||||||||| Sbjct: 6228 caccgccgacaccagccggt 6209
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 ggggcaccgtcgcgccgtcg 189 |||||||||||||||||||| Sbjct: 1662536 ggggcaccgtcgcgccgtcg 1662517
>emb|BX284666.7| Zebrafish DNA sequence from clone CH211-190K17 in linkage group 22, complete sequence Length = 139272 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 419 ccatcttggtcggaaccccg 438 |||||||||||||||||||| Sbjct: 108163 ccatcttggtcggaaccccg 108182
>emb|AL662976.3|OSJN00177 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0074L08, complete sequence Length = 171551 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 gcggacggggcccgaggaga 355 |||||||||||||||||||| Sbjct: 160638 gcggacggggcccgaggaga 160657 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,105,000 Number of Sequences: 3902068 Number of extensions: 3105000 Number of successful extensions: 65732 Number of sequences better than 10.0: 52 Number of HSP's better than 10.0 without gapping: 54 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 64876 Number of HSP's gapped (non-prelim): 848 length of query: 618 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 595 effective length of database: 17,143,297,704 effective search space: 10200262133880 effective search space used: 10200262133880 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)