>IF2_XANAC (Q8PJ55) Translation initiation factor IF-2|
          Length = 904

 Score = 34.3 bits (77), Expect = 0.39
 Identities = 20/42 (47%), Positives = 27/42 (64%)
 Frame = -3

Query: 712 ADSPKVQPAVLAPASSLPSDPVDAHKSARPNASDLPIARKAS 587
           AD+PK  P+  APA+ LPS P  A ++ARP A   P +R A+
Sbjct: 190 ADAPK--PSAAAPAARLPSSPSSAPRAARP-AGASPASRPAA 228

>TTC7A_HUMAN (Q9ULT0) Tetratricopeptide repeat protein 7A (TPR repeat protein 7)|
          Length = 858

 Score = 32.3 bits (72), Expect = 1.5
 Identities = 24/81 (29%), Positives = 37/81 (45%)
 Frame = -1

Query: 327 CSSVLFRLLWFYVIRLHSSDVKRSK*QMMMTGARSLREVLAC*HMVILSWPC*GTKVSAK 148
           C  + + L +F    L S+ VK  K   ++ G R LREVL      + +      KV A 
Sbjct: 229 CHPLDYELTYFLEAALQSAYVKNLKKGNIVKGMRELREVLR----TVETKATQNFKVMAA 284

Query: 147 KHICILHVTLIIRYCHWVSLS 85
           KH+  + +  +   C+W  LS
Sbjct: 285 KHLAGVLLHSLSEECYWSPLS 305

>IWS1_CAEBR (Q61MR2) IWS1-like protein|
          Length = 507

 Score = 32.3 bits (72), Expect = 1.5
 Identities = 19/60 (31%), Positives = 29/60 (48%)
 Frame = -3

Query: 580 RFLEKRKDRLHAKAPYQASPSDATPVKKEFENQPWLGLGPNAALKPNQ*GGMNRSLMPLP 401
           R  EKRK +LH++   +    D  P +    +   LG   +  LKP   G +NR+ +P P
Sbjct: 390 RMPEKRKKKLHSRE--EEPDEDEAPKRPRIRDAEGLGPTKSLDLKPGDKGYINRARVPKP 447

>MUTS_BRAJA (Q89VX1) DNA mismatch repair protein mutS|
          Length = 912

 Score = 31.2 bits (69), Expect = 3.3
 Identities = 26/81 (32%), Positives = 36/81 (44%)
 Frame = -3

Query: 688 AVLAPASSLPSDPVDAHKSARPNASDLPIARKASLHRFLEKRKDRLHAKAPYQASPSDAT 509
           A+L  A+SL    VD +       S L  A +A  H  +E+   R     P+ A+  D +
Sbjct: 589 ALLDVATSLAKLAVDENYVRPEVDSSLGFAIEAGRHPVVEQALKR--NGEPFIANACDLS 646

Query: 508 PVKKEFENQPWLGLGPNAALK 446
           P   +   Q WL  GPN A K
Sbjct: 647 PAPAQKSGQLWLLTGPNMAGK 667

>SYI_THIDA (Q3SHS3) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA|
           ligase) (IleRS)
          Length = 929

 Score = 30.8 bits (68), Expect = 4.3
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +3

Query: 462 GPSPSHGWFSNSFLTGVASEGEAWYGA 542
           G     GWF +S LTG A++G A Y A
Sbjct: 569 GSDQHRGWFQSSLLTGCATDGRAPYDA 595

>RAI1_HUMAN (Q7Z5J4) Retinoic acid-induced protein 1|
          Length = 1906

 Score = 30.8 bits (68), Expect = 4.3
 Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = -3

Query: 679  APASSLPSDPVDAHKSARPNASDLPIARKASLHRFLEKRKDRLHAKAP-YQASPSDATPV 503
            AP  S  SD   A K  +P   + PIA+K  + R    R  R+H   P  + SP  A  +
Sbjct: 961  APGDSTTSDASLAQKPNKPAVPEAPIAKKEPVPRGKSLRSRRVHRGLPEAEDSPCRAPVL 1020

Query: 502  KKE 494
             K+
Sbjct: 1021 PKD 1023

>SCN5A_RAT (P15389) Sodium channel protein type 5 alpha subunit (Sodium channel|
            protein type V alpha subunit) (Voltage-gated sodium
            channel alpha subunit Nav1.5) (Sodium channel protein,
            cardiac muscle alpha-subunit)
          Length = 2019

 Score = 30.4 bits (67), Expect = 5.6
 Identities = 23/64 (35%), Positives = 28/64 (43%)
 Frame = -3

Query: 694  QPAVLAPASSLPSDPVDAHKSARPNASDLPIARKASLHRFLEKRKDRLHAKAPYQASPSD 515
            +PA LA  S LPS          P    +P ARK +  RF E        K P Q +P D
Sbjct: 994  KPAALATHSQLPSCITAPRSPPPPEVEKVPPARKET--RFEED-------KRPGQGTPGD 1044

Query: 514  ATPV 503
            + PV
Sbjct: 1045 SEPV 1048

>KNIR_DROVI (Q24753) Zygotic gap protein knirps|
          Length = 481

 Score = 30.0 bits (66), Expect = 7.3
 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
 Frame = +1

Query: 532 GMVPLHAD-DPFSSQGIGEVTPF*QLADQKHSDEQTYEHQ 648
           G  P HA   P SS G G++    Q   Q+H  +Q  +HQ
Sbjct: 103 GKAPGHATGSPMSSPGFGDLAAHLQQQQQQHQQQQQQQHQ 142

>IMA1A_ORYSA (Q71VM4) Importin alpha-1a subunit|
          Length = 526

 Score = 29.6 bits (65), Expect = 9.6
 Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
 Frame = -3

Query: 649 VDAHKSARPNASDLPIARKASLHR-FLEKRKDRLHAKAPYQASPSDATPVKKEFENQP 479
           VDA +  R    ++   RK+      L+KR++ L A+AP  AS   AT V K+ E+ P
Sbjct: 20  VDAEEGRRRREDNMVEIRKSRREESLLKKRREGLQAQAPVPASA--ATGVDKKLESLP 75

>IF2_XANC5 (Q3BRP5) Translation initiation factor IF-2|
          Length = 904

 Score = 29.6 bits (65), Expect = 9.6
 Identities = 18/42 (42%), Positives = 25/42 (59%)
 Frame = -3

Query: 712 ADSPKVQPAVLAPASSLPSDPVDAHKSARPNASDLPIARKAS 587
           AD+P   P+  APA+  PS P  A ++ARP A   P +R A+
Sbjct: 190 ADAPT--PSAAAPAARSPSSPSSAPRAARP-AGASPASRPAA 228


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 101,478,014
Number of Sequences: 219361
Number of extensions: 2105023
Number of successful extensions: 5232
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5231
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7252940416
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)