ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd26m01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SYI_METAC (Q8TN62) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isole... 30 7.8
2M3K6_HUMAN (O95382) Mitogen-activated protein kinase kinase kina... 30 7.8

>SYI_METAC (Q8TN62) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA|
           ligase) (IleRS)
          Length = 1058

 Score = 29.6 bits (65), Expect = 7.8
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = +2

Query: 80  SKHQMVYKTIRSMITGWLVHKR*RVIMSMCINKLSTFFLMEI 205
           S+ Q V K +   ++G+L+HK  R I+   +  LS +++  I
Sbjct: 689 SRAQSVIKAVNEAMSGYLLHKAVREILEFALEDLSRWYIQLI 730



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>M3K6_HUMAN (O95382) Mitogen-activated protein kinase kinase kinase 6 (EC|
           2.7.11.25)
          Length = 1011

 Score = 29.6 bits (65), Expect = 7.8
 Identities = 17/38 (44%), Positives = 21/38 (55%)
 Frame = +3

Query: 261 SQFLTFPDLMDP*FQ*LSQYPLSPPA*CLTYGGFRYLQ 374
           +Q  TFP    P     SQ+P SPP  CL+YGG   L+
Sbjct: 663 TQSQTFPCPQAP-----SQHPPSPPKRCLSYGGTSQLR 695


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,182,881
Number of Sequences: 219361
Number of extensions: 1713169
Number of successful extensions: 4161
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4074
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4161
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5881538857
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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