Clone Information

BLAST Search Result

Clone Name	rbasd27a24
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	Y9953_RHOBA (Q7UKT5) UPF0061 protein RB9953	97	6e-20
2	Y5023_PSEAE (Q9HUE6) UPF0061 protein PA5023	93	9e-19
3	Y909_VIBPA (Q87R88) UPF0061 protein VP0909	92	1e-18
4	Y5028_PSESM (Q87VB1) UPF0061 protein PSPTO5028	91	4e-18
5	Y1931_VIBCH (Q9KQR7) UPF0061 protein VC1931	89	1e-17
6	Y1089_VIBVY (Q7MMI2) UPF0061 protein VV1089	87	5e-17
7	Y039_VIBVU (Q8DG12) UPF0061 protein VV1_0039	87	5e-17
8	Y5068_PSEPK (Q88CW2) UPF0061 protein PP5068	86	1e-16
9	Y2392_XANAC (Q8PJY5) UPF0061 protein XAC2392	86	1e-16
10	Y2284_XANCP (Q8P8F8) UPF0061 protein XCC2284	85	2e-16
11	Y1992_XYLFT (Q87A39) UPF0061 protein PD1992	76	1e-13
12	Y2619_XYLFA (Q9PA99) UPF0061 protein Xf2619	75	2e-13
13	SELO_MOUSE (Q9DBC0) Selenoprotein O	75	2e-13
14	Y1748_RALSO (Q8XYL0) UPF0061 protein RSc1748	74	4e-13
15	Y2107_BORBR (Q7WKJ9) UPF0061 protein BB2107	73	9e-13
16	Y1919_BORPA (Q7W954) UPF0061 protein BPP1919	73	9e-13
17	Y1090_BORPE (Q7VZ47) UPF0061 protein BP1090	72	2e-12
18	YDIU_SALTY (Q8ZPS5) UPF0061 protein ydiU	71	3e-12
19	YDIU_SALTI (Q8Z6I8) UPF0061 protein ydiU	69	1e-11
20	SELO_HUMAN (Q9BVL4) Selenoprotein O	68	3e-11
21	Y330_SHEON (Q8EJX6) UPF0061 protein SO0330	65	1e-10
22	YDIU_SHIFL (Q83L33) UPF0061 protein ydiU	65	2e-10
23	YDIU_ECOLI (P77649) UPF0061 protein ydiU	65	2e-10
24	YDIU_ECO57 (Q8X5W3) UPF0061 protein ydiU	65	2e-10
25	YDIU_ECOL6 (Q8FH30) UPF0061 protein ydiU	61	4e-09
26	Y4142_BRAJA (Q89MQ0) UPF0061 protein bll4142	55	2e-07
27	Y982_RHIME (Q92RB2) UPF0061 protein R00982	53	1e-06
28	YU61_VIBMA (Q9RA11) UPF0061 protein ORF18	52	2e-06
29	Y1733_CHRVO (Q7NX94) UPF0061 protein CV_1733	47	4e-05
30	YE35_SCHPO (O13890) UPF0061 protein C20G4.05c	47	4e-05
31	Y035_CLOPE (Q06373) UPF0061 protein CPE0035 (ORF 2)	47	5e-05
32	Y945_AGRT5 (Q8UGU0) UPF0061 protein Atu0945/AGR_C_1725	47	5e-05
33	Y3939_BACHD (Q9K5Z6) UPF0061 protein BH3939	46	1e-04
34	Y1893_COREF (Q8FP92) UPF0061 protein CE1893	42	0.001
35	Y3567_BACAN (Q81YI0) UPF0061 protein BA3567/GBAA3567/BAS3307	41	0.004
36	Y3499_BACCR (Q813A5) UPF0061 protein BC_3499	40	0.009
37	Y1999_CORGL (Q8NP26) UPF0061 protein Cgl1999/cg2190	38	0.033
38	BLM10_YEAST (P43583) Proteasome activator BLM10 (Bleomycin resis...	33	0.82
39	YCF49_CYACA (Q9TM18) Hypothetical 11.6 kDa protein ycf49	31	3.1
40	LIN12_CAEEL (P14585) Protein lin-12 precursor (Abnormal cell lin...	31	3.1
41	FD2_DROME (Q02360) Fork head domain protein FD2	30	6.9
42	GPR39_HUMAN (O43194) Probable G-protein coupled receptor 39	30	9.0

>Y9953_RHOBA (Q7UKT5) UPF0061 protein RB9953|
          Length = 540

 Score = 96.7 bits (239), Expect = 6e-20
 Identities = 48/104 (46%), Positives = 67/104 (64%), Gaps = 4/104 (3%)
 Frame = -2

Query: 611 DIGKERKEAWISWVQTYIEELVASG---VSDEERKAAMNRVNPKYVLRNYLCQTAIDAAD 441
           ++ +E ++A + W+++Y   ++A       D +R+  MN VNPKYVLRNYL Q AIDA D
Sbjct: 433 EVTEEYQQALMDWMRSYQSRVLADDGFPAEDSQRRQRMNAVNPKYVLRNYLAQLAIDACD 492

Query: 440 LGDYEEVRRLLKVMEHPYDEQPGMEKYARLPPAWA-YRPGVCML 312
            GD   V  LL+V+  PYD+QPG E++A   P WA +RPG  ML
Sbjct: 493 KGDDSLVSELLEVLRRPYDDQPGKERFAEKRPEWARHRPGCSML 536

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>Y5023_PSEAE (Q9HUE6) UPF0061 protein PA5023|
          Length = 486

 Score = 92.8 bits (229), Expect = 9e-19
 Identities = 42/85 (49%), Positives = 56/85 (65%)
 Frame = -2

Query: 593 KEAWISWVQTYIEELVASGVSDEERKAAMNRVNPKYVLRNYLCQTAIDAADLGDYEEVRR 414
           +EA+  W + Y   +   G   E R+  M+ VNP YVLRNYL Q AI+AA+ GDY EVR 
Sbjct: 392 REAFDRWAEAYRRRVEEEGGDQESRRRRMHAVNPLYVLRNYLAQQAIEAAEQGDYTEVRL 451

Query: 413 LLKVMEHPYDEQPGMEKYARLPPAW 339
           L +V+  P++EQPGME++ R PP W
Sbjct: 452 LHQVLSRPFEEQPGMERFTRRPPDW 476

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>Y909_VIBPA (Q87R88) UPF0061 protein VP0909|
          Length = 489

 Score = 92.0 bits (227), Expect = 1e-18
 Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 3/95 (3%)
 Frame = -2

Query: 614 LDIGKERKEAWISWVQTYIE---ELVASGVSDEERKAAMNRVNPKYVLRNYLCQTAIDAA 444
           L I +E  +AW+       E   + +   +S E+R   M + NPKY+LRNYL Q AID A
Sbjct: 385 LFIDREAAQAWLDLYLARCELEVDEIGEPISAEQRSEQMRQTNPKYILRNYLAQLAIDKA 444

Query: 443 DLGDYEEVRRLLKVMEHPYDEQPGMEKYARLPPAW 339
           + GD+ EV RL +++ HPYD QP  E YA+LPP W
Sbjct: 445 EEGDFSEVHRLAEILRHPYDSQPEFEAYAKLPPEW 479

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>Y5028_PSESM (Q87VB1) UPF0061 protein PSPTO5028|
          Length = 487

 Score = 90.5 bits (223), Expect = 4e-18
 Identities = 49/108 (45%), Positives = 65/108 (60%), Gaps = 1/108 (0%)
 Frame = -2

Query: 659 DIPETELLVPIKAALLDIGKERKEAWISWVQTYIEELVASGVSDEE-RKAAMNRVNPKYV 483
           D P  + L  ++   +DI     + +  W Q Y   + A     E+ RK  M+ VNP Y+
Sbjct: 375 DQPAAQALRALRDDFVDI-----KVFDDWAQAYQARIAAEENGTEQARKERMHAVNPLYI 429

Query: 482 LRNYLCQTAIDAADLGDYEEVRRLLKVMEHPYDEQPGMEKYARLPPAW 339
           LRNYL Q AI+AA+ GDYEEVRRL +V+  P+ EQPGME YA+ PP W
Sbjct: 430 LRNYLAQNAIEAAEKGDYEEVRRLHQVLCTPFTEQPGMEGYAQRPPDW 477

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>Y1931_VIBCH (Q9KQR7) UPF0061 protein VC1931|
          Length = 489

 Score = 89.4 bits (220), Expect = 1e-17
 Identities = 48/100 (48%), Positives = 66/100 (66%), Gaps = 6/100 (6%)
 Frame = -2

Query: 620 ALLDIGKERKEAWISWVQTYIE----ELVASG--VSDEERKAAMNRVNPKYVLRNYLCQT 459
           A++D+  +R EA  +W+  Y+E    EL   G  +S  ER  AM +VNPKY+LRNYL Q 
Sbjct: 381 AVIDLVLDR-EAAKTWLTRYLERAARELGQEGRPISTRERCQAMRQVNPKYILRNYLAQQ 439

Query: 458 AIDAADLGDYEEVRRLLKVMEHPYDEQPGMEKYARLPPAW 339
           AI+ A+ GD+EE++RL  V+  PY E P  E+YA+LPP W
Sbjct: 440 AIEFAERGDFEEMQRLATVLASPYAEHPEFERYAKLPPEW 479

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>Y1089_VIBVY (Q7MMI2) UPF0061 protein VV1089|
          Length = 490

 Score = 87.0 bits (214), Expect = 5e-17
 Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 6/91 (6%)
 Frame = -2

Query: 593 KEAWISWVQTYIEELVASGVSDEERKAAMNR------VNPKYVLRNYLCQTAIDAADLGD 432
           ++A   W+  Y+E +     +  E K+A  R      VNPKY+LRNYL Q AID A  GD
Sbjct: 390 RDAARGWLSRYLERVALEQTASGEAKSAQQRCEQMRAVNPKYILRNYLAQQAIDKAQQGD 449

Query: 431 YEEVRRLLKVMEHPYDEQPGMEKYARLPPAW 339
           + EV  L K++++PYDEQ  ME YA LPP W
Sbjct: 450 FSEVHTLAKLLKNPYDEQAEMEAYAHLPPEW 480

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>Y039_VIBVU (Q8DG12) UPF0061 protein VV1_0039|
          Length = 490

 Score = 87.0 bits (214), Expect = 5e-17
 Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 6/91 (6%)
 Frame = -2

Query: 593 KEAWISWVQTYIEELVASGVSDEERKAAMNR------VNPKYVLRNYLCQTAIDAADLGD 432
           ++A   W+  Y+E +     +  E K+A  R      VNPKY+LRNYL Q AID A  GD
Sbjct: 390 RDAAHGWLSRYLERVAMEQTASGEAKSAQQRCEQMRAVNPKYILRNYLAQQAIDKAQQGD 449

Query: 431 YEEVRRLLKVMEHPYDEQPGMEKYARLPPAW 339
           + EV  L K++++PYDEQ  ME YA LPP W
Sbjct: 450 FSEVHTLAKLLKNPYDEQAEMEAYAHLPPEW 480

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>Y5068_PSEPK (Q88CW2) UPF0061 protein PP5068|
          Length = 486

 Score = 85.9 bits (211), Expect = 1e-16
 Identities = 40/80 (50%), Positives = 52/80 (65%)
 Frame = -2

Query: 578 SWVQTYIEELVASGVSDEERKAAMNRVNPKYVLRNYLCQTAIDAADLGDYEEVRRLLKVM 399
           +W   Y+        + E R+  M+ VNP YVLRNYL Q AI+AA+ GDY EVRRL +V+
Sbjct: 397 AWGADYLARCGREPGNAEGRRERMHAVNPLYVLRNYLAQKAIEAAEAGDYSEVRRLHQVL 456

Query: 398 EHPYDEQPGMEKYARLPPAW 339
             P++EQPGM+ YA  PP W
Sbjct: 457 ARPFEEQPGMQAYAERPPEW 476

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>Y2392_XANAC (Q8PJY5) UPF0061 protein XAC2392|
          Length = 518

 Score = 85.5 bits (210), Expect = 1e-16
 Identities = 43/89 (48%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
 Frame = -2

Query: 575 WVQTYIEELVASGVSDEERKAAMNRVNPKYVLRNYLCQTAIDAADLGDYEEVRRLLKVME 396
           W+Q Y   L    +  + R+A M   NP+YVLRNYL Q AID A+ GD   V+ LL+VM 
Sbjct: 426 WLQRYAARLQQDPLPPDARRARMRLANPRYVLRNYLAQQAIDRAEQGDPSGVQELLEVMR 485

Query: 395 HPYDEQPGMEKYARLPPAWAY-RPGVCML 312
           HPYD+QPG + +A   P WA  R G  ML
Sbjct: 486 HPYDDQPGRDAFAARRPEWARDRAGCSML 514

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>Y2284_XANCP (Q8P8F8) UPF0061 protein XCC2284|
          Length = 518

 Score = 84.7 bits (208), Expect = 2e-16
 Identities = 43/90 (47%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
 Frame = -2

Query: 578 SWVQTYIEELVASGVSDEERKAAMNRVNPKYVLRNYLCQTAIDAADLGDYEEVRRLLKVM 399
           +W+Q Y    +  G SD  R + M   NP+YVLRNYL Q AID A+ GD   V  LL+VM
Sbjct: 425 AWLQRYAARCLQDGASDAVRASRMRAANPRYVLRNYLAQQAIDQAEQGDLSGVHALLEVM 484

Query: 398 EHPYDEQPGMEKYARLPPAWAY-RPGVCML 312
           + PYD+QP  E +A   P WA  R G  ML
Sbjct: 485 QRPYDDQPRRESFAAKRPDWARDRAGCSML 514

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>Y1992_XYLFT (Q87A39) UPF0061 protein PD1992|
          Length = 519

 Score = 75.9 bits (185), Expect = 1e-13
 Identities = 42/89 (47%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
 Frame = -2

Query: 575 WVQTYIEELVASGVSDEERKAAMNRVNPKYVLRNYLCQTAIDAADLGDYEEVRRLLKVME 396
           W+Q Y   L    +   ER   M   NP+YVLRNYL Q AI+ A+ GD  E+  LL+VM 
Sbjct: 427 WLQRYAARLSVDPLPVAERHERMRLANPRYVLRNYLTQQAIECAEQGDLTELHALLEVMR 486

Query: 395 HPYDEQPGMEKYARLPPAWA-YRPGVCML 312
            PYD Q G E YA   P WA  R G  ML
Sbjct: 487 RPYDFQLGREAYAMRRPEWARSRIGCSML 515

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>Y2619_XYLFA (Q9PA99) UPF0061 protein Xf2619|
          Length = 519

 Score = 75.1 bits (183), Expect = 2e-13
 Identities = 42/89 (47%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
 Frame = -2

Query: 575 WVQTYIEELVASGVSDEERKAAMNRVNPKYVLRNYLCQTAIDAADLGDYEEVRRLLKVME 396
           W+Q Y   L    +   ER   M   NP+YVLRNYL Q AI+ A+ GD  E+  LL+VM 
Sbjct: 427 WLQRYAARLSVDPLPVAERHERMRLANPRYVLRNYLTQQAIECAEQGDLIELHALLEVMR 486

Query: 395 HPYDEQPGMEKYARLPPAWA-YRPGVCML 312
            PYD Q G E YA   P WA  R G  ML
Sbjct: 487 RPYDFQLGREAYAMRRPEWARSRIGCSML 515

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>SELO_MOUSE (Q9DBC0) Selenoprotein O|
          Length = 667

 Score = 74.7 bits (182), Expect = 2e-13
 Identities = 44/112 (39%), Positives = 61/112 (54%), Gaps = 20/112 (17%)
 Frame = -2

Query: 611 DIGKERKEAWISWVQTYIEEL--VASGVSDE-----ERKAAMNRVNPKYVLRNYLCQTAI 453
           D+ ++ ++ W +W+Q Y + L     GV D      ER   M   NPKYVLRNY+ Q AI
Sbjct: 547 DLQRKNRDHWEAWLQEYRDRLDKEKEGVGDTAAWQAERVRVMRANNPKYVLRNYIAQKAI 606

Query: 452 DAADLGDYEEVRRLLKVMEHPY---DEQPGME----------KYARLPPAWA 336
           +AA+ GD+ EVR +LK++E PY   +E  G E           Y+  PP WA
Sbjct: 607 EAAENGDFSEVRLVLKLLESPYHSEEEATGPEAVARSTEEQSSYSNRPPLWA 658

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>Y1748_RALSO (Q8XYL0) UPF0061 protein RSc1748|
          Length = 525

 Score = 73.9 bits (180), Expect = 4e-13
 Identities = 36/81 (44%), Positives = 45/81 (55%)
 Frame = -2

Query: 578 SWVQTYIEELVASGVSDEERKAAMNRVNPKYVLRNYLCQTAIDAADLGDYEEVRRLLKVM 399
           +W+  Y + L      D  R  AM RVNPKYVLRN+L + AI  A   D+ EV  L  V+
Sbjct: 436 AWLAAYRQRLQTEPAPDAARAEAMRRVNPKYVLRNHLAEIAIRRAGEKDFSEVENLRAVL 495

Query: 398 EHPYDEQPGMEKYARLPPAWA 336
             P+D+ PG E YA   P WA
Sbjct: 496 ARPFDDHPGFEHYAGPAPDWA 516

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>Y2107_BORBR (Q7WKJ9) UPF0061 protein BB2107|
          Length = 495

 Score = 72.8 bits (177), Expect = 9e-13
 Identities = 36/81 (44%), Positives = 49/81 (60%)
 Frame = -2

Query: 578 SWVQTYIEELVASGVSDEERKAAMNRVNPKYVLRNYLCQTAIDAADLGDYEEVRRLLKVM 399
           +W         + G + + R AAM+ VNP YVLRN+L + AI AA  GD  E+  LLK++
Sbjct: 406 AWYDRLAARHASDGRAAQARAAAMDEVNPLYVLRNHLAEQAIRAAARGDAGEIDILLKLL 465

Query: 398 EHPYDEQPGMEKYARLPPAWA 336
            +PY +QPG + YA L P WA
Sbjct: 466 RNPYKQQPGYDAYAGLAPDWA 486

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>Y1919_BORPA (Q7W954) UPF0061 protein BPP1919|
          Length = 495

 Score = 72.8 bits (177), Expect = 9e-13
 Identities = 36/81 (44%), Positives = 49/81 (60%)
 Frame = -2

Query: 578 SWVQTYIEELVASGVSDEERKAAMNRVNPKYVLRNYLCQTAIDAADLGDYEEVRRLLKVM 399
           +W         + G + + R AAM+ VNP YVLRN+L + AI AA  GD  E+  LLK++
Sbjct: 406 AWYDRLAARHASDGRAAQARAAAMDEVNPLYVLRNHLAEQAIRAAARGDAGEIDILLKLL 465

Query: 398 EHPYDEQPGMEKYARLPPAWA 336
            +PY +QPG + YA L P WA
Sbjct: 466 RNPYKQQPGYDAYAGLAPDWA 486

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>Y1090_BORPE (Q7VZ47) UPF0061 protein BP1090|
          Length = 487

 Score = 72.0 bits (175), Expect = 2e-12
 Identities = 36/81 (44%), Positives = 48/81 (59%)
 Frame = -2

Query: 578 SWVQTYIEELVASGVSDEERKAAMNRVNPKYVLRNYLCQTAIDAADLGDYEEVRRLLKVM 399
           +W         + G + + R AAM+ VNP YVLRN+L + AI AA  GD  E+  LLK++
Sbjct: 398 AWYDRLAARHASDGRAAQARAAAMDEVNPLYVLRNHLAEQAIRAAARGDAGEIDILLKLL 457

Query: 398 EHPYDEQPGMEKYARLPPAWA 336
            +PY  QPG + YA L P WA
Sbjct: 458 RNPYKHQPGYDAYAGLAPDWA 478

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>YDIU_SALTY (Q8ZPS5) UPF0061 protein ydiU|
          Length = 480

 Score = 71.2 bits (173), Expect = 3e-12
 Identities = 39/101 (38%), Positives = 55/101 (54%)
 Frame = -2

Query: 632 PIKAALLDIGKERKEAWISWVQTYIEELVASGVSDEERKAAMNRVNPKYVLRNYLCQTAI 453
           P++   +D     + A+ +W   Y   L    V D  R+  M RVNP  VLRN+L Q AI
Sbjct: 380 PLRDTFID-----RAAFDAWFDRYRARLRTEAVDDALRQQQMQRVNPAIVLRNWLAQRAI 434

Query: 452 DAADLGDYEEVRRLLKVMEHPYDEQPGMEKYARLPPAWAYR 330
           DAA+ GD  E+ RL +V+  P+ ++   + YAR PP W  R
Sbjct: 435 DAAEQGDMAELHRLHEVLRQPFTDRD--DDYARRPPEWGKR 473

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>YDIU_SALTI (Q8Z6I8) UPF0061 protein ydiU|
          Length = 480

 Score = 68.9 bits (167), Expect = 1e-11
 Identities = 38/101 (37%), Positives = 54/101 (53%)
 Frame = -2

Query: 632 PIKAALLDIGKERKEAWISWVQTYIEELVASGVSDEERKAAMNRVNPKYVLRNYLCQTAI 453
           P++   +D     + A+ +W   Y   L    V D  R+  M RVNP  VLRN+L Q AI
Sbjct: 380 PLRDTFID-----RAAFDAWFDRYRARLRTEAVDDALRQQQMQRVNPAIVLRNWLAQRAI 434

Query: 452 DAADLGDYEEVRRLLKVMEHPYDEQPGMEKYARLPPAWAYR 330
           DAA+ GD  E+ RL +V+  P+ ++   + YA  PP W  R
Sbjct: 435 DAAEQGDMAELHRLHEVLRQPFTDRD--DDYASRPPEWGKR 473

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>SELO_HUMAN (Q9BVL4) Selenoprotein O|
          Length = 669

 Score = 67.8 bits (164), Expect = 3e-11
 Identities = 40/106 (37%), Positives = 51/106 (48%), Gaps = 23/106 (21%)
 Frame = -2

Query: 584 WISWVQTYIEELVAS--GVSDE-----ERKAAMNRVNPKYVLRNYLCQTAIDAADLGDYE 426
           W  W+Q Y   L     G  D      E    M+  NPKYVLRNY+ Q AI+AA+ GD+ 
Sbjct: 555 WADWLQAYRARLDKDLEGAGDAAAWQAEHVRVMHANNPKYVLRNYIAQNAIEAAERGDFS 614

Query: 425 EVRRLLKVMEHPYDEQPG----------------MEKYARLPPAWA 336
           EVRR+LK++E PY  + G                   Y+  PP WA
Sbjct: 615 EVRRVLKLLETPYHCEAGAATDAEATEADGADGRQRSYSSKPPLWA 660

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>Y330_SHEON (Q8EJX6) UPF0061 protein SO0330|
          Length = 484

 Score = 65.5 bits (158), Expect = 1e-10
 Identities = 36/81 (44%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
 Frame = -2

Query: 578 SWVQTYIEELVASGVSDEER-KAAMNRVNPKYVLRNYLCQTAIDAADLGDYEEVRRLLKV 402
           +W Q Y   L    V+D E  +   NRVNPKY+LRNYL Q AI A D G+  +++RL +V
Sbjct: 396 AWYQVYQARL--GKVTDVEAWQQQCNRVNPKYILRNYLAQEAIIAVDEGNLAQLQRLHQV 453

Query: 401 MEHPYDEQPGMEKYARLPPAW 339
           +  P+ EQ   E+ A+ PP W
Sbjct: 454 LRQPFTEQIEHEELAKRPPDW 474

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>YDIU_SHIFL (Q83L33) UPF0061 protein ydiU|
          Length = 478

 Score = 65.1 bits (157), Expect = 2e-10
 Identities = 36/101 (35%), Positives = 53/101 (52%)
 Frame = -2

Query: 632 PIKAALLDIGKERKEAWISWVQTYIEELVASGVSDEERKAAMNRVNPKYVLRNYLCQTAI 453
           P++   +D     + A+  W   Y   L    VSD ER+  M  VNP  VLRN+L Q AI
Sbjct: 378 PLREEFID-----RAAFDDWFARYRGRLQQDEVSDSERQQLMQSVNPALVLRNWLAQRAI 432

Query: 452 DAADLGDYEEVRRLLKVMEHPYDEQPGMEKYARLPPAWAYR 330
           +AA+ GD  E+ RL + + +P+ ++   + Y   PP W  R
Sbjct: 433 EAAEKGDMMELHRLHEALRNPFSDRD--DDYVSRPPDWGKR 471

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>YDIU_ECOLI (P77649) UPF0061 protein ydiU|
          Length = 478

 Score = 65.1 bits (157), Expect = 2e-10
 Identities = 34/88 (38%), Positives = 48/88 (54%)
 Frame = -2

Query: 593 KEAWISWVQTYIEELVASGVSDEERKAAMNRVNPKYVLRNYLCQTAIDAADLGDYEEVRR 414
           + A+  W   Y   L    VSD ER+  M  VNP  VLRN+L Q AI+AA+ GD  E+ R
Sbjct: 386 RAAFDDWFARYRGRLQQDEVSDSERQQLMQSVNPALVLRNWLAQRAIEAAEKGDMTELHR 445

Query: 413 LLKVMEHPYDEQPGMEKYARLPPAWAYR 330
           L + + +P+ ++   + Y   PP W  R
Sbjct: 446 LHEALRNPFSDRD--DDYVSRPPDWGKR 471

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>YDIU_ECO57 (Q8X5W3) UPF0061 protein ydiU|
          Length = 478

 Score = 65.1 bits (157), Expect = 2e-10
 Identities = 34/88 (38%), Positives = 48/88 (54%)
 Frame = -2

Query: 593 KEAWISWVQTYIEELVASGVSDEERKAAMNRVNPKYVLRNYLCQTAIDAADLGDYEEVRR 414
           + A+  W   Y   L    VSD ER+  M  VNP  VLRN+L Q AI+AA+ GD  E+ R
Sbjct: 386 RAAFDDWFARYRGRLQQDEVSDSERQQLMQSVNPALVLRNWLAQRAIEAAEKGDMTELHR 445

Query: 413 LLKVMEHPYDEQPGMEKYARLPPAWAYR 330
           L + + +P+ ++   + Y   PP W  R
Sbjct: 446 LHEALRNPFSDRD--DDYVSRPPDWGKR 471

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>YDIU_ECOL6 (Q8FH30) UPF0061 protein ydiU|
          Length = 478

 Score = 60.8 bits (146), Expect = 4e-09
 Identities = 31/88 (35%), Positives = 47/88 (53%)
 Frame = -2

Query: 593 KEAWISWVQTYIEELVASGVSDEERKAAMNRVNPKYVLRNYLCQTAIDAADLGDYEEVRR 414
           + A+  W   Y   L    ++D ER+  M  VNP  VLRN+L Q AI+AA+  D  E+ R
Sbjct: 386 RAAFDDWFARYRGRLQQDEITDSERQQLMQSVNPALVLRNWLAQRAIEAAEKDDMTELHR 445

Query: 413 LLKVMEHPYDEQPGMEKYARLPPAWAYR 330
           L + + +P+ ++   + Y   PP W  R
Sbjct: 446 LHEALRNPFSDRD--DDYVSRPPDWGKR 471

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>Y4142_BRAJA (Q89MQ0) UPF0061 protein bll4142|
          Length = 491

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 31/81 (38%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
 Frame = -2

Query: 587 AWISWVQTYIEELVASGVSDEERKAAMNRVNPKYVLRNYLCQTAIDAADLGD-YEEVRRL 411
           A+  W + + E L A   S  ER+ AMN VNP ++ RN+  +  I AA   D Y     L
Sbjct: 398 AFDEWARRWRERLAAEPQSAAERQTAMNAVNPLFIPRNHRVEAVIQAAVNDDNYALFEEL 457

Query: 410 LKVMEHPYDEQPGMEKYARLP 348
           +KV+  PY++QP    YA  P
Sbjct: 458 VKVLAKPYEDQPDYAAYADPP 478

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>Y982_RHIME (Q92RB2) UPF0061 protein R00982|
          Length = 490

 Score = 52.8 bits (125), Expect = 1e-06
 Identities = 38/118 (32%), Positives = 53/118 (44%), Gaps = 5/118 (4%)
 Frame = -2

Query: 686 LLSNVKADRDIPETELLVPIKAALLDIGK----ERKEAWISWVQTYIEELVASGVSDEER 519
           L+ N KAD  +    L    + A  D       E  +A   W++ +   L        ER
Sbjct: 360 LMQNGKADFTLTFRRLAASAENATADTELASLFEEPQALSPWLEHWRRRLEREPQPATER 419

Query: 518 KAAMNRVNPKYVLRNYLCQTAIDAA-DLGDYEEVRRLLKVMEHPYDEQPGMEKYARLP 348
            AAM  VNP ++ RN+  + AI AA +  D+     LL V   PY++QPG   YA  P
Sbjct: 420 AAAMRSVNPAFIPRNHRVEQAIAAATEDADFSLFEALLDVTSRPYEDQPGHAAYAAPP 477

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>YU61_VIBMA (Q9RA11) UPF0061 protein ORF18|
          Length = 557

 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 35/96 (36%), Positives = 45/96 (46%), Gaps = 9/96 (9%)
 Frame = -2

Query: 584 WISWVQTYIEELV----ASGVSD---EERKAAMNRVNPKYVLRNYLCQTAIDAADLGDYE 426
           WI W++ +   L     A G+S    E+    M  VNPKYVLR +    A   A  GDY 
Sbjct: 453 WIEWLEKWQMLLNSTCDAKGISSRASEDIAMQMKLVNPKYVLREWFVMPAYQQATAGDYS 512

Query: 425 EVRRLLKVMEHPYDEQPG--MEKYARLPPAWAYRPG 324
            ++ L  VM  PY EQ     +KY RL P   +  G
Sbjct: 513 LIQELQAVMTQPYAEQSKELEDKYYRLKPLEFFEVG 548

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>Y1733_CHRVO (Q7NX94) UPF0061 protein CV_1733|
          Length = 478

 Score = 47.4 bits (111), Expect = 4e-05
 Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
 Frame = -2

Query: 590 EAWISWVQTYIEELVASGVSDEERKAAMNRVNPKYVLRNYLCQTAIDAA-DLGDYEEVRR 414
           +A   W++ +    V       +  AAM R +P Y+ RN+L + A+DAA + GD     +
Sbjct: 383 DALTPWLKQWHARHVPRTRRPPDIAAAMRRESPLYIPRNHLVEEALDAASERGDMGPTLK 442

Query: 413 LLKVMEHPYDEQPGMEKYAR 354
           LL+ +  P+ E+ G+++YA+
Sbjct: 443 LLEALHQPFAERDGLDRYAQ 462

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>YE35_SCHPO (O13890) UPF0061 protein C20G4.05c|
          Length = 568

 Score = 47.4 bits (111), Expect = 4e-05
 Identities = 24/82 (29%), Positives = 43/82 (52%)
 Frame = -2

Query: 608 IGKERKEAWISWVQTYIEELVASGVSDEERKAAMNRVNPKYVLRNYLCQTAIDAADLGDY 429
           +  E  +A+ +WV  Y E        D  R A+M +VNP + LRN++ +  I  A +G +
Sbjct: 466 VRNESVKAFTNWVGRYSEATKTQ--EDSSRLASMKKVNPHFTLRNWVLEEVIKEAYIGKF 523

Query: 428 EEVRRLLKVMEHPYDEQPGMEK 363
           E  +++ K+   P+++  G  K
Sbjct: 524 ELFKKVCKMAACPFEDTWGFSK 545

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>Y035_CLOPE (Q06373) UPF0061 protein CPE0035 (ORF 2)|
          Length = 490

 Score = 47.0 bits (110), Expect = 5e-05
 Identities = 23/77 (29%), Positives = 39/77 (50%)
 Frame = -2

Query: 578 SWVQTYIEELVASGVSDEERKAAMNRVNPKYVLRNYLCQTAIDAADLGDYEEVRRLLKVM 399
           +W   +   L       EE +  M   NP  + RN+L + A+  A+ GD+  +  LL+ +
Sbjct: 401 TWYALWQNRLKEENRPQEEVRNLMMNNNPYIIPRNHLVEEALKNAEKGDFTFMDNLLEAL 460

Query: 398 EHPYDEQPGMEKYARLP 348
           ++PY     +EKY +LP
Sbjct: 461 KNPYSYSKDLEKYTKLP 477

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>Y945_AGRT5 (Q8UGU0) UPF0061 protein Atu0945/AGR_C_1725|
          Length = 487

 Score = 47.0 bits (110), Expect = 5e-05
 Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
 Frame = -2

Query: 539 GVSDEERKAAMNRVNPKYVLRNYLCQTAIDAA-DLGDYEEVRRLLKVMEHPYDEQPGMEK 363
           G+SD ER AAM  +NP  + RN+  +  I+AA + GD+E    +L  +  P++E+P    
Sbjct: 410 GISDSERSAAMLSINPAIIPRNHRIEELIEAAVEDGDFEPFHAMLTAIATPFEERPDNFV 469

Query: 362 YARLP 348
           Y + P
Sbjct: 470 YMQPP 474

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>Y3939_BACHD (Q9K5Z6) UPF0061 protein BH3939|
          Length = 492

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
 Frame = -2

Query: 611 DIGKERKEAWISWVQTYIEELVASGVSDEERKAAMNRVNPKYVLRNYLCQTAIDAA-DLG 435
           + G   K  +  W + +   L     + ++    M   NP  + RN+  + A++AA +  
Sbjct: 391 ETGLHDKLEFTEWHERWQARLGRQEQTKDDSHNLMKMSNPAVIPRNHRVEEALEAAVEQE 450

Query: 434 DYEEVRRLLKVMEHPYDEQPGMEKYARLP 348
           DY+ + RLLKV+ +P+   P  + YA+LP
Sbjct: 451 DYQVMERLLKVLANPFAHSPEQKAYAKLP 479

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>Y1893_COREF (Q8FP92) UPF0061 protein CE1893|
          Length = 492

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 24/71 (33%), Positives = 36/71 (50%)
 Frame = -2

Query: 557 EELVASGVSDEERKAAMNRVNPKYVLRNYLCQTAIDAADLGDYEEVRRLLKVMEHPYDEQ 378
           EE +   ++ +     M + NP YV RN+L + A+  A  G +E    LL ++  P+  Q
Sbjct: 409 EEWIPRWLAAQPDLINMQKTNPVYVPRNHLVEDALAEAVEGRWEAFTTLLGLVTDPFTRQ 468

Query: 377 PGMEKYARLPP 345
            GME Y R  P
Sbjct: 469 AGMEVYERPGP 479

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>Y3567_BACAN (Q81YI0) UPF0061 protein BA3567/GBAA3567/BAS3307|
          Length = 488

 Score = 40.8 bits (94), Expect = 0.004
 Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
 Frame = -2

Query: 575 WVQTYIEELVASGVSDEERKAAMNRVNPKYVLRNYLCQTAIDAADL-GDYEEVRRLLKVM 399
           W + +   L     S E     M   NP  + RN+  + A++AA   GDY  + +LL+ +
Sbjct: 399 WYKLWQSRLERQEESKENAYEMMKNNNPSIIPRNHRVEEALEAAVTNGDYSVMEKLLEAL 458

Query: 398 EHPYDEQPGMEKYARLPPAWAYRP 327
            +PY      E+Y  +PP    RP
Sbjct: 459 SNPYAYATEQEEYC-VPPVPTNRP 481

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>Y3499_BACCR (Q813A5) UPF0061 protein BC_3499|
          Length = 488

 Score = 39.7 bits (91), Expect = 0.009
 Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
 Frame = -2

Query: 575 WVQTYIEELVASGVSDEERKAAMNRVNPKYVLRNYLCQTAIDAADLG-DYEEVRRLLKVM 399
           W + +   L     S E     M   NP  + RN+  + A++AA    DY  + +LL+ +
Sbjct: 399 WYKLWQSRLDRQEQSKENAYEMMKNNNPSIIPRNHRVEEALEAAVTNDDYSVMEKLLEAL 458

Query: 398 EHPYDEQPGMEKYARLPPAWAYRP 327
            +PY      E+Y   PPA   RP
Sbjct: 459 SNPYAYSTDQEEYC-APPAPTNRP 481

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>Y1999_CORGL (Q8NP26) UPF0061 protein Cgl1999/cg2190|
          Length = 474

 Score = 37.7 bits (86), Expect = 0.033
 Identities = 20/55 (36%), Positives = 32/55 (58%)
 Frame = -2

Query: 512 AMNRVNPKYVLRNYLCQTAIDAADLGDYEEVRRLLKVMEHPYDEQPGMEKYARLP 348
           AM  VNP ++ RN+L + A+  A  G+ E+   LL  + +P+D   G ++  RLP
Sbjct: 406 AMRAVNPLFIPRNHLVEAALADAVEGNLEKFHELLAAVTNPFDPTAGPDE-LRLP 459

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>BLM10_YEAST (P43583) Proteasome activator BLM10 (Bleomycin resistance protein|
            BLM10)
          Length = 2143

 Score = 33.1 bits (74), Expect = 0.82
 Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
 Frame = -2

Query: 545  ASGVSDEERKAAMNRVNPKYVLRNYLCQTAIDAADLGD-YEEVRRLLKVMEHPYDE 381
            A G+ D E  AA ++ +  Y+LR+ L      A D+G  ++E+     V +HPYD+
Sbjct: 1746 ADGMFDRESDAATHQTSKIYMLRSILMSMEFRAPDVGKLFDEL-----VFDHPYDQ 1796

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>YCF49_CYACA (Q9TM18) Hypothetical 11.6 kDa protein ycf49|
          Length = 97

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = -1

Query: 342 LGIQAWGVHAILLVMKHNQLRLIYSVVYFFGLYRRFTL*DVVFL 211
           L +  W +H + LV     +RLIY   YF+ + R F    ++ +
Sbjct: 4   LSLPTWNIHIVTLVEWSIVIRLIYLFTYFYDIPRSFNFLIIILM 47

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>LIN12_CAEEL (P14585) Protein lin-12 precursor (Abnormal cell lineage protein 12)|
          Length = 1429

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
 Frame = +1

Query: 34   YPT-QEFSTGNITLGSFRYGELHFPTAPERLNALPLKAKATNN-SITKFLTSRCTN 195
            YP  Q +  GN  LG F +  L  PT PE  + + L  +A  + +IT+ +T    N
Sbjct: 991  YPNPQGYGNGNDFLGDFNHTNLQIPTEPEPESPIKLHTEAAGSYAITEPITRESVN 1046

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>FD2_DROME (Q02360) Fork head domain protein FD2|
          Length = 365

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 15/48 (31%), Positives = 27/48 (56%)
 Frame = +2

Query: 509 LPLSFLHQRHR*PPVPQYMFVPN*SMLLFFLSQYPGVQLLLEQVAQFL 652
           LP+SFLH  HR P  P + ++   +++   +S  P  +L L  + +F+
Sbjct: 78  LPISFLHNSHR-PEKPPFSYI---ALIAMAISSAPNQRLTLSGIYKFI 121

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>GPR39_HUMAN (O43194) Probable G-protein coupled receptor 39|
          Length = 453

 Score = 29.6 bits (65), Expect = 9.0
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = -3

Query: 358 PACHRPGHTGLGCACYPARHETQPAATNIQCC 263
           P  + P H GL C     RH  QP  +N+  C
Sbjct: 179 PLVNVPSHRGLTCNRSSTRHHEQPETSNMSIC 210


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 104,279,812
Number of Sequences: 219361
Number of extensions: 2240914
Number of successful extensions: 5493
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 5319
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5483
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6825954960
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result