>IF41_WHEAT (Q03387) Eukaryotic initiation factor iso-4F subunit p82-34|
           (eIF-(iso)4F p82-34)
          Length = 788

 Score = 47.0 bits (110), Expect = 6e-05
 Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
 Frame = -1

Query: 700 KISKLLEEYNTGGDLKEACQCIRDLGMPFFNHEVVKKALVMAMEKQNE--ASILALLQEC 527
           K + LLEEY     L EA QCI +L  P ++ E+VK+A+ +A++K       ++ LL+  
Sbjct: 626 KTASLLEEYFGIRILDEAQQCIEELQSPDYHPEIVKEAINLALDKGASFVDPLVKLLEHL 685

Query: 526 SGEGLITINQMTNGFARVKEGLDDLTLDIPNAQEKF 419
             +       + NG       L+D+ +D+P A  +F
Sbjct: 686 YTKKTFKTEDLENGCLLYGSLLEDIGIDLPKAPTQF 721

>IF4G1_MOUSE (Q6NZJ6) Eukaryotic translation initiation factor 4 gamma 1|
            (eIF-4-gamma 1) (eIF-4G1) (eIF-4G 1)
          Length = 1600

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
 Frame = -1

Query: 718  VEDAKDKISKLLEEYNTGGDLKEACQCIRDLGMPFFNHEVVKKALVMAMEKQNEA--SIL 545
            V++ + K   ++EEY    D+KEA QC+++L  P      V+  +   +E+   A   + 
Sbjct: 1239 VDEVEKKSKAIIEEYLHLNDMKEAVQCVQELASPSLLFIFVRLGIESTLERSTIAREHMG 1298

Query: 544  ALLQECSGEGLITINQMTNGFARVKEGLDDLTLDIPN 434
             LL +    G ++  Q   G     E  +D+ +DIP+
Sbjct: 1299 RLLHQLLCAGHLSTAQYYQGLYETLELAEDMEIDIPH 1335

>IF4G1_HUMAN (Q04637) Eukaryotic translation initiation factor 4 gamma 1|
            (eIF-4-gamma 1) (eIF-4G1) (eIF-4G 1) (p220)
          Length = 1600

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
 Frame = -1

Query: 715  EDAKDKISKLLEEYNTGGDLKEACQCIRDLGMP-----FFNHEVVKKALVMAMEKQNEAS 551
            E+ + K   ++EEY    D+KEA QC+++L  P     F  H V       A+ +++   
Sbjct: 1241 EELEKKSKAIIEEYLHLNDMKEAVQCVQELASPSLLFIFVRHGVESTLERSAIAREHMGQ 1300

Query: 550  ILALLQECSGEGLITINQMTNGFARVKEGLDDLTLDIPN 434
            +L  L  C+G   ++  Q   G   + E  +D+ +DIP+
Sbjct: 1301 LLHQLL-CAGH--LSTAQYYQGLYEILELAEDMEIDIPH 1336

>IF4G1_RABIT (P41110) Eukaryotic translation initiation factor 4 gamma 1|
            (eIF-4-gamma 1) (eIF-4G1) (eIF-4G 1) (p220)
          Length = 1402

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
 Frame = -1

Query: 715  EDAKDKISKLLEEYNTGGDLKEACQCIRDLGMPFFNHEVVKKALVMAMEKQNEA--SILA 542
            E+ + K   ++EEY    D+KEA QC+++L  P      V+  +   +E+   A   +  
Sbjct: 1043 EELEKKSKAIIEEYLHLNDMKEAVQCVQELASPSLLFIFVRHGIESTLERSAIARERMGQ 1102

Query: 541  LLQECSGEGLITINQMTNGFARVKEGLDDLTLDIPN 434
            LL +    G ++  Q   G   + E  +D+ +DIP+
Sbjct: 1103 LLHQLLCAGHLSTAQYYQGLYEILELAEDMEIDIPH 1138

>IF4G2_HUMAN (P78344) Eukaryotic translation initiation factor 4 gamma 2|
           (eIF-4-gamma 2) (eIF-4G 2) (eIF4G 2) (p97)
           (Death-associated protein 5) (DAP-5)
          Length = 907

 Score = 40.8 bits (94), Expect = 0.004
 Identities = 27/101 (26%), Positives = 55/101 (54%), Gaps = 10/101 (9%)
 Frame = -1

Query: 709 AKDKISKLLE----EYNTGGDLKEACQCIRDLGMP-FFNHEVVKKALVMAMEKQNE---- 557
           +K+++ KL E    EY   G+  EA   +R++  P  F  E++ K +++++++ +E    
Sbjct: 540 SKEELLKLTETVVTEYLNSGNANEAVNGVREMRAPKHFLPEMLSKVIILSLDRSDEDKEK 599

Query: 556 -ASILALLQECSGEGLITINQMTNGFARVKEGLDDLTLDIP 437
            +S+++LL++   EG+ T +     F  V +    L +DIP
Sbjct: 600 ASSLISLLKQ---EGIATSDNFMQAFLNVLDQCPKLEVDIP 637

>IF4G2_BOVIN (Q95L46) Eukaryotic translation initiation factor 4 gamma 2|
           (eIF-4-gamma 2) (eIF-4G 2) (eIF4G 2) (p97) (Fragment)
          Length = 136

 Score = 40.8 bits (94), Expect = 0.004
 Identities = 27/101 (26%), Positives = 55/101 (54%), Gaps = 10/101 (9%)
 Frame = -1

Query: 709 AKDKISKLLE----EYNTGGDLKEACQCIRDLGMP-FFNHEVVKKALVMAMEKQNE---- 557
           +K+++ KL E    EY   G+  EA   +R++  P  F  E++ K +++++++ +E    
Sbjct: 27  SKEELLKLTETVVTEYLNSGNANEAVNGVREMRAPKHFLPEMLSKVIILSLDRSDEDKEK 86

Query: 556 -ASILALLQECSGEGLITINQMTNGFARVKEGLDDLTLDIP 437
            +S+++LL++   EG+ T +     F  V +    L +DIP
Sbjct: 87  ASSLISLLKQ---EGIATSDNFMQAFLNVLDQCPKLEVDIP 124

>IF4G2_MOUSE (Q62448) Eukaryotic translation initiation factor 4 gamma 2|
           (eIF-4-gamma 2) (eIF-4G 2) (eIF4G 2) (p97) (Novel
           APOBEC-1 target 1) (Translation repressor NAT1)
          Length = 906

 Score = 39.7 bits (91), Expect = 0.009
 Identities = 26/101 (25%), Positives = 55/101 (54%), Gaps = 10/101 (9%)
 Frame = -1

Query: 709 AKDKISKLLE----EYNTGGDLKEACQCIRDLGMP-FFNHEVVKKALVMAMEKQNE---- 557
           +K+++ KL E    +Y   G+  +A   +R++  P  F  E++ K +++++++ +E    
Sbjct: 539 SKEELLKLTEAVVTDYLNSGNANDAVSGVREMRAPKHFLPEMLSKVIILSLDRSDEDKEK 598

Query: 556 -ASILALLQECSGEGLITINQMTNGFARVKEGLDDLTLDIP 437
            +S+++LL++   EG+ T +     F  V E    L +DIP
Sbjct: 599 ASSLISLLKQ---EGIATSDNFMQAFLNVLEQCPKLEVDIP 636

>IF4G3_MOUSE (Q80XI3) Eukaryotic translation initiation factor 4 gamma 3|
            (eIF-4-gamma 3) (eIF-4G 3) (eIF4G 3) (eIF-4-gamma II)
            (eIF4GII)
          Length = 1579

 Score = 38.1 bits (87), Expect = 0.027
 Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
 Frame = -1

Query: 715  EDAKDKISKLLEEYNTGGDLKEACQCIRDLGMPFFNHEVVKKALVMAMEKQ--NEASILA 542
            E+ + K   +++E+    D KEA QCI +L      H  VK  +   +E+       +  
Sbjct: 1214 EEVERKSKSIIDEFLHINDFKEATQCIEELSAQGPLHVFVKVGVEFTLERSQITRDHMGH 1273

Query: 541  LLQECSGEGLITINQMTNGFARVKEGLDDLTLDIPN 434
            LL +      ++      GF+   E  DD+ +DIP+
Sbjct: 1274 LLYQLVQSEKLSKQDFFKGFSETLELADDMAIDIPH 1309

>IF4G3_HUMAN (O43432) Eukaryotic translation initiation factor 4 gamma 3|
            (eIF-4-gamma 3) (eIF-4G 3) (eIF4G 3) (eIF-4-gamma II)
            (eIF4GII)
          Length = 1585

 Score = 37.7 bits (86), Expect = 0.035
 Identities = 23/96 (23%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
 Frame = -1

Query: 715  EDAKDKISKLLEEYNTGGDLKEACQCIRDLGMPFFNHEVVKKALVMAMEKQ--NEASILA 542
            E+ + K   +++E+    D KEA QC+ +L      H  V+  +   +E+       +  
Sbjct: 1220 EELERKSKSIIDEFLHINDFKEAMQCVEELNAQGLLHVFVRVGVESTLERSQITRDHMGQ 1279

Query: 541  LLQECSGEGLITINQMTNGFARVKEGLDDLTLDIPN 434
            LL +      ++      GF+   E  DD+ +DIP+
Sbjct: 1280 LLYQLVQSEKLSKQDFFKGFSETLELADDMAIDIPH 1315

>FUSA_BURCE (P24126) Fusaric acid resistance protein fusA precursor|
          Length = 530

 Score = 35.0 bits (79), Expect = 0.23
 Identities = 24/63 (38%), Positives = 31/63 (49%)
 Frame = -3

Query: 548 LGSLAGVLRGGADNHQPDDQRFCSCQGRPRRSDP*HPKRAGEVQRLRGACDRARLAATFL 369
           LG+    +R G    QPDD+R      RP R+DP   + A E +R  G   R +L A   
Sbjct: 371 LGAANAGVRPGGRAIQPDDRRRAQGHRRPGRADP-FARYAEEGRRTLGGRQRPQLPAVAR 429

Query: 368 RLP 360
           RLP
Sbjct: 430 RLP 432

>MCF2L_MOUSE (Q64096) Guanine nucleotide exchange factor DBS (DBL's big sister)|
            (MCF2 transforming sequence-like protein)
          Length = 1149

 Score = 33.1 bits (74), Expect = 0.87
 Identities = 16/45 (35%), Positives = 25/45 (55%)
 Frame = +3

Query: 282  VKTAWV*DIQRYISSSLAVCWGRAQGREAKEGSSQPRSVASST*P 416
            +K AWV +I++ ++S L  C   +Q R  ++  S P    SST P
Sbjct: 933  IKAAWVNEIRKVLTSQLQACREASQHRALEQSHSLPLPTPSSTSP 977

>VIE4_FRG3V (P14358) Immediate-early protein ICP-46|
          Length = 394

 Score = 31.2 bits (69), Expect = 3.3
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +2

Query: 362 GGEGR*QPAALCRKLHVASELLLRVWDVKGQIVEAFLDTSK 484
           G EG      LCR    A   + R WDV+ +IV+ +LD ++
Sbjct: 262 GPEGEAHIEVLCRYFSDARVAMERAWDVRERIVQCYLDLTE 302

>ZIPA_HAEDU (Q7VMX6) Cell division protein zipA homolog|
          Length = 334

 Score = 30.4 bits (67), Expect = 5.7
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +2

Query: 173 LQVTDQYTQQPYHTPVYHTISAQ 241
           +Q T +YTQ P +TP+YH   AQ
Sbjct: 101 VQETAEYTQTPLNTPIYHNQPAQ 123

>GLMM_YERPS (Q66F64) Phosphoglucosamine mutase (EC 5.4.2.10)|
          Length = 446

 Score = 30.0 bits (66), Expect = 7.4
 Identities = 17/69 (24%), Positives = 35/69 (50%), Gaps = 7/69 (10%)
 Frame = -1

Query: 637 IRDLGMPFFNHEVVKKALVMAMEK-------QNEASILALLQECSGEGLITINQMTNGFA 479
           ++DLG+PF   +V  + ++ AM++       +N   ++ L +  +G+G++   Q+     
Sbjct: 294 LKDLGIPFVRAKVGDRYVLEAMQEKGWRIGAENSGHVILLDKTTTGDGIVAGLQVLTAMV 353

Query: 478 RVKEGLDDL 452
           R    L DL
Sbjct: 354 RNHMSLHDL 362

>GLMM_YERPE (Q8ZBB8) Phosphoglucosamine mutase (EC 5.4.2.10)|
          Length = 446

 Score = 30.0 bits (66), Expect = 7.4
 Identities = 17/69 (24%), Positives = 35/69 (50%), Gaps = 7/69 (10%)
 Frame = -1

Query: 637 IRDLGMPFFNHEVVKKALVMAMEK-------QNEASILALLQECSGEGLITINQMTNGFA 479
           ++DLG+PF   +V  + ++ AM++       +N   ++ L +  +G+G++   Q+     
Sbjct: 294 LKDLGIPFVRAKVGDRYVLEAMQEKGWRIGAENSGHVILLDKTTTGDGIVAGLQVLTAMV 353

Query: 478 RVKEGLDDL 452
           R    L DL
Sbjct: 354 RNHMSLHDL 362


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 109,001,794
Number of Sequences: 219361
Number of extensions: 2324032
Number of successful extensions: 6917
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 6642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6913
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7309604013
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)