ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbasd27a17 |
|---|---|
| Clone Library Name | barley_pub |
>SSM1_YEAST (P53078) Protein SSM1| Length = 280 Score = 40.8 bits (94), Expect = 0.004 Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 1/114 (0%) Frame = -2 Query: 671 VFTNGDRLHASRAMKRLGIDDCFEGVLCFETLNPASPTPVLSDKVEIFDIMKHLAHPEPG 492 +FTN + HA R ++ LGI D F+G+ T S T L Sbjct: 163 LFTNAYKNHAIRCLRLLGIADLFDGL----TYCDYSRTDTL------------------- 199 Query: 491 VELPRSPILCKPNIDAMLHALKLADI-NPQTTIFFDDSVRNIQAGKQIGMHTVL 333 +CKP++ A A+K + + + F DDS +NI+ G ++GM T + Sbjct: 200 --------VCKPHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCI 245
>YIHX_SHIFL (P0A8Y4) Phosphatase yihX (EC 3.1.3.-)| Length = 199 Score = 38.9 bits (89), Expect = 0.017 Identities = 16/44 (36%), Positives = 25/44 (56%) Frame = -2 Query: 461 KPNIDAMLHALKLADINPQTTIFFDDSVRNIQAGKQIGMHTVLV 330 KP H L+ +P T+FFDD+ NI+ Q+G+ ++LV Sbjct: 141 KPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILV 184
>YIHX_ECOLI (P0A8Y3) Phosphatase yihX (EC 3.1.3.-)| Length = 199 Score = 38.9 bits (89), Expect = 0.017 Identities = 16/44 (36%), Positives = 25/44 (56%) Frame = -2 Query: 461 KPNIDAMLHALKLADINPQTTIFFDDSVRNIQAGKQIGMHTVLV 330 KP H L+ +P T+FFDD+ NI+ Q+G+ ++LV Sbjct: 141 KPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILV 184
>YIEH_ECOLI (P31467) Phosphatase yieH (EC 3.1.3.-)| Length = 221 Score = 38.5 bits (88), Expect = 0.022 Identities = 22/71 (30%), Positives = 28/71 (39%) Frame = -2 Query: 461 KPNIDAMLHALKLADINPQTTIFFDDSVRNIQAGKQIGMHTVLVGTSERIKGADHALESL 282 KP+ M HA K ++N + I DDSV Q+G GM K H + Sbjct: 142 KPDPALMFHAAKAMNVNVENCILVDDSVAGAQSGIDAGMEVFYFCADPHNKPIVHPKVTT 201 Query: 281 HNMKEAFPELW 249 PELW Sbjct: 202 FTHLSQLPELW 212
>YAI5_SCHPO (Q09893) Hypothetical protein C24B11.05 in chromosome I| Length = 226 Score = 37.7 bits (86), Expect = 0.037 Identities = 14/26 (53%), Positives = 21/26 (80%) Frame = -2 Query: 671 VFTNGDRLHASRAMKRLGIDDCFEGV 594 +FTN +HA+R +K LGI+DCF+G+ Sbjct: 110 IFTNAYIVHANRVLKYLGIEDCFDGI 135
>YHCW_BACSU (P54607) Hypothetical protein yhcW| Length = 220 Score = 37.0 bits (84), Expect = 0.064 Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 6/72 (8%) Frame = -2 Query: 461 KPNIDAMLHALKLADINPQTTIFFDDSVRNIQAGKQIGMHTVLVGTSERIKGA------D 300 KPN + L A K ++P + F+DSV A K+ GM V+V ++ G D Sbjct: 141 KPNPELYLLAAKNLGVSPAECLAFEDSVNGSIAAKRAGMKCVIV--PNKVTGTLMFEDYD 198 Query: 299 HALESLHNMKEA 264 H LES+ M+ A Sbjct: 199 HRLESMAEMELA 210
>GPH_ECOLI (P32662) Phosphoglycolate phosphatase (EC 3.1.3.18) (PGPase) (PGP)| Length = 252 Score = 36.6 bits (83), Expect = 0.083 Identities = 24/76 (31%), Positives = 37/76 (48%) Frame = -2 Query: 563 PTPVLSDKVEIFDIMKHLAHPEPGVELPRSPILCKPNIDAMLHALKLADINPQTTIFFDD 384 PTP ++ +E DI K+ + G ++ KP+ D +L + I PQ +F D Sbjct: 137 PTPFVAPLLEALDIAKYFSVVIGGDDVQNK----KPHPDPLLLVAERMGIAPQQMLFVGD 192 Query: 383 SVRNIQAGKQIGMHTV 336 S +IQA K G +V Sbjct: 193 SRNDIQAAKAAGCPSV 208
>GPH_ECO57 (P58422) Phosphoglycolate phosphatase (EC 3.1.3.18) (PGPase) (PGP)| Length = 252 Score = 36.6 bits (83), Expect = 0.083 Identities = 24/76 (31%), Positives = 37/76 (48%) Frame = -2 Query: 563 PTPVLSDKVEIFDIMKHLAHPEPGVELPRSPILCKPNIDAMLHALKLADINPQTTIFFDD 384 PTP ++ +E DI K+ + G ++ KP+ D +L + I PQ +F D Sbjct: 137 PTPFVAPLLEALDIAKYFSVVIGGDDVQNK----KPHPDPLLLVAERMGIAPQQMLFVGD 192 Query: 383 SVRNIQAGKQIGMHTV 336 S +IQA K G +V Sbjct: 193 SRNDIQAAKAAGCPSV 208
>GMHB_PASMU (Q9CK98) D,D-heptose 1,7-bisphosphate phosphatase (EC 3.1.3.-)| (D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase) Length = 184 Score = 35.4 bits (80), Expect = 0.19 Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 6/69 (8%) Frame = -2 Query: 461 KPNIDAMLHALKLADINPQTTIFFDDSVRNIQAGKQIGM-HTVLVGTSERI-----KGAD 300 KP +L A+K +I+P T+ D V ++ AGK + +TVLV T + I K A+ Sbjct: 107 KPKPGMLLQAIKELNIDPNTSFMVGDKVEDMLAGKGAKIKNTVLVKTGKPITEDGKKQAN 166 Query: 299 HALESLHNM 273 + LES+ ++ Sbjct: 167 YVLESIADL 175
>Y3433_MYCBO (P65070) Hypothetical protein Mb3433| Length = 262 Score = 34.7 bits (78), Expect = 0.32 Identities = 21/67 (31%), Positives = 32/67 (47%) Frame = -2 Query: 494 GVELPRSPILCKPNIDAMLHALKLADINPQTTIFFDDSVRNIQAGKQIGMHTVLVGTSER 315 GV L I KP D+ L A +L + P F+D++ + AG+ G V+VG + Sbjct: 179 GVTLREEHIAGKPAPDSFLRAAELLGVTPDAAAVFEDALSGVAAGR-AGNFAVVVGINRT 237 Query: 314 IKGADHA 294 + A A Sbjct: 238 GRAAQAA 244
>Y3400_MYCTU (P65069) Hypothetical protein Rv3400/MT3508| Length = 262 Score = 34.7 bits (78), Expect = 0.32 Identities = 21/67 (31%), Positives = 32/67 (47%) Frame = -2 Query: 494 GVELPRSPILCKPNIDAMLHALKLADINPQTTIFFDDSVRNIQAGKQIGMHTVLVGTSER 315 GV L I KP D+ L A +L + P F+D++ + AG+ G V+VG + Sbjct: 179 GVTLREEHIAGKPAPDSFLRAAELLGVTPDAAAVFEDALSGVAAGR-AGNFAVVVGINRT 237 Query: 314 IKGADHA 294 + A A Sbjct: 238 GRAAQAA 244
>P1254_THEMA (Q9X0Y1) Phosphorylated carbohydrates phosphatase TM1254 (EC| 3.1.3.-) Length = 216 Score = 34.3 bits (77), Expect = 0.41 Identities = 25/85 (29%), Positives = 40/85 (47%) Frame = -2 Query: 461 KPNIDAMLHALKLADINPQTTIFFDDSVRNIQAGKQIGMHTVLVGTSERIKGADHALESL 282 KP+ + L L+ ++ P+ + F+DS ++A K G+ ERI G H+L Sbjct: 140 KPDPEIYLLVLERLNVVPEKVVVFEDSKSGVEAAKSAGI--------ERIYGVVHSLNDG 191 Query: 281 HNMKEAFPELWVEAVKDEDVRNSSK 207 + EA V VK E++ N K Sbjct: 192 KALLEAGA---VALVKPEEILNVLK 213
>Y393_MYCLE (Q49741) Hypothetical protein ML0393| Length = 261 Score = 33.9 bits (76), Expect = 0.54 Identities = 17/62 (27%), Positives = 30/62 (48%) Frame = -2 Query: 545 DKVEIFDIMKHLAHPEPGVELPRSPILCKPNIDAMLHALKLADINPQTTIFFDDSVRNIQ 366 D ++I + + + G+ L I KP D+ L +L D+ P F+D++ +Q Sbjct: 161 DVLKITGLDRFVQQQVDGITLREEHIAGKPAPDSYLRGAQLLDVAPDAAAVFEDALSGVQ 220 Query: 365 AG 360 AG Sbjct: 221 AG 222
>Y488_HAEIN (P44004) Hypothetical protein HI0488| Length = 200 Score = 33.1 bits (74), Expect = 0.92 Identities = 18/50 (36%), Positives = 24/50 (48%) Frame = -2 Query: 461 KPNIDAMLHALKLADINPQTTIFFDDSVRNIQAGKQIGMHTVLVGTSERI 312 KP+ + L +L NP I F+D+ +QAG GM V T E I Sbjct: 148 KPHPETFLRCAELIQANPSRCIVFEDADLGVQAGLSAGMDVFDVRTREII 197
>GPH_SALTI (Q8Z202) Phosphoglycolate phosphatase (EC 3.1.3.18) (PGPase) (PGP)| Length = 252 Score = 32.7 bits (73), Expect = 1.2 Identities = 21/76 (27%), Positives = 36/76 (47%) Frame = -2 Query: 563 PTPVLSDKVEIFDIMKHLAHPEPGVELPRSPILCKPNIDAMLHALKLADINPQTTIFFDD 384 PTP ++ +E DI K+ + G ++ KP+ + +L + P+ +F D Sbjct: 137 PTPFVAPLLESLDIAKYFSVVIGGDDVQNK----KPHPEPLLLVASRLGMTPEQMLFVGD 192 Query: 383 SVRNIQAGKQIGMHTV 336 S +IQA K G +V Sbjct: 193 SRNDIQAAKAAGCPSV 208
>CBBY_RHOSH (P95649) Protein cbbY| Length = 230 Score = 32.7 bits (73), Expect = 1.2 Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 4/63 (6%) Frame = -2 Query: 461 KPNIDAMLHALKLADINPQTTIFFDDSVRNIQAGKQIGMHTVL----VGTSERIKGADHA 294 KP+ D AL+ D+ P+ + +DS+ ++A K G+ ++ E GAD Sbjct: 151 KPSPDIYRLALRELDVPPERAVALEDSLNGLRAAKGAGLRCIVSPGFYTRHEEFAGADRL 210 Query: 293 LES 285 L+S Sbjct: 211 LDS 213
>GPH2_PSEAE (Q9HZ62) Phosphoglycolate phosphatase 2 (EC 3.1.3.18) (PGPase2)| (PGP 2) Length = 226 Score = 32.3 bits (72), Expect = 1.6 Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 2/67 (2%) Frame = -2 Query: 524 IMKHLAHPEPGVEL--PRSPILCKPNIDAMLHALKLADINPQTTIFFDDSVRNIQAGKQI 351 IM+ L + E L P KP+ + +L A I+P +F D +R+I++G+ Sbjct: 123 IMQRLGYAERSRVLVCPDHVTRSKPDPEPLLLACSQLGIDPSRVLFIGDDLRDIESGRDA 182 Query: 350 GMHTVLV 330 G T V Sbjct: 183 GTKTAAV 189
>GPH_SALTY (Q8ZLK5) Phosphoglycolate phosphatase (EC 3.1.3.18) (PGPase) (PGP)| Length = 252 Score = 32.0 bits (71), Expect = 2.1 Identities = 21/76 (27%), Positives = 36/76 (47%) Frame = -2 Query: 563 PTPVLSDKVEIFDIMKHLAHPEPGVELPRSPILCKPNIDAMLHALKLADINPQTTIFFDD 384 PTP ++ +E DI K+ + G ++ KP+ + +L + P+ +F D Sbjct: 137 PTPFVAPLLESLDIAKYFSVVIGGDDVQNK----KPHPEPLLLVASRLGMMPEQMLFVGD 192 Query: 383 SVRNIQAGKQIGMHTV 336 S +IQA K G +V Sbjct: 193 SRNDIQAAKAAGCPSV 208
>YNIC_ECOLI (P77247) Phosphatase yniC (EC 3.1.3.-)| Length = 222 Score = 32.0 bits (71), Expect = 2.1 Identities = 29/104 (27%), Positives = 43/104 (41%), Gaps = 5/104 (4%) Frame = -2 Query: 578 LNPASPTPVLSDKVEIFDIMKHLAHPEPGVELPRSPILCKPNIDAMLHALKLADINPQTT 399 L ASP +L + +FD+ +LP S KP+ L ++P T Sbjct: 113 LASASPLHMLEKVLTMFDLRDSFDALASAEKLPYS----KPHPQVYLDCAAKLGVDPLTC 168 Query: 398 IFFDDSVRNIQAGKQIGMHTVLVGTSE-----RIKGADHALESL 282 + +DSV + A K M +++V E R AD L SL Sbjct: 169 VALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLADVKLSSL 212
>GPH_PSEPU (P42509) Probable phosphoglycolate phosphatase (EC 3.1.3.18)| (PGPase) (PGP) (Fragment) Length = 251 Score = 32.0 bits (71), Expect = 2.1 Identities = 14/42 (33%), Positives = 25/42 (59%) Frame = -2 Query: 461 KPNIDAMLHALKLADINPQTTIFFDDSVRNIQAGKQIGMHTV 336 KP+ A+L +++A + PQ ++F DS ++ A K G+ V Sbjct: 136 KPDPAALLFVMQMAGVTPQQSLFVGDSRSDVLAAKAAGVQCV 177
>GMHB_ANETH (Q9AGY5) D,D-heptose 1,7-bisphosphate phosphatase (EC 3.1.3.-)| (D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase) Length = 179 Score = 32.0 bits (71), Expect = 2.1 Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 1/65 (1%) Frame = -2 Query: 506 HPEPGV-ELPRSPILCKPNIDAMLHALKLADINPQTTIFFDDSVRNIQAGKQIGMHTVLV 330 HPE G+ + R KPN +L + K +I+ +I D +IQAGK+ G++ ++ Sbjct: 93 HPEHGIGKYKRDSFDRKPNPGMILKSQKEFNIDLSKSILVGDKESDIQAGKRAGVNVNII 152 Query: 329 GTSER 315 ++ + Sbjct: 153 FSNNK 157
>GMHB_HAEIN (P46452) D,D-heptose 1,7-bisphosphate phosphatase (EC 3.1.3.-)| (D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase) Length = 184 Score = 31.6 bits (70), Expect = 2.7 Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 7/77 (9%) Frame = -2 Query: 461 KPNIDAMLHALKLADINPQTTIFFDDSVRNIQA--GKQIGMHTVLVGTSERIKG-----A 303 KP +L A+K I+P +I D V +++A G ++ M+ VLV T + + G A Sbjct: 107 KPKSGMLLQAIKELKIDPTQSIMVGDKVEDLKAGIGAKVKMN-VLVRTGKPVTGEGEGIA 165 Query: 302 DHALESLHNMKEAFPEL 252 D+ L+S+ ++ L Sbjct: 166 DYVLDSIVDLPRILKRL 182
>YNIC_ECO57 (Q7ADF8) Phosphatase yniC (EC 3.1.3.-)| Length = 222 Score = 31.6 bits (70), Expect = 2.7 Identities = 23/87 (26%), Positives = 37/87 (42%) Frame = -2 Query: 578 LNPASPTPVLSDKVEIFDIMKHLAHPEPGVELPRSPILCKPNIDAMLHALKLADINPQTT 399 L ASP +L + +FD+ +LP S KP+ L ++P T Sbjct: 113 LASASPLHMLEKVLTMFDLRDSFDALASAEKLPYS----KPHPQVYLDCAAKLGVDPLTC 168 Query: 398 IFFDDSVRNIQAGKQIGMHTVLVGTSE 318 + +DSV + A K M +++V E Sbjct: 169 VALEDSVNGMIASKAARMRSIVVPAPE 195
>SUHW4_MOUSE (Q68FE8) Suppressor of hairy wing homolog 4| Length = 974 Score = 31.6 bits (70), Expect = 2.7 Identities = 20/59 (33%), Positives = 31/59 (52%) Frame = +1 Query: 535 STLSDSTGVGDAGFNVSKHRTPSKQSSIPSLFMALEAWSLSPFVNTSLRMGRLRKDVPE 711 +T+SD + + N SK + SK S++ L + + VNT+LR RLR+ V E Sbjct: 579 TTISDPSKANETKSNGSKSKNKSKVSNMQKKQSTLSSSNKKSKVNTALRNLRLRRGVHE 637
>PPAX_LISMO (Q8Y4G3) Pyrophosphatase ppaX (EC 3.6.1.1)| Length = 217 Score = 31.2 bits (69), Expect = 3.5 Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 1/80 (1%) Frame = -2 Query: 461 KPNIDAMLHALKLADINPQTTIFFDDSVRNIQAGKQIGMHTVLVGTSERIKGADHALESL 282 KP+ + + AL L + + I D+ +I+AGK T+ G + IKG +H + Sbjct: 141 KPDPEGIEMALSLLNATKEEAIMIGDNYHDIEAGK--NAETLTAGVAWAIKGPEHLAQFQ 198 Query: 281 HN-MKEAFPELWVEAVKDED 225 + M E +L + V+DE+ Sbjct: 199 PDFMLEKMSDL-LAIVRDEE 217
>PPAX_LISMF (Q71WU6) Pyrophosphatase ppaX (EC 3.6.1.1)| Length = 217 Score = 31.2 bits (69), Expect = 3.5 Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 1/80 (1%) Frame = -2 Query: 461 KPNIDAMLHALKLADINPQTTIFFDDSVRNIQAGKQIGMHTVLVGTSERIKGADHALESL 282 KP+ + + AL L + + I D+ +I+AGK T+ G + IKG +H + Sbjct: 141 KPDPEGIEMALSLLNATKEEAIMIGDNYHDIEAGK--NAETLTAGVAWAIKGPEHLAQFQ 198 Query: 281 HN-MKEAFPELWVEAVKDED 225 + M E +L + V+DE+ Sbjct: 199 PDFMLEKMSDL-LAIVRDEE 217
>PPAX_LISIN (Q928B2) Pyrophosphatase ppaX (EC 3.6.1.1)| Length = 217 Score = 31.2 bits (69), Expect = 3.5 Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 1/80 (1%) Frame = -2 Query: 461 KPNIDAMLHALKLADINPQTTIFFDDSVRNIQAGKQIGMHTVLVGTSERIKGADHALESL 282 KP+ + + AL L + + I D+ +I+AGK T+ G + IKG +H + Sbjct: 141 KPDPEGIEMALSLLNATKEEAIMIGDNYHDIEAGK--NAETLTAGVAWAIKGPEHLAQFQ 198 Query: 281 HN-MKEAFPELWVEAVKDED 225 + M E +L + V+DE+ Sbjct: 199 PDFMLEKMSDL-LAIVRDEE 217
>EKI1_YEAST (Q03764) Ethanolamine kinase (EC 2.7.1.82) (EK)| Length = 534 Score = 31.2 bits (69), Expect = 3.5 Identities = 19/56 (33%), Positives = 24/56 (42%) Frame = -2 Query: 677 KLVFTNGDRLHASRAMKRLGIDDCFEGVLCFETLNPASPTPVLSDKVEIFDIMKHL 510 K+VF + D H + K G DD G L A P PV +FD+ HL Sbjct: 322 KMVFCHNDLQHGNLLFKSKGKDDISVGDLTIIDFEYAGPNPV------VFDLSNHL 371
>MAST1_RAT (Q810W7) Microtubule-associated serine/threonine-protein kinase 1| (EC 2.7.11.1) (Syntrophin-associated serine/threonine-protein kinase) Length = 1570 Score = 25.4 bits (54), Expect(2) = 4.2 Identities = 12/39 (30%), Positives = 17/39 (43%) Frame = +3 Query: 585 KAQNPLEAVIDSEPLHGPRSMEPVTVREHEFADG*AEEG 701 + +PL + S PL PR+ P T FA +G Sbjct: 48 RPHSPLPGHLGSSPLDSPRNFSPNTPAHFSFASSRRADG 86 Score = 23.9 bits (50), Expect(2) = 4.2 Identities = 9/30 (30%), Positives = 19/30 (63%) Frame = +2 Query: 509 PGASLYRRSQLCQTAQEWAMPGSMSQSTEP 598 PG S++RR++ C+T+ ++ + + T P Sbjct: 18 PGGSMFRRTKSCRTSNRKSLILTSTSPTLP 47
>MAST1_HUMAN (Q9Y2H9) Microtubule-associated serine/threonine-protein kinase 1| (EC 2.7.11.1) (Syntrophin-associated serine/threonine-protein kinase) Length = 1570 Score = 25.4 bits (54), Expect(2) = 4.2 Identities = 12/39 (30%), Positives = 17/39 (43%) Frame = +3 Query: 585 KAQNPLEAVIDSEPLHGPRSMEPVTVREHEFADG*AEEG 701 + +PL + S PL PR+ P T FA +G Sbjct: 48 RPHSPLPGHLGSSPLDSPRNFSPNTPAHFSFASSRRADG 86 Score = 23.9 bits (50), Expect(2) = 4.2 Identities = 9/30 (30%), Positives = 19/30 (63%) Frame = +2 Query: 509 PGASLYRRSQLCQTAQEWAMPGSMSQSTEP 598 PG S++RR++ C+T+ ++ + + T P Sbjct: 18 PGGSMFRRTKSCRTSNRKSLILTSTSPTLP 47
>MAST1_MOUSE (Q9R1L5) Microtubule-associated serine/threonine-protein kinase 1| (EC 2.7.11.1) (Syntrophin-associated serine/threonine-protein kinase) Length = 1566 Score = 25.4 bits (54), Expect(2) = 4.2 Identities = 12/39 (30%), Positives = 17/39 (43%) Frame = +3 Query: 585 KAQNPLEAVIDSEPLHGPRSMEPVTVREHEFADG*AEEG 701 + +PL + S PL PR+ P T FA +G Sbjct: 48 RPHSPLPGHLGSSPLDSPRNFSPNTPAHFSFASSRRADG 86 Score = 23.9 bits (50), Expect(2) = 4.2 Identities = 9/30 (30%), Positives = 19/30 (63%) Frame = +2 Query: 509 PGASLYRRSQLCQTAQEWAMPGSMSQSTEP 598 PG S++RR++ C+T+ ++ + + T P Sbjct: 18 PGGSMFRRTKSCRTSNRKSLILTSTSPTLP 47
>YFBT_ECOLI (P77625) Phosphatase yfbT (EC 3.1.3.-)| Length = 216 Score = 30.8 bits (68), Expect = 4.6 Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 3/66 (4%) Frame = -2 Query: 461 KPNIDAMLHALKLADINPQTTIFFDDSVRNIQAGKQIGMHTVLVGT---SERIKGADHAL 291 KP DA L +L + PQ + +D+ + +G G H + V + R+ D L Sbjct: 138 KPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLNEVDLVL 197 Query: 290 ESLHNM 273 SL + Sbjct: 198 HSLEQI 203
>RS3_ZYMMO (Q5NQ59) 30S ribosomal protein S3| Length = 231 Score = 30.8 bits (68), Expect = 4.6 Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 2/102 (1%) Frame = -2 Query: 593 LCFETLNPASPTPVLSDK-VEIFDIMKHL-AHPEPGVELPRSPILCKPNIDAMLHALKLA 420 LC ++ A P ++ K +I + K L + E GV L I KP IDA L A +A Sbjct: 63 LCRISIYAARPGVIIGKKGADIEKLRKKLDSMTESGVSLNIVEIR-KPEIDAQLVAQGIA 121 Query: 419 DINPQTTIFFDDSVRNIQAGKQIGMHTVLVGTSERIKGADHA 294 D + F R +Q+ ++G V + R+ GA+ A Sbjct: 122 DQLERRVAFRRAMKRAVQSALRLGAQGVRITCGGRLGGAEIA 163
>RS3_PSEPK (Q88QM9) 30S ribosomal protein S3| Length = 228 Score = 30.8 bits (68), Expect = 4.6 Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 1/97 (1%) Frame = -2 Query: 581 TLNPASPTPVLSDKVEIFDIMKHLAHPEPGVELPRS-PILCKPNIDAMLHALKLADINPQ 405 T++ A P V+ K E + ++ + GV + + + KP +DAML A +A + Sbjct: 67 TIHTARPGIVIGKKGEDVEKLRQDLTKQMGVPVHINIEEIRKPELDAMLVAQSVAQQLER 126 Query: 404 TTIFFDDSVRNIQAGKQIGMHTVLVGTSERIKGADHA 294 +F R +Q +IG + + S R+ GA+ A Sbjct: 127 RVMFRRAMKRAVQNAMRIGAKGIKIQVSGRLGGAEIA 163
>RS3_PSEAE (Q9HWE1) 30S ribosomal protein S3| Length = 228 Score = 30.8 bits (68), Expect = 4.6 Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 1/97 (1%) Frame = -2 Query: 581 TLNPASPTPVLSDKVEIFDIMKHLAHPEPGVELPRS-PILCKPNIDAMLHALKLADINPQ 405 T++ A P V+ K E + ++ + GV + + + KP +DAML A +A + Sbjct: 67 TIHTARPGIVIGKKGEDVEKLRQDLTKQMGVPVHINIEEIRKPELDAMLVAQSVAQQLER 126 Query: 404 TTIFFDDSVRNIQAGKQIGMHTVLVGTSERIKGADHA 294 +F R +Q +IG + + S R+ GA+ A Sbjct: 127 RVMFRRAMKRAVQNAMRIGAKGIKIQVSGRLGGAEIA 163
>GPH_KLEAE (Q9EYY5) Phosphoglycolate phosphatase (EC 3.1.3.18) (PGPase) (PGP)| Length = 253 Score = 30.4 bits (67), Expect = 6.0 Identities = 20/76 (26%), Positives = 35/76 (46%) Frame = -2 Query: 563 PTPVLSDKVEIFDIMKHLAHPEPGVELPRSPILCKPNIDAMLHALKLADINPQTTIFFDD 384 PTP ++ ++ DI K+ G ++ KP+ + +L + + P +F D Sbjct: 138 PTPFVAPLLDALDIAKYFTVVIGGDDVQNK----KPHPEPLLLVAEKLSLAPAELLFVGD 193 Query: 383 SVRNIQAGKQIGMHTV 336 S +IQA K G +V Sbjct: 194 SRNDIQAAKAAGCCSV 209
>RS3_BRAJA (Q89J90) 30S ribosomal protein S3| Length = 241 Score = 30.0 bits (66), Expect = 7.8 Identities = 25/100 (25%), Positives = 44/100 (44%), Gaps = 1/100 (1%) Frame = -2 Query: 590 CFETLNPASPTPVLSDK-VEIFDIMKHLAHPEPGVELPRSPILCKPNIDAMLHALKLADI 414 C T++ A P V+ K +I + K +A + + KP +DA L A +A Sbjct: 64 CRVTIHSARPGVVIGKKGADIDKLRKRVADITSSDVVINIVEIRKPELDATLVAESIAQQ 123 Query: 413 NPQTTIFFDDSVRNIQAGKQIGMHTVLVGTSERIKGADHA 294 + F R +Q+ ++G + + S R+ GA+ A Sbjct: 124 LERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIA 163
>GTF1_STRDO (P11001) Glucosyltransferase-I precursor (EC 2.4.1.5) (GTF-I)| (Dextransucrase) (Sucrose 6-glucosyltransferase) Length = 1597 Score = 30.0 bits (66), Expect = 7.8 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Frame = -3 Query: 388 MTASGTYRPGSRLECTLSWLEPLK-GLKALTMPWRAFTT*RRRFLNY 251 +TA YRP S L+ +W E K + L M W T +R ++NY Sbjct: 240 LTADSWYRPKSILKDGKTWTESSKDDFRPLLMAWWPDTETKRNYVNY 286
>YEM7_YEAST (P40025) Hypothetical 37.7 kDa protein in PIP1-GLN3 intergenic| region Length = 321 Score = 30.0 bits (66), Expect = 7.8 Identities = 13/26 (50%), Positives = 18/26 (69%) Frame = -2 Query: 671 VFTNGDRLHASRAMKRLGIDDCFEGV 594 +FTN + HA R +K LGI D F+G+ Sbjct: 163 LFTNSYKNHAIRCVKILGIADLFDGI 188
>GPH_NEIMA (Q9JTP5) Phosphoglycolate phosphatase (EC 3.1.3.18) (PGPase) (PGP)| Length = 235 Score = 30.0 bits (66), Expect = 7.8 Identities = 16/47 (34%), Positives = 27/47 (57%) Frame = -2 Query: 692 SLPIRKLVFTNGDRLHASRAMKRLGIDDCFEGVLCFETLNPASPTPV 552 SL I V TN + + A+ +K+LG+ D F +L ++L P+P+ Sbjct: 110 SLGIPLAVITNKNEILAAELLKQLGLADYFSLILGGDSLPEKKPSPL 156
>RS3_NITWN (Q3SSW0) 30S ribosomal protein S3| Length = 231 Score = 30.0 bits (66), Expect = 7.8 Identities = 25/100 (25%), Positives = 44/100 (44%), Gaps = 1/100 (1%) Frame = -2 Query: 590 CFETLNPASPTPVLSDK-VEIFDIMKHLAHPEPGVELPRSPILCKPNIDAMLHALKLADI 414 C T++ A P V+ K +I + K +A + + KP +DA L A +A Sbjct: 64 CRVTIHSARPGVVIGKKGADIDKLRKRVADITSSDVVLNIVEIRKPELDATLVAESIAQQ 123 Query: 413 NPQTTIFFDDSVRNIQAGKQIGMHTVLVGTSERIKGADHA 294 + F R +Q+ ++G + + S R+ GA+ A Sbjct: 124 LERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIA 163
>RS3_CHRVO (Q7NQF8) 30S ribosomal protein S3| Length = 233 Score = 30.0 bits (66), Expect = 7.8 Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 1/97 (1%) Frame = -2 Query: 581 TLNPASPTPVLSDKVEIFDIMKHLAHPEPGVELPRS-PILCKPNIDAMLHALKLADINPQ 405 T++ A P V+ K E +++K GV + + + KP +DA + A +A + Sbjct: 67 TIHSARPGVVIGKKGEDIEVLKQELQKRLGVPVHVNIEEVRKPELDAQIIADGIASQLEK 126 Query: 404 TTIFFDDSVRNIQAGKQIGMHTVLVGTSERIKGADHA 294 +F R +Q ++G + + +S R+ G D A Sbjct: 127 RVMFRRAMKRAMQNAMRLGAEGIKIMSSGRLNGIDIA 163
>MMAC_HUMAN (Q9Y4U1) Methylmalonic aciduria and homocystinuria type C protein| Length = 282 Score = 30.0 bits (66), Expect = 7.8 Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Frame = -2 Query: 284 LHNMKEAFPELWVEAVKDEDVRNSSKVGIETSVIA*NPHEVHM-GQAYHYQKQSMHA 117 L ++E+ PEL +E + D +V + + I A H+ G AY+YQ+Q + A Sbjct: 87 LGRVRESLPELQIEIIADYEVHPNRRPKILAQTAA------HVAGAAYYYQRQDVEA 137 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 111,334,939 Number of Sequences: 219361 Number of extensions: 2388975 Number of successful extensions: 7015 Number of sequences better than 10.0: 43 Number of HSP's better than 10.0 without gapping: 6759 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7011 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7706249192 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
