Clone Name | rbasd26l14 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | ref|NM_183504.1| Oryza sativa (japonica cultivar-group), mRNA | 44 | 0.19 | 2 | dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... | 42 | 0.74 | 3 | dbj|AP002845.3| Oryza sativa (japonica cultivar-group) genomic D... | 42 | 0.74 |
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>ref|NM_183504.1| Oryza sativa (japonica cultivar-group), mRNA Length = 696 Score = 44.1 bits (22), Expect = 0.19 Identities = 26/28 (92%) Strand = Plus / Minus Query: 53 tctatgccaattctngagctanaggccc 80 |||||||||||||| |||||| |||||| Sbjct: 656 tctatgccaattcttgagctaaaggccc 629
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 0.74 Identities = 25/27 (92%) Strand = Plus / Minus Query: 53 tctatgccaattctngagctanaggcc 79 |||||||||||||| |||||| ||||| Sbjct: 456303 tctatgccaattcttgagctaaaggcc 456277
>dbj|AP002845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0482C06 Length = 182779 Score = 42.1 bits (21), Expect = 0.74 Identities = 25/27 (92%) Strand = Plus / Minus Query: 53 tctatgccaattctngagctanaggcc 79 |||||||||||||| |||||| ||||| Sbjct: 96504 tctatgccaattcttgagctaaaggcc 96478 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 276,074 Number of Sequences: 3902068 Number of extensions: 276074 Number of successful extensions: 4007 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 4002 Number of HSP's gapped (non-prelim): 5 length of query: 229 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 207 effective length of database: 17,147,199,772 effective search space: 3549470352804 effective search space used: 3549470352804 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)