ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd26l09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK066648.1| Oryza sativa (japonica cultivar-group) cDNA clon... 147 3e-32
2gb|AF016896.1|AF016896 Oryza sativa GDP dissociation inhibitor p... 139 8e-30
3gb|AF016897.1|AF016897 Oryza sativa GDP dissociation inhibitor p... 109 7e-21
4dbj|AK073143.1| Oryza sativa (japonica cultivar-group) cDNA clon... 109 7e-21
5gb|BT017180.1| Zea mays clone EL01N0369D01.c mRNA sequence 86 1e-13
6gb|AY103870.1| Zea mays PCO065776 mRNA sequence 86 1e-13
7gb|AC137623.3| Oryza sativa (japonica cultivar-group) chromosome... 80 7e-12
8gb|AC134933.2| Oryza sativa (japonica cultivar-group) chromosome... 80 7e-12
9dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 80 7e-12
10gb|AC136525.2| Oryza sativa (japonica cultivar-group) chromosome... 64 4e-07
11gb|AC145476.2| Oryza sativa (japonica cultivar-group) chromosome... 64 4e-07
12gb|AC153000.5| Medicago truncatula clone mth2-94c2, complete seq... 48 0.024
13emb|BX276106.6| Zebrafish DNA sequence from clone DKEY-1N18 in l... 46 0.093
14emb|AJ005836.1|CAR5836 Cicer arietinum mRNA for GDP dissociation... 44 0.37
15gb|U62866.1|VCU62866 Volvox carteri f. nagariensis GDP dissociat... 44 0.37
16gb|AC161886.4| Pan troglodytes BAC clone CH251-708N9 from chromo... 42 1.5
17gb|AC002541.1| Homo sapiens BAC clone CTB-43K6 from 7, complete ... 42 1.5
18emb|CR936845.11| Mouse DNA sequence from clone DN-279H6 on chrom... 42 1.5
19emb|AL356415.26| Human DNA sequence from clone RP3-337D23 on chr... 42 1.5
20emb|AL596136.5| Mouse DNA sequence from clone RP23-83I13 on chro... 42 1.5
21ref|NM_205004.1| Gallus gallus GDP dissociation inhibitor 2 (GDI... 42 1.5
22dbj|AK122841.1| Homo sapiens cDNA FLJ16452 fis, clone BRAWH30024... 42 1.5
23dbj|AK137828.1| Mus musculus 16 days neonate thymus cDNA, RIKEN ... 42 1.5
24ref|XM_693284.1| PREDICTED: Danio rerio similar to Rgma (LOC5698... 42 1.5
25ref|XM_702739.1| PREDICTED: Danio rerio similar to Rgma, transcr... 42 1.5
26gb|AC146074.4| Pan troglodytes BAC clone RP43-15D8 from chromoso... 42 1.5
27dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete ge... 42 1.5
28gb|BC091800.1| Danio rerio RGM domain family, member A, mRNA (cD... 42 1.5
29gb|AC171018.2| Gallus gallus BAC clone CH261-11F14 from chromoso... 42 1.5
30emb|BX649578.14| Zebrafish DNA sequence from clone CH211-196L7 i... 42 1.5
31gb|AF144713.1|AF144713 Homo sapiens Rab GDP dissociation inhibit... 42 1.5
32emb|Y13297.1|HSY13297 Homo sapiens gene encoding GDP dissociatio... 42 1.5
33gb|AF076291.1|AF076291 Gallus gallus Rab-GDP dissociation inhibi... 42 1.5
34gb|BC094316.1| Mus musculus ankyrin repeat domain 41, mRNA (cDNA... 40 5.8
35gb|AC157574.6| Mus musculus BAC clone RP23-1G17 from chromosome ... 40 5.8
36gb|AC127416.7| Mus musculus BAC clone RP23-457J22 from chromosom... 40 5.8
37gb|AC113107.15| Mus musculus chromosome 10, clone RP23-325G13, c... 40 5.8
38emb|CT005241.3| Pan troglodytes chromosome X clone PTB-093L20 ma... 40 5.8
39gb|AC108830.13| Mus musculus chromosome 8, clone RP23-232G11, co... 40 5.8
40gb|AF548034.1| Trametes sp. I-62 laccase (pox2) mRNA, complete cds 40 5.8
41gb|AC160547.6| Mus musculus chromosome 8, clone RP23-240F23, com... 40 5.8
42emb|Z93023.1|HS958B3 Human DNA sequence from clone RP5-958B3 on ... 40 5.8
43emb|AL590075.8| Human DNA sequence from clone RP11-462L13 on chr... 40 5.8
44emb|AJ618983.1| Medicago truncatula gdi gene for GDP dissociatio... 40 5.8
45gb|BC030436.1| Mus musculus ankyrin repeat domain 41, mRNA (cDNA... 40 5.8
46gb|AC105230.10| Homo sapiens chromosome 8, clone RP11-699F21, co... 40 5.8
47ref|XM_688593.1| PREDICTED: Danio rerio similar to Orphan sodium... 40 5.8
48ref|XM_682738.1| PREDICTED: Danio rerio similar to Orphan sodium... 40 5.8
49ref|XM_703814.1| PREDICTED: Danio rerio similar to Orphan sodium... 40 5.8
50dbj|AK080768.1| Mus musculus adult retina cDNA, RIKEN full-lengt... 40 5.8
51dbj|AK087444.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN f... 40 5.8
52dbj|AK083552.1| Mus musculus 9 days embryo whole body cDNA, RIKE... 40 5.8
53dbj|AK049395.1| Mus musculus 7 days embryo whole body cDNA, RIKE... 40 5.8
54dbj|AK078830.1| Mus musculus 16 days embryo lung cDNA, RIKEN ful... 40 5.8
55ref|XM_341409.2| PREDICTED: Rattus norvegicus similar to 8430438... 40 5.8
56gb|AC009430.2|AC009430 Homo sapiens, clone RP11-45O17, complete ... 40 5.8
57emb|CR318631.5| Zebrafish DNA sequence from clone DKEY-207D5 in ... 40 5.8
58emb|BX649507.3| Zebrafish DNA sequence from clone CH211-154H20 i... 40 5.8
59emb|AL928866.7| Zebrafish DNA sequence from clone DKEY-11E23 in ... 40 5.8
60emb|BX000347.7| Zebrafish DNA sequence from clone DKEY-66C4 in l... 40 5.8
61gb|AC007632.4|AC007632 Homo sapiens clone R529C19B from chromoso... 40 5.8
62ref|NM_172756.1| Mus musculus ankyrin repeat domain 41 (Ankrd41)... 40 5.8
63gb|U65400.1|PGU65400 Basidiomycete CECT 20197 phenoloxidase (pox... 40 5.8
64emb|AL808126.10| Mouse DNA sequence from clone RP23-37B4 on chro... 40 5.8
65gb|AF440524.1| Pseudomonas aeruginosa strain SG17M genomic seque... 40 5.8 
>dbj|AK066648.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013071E21, full
            insert sequence
          Length = 1762

 Score =  147 bits (74), Expect = 3e-32
 Identities = 125/142 (88%)
 Strand = Plus / Minus

                                                                        
Query: 288  tctaatactcttctgcagcgctggcagcactgagatcgacactaagatcaacagtctttc 347
            ||||||| ||||| ||||| ||||||||||| | ||||||||| ||||||||||||||||
Sbjct: 1453 tctaatattcttcagcagcactggcagcactcaaatcgacactgagatcaacagtctttc 1394

                                                                        
Query: 348  cagtaatcagtgtgtacatattaagaacatctgtcacagttgtctcaaagtgagtagtgg 407
            |||| |||||||| |||||||||||||| |||||||| ||||||||||| || || ||||
Sbjct: 1393 cagtgatcagtgtatacatattaagaacgtctgtcaccgttgtctcaaaatgtgtggtgg 1334

                                  
Query: 408  cgtcataactcgatgagacaaa 429
            | ||||| || | |||||||||
Sbjct: 1333 catcatagctagttgagacaaa 1312
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>gb|AF016896.1|AF016896 Oryza sativa GDP dissociation inhibitor protein OsGDI1 (OsGDI1) mRNA,
            complete cds
          Length = 1770

 Score =  139 bits (70), Expect = 8e-30
 Identities = 124/142 (87%)
 Strand = Plus / Minus

                                                                        
Query: 288  tctaatactcttctgcagcgctggcagcactgagatcgacactaagatcaacagtctttc 347
            ||||||| | ||| ||||| ||||||||||| | ||||||||| ||||||||||||||||
Sbjct: 1429 tctaatatttttcagcagcactggcagcactcaaatcgacactgagatcaacagtctttc 1370

                                                                        
Query: 348  cagtaatcagtgtgtacatattaagaacatctgtcacagttgtctcaaagtgagtagtgg 407
            |||| |||||||| |||||||||||||| |||||||| ||||||||||| || || ||||
Sbjct: 1369 cagtgatcagtgtatacatattaagaacgtctgtcaccgttgtctcaaaatgtgtggtgg 1310

                                  
Query: 408  cgtcataactcgatgagacaaa 429
            | ||||| || | |||||||||
Sbjct: 1309 catcatagctagttgagacaaa 1288
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>gb|AF016897.1|AF016897 Oryza sativa GDP dissociation inhibitor protein OsGDI2 (OsGDI2) mRNA,
            complete cds
          Length = 1770

 Score =  109 bits (55), Expect = 7e-21
 Identities = 121/143 (84%)
 Strand = Plus / Minus

                                                                        
Query: 287  atctaatactcttctgcagcgctggcagcactgagatcgacactaagatcaacagtcttt 346
            |||||||| ||||| || || ||||||||||| | ||| ||||| |||||||||| ||||
Sbjct: 1440 atctaatattcttcagcggcactggcagcactcaaatcaacactgagatcaacagccttt 1381

                                                                        
Query: 347  ccagtaatcagtgtgtacatattaagaacatctgtcacagttgtctcaaagtgagtagtg 406
            || || |||| ||| ||||| ||||||||||||||||| ||||||||||| || || |||
Sbjct: 1380 ccggtgatcaatgtatacatgttaagaacatctgtcaccgttgtctcaaaatgtgtggtg 1321

                                   
Query: 407  gcgtcataactcgatgagacaaa 429
            || ||||| || | |||||||||
Sbjct: 1320 gcatcatagctagttgagacaaa 1298
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>dbj|AK073143.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033023F13, full
            insert sequence
          Length = 1904

 Score =  109 bits (55), Expect = 7e-21
 Identities = 121/143 (84%)
 Strand = Plus / Minus

                                                                        
Query: 287  atctaatactcttctgcagcgctggcagcactgagatcgacactaagatcaacagtcttt 346
            |||||||| ||||| || || ||||||||||| | ||| ||||| |||||||||| ||||
Sbjct: 1432 atctaatattcttcagcggcactggcagcactcaaatcaacactgagatcaacagccttt 1373

                                                                        
Query: 347  ccagtaatcagtgtgtacatattaagaacatctgtcacagttgtctcaaagtgagtagtg 406
            || || |||| ||| ||||| ||||||||||||||||| ||||||||||| || || |||
Sbjct: 1372 ccggtgatcaatgtatacatgttaagaacatctgtcaccgttgtctcaaaatgtgtggtg 1313

                                   
Query: 407  gcgtcataactcgatgagacaaa 429
            || ||||| || | |||||||||
Sbjct: 1312 gcatcatagctagttgagacaaa 1290
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>gb|BT017180.1| Zea mays clone EL01N0369D01.c mRNA sequence
          Length = 1675

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 100/119 (84%)
 Strand = Plus / Minus

                                                                        
Query: 296  tcttctgcagcgctggcagcactgagatcgacactaagatcaacagtctttccagtaatc 355
            ||||| ||||| || |||||||| | ||| |||||||| || ||||||||||| || |||
Sbjct: 1358 tcttcggcagcactagcagcactcaaatccacactaaggtctacagtctttccggtgatc 1299

                                                                       
Query: 356  agtgtgtacatattaagaacatctgtcacagttgtctcaaagtgagtagtggcgtcata 414
            | ||| ||||| || ||||||||||| |||||||||||||| || || ||||| |||||
Sbjct: 1298 attgtatacatgttcagaacatctgttacagttgtctcaaaatgtgtggtggcatcata 1240
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>gb|AY103870.1| Zea mays PCO065776 mRNA sequence
          Length = 1840

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 100/119 (84%)
 Strand = Plus / Minus

                                                                        
Query: 296  tcttctgcagcgctggcagcactgagatcgacactaagatcaacagtctttccagtaatc 355
            ||||| ||||| || |||||||| | ||| |||||||| || ||||||||||| || |||
Sbjct: 1439 tcttcggcagcactagcagcactcaaatccacactaaggtctacagtctttccggtgatc 1380

                                                                       
Query: 356  agtgtgtacatattaagaacatctgtcacagttgtctcaaagtgagtagtggcgtcata 414
            | ||| ||||| || ||||||||||| |||||||||||||| || || ||||| |||||
Sbjct: 1379 attgtatacatgttcagaacatctgttacagttgtctcaaaatgtgtggtggcatcata 1321
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>gb|AC137623.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0426G01,
             complete sequence
          Length = 173074

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 64/72 (88%)
 Strand = Plus / Minus

                                                                         
Query: 343   ctttccagtaatcagtgtgtacatattaagaacatctgtcacagttgtctcaaagtgagt 402
             ||||||||| |||||||| |||||||||||||| |||||||| ||||||||||| || ||
Sbjct: 10444 ctttccagtgatcagtgtatacatattaagaacgtctgtcaccgttgtctcaaaatgtgt 10385

                         
Query: 403   agtggcgtcata 414
              ||||| |||||
Sbjct: 10384 ggtggcatcata 10373



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                      
Query: 288   tctaatactcttctgcagcgctggcagcactgagatcgacactaagatcaacagtct 344
             ||||||| ||||| ||||| ||||||||||| | ||||||||| |||||||||||||
Sbjct: 10789 tctaatattcttcagcagcactggcagcactcaaatcgacactgagatcaacagtct 10733
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>gb|AC134933.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0579A05,
             complete sequence
          Length = 107407

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 64/72 (88%)
 Strand = Plus / Minus

                                                                         
Query: 343   ctttccagtaatcagtgtgtacatattaagaacatctgtcacagttgtctcaaagtgagt 402
             ||||||||| |||||||| |||||||||||||| |||||||| ||||||||||| || ||
Sbjct: 72289 ctttccagtgatcagtgtatacatattaagaacgtctgtcaccgttgtctcaaaatgtgt 72230

                         
Query: 403   agtggcgtcata 414
              ||||| |||||
Sbjct: 72229 ggtggcatcata 72218



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                      
Query: 288   tctaatactcttctgcagcgctggcagcactgagatcgacactaagatcaacagtct 344
             ||||||| ||||| ||||| ||||||||||| | ||||||||| |||||||||||||
Sbjct: 72634 tctaatattcttcagcagcactggcagcactcaaatcgacactgagatcaacagtct 72578
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 64/72 (88%)
 Strand = Plus / Minus

                                                                            
Query: 343      ctttccagtaatcagtgtgtacatattaagaacatctgtcacagttgtctcaaagtgagt 402
                ||||||||| |||||||| |||||||||||||| |||||||| ||||||||||| || ||
Sbjct: 20338699 ctttccagtgatcagtgtatacatattaagaacgtctgtcaccgttgtctcaaaatgtgt 20338640

                            
Query: 403      agtggcgtcata 414
                 ||||| |||||
Sbjct: 20338639 ggtggcatcata 20338628



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                         
Query: 288      tctaatactcttctgcagcgctggcagcactgagatcgacactaagatcaacagtct 344
                ||||||| ||||| ||||| ||||||||||| | ||||||||| |||||||||||||
Sbjct: 20339044 tctaatattcttcagcagcactggcagcactcaaatcgacactgagatcaacagtct 20338988



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 62/72 (86%)
 Strand = Plus / Minus

                                                                            
Query: 343      ctttccagtaatcagtgtgtacatattaagaacatctgtcacagttgtctcaaagtgagt 402
                |||||| || |||| ||| ||||| ||||||||||||||||| ||||||||||| || ||
Sbjct: 13586688 ctttccggtgatcaatgtatacatgttaagaacatctgtcaccgttgtctcaaaatgtgt 13586629

                            
Query: 403      agtggcgtcata 414
                 ||||| |||||
Sbjct: 13586628 ggtggcatcata 13586617



 Score = 46.1 bits (23), Expect = 0.093
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                       
Query: 287      atctaatactcttctgcagcgctggcagcactgagatcgacactaagatcaacag 341
                |||||||| ||||| || || ||||||||||| | ||| ||||| ||||||||||
Sbjct: 13587005 atctaatattcttcagcggcactggcagcactcaaatcaacactgagatcaacag 13586951
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>gb|AC136525.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0585E02,
             complete sequence
          Length = 138677

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 62/72 (86%)
 Strand = Plus / Minus

                                                                         
Query: 343   ctttccagtaatcagtgtgtacatattaagaacatctgtcacagttgtctcaaagtgagt 402
             |||||| || |||| ||| ||||| ||||||||||||||||| ||||||||||| || ||
Sbjct: 15823 ctttccggtgatcaatgtatacatgttaagaacatctgtcaccgttgtctcaaaatgtgt 15764

                         
Query: 403   agtggcgtcata 414
              ||||| |||||
Sbjct: 15763 ggtggcatcata 15752



 Score = 46.1 bits (23), Expect = 0.093
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                    
Query: 287   atctaatactcttctgcagcgctggcagcactgagatcgacactaagatcaacag 341
             |||||||| ||||| || || ||||||||||| | ||| ||||| ||||||||||
Sbjct: 16140 atctaatattcttcagcggcactggcagcactcaaatcaacactgagatcaacag 16086
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>gb|AC145476.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1023E01,
             complete sequence
          Length = 140322

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 62/72 (86%)
 Strand = Plus / Minus

                                                                         
Query: 343   ctttccagtaatcagtgtgtacatattaagaacatctgtcacagttgtctcaaagtgagt 402
             |||||| || |||| ||| ||||| ||||||||||||||||| ||||||||||| || ||
Sbjct: 42596 ctttccggtgatcaatgtatacatgttaagaacatctgtcaccgttgtctcaaaatgtgt 42537

                         
Query: 403   agtggcgtcata 414
              ||||| |||||
Sbjct: 42536 ggtggcatcata 42525



 Score = 46.1 bits (23), Expect = 0.093
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                    
Query: 287   atctaatactcttctgcagcgctggcagcactgagatcgacactaagatcaacag 341
             |||||||| ||||| || || ||||||||||| | ||| ||||| ||||||||||
Sbjct: 42913 atctaatattcttcagcggcactggcagcactcaaatcaacactgagatcaacag 42859
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>gb|AC153000.5| Medicago truncatula clone mth2-94c2, complete sequence
          Length = 97390

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                             
Query: 293   tactcttctgcagcgctggcagcactgagatc 324
             |||||||||||||| ||||| |||||||||||
Sbjct: 75316 tactcttctgcagcactggcggcactgagatc 75285
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>emb|BX276106.6| Zebrafish DNA sequence from clone DKEY-1N18 in linkage group 6, complete
              sequence
          Length = 220671

 Score = 46.1 bits (23), Expect = 0.093
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 62     ttgttagtacagaataatgttta 84
              |||||||||||||||||||||||
Sbjct: 218269 ttgttagtacagaataatgttta 218247
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>emb|AJ005836.1|CAR5836 Cicer arietinum mRNA for GDP dissociation inhibitor (gdi)
          Length = 1906

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 88/110 (80%)
 Strand = Plus / Minus

                                                                        
Query: 293  tactcttctgcagcgctggcagcactgagatcgacactaagatcaacagtctttccagta 352
            ||||||||||| |||| ||| ||||| ||||| ||||| || |||| |  |||||| || 
Sbjct: 1492 tactcttctgcggcgccggcggcactaagatccacactgaggtcaagaacctttccggtt 1433

                                                              
Query: 353  atcagtgtgtacatattaagaacatctgtcacagttgtctcaaagtgagt 402
            |||| ||| ||||| || ||||| ||    ||||||| ||||||||||||
Sbjct: 1432 atcaatgtatacatgttgagaacgtccagtacagttgactcaaagtgagt 1383
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>gb|U62866.1|VCU62866 Volvox carteri f. nagariensis GDP dissociation inhibitor protein
            GDIV1p (gdiV1) mRNA, complete cds
          Length = 2529

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 389  gtctcaaagtgagtagtggcgtcata 414
            |||||||||||||| |||||||||||
Sbjct: 1314 gtctcaaagtgagtggtggcgtcata 1289
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>gb|AC161886.4| Pan troglodytes BAC clone CH251-708N9 from chromosome 7, complete
             sequence
          Length = 205419

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 65    ttagtacagaataatgtttacaacccagt 93
             ||||| ||||||||||||||||| |||||
Sbjct: 95449 ttagtgcagaataatgtttacaatccagt 95477
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>gb|AC002541.1| Homo sapiens BAC clone CTB-43K6 from 7, complete sequence
          Length = 166983

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 65     ttagtacagaataatgtttacaacccagt 93
              ||||| ||||||||||||||||| |||||
Sbjct: 123074 ttagtgcagaataatgtttacaatccagt 123102
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>emb|CR936845.11| Mouse DNA sequence from clone DN-279H6 on chromosome 11, complete
            sequence
          Length = 101662

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 264  aagaaaatactgggtttgatg 284
            |||||||||||||||||||||
Sbjct: 8059 aagaaaatactgggtttgatg 8039
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>emb|AL356415.26| Human DNA sequence from clone RP3-337D23 on chromosome 6q23.3-25.3
             Contains the 5' end of tomosyn (LOC134957) (contains
             FLJ30922), part of a putative novel gene, a putative novel
             gene and a CpG island, complete sequence
          Length = 140999

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 365   atattaagaacatctgtcaca 385
             |||||||||||||||||||||
Sbjct: 38863 atattaagaacatctgtcaca 38883
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>emb|AL596136.5| Mouse DNA sequence from clone RP23-83I13 on chromosome 11 Contains the
             Rabep1 gene for rabaptin, RAB GTPase binding effector
             protein 1, a ribosomal protein 23a (Rpl23a) pseudogene, a
             ribosomal protein 23A (Rpl23a) pseudogene, the Nup88 gene
             for nucleoporin 88, four novel genes, the C1qbp gene for
             complement component 1 q subcomponent binding protein, the
             Dhx33 gene for DEAH (Asp-Glu-Ala-His) box polypeptide 33,
             a  novel pseudogene, a CARD domain pseudogene and six CpG
             islands, complete sequence
          Length = 254116

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 264   aagaaaatactgggtttgatg 284
             |||||||||||||||||||||
Sbjct: 20777 aagaaaatactgggtttgatg 20757
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>ref|NM_205004.1| Gallus gallus GDP dissociation inhibitor 2 (GDI2), mRNA
          Length = 2286

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 386  gttgtctcaaagtgagtagtggcgtcata 414
            ||||||||||||||||| || ||||||||
Sbjct: 1348 gttgtctcaaagtgagtggtagcgtcata 1320
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>dbj|AK122841.1| Homo sapiens cDNA FLJ16452 fis, clone BRAWH3002467, highly  similar
            to RAB GDP DISSOCIATION INHIBITOR BETA
          Length = 3587

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 386  gttgtctcaaagtgagtagtggcgtcata 414
            ||||||||||| ||||||||||| |||||
Sbjct: 2702 gttgtctcaaaatgagtagtggcatcata 2674
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>dbj|AK137828.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A130022G01 product:unclassifiable, full
            insert sequence
          Length = 2988

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 264  aagaaaatactgggtttgatg 284
            |||||||||||||||||||||
Sbjct: 2661 aagaaaatactgggtttgatg 2641
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>ref|XM_693284.1| PREDICTED: Danio rerio similar to Rgma (LOC569870), mRNA
          Length = 4031

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 369  taagaacatctgtcacagttgtctc 393
            |||||||||||||||||| ||||||
Sbjct: 3255 taagaacatctgtcacagctgtctc 3279
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>ref|XM_702739.1| PREDICTED: Danio rerio similar to Rgma, transcript variant 2
            (LOC563184), mRNA
          Length = 4031

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 369  taagaacatctgtcacagttgtctc 393
            |||||||||||||||||| ||||||
Sbjct: 3255 taagaacatctgtcacagctgtctc 3279
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>gb|AC146074.4| Pan troglodytes BAC clone RP43-15D8 from chromosome 7, complete
             sequence
          Length = 196799

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 65    ttagtacagaataatgtttacaacccagt 93
             ||||| ||||||||||||||||| |||||
Sbjct: 88602 ttagtgcagaataatgtttacaatccagt 88630
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>dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete genome
          Length = 3031430

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 335     tcaacagtctttccagtaatc 355
               |||||||||||||||||||||
Sbjct: 3029230 tcaacagtctttccagtaatc 3029250
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>gb|BC091800.1| Danio rerio RGM domain family, member A, mRNA (cDNA clone MGC:110534
            IMAGE:7140541), complete cds
          Length = 4180

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 369  taagaacatctgtcacagttgtctc 393
            |||||||||||||||||| ||||||
Sbjct: 3261 taagaacatctgtcacagctgtctc 3285
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>gb|AC171018.2| Gallus gallus BAC clone CH261-11F14 from chromosome ul, complete
             sequence
          Length = 216886

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 386   gttgtctcaaagtgagtagtggcgtcata 414
             ||||||||||||||||| || ||||||||
Sbjct: 36017 gttgtctcaaagtgagtggtagcgtcata 35989
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>emb|BX649578.14| Zebrafish DNA sequence from clone CH211-196L7 in linkage group 18,
              complete sequence
          Length = 211922

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 369    taagaacatctgtcacagttgtctc 393
              |||||||||||||||||| ||||||
Sbjct: 193409 taagaacatctgtcacagctgtctc 193385
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>gb|AF144713.1|AF144713 Homo sapiens Rab GDP dissociation inhibitor beta mRNA, partial cds
          Length = 1079

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 386 gttgtctcaaagtgagtagtggcgtcata 414
           ||||||||||| ||||||||||| |||||
Sbjct: 998 gttgtctcaaaatgagtagtggcatcata 970
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>emb|Y13297.1|HSY13297 Homo sapiens gene encoding GDP dissociation inhibitor beta, exon 11
          Length = 971

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 386 gttgtctcaaagtgagtagtggcgtcata 414
           ||||||||||| ||||||||||| |||||
Sbjct: 87  gttgtctcaaaatgagtagtggcatcata 59
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>gb|AF076291.1|AF076291 Gallus gallus Rab-GDP dissociation inhibitor mRNA, complete cds
          Length = 2286

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 386  gttgtctcaaagtgagtagtggcgtcata 414
            ||||||||||||||||| || ||||||||
Sbjct: 1348 gttgtctcaaagtgagtggtagcgtcata 1320
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>gb|BC094316.1| Mus musculus ankyrin repeat domain 41, mRNA (cDNA clone
           IMAGE:5718350)
          Length = 2107

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 148 tcgcgtagtgctgctagcag 167
           ||||||||||||||||||||
Sbjct: 31  tcgcgtagtgctgctagcag 12
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>gb|AC157574.6| Mus musculus BAC clone RP23-1G17 from chromosome 8, complete sequence
          Length = 216443

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 167   ggcgtggacctgaactcctacaca 190
             ||||||||| ||||||||||||||
Sbjct: 55411 ggcgtggacatgaactcctacaca 55388
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>gb|AC127416.7| Mus musculus BAC clone RP23-457J22 from chromosome 8, complete sequence
          Length = 206997

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 148   tcgcgtagtgctgctagcag 167
             ||||||||||||||||||||
Sbjct: 68679 tcgcgtagtgctgctagcag 68660
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>gb|AC113107.15| Mus musculus chromosome 10, clone RP23-325G13, complete sequence
          Length = 207239

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 56     aagccattgttagtacagaa 75
              ||||||||||||||||||||
Sbjct: 147211 aagccattgttagtacagaa 147192
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>emb|CT005241.3| Pan troglodytes chromosome X clone PTB-093L20 map Xq28, complete
             sequence
          Length = 181643

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 264   aagaaaatactgggtttgat 283
             ||||||||||||||||||||
Sbjct: 18926 aagaaaatactgggtttgat 18945
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>gb|AC108830.13| Mus musculus chromosome 8, clone RP23-232G11, complete sequence
          Length = 200841

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 167  ggcgtggacctgaactcctacaca 190
            ||||||||| ||||||||||||||
Sbjct: 9007 ggcgtggacatgaactcctacaca 9030
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>gb|AF548034.1| Trametes sp. I-62 laccase (pox2) mRNA, complete cds
          Length = 1563

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 302  gcagcgctggcagcactgag 321
            ||||||||||||||||||||
Sbjct: 1286 gcagcgctggcagcactgag 1305
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>gb|AC160547.6| Mus musculus chromosome 8, clone RP23-240F23, complete sequence
          Length = 170722

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 148   tcgcgtagtgctgctagcag 167
             ||||||||||||||||||||
Sbjct: 39087 tcgcgtagtgctgctagcag 39068
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>emb|Z93023.1|HS958B3 Human DNA sequence from clone RP5-958B3 on chromosome Xp22.11-22.2,
             complete sequence
          Length = 107467

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 264   aagaaaatactgggtttgat 283
             ||||||||||||||||||||
Sbjct: 98325 aagaaaatactgggtttgat 98306
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>emb|AL590075.8| Human DNA sequence from clone RP11-462L13 on chromosome X, complete
             sequence
          Length = 135711

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 230   attctggtggtgtacctcca 249
             ||||||||||||||||||||
Sbjct: 26623 attctggtggtgtacctcca 26642
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>emb|AJ618983.1| Medicago truncatula gdi gene for GDP dissociation inhibitor
          Length = 1685

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 293  tactcttctgcagcgctggcagcactgagatc 324
            |||||||||||||| |||||  ||||||||||
Sbjct: 1438 tactcttctgcagcactggcgacactgagatc 1407
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>gb|BC030436.1| Mus musculus ankyrin repeat domain 41, mRNA (cDNA clone
           IMAGE:5374477), partial cds
          Length = 1702

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 148 tcgcgtagtgctgctagcag 167
           ||||||||||||||||||||
Sbjct: 73  tcgcgtagtgctgctagcag 54
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>gb|AC105230.10| Homo sapiens chromosome 8, clone RP11-699F21, complete sequence
          Length = 151517

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 193   acacagctgatgtcacaagt 212
             ||||||||||||||||||||
Sbjct: 83516 acacagctgatgtcacaagt 83497
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>ref|XM_688593.1| PREDICTED: Danio rerio similar to Orphan sodium- and
            chloride-dependent neurotransmitter transporter NTT73
            (Orphan transporter v7-3) (Solute carrier family 6 member
            15) (LOC565315), mRNA
          Length = 2226

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 105  gaagttaacgaaggaaaccagcac 128
            |||||||| |||||||||||||||
Sbjct: 1047 gaagttaatgaaggaaaccagcac 1024
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>ref|XM_682738.1| PREDICTED: Danio rerio similar to Orphan sodium- and
            chloride-dependent neurotransmitter transporter NTT73
            (Orphan transporter v7-3) (Solute carrier family 6 member
            15), transcript variant 1 (LOC564144), mRNA
          Length = 2226

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 105  gaagttaacgaaggaaaccagcac 128
            |||||||| |||||||||||||||
Sbjct: 1047 gaagttaatgaaggaaaccagcac 1024
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>ref|XM_703814.1| PREDICTED: Danio rerio similar to Orphan sodium- and
            chloride-dependent neurotransmitter transporter NTT73
            (Orphan transporter v7-3) (Solute carrier family 6 member
            15), transcript variant 2 (LOC564144), mRNA
          Length = 1989

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 105  gaagttaacgaaggaaaccagcac 128
            |||||||| |||||||||||||||
Sbjct: 1041 gaagttaatgaaggaaaccagcac 1018
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>dbj|AK080768.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library,
           clone:A930105O07 product:weakly similar to PROBABLE
           (HHV-6) U1102, VARIANT A DNA, COMPLETE VIRION GENOME
           (FRAGMENT) [Leishmania major], full insert sequence
          Length = 2411

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 148 tcgcgtagtgctgctagcag 167
           ||||||||||||||||||||
Sbjct: 70  tcgcgtagtgctgctagcag 51
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>dbj|AK087444.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched
           library, clone:E130119O17 product:hypothetical protein,
           full insert sequence
          Length = 2417

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 148 tcgcgtagtgctgctagcag 167
           ||||||||||||||||||||
Sbjct: 70  tcgcgtagtgctgctagcag 51
to top
>dbj|AK083552.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:D030044A02 product:hypothetical
           protein, full insert sequence
          Length = 3071

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 148 tcgcgtagtgctgctagcag 167
           ||||||||||||||||||||
Sbjct: 57  tcgcgtagtgctgctagcag 38
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>dbj|AK049395.1| Mus musculus 7 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:C430003I23 product:hypothetical
           protein, full insert sequence
          Length = 2442

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 148 tcgcgtagtgctgctagcag 167
           ||||||||||||||||||||
Sbjct: 65  tcgcgtagtgctgctagcag 46
to top
>dbj|AK078830.1| Mus musculus 16 days embryo lung cDNA, RIKEN full-length enriched
           library, clone:8430438L13 product:hypothetical protein,
           full insert sequence
          Length = 1936

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 148 tcgcgtagtgctgctagcag 167
           ||||||||||||||||||||
Sbjct: 65  tcgcgtagtgctgctagcag 46
to top
>ref|XM_341409.2| PREDICTED: Rattus norvegicus similar to 8430438L13Rik protein
           (predicted) (LOC361122), mRNA
          Length = 1377

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 148 tcgcgtagtgctgctagcag 167
           ||||||||||||||||||||
Sbjct: 50  tcgcgtagtgctgctagcag 31
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>gb|AC009430.2|AC009430 Homo sapiens, clone RP11-45O17, complete sequence
          Length = 156454

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 230    attctggtggtgtacctcca 249
              ||||||||||||||||||||
Sbjct: 125643 attctggtggtgtacctcca 125624
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>emb|CR318631.5| Zebrafish DNA sequence from clone DKEY-207D5 in linkage group 18,
             complete sequence
          Length = 189711

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 105   gaagttaacgaaggaaaccagcac 128
             |||||||| |||||||||||||||
Sbjct: 46672 gaagttaatgaaggaaaccagcac 46695
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>emb|BX649507.3| Zebrafish DNA sequence from clone CH211-154H20 in linkage group 18,
              complete sequence
          Length = 166185

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 105    gaagttaacgaaggaaaccagcac 128
              |||||||| |||||||||||||||
Sbjct: 106683 gaagttaatgaaggaaaccagcac 106660
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>emb|AL928866.7| Zebrafish DNA sequence from clone DKEY-11E23 in linkage group 20,
            complete sequence
          Length = 249759

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 381  tcacagttgtctcaaagtga 400
            ||||||||||||||||||||
Sbjct: 5393 tcacagttgtctcaaagtga 5374
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>emb|BX000347.7| Zebrafish DNA sequence from clone DKEY-66C4 in linkage group 18, complete
              sequence
          Length = 155713

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 105    gaagttaacgaaggaaaccagcac 128
              |||||||| |||||||||||||||
Sbjct: 118331 gaagttaatgaaggaaaccagcac 118308
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>gb|AC007632.4|AC007632 Homo sapiens clone R529C19B from chromosome 18, complete sequence
          Length = 205959

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 349   agtaatcagtgtgtacatattaag 372
             |||||||||||||| |||||||||
Sbjct: 56160 agtaatcagtgtgtgcatattaag 56137
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>ref|NM_172756.1| Mus musculus ankyrin repeat domain 41 (Ankrd41), mRNA
          Length = 2411

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 148 tcgcgtagtgctgctagcag 167
           ||||||||||||||||||||
Sbjct: 70  tcgcgtagtgctgctagcag 51
to top
>gb|U65400.1|PGU65400 Basidiomycete CECT 20197 phenoloxidase (pox2) gene, complete cds
          Length = 2400

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 302  gcagcgctggcagcactgag 321
            ||||||||||||||||||||
Sbjct: 1841 gcagcgctggcagcactgag 1860
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>emb|AL808126.10| Mouse DNA sequence from clone RP23-37B4 on chromosome 2, complete
             sequence
          Length = 94874

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 379   tgtcacagttgtctcaaagtgagt 402
             ||||||||||||||| ||||||||
Sbjct: 26058 tgtcacagttgtctctaagtgagt 26035
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>gb|AF440524.1| Pseudomonas aeruginosa strain SG17M genomic sequence, integrated gene
             island PAGI-3(SG)
          Length = 128136

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 300   ctgcagcgctggcagcactg 319
             ||||||||||||||||||||
Sbjct: 56082 ctgcagcgctggcagcactg 56101


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,766,096
Number of Sequences: 3902068
Number of extensions: 3766096
Number of successful extensions: 63656
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 63515
Number of HSP's gapped (non-prelim): 141
length of query: 429
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 407
effective length of database: 17,147,199,772
effective search space: 6978910307204
effective search space used: 6978910307204
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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