ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd27a08 |
|---|---|
| Clone Library Name | barley_pub |
>TMBI4_MOUSE (Q9DA39) Transmembrane BAX inhibitor motif-containing protein 4| (Z-protein) Length = 238 Score = 50.1 bits (118), Expect = 2e-06 Identities = 21/41 (51%), Positives = 33/41 (80%) Frame = -3 Query: 431 GFIVYDTENLIKRHTYDEYIWASVELYLDILNLFLTILQML 309 GFI+YDT +L+ R + +EY+ A++ LY+DI+NLFL +L+ L Sbjct: 192 GFIIYDTHSLMHRLSPEEYVIAAISLYMDIINLFLHLLKFL 232
>TMBI4_HUMAN (Q9HC24) Transmembrane BAX inhibitor motif-containing protein 4| (Z-protein) (S1R protein) Length = 238 Score = 50.1 bits (118), Expect = 2e-06 Identities = 21/41 (51%), Positives = 33/41 (80%) Frame = -3 Query: 431 GFIVYDTENLIKRHTYDEYIWASVELYLDILNLFLTILQML 309 GFI+YDT +L+ + + +EY+ A++ LYLDI+NLFL +L+ L Sbjct: 192 GFIIYDTHSLMHKLSPEEYVLAAISLYLDIINLFLHLLRFL 232
>Y920_HELPY (O25578) Hypothetical protein HP0920| Length = 230 Score = 44.7 bits (104), Expect = 1e-04 Identities = 21/40 (52%), Positives = 31/40 (77%) Frame = -3 Query: 428 FIVYDTENLIKRHTYDEYIWASVELYLDILNLFLTILQML 309 +I YDT+N++K YD I A+V LYLD LN+F++ILQ++ Sbjct: 184 YIAYDTQNIVKG-MYDSPIDAAVSLYLDFLNVFISILQII 222
>Y920_HELPJ (Q9ZKT1) Hypothetical protein jhp_0854| Length = 230 Score = 44.7 bits (104), Expect = 1e-04 Identities = 21/40 (52%), Positives = 31/40 (77%) Frame = -3 Query: 428 FIVYDTENLIKRHTYDEYIWASVELYLDILNLFLTILQML 309 +I YDT+N++K YD I A+V LYLD LN+F++ILQ++ Sbjct: 184 YIAYDTQNIVKG-MYDSPIDAAVSLYLDFLNVFISILQII 222
>Y236_CAMJE (Q9PIQ8) Hypothetical protein Cj0236c| Length = 231 Score = 42.0 bits (97), Expect = 6e-04 Identities = 20/41 (48%), Positives = 31/41 (75%) Frame = -3 Query: 428 FIVYDTENLIKRHTYDEYIWASVELYLDILNLFLTILQMLR 306 +I+YDT+N+I R Y+ I +V LYLD +NLF+++L +LR Sbjct: 187 YILYDTQNII-RGNYETPIEGAVALYLDFVNLFVSLLNILR 226
>BI1_PONPY (Q5R7R1) Bax inhibitor 1 (BI-1) (Testis-enhanced gene transcript)| Length = 237 Score = 41.6 bits (96), Expect = 8e-04 Identities = 16/47 (34%), Positives = 32/47 (68%), Gaps = 2/47 (4%) Frame = -3 Query: 431 GFIVYDTENLIKR--HTYDEYIWASVELYLDILNLFLTILQMLRQND 297 GF+++DT+ +I++ H +YIW ++L+LD + LF ++ +L N+ Sbjct: 183 GFVLFDTQLIIEKAEHGDQDYIWHCIDLFLDFITLFRKLMMILAMNE 229
>YT64_CAEEL (Q11080) Hypothetical protein B0563.4 in chromosome X| Length = 276 Score = 40.4 bits (93), Expect = 0.002 Identities = 18/41 (43%), Positives = 30/41 (73%) Frame = -3 Query: 425 IVYDTENLIKRHTYDEYIWASVELYLDILNLFLTILQMLRQ 303 +V D + ++ R + ++YI A V LY+DILNLF+ ILQ++ + Sbjct: 233 LVIDLDMIMYRFSPEDYICACVSLYMDILNLFIRILQIVAE 273
>BI1_HUMAN (P55061) Bax inhibitor 1 (BI-1) (Testis-enhanced gene transcript)| (Transmembrane BAX inhibitor motif-containing protein 6) Length = 237 Score = 40.4 bits (93), Expect = 0.002 Identities = 15/47 (31%), Positives = 32/47 (68%), Gaps = 2/47 (4%) Frame = -3 Query: 431 GFIVYDTENLIKR--HTYDEYIWASVELYLDILNLFLTILQMLRQND 297 GF+++DT+ +I++ H +YIW ++L+LD + +F ++ +L N+ Sbjct: 183 GFVLFDTQLIIEKAEHGDQDYIWHCIDLFLDFITVFRKLMMILAMNE 229
>BI1_MOUSE (Q9D2C7) Bax inhibitor 1 (BI-1) (Testis-enhanced gene transcript)| Length = 237 Score = 39.3 bits (90), Expect = 0.004 Identities = 17/47 (36%), Positives = 32/47 (68%), Gaps = 2/47 (4%) Frame = -3 Query: 431 GFIVYDTENLIKR--HTYDEYIWASVELYLDILNLFLTILQMLRQND 297 GF+++DT+ +I++ H +YIW V+L+LD + LF ++ +L N+ Sbjct: 183 GFVLFDTQLIIEKAEHGDKDYIWHCVDLFLDFVTLFRKLMLILAFNE 229
>Y1358_VIBCH (Q9KSA1) Hypothetical protein VC1358| Length = 223 Score = 38.9 bits (89), Expect = 0.005 Identities = 21/48 (43%), Positives = 32/48 (66%), Gaps = 3/48 (6%) Frame = -3 Query: 431 GFIVYDTENLIKRHTYDEYIWASVELYLDILNLF---LTILQMLRQND 297 GFI++DT ++ R YI A++ +YL+ILNLF L+IL ++ ND Sbjct: 177 GFILFDTSRIV-RGEETNYISATISMYLNILNLFTSLLSILGIMNNND 223
>BI1_RAT (P55062) Bax inhibitor 1 (BI-1) (Testis-enhanced gene transcript)| Length = 237 Score = 38.9 bits (89), Expect = 0.005 Identities = 16/47 (34%), Positives = 32/47 (68%), Gaps = 2/47 (4%) Frame = -3 Query: 431 GFIVYDTENLIKR--HTYDEYIWASVELYLDILNLFLTILQMLRQND 297 GF+++DT+ +I++ H +YIW ++L+LD + LF ++ +L N+ Sbjct: 183 GFVLFDTQLIIEKAEHGDKDYIWHCIDLFLDFVTLFRKLMLILAFNE 229
>BI1_PAROL (Q9IA79) Probable Bax inhibitor 1 (BI-1)| Length = 237 Score = 38.1 bits (87), Expect = 0.009 Identities = 16/47 (34%), Positives = 32/47 (68%), Gaps = 2/47 (4%) Frame = -3 Query: 431 GFIVYDTENLIKR--HTYDEYIWASVELYLDILNLFLTILQMLRQND 297 GF++ DT+ +I++ + +Y+W SV+L+LD + +F ++ +L ND Sbjct: 183 GFVLXDTQLIIEKAENGDKDYVWHSVDLFLDFITIFRKLMVILALND 229
>YN45_YEAST (P48558) Hypothetical 33.6 kDa protein in MCK1-RPS19B intergenic| region Length = 297 Score = 36.6 bits (83), Expect = 0.027 Identities = 16/45 (35%), Positives = 32/45 (71%) Frame = -3 Query: 428 FIVYDTENLIKRHTYDEYIWASVELYLDILNLFLTILQMLRQNDN 294 ++ DT+ + ++ DE + ++ LYLDI+NLFL+IL++L +++ Sbjct: 251 YLFIDTQLIFRKVYPDEEVRCAMMLYLDIVNLFLSILRILANSND 295
>FAIM2_MOUSE (Q8K097) Fas apoptotic inhibitory molecule 2 (Lifeguard protein)| Length = 317 Score = 34.7 bits (78), Expect = 0.10 Identities = 17/47 (36%), Positives = 31/47 (65%), Gaps = 4/47 (8%) Frame = -3 Query: 428 FIVYDTENLI--KRHTY--DEYIWASVELYLDILNLFLTILQMLRQN 300 F+ +DT+ L+ +RH+ +EYI+ ++ +YLDI+ +F LQ+ N Sbjct: 269 FLAFDTQLLMGNRRHSLSPEEYIFGALNIYLDIIYIFTFFLQLFGTN 315
>FAIM2_RAT (O88407) Fas apoptotic inhibitory molecule 2 (Lifeguard protein)| (Neural membrane protein 35) Length = 316 Score = 34.7 bits (78), Expect = 0.10 Identities = 17/47 (36%), Positives = 31/47 (65%), Gaps = 4/47 (8%) Frame = -3 Query: 428 FIVYDTENLI--KRHTY--DEYIWASVELYLDILNLFLTILQMLRQN 300 F+ +DT+ L+ +RH+ +EYI+ ++ +YLDI+ +F LQ+ N Sbjct: 268 FLAFDTQLLMGNRRHSLSPEEYIFGALNIYLDIIYIFTFFLQLFGTN 314
>BI1_DROME (Q9VSH3) Probable Bax inhibitor 1 (BI-1)| Length = 245 Score = 34.3 bits (77), Expect = 0.13 Identities = 15/46 (32%), Positives = 32/46 (69%), Gaps = 2/46 (4%) Frame = -3 Query: 428 FIVYDTENLIK--RHTYDEYIWASVELYLDILNLFLTILQMLRQND 297 FIVYDT+N+++ R+ + + +++L+ D+L++F +L +L Q + Sbjct: 187 FIVYDTQNIVEKCRNGNRDVVQHALDLFFDVLSMFRRLLIILTQKE 232
>TMBI1_MOUSE (Q8BJZ3) Transmembrane BAX inhibitor motif-containing protein 1| (RECS1 protein) (Responsive to centrifugal force and shear stress gene 1 protein) Length = 309 Score = 33.9 bits (76), Expect = 0.17 Identities = 15/48 (31%), Positives = 32/48 (66%), Gaps = 4/48 (8%) Frame = -3 Query: 428 FIVYDTENLI--KRHTY--DEYIWASVELYLDILNLFLTILQMLRQND 297 F+ YDT+ ++ ++HT ++YI ++++Y DI+ +F +LQ++ D Sbjct: 262 FLAYDTQLVLGNRKHTISPEDYITGALQIYTDIVYIFTFVLQLVGSRD 309
>FAIM2_HUMAN (Q9BWQ8) Fas apoptotic inhibitory molecule 2 (Lifeguard protein)| (Transmembrane BAX inhibitor motif-containing protein 2) Length = 316 Score = 33.1 bits (74), Expect = 0.29 Identities = 17/47 (36%), Positives = 30/47 (63%), Gaps = 4/47 (8%) Frame = -3 Query: 428 FIVYDTENLI--KRHTY--DEYIWASVELYLDILNLFLTILQMLRQN 300 F+ DT+ L+ +RH+ +EYI+ ++ +YLDI+ +F LQ+ N Sbjct: 268 FLALDTQLLMGNRRHSLSPEEYIFGALNIYLDIIYIFTFFLQLFGTN 314
>TMBI1_HUMAN (Q969X1) Transmembrane BAX inhibitor motif-containing protein 1| (RECS1 protein homolog) Length = 311 Score = 33.1 bits (74), Expect = 0.29 Identities = 14/44 (31%), Positives = 31/44 (70%), Gaps = 4/44 (9%) Frame = -3 Query: 428 FIVYDTENLI--KRHTY--DEYIWASVELYLDILNLFLTILQML 309 F+ YDT+ ++ ++HT ++YI ++++Y DI+ +F +LQ++ Sbjct: 264 FLAYDTQLVLGNRKHTISPEDYITGALQIYTDIIYIFTFVLQLM 307
>Y539_BORBU (O51489) Hypothetical protein BB0539| Length = 232 Score = 32.7 bits (73), Expect = 0.38 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 9/55 (16%) Frame = -3 Query: 431 GFIVYDTENLIK--RHTYDEY-------IWASVELYLDILNLFLTILQMLRQNDN 294 G YD +N+ K + D+ + AS++LYLD +NLFL +L+ L Q N Sbjct: 177 GLTAYDVQNISKMDKMLQDDTEIKNRMAVVASLKLYLDFINLFLYLLRFLGQRRN 231
>GHITM_HUMAN (Q9H3K2) Growth hormone-inducible transmembrane protein (Dermal| papilla-derived protein 2) (Transmembrane BAX inhibitor motif-containing protein 5) Length = 345 Score = 32.3 bits (72), Expect = 0.50 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 9/54 (16%) Frame = -3 Query: 428 FIVYDTENLIKR---------HTYDEYIWASVELYLDILNLFLTILQMLRQNDN 294 F++YDT+ +IKR YD I + + +Y+D LN+F+ + ML N Sbjct: 290 FLLYDTQKVIKRAEVSPMYGVQKYDP-INSMLSIYMDTLNIFMRVATMLATGGN 342
>US21_HCMVA (P09723) Hypothetical protein HWLF2| Length = 239 Score = 32.0 bits (71), Expect = 0.65 Identities = 12/39 (30%), Positives = 27/39 (69%) Frame = -3 Query: 425 IVYDTENLIKRHTYDEYIWASVELYLDILNLFLTILQML 309 +V DT++++ Y+ YI ++ LY+D++ LF+++L + Sbjct: 175 VVCDTQDILHDIEYESYIPGALCLYMDLMYLFVSVLYFM 213
>YCCA_ECOLI (P0AAC6) Inner membrane protein yccA| Length = 219 Score = 31.2 bits (69), Expect = 1.1 Identities = 15/41 (36%), Positives = 28/41 (68%) Frame = -3 Query: 431 GFIVYDTENLIKRHTYDEYIWASVELYLDILNLFLTILQML 309 G I+++T N+I + YI A+V LY+ + N+F+++L +L Sbjct: 174 GAILFETSNIIHGGETN-YIRATVSLYVSLYNIFVSLLSIL 213
>YCCA_ECOL6 (P0AAC7) Inner membrane protein yccA| Length = 219 Score = 31.2 bits (69), Expect = 1.1 Identities = 15/41 (36%), Positives = 28/41 (68%) Frame = -3 Query: 431 GFIVYDTENLIKRHTYDEYIWASVELYLDILNLFLTILQML 309 G I+++T N+I + YI A+V LY+ + N+F+++L +L Sbjct: 174 GAILFETSNIIHGGETN-YIRATVSLYVSLYNIFVSLLSIL 213
>BI1_ORYSA (Q9MBD8) Bax inhibitor 1 (BI-1) (OsBI-1)| Length = 249 Score = 30.8 bits (68), Expect = 1.5 Identities = 15/46 (32%), Positives = 30/46 (65%), Gaps = 2/46 (4%) Frame = -3 Query: 431 GFIVYDTENLIKR--HTYDEYIWASVELYLDILNLFLTILQMLRQN 300 G++VYDT+ +I+R H +YI ++ L+ D + + + IL ++ +N Sbjct: 190 GYMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVRILVIMLKN 235
>Y2604_PSEAE (Q03268) Hypothetical protein PA2604| Length = 222 Score = 30.0 bits (66), Expect = 2.5 Identities = 15/38 (39%), Positives = 25/38 (65%) Frame = -3 Query: 425 IVYDTENLIKRHTYDEYIWASVELYLDILNLFLTILQM 312 I+Y T +I + YI A++ LY+ I NLF+++LQ+ Sbjct: 178 ILYQTSAIIHGGERN-YIMATISLYVSIYNLFISLLQI 214
>ETS6_DROME (P29776) DNA-binding protein D-ETS-6| Length = 475 Score = 30.0 bits (66), Expect = 2.5 Identities = 13/31 (41%), Positives = 15/31 (48%) Frame = -2 Query: 375 HLGFC*TLPRHPQPVPHHPTDAQAERQLMSP 283 H G L RHP P+ HHP + QL P Sbjct: 363 HAGGAMQLGRHPPPLHHHPQHSHPHHQLGQP 393
>GIDA_TREDE (Q73PH1) tRNA uridine 5-carboxymethylaminomethyl modification| enzyme gidA (Glucose-inhibited division protein A) Length = 628 Score = 29.3 bits (64), Expect = 4.2 Identities = 15/30 (50%), Positives = 21/30 (70%) Frame = +1 Query: 139 HIGCTLASSLDDGKNSLPCLPSYVDSNSKD 228 HIG +LA +L D + SL C+ + +D NSKD Sbjct: 514 HIGKSLADALHDPQVSLECICA-IDENSKD 542
>Y408_STRP8 (Q8P2D4) Hypothetical membrane protein spyM18_0408| Length = 229 Score = 29.3 bits (64), Expect = 4.2 Identities = 12/28 (42%), Positives = 21/28 (75%), Gaps = 3/28 (10%) Frame = -3 Query: 371 WA---SVELYLDILNLFLTILQMLRQND 297 WA ++ LYLD +NLF+++L++ +ND Sbjct: 202 WAVAMALSLYLDFINLFISLLRIFGRND 229
>Y358_STRP1 (Q9A1B9) Hypothetical membrane protein SPy0358/M5005_Spy0301| Length = 229 Score = 29.3 bits (64), Expect = 4.2 Identities = 12/28 (42%), Positives = 21/28 (75%), Gaps = 3/28 (10%) Frame = -3 Query: 371 WA---SVELYLDILNLFLTILQMLRQND 297 WA ++ LYLD +NLF+++L++ +ND Sbjct: 202 WAVAMALSLYLDFINLFISLLRIFGRND 229
>Y327_STRP6 (Q5XDQ1) Hypothetical membrane protein M6_Spy0327| Length = 229 Score = 29.3 bits (64), Expect = 4.2 Identities = 12/28 (42%), Positives = 21/28 (75%), Gaps = 3/28 (10%) Frame = -3 Query: 371 WA---SVELYLDILNLFLTILQMLRQND 297 WA ++ LYLD +NLF+++L++ +ND Sbjct: 202 WAVAMALSLYLDFINLFISLLRIFGRND 229
>Y260_STRP3 (Q8K8I9) Hypothetical membrane protein SpyM3_0260/SPs1599| Length = 229 Score = 29.3 bits (64), Expect = 4.2 Identities = 12/28 (42%), Positives = 21/28 (75%), Gaps = 3/28 (10%) Frame = -3 Query: 371 WA---SVELYLDILNLFLTILQMLRQND 297 WA ++ LYLD +NLF+++L++ +ND Sbjct: 202 WAVAMALSLYLDFINLFISLLRIFGRND 229 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,080,309 Number of Sequences: 219361 Number of extensions: 995297 Number of successful extensions: 2331 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 2273 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2324 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2453576370 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
