ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd27a08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC135418.3| Oryza sativa (japonica cultivar-group) chromosome... 131 2e-27
2gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome... 131 2e-27
3dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 131 2e-27
4dbj|AK104366.1| Oryza sativa (japonica cultivar-group) cDNA clon... 131 2e-27
5dbj|AK104199.1| Oryza sativa (japonica cultivar-group) cDNA clon... 131 2e-27
6dbj|AK070043.1| Oryza sativa (japonica cultivar-group) cDNA clon... 131 2e-27
7gb|BT016325.1| Zea mays clone Contig158 mRNA sequence 119 8e-24
8gb|AY104589.1| Zea mays PCO067801 mRNA sequence 119 8e-24
9ref|XM_367013.1| Magnaporthe grisea 70-15 chromosome VII hypothe... 54 4e-04
10gb|AC162030.8| Medicago truncatula clone mth2-178b21, complete s... 54 4e-04
11ref|XM_748615.1| Aspergillus fumigatus Af293 hypothetical protei... 50 0.006
12emb|AJ879936.2| Capsicum chinense mRNA for putative receptor ass... 50 0.006
13ref|NM_116196.1| Arabidopsis thaliana glutamate binding AT3G6331... 48 0.024
14gb|BT020236.1| Arabidopsis thaliana At3g63310 gene, complete cds 48 0.024
15emb|AL163818.1|ATMAA21 Arabidopsis thaliana DNA chromosome 3, P1... 48 0.024
16emb|AL138648.2|ATF16M2 Arabidopsis thaliana DNA chromosome 3, BA... 48 0.024
17gb|BT021132.1| Arabidopsis thaliana At3g63310 gene, complete cds 48 0.024
18emb|BX470168.7| Zebrafish DNA sequence from clone CH211-288L20 i... 46 0.094
19emb|BX322791.7| Zebrafish DNA sequence from clone RP71-55E12, co... 46 0.094
20emb|BX825703.1|CNS0A67U Arabidopsis thaliana Full-length cDNA Co... 46 0.094
21gb|BT014369.1| Lycopersicon esculentum clone 133657R, mRNA sequence 44 0.37
22gb|BT014225.1| Lycopersicon esculentum clone 133420R, mRNA sequence 44 0.37
23gb|AC159332.11| Mus musculus 6 BAC RP23-413D8 (Roswell Park Canc... 44 0.37
24emb|CR388214.5| Zebrafish DNA sequence from clone CH211-269E4 in... 44 0.37
25ref|XM_476832.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.5
26emb|AL954324.10| Zebrafish DNA sequence from clone DKEY-35P13 in... 42 1.5
27ref|XM_389598.1| Gibberella zeae PH-1 chromosome 4 hypothetical ... 42 1.5
28emb|BX324123.4| Zebrafish DNA sequence from clone DKEY-106L3 in ... 42 1.5
29gb|DQ397838.1| Cenarchaeum symbiosum clone C03H05, complete sequ... 42 1.5
30dbj|AB194635.1| Leek yellow stripe virus gene for coat protein, ... 42 1.5
31dbj|AB194634.1| Leek yellow stripe virus gene for coat protein, ... 42 1.5
32dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
33dbj|AP003826.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
34dbj|AP004307.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
35dbj|AK073781.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
36gb|AC007156.2|AC007156 Homo sapiens chromosome 18, clone hRPK.41... 42 1.5
37dbj|AP005271.4| Homo sapiens genomic DNA, chromosome 18 clone:RP... 42 1.5
38gb|AC138769.4| Mus musculus chromosome 18 clone RP23-235B1, comp... 40 5.8
39emb|AL672211.7| Zebrafish DNA sequence from clone BUSM1-6A2 in l... 40 5.8
40emb|CR450720.5| Zebrafish DNA sequence from clone DKEYP-51F11 in... 40 5.8
41gb|AF097907.1| Rana catesbeiana myosin heavy chain (MHC-4) mRNA,... 40 5.8
42gb|DQ397875.1| Cenarchaeum symbiosum clone C07F02, complete sequ... 40 5.8
43gb|DQ397873.1| Cenarchaeum symbiosum clone C13A11, complete sequ... 40 5.8
44gb|DQ397858.1| Cenarchaeum symbiosum clone C05G02, complete sequ... 40 5.8
45gb|DQ397630.1| Cenarchaeum symbiosum clone C01C08, complete sequ... 40 5.8
46gb|DQ060521.1| Bean yellow mosaic virus polyprotein mRNA, partia... 40 5.8
47emb|BX276115.11| Zebrafish DNA sequence from clone DKEY-274M17 i... 40 5.8
48emb|BX465842.5| Zebrafish DNA sequence from clone DKEY-164P3 in ... 40 5.8
49gb|AC026736.4|AC026736 Homo sapiens chromosome 5 clone CTD-2350M... 40 5.8
50emb|BX957241.13| Zebrafish DNA sequence from clone CH211-197N10 ... 40 5.8
51emb|BX276097.12| Zebrafish DNA sequence from clone DKEY-97C6 in ... 40 5.8
52emb|AL954739.9| Zebrafish DNA sequence from clone CH211-192K9 in... 40 5.8
53emb|BX004994.6| Zebrafish DNA sequence from clone DKEY-24J15 in ... 40 5.8
54emb|BX001024.7| Zebrafish DNA sequence from clone CH211-42I24, c... 40 5.8 
>gb|AC135418.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0035J16,
              complete sequence
          Length = 170233

 Score =  131 bits (66), Expect = 2e-27
 Identities = 96/106 (90%)
 Strand = Plus / Plus

                                                                          
Query: 328    aggaacaggttgaggatgtcgaggtaaagttcaacagaagcccagatgtactcgtcataa 387
              ||||||| |||||||||||| ||||| || |||||||| ||||| ||||| |||||||||
Sbjct: 147801 aggaacaagttgaggatgtcaaggtagagctcaacagaggcccaaatgtagtcgtcataa 147860

                                                            
Query: 388    gtgtggcgctttatcaagttctcagtgtcgtagacgatgaagcctg 433
              ||||||||||||||||||||||| |||||||||| |||||| ||||
Sbjct: 147861 gtgtggcgctttatcaagttctctgtgtcgtagatgatgaaacctg 147906
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>gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0006J12, complete sequence
          Length = 157069

 Score =  131 bits (66), Expect = 2e-27
 Identities = 96/106 (90%)
 Strand = Plus / Plus

                                                                         
Query: 328   aggaacaggttgaggatgtcgaggtaaagttcaacagaagcccagatgtactcgtcataa 387
             ||||||| |||||||||||| ||||| || |||||||| ||||| ||||| |||||||||
Sbjct: 45164 aggaacaagttgaggatgtcaaggtagagctcaacagaggcccaaatgtagtcgtcataa 45223

                                                           
Query: 388   gtgtggcgctttatcaagttctcagtgtcgtagacgatgaagcctg 433
             ||||||||||||||||||||||| |||||||||| |||||| ||||
Sbjct: 45224 gtgtggcgctttatcaagttctctgtgtcgtagatgatgaaacctg 45269
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  131 bits (66), Expect = 2e-27
 Identities = 96/106 (90%)
 Strand = Plus / Plus

                                                                            
Query: 328      aggaacaggttgaggatgtcgaggtaaagttcaacagaagcccagatgtactcgtcataa 387
                ||||||| |||||||||||| ||||| || |||||||| ||||| ||||| |||||||||
Sbjct: 19444452 aggaacaagttgaggatgtcaaggtagagctcaacagaggcccaaatgtagtcgtcataa 19444511

                                                              
Query: 388      gtgtggcgctttatcaagttctcagtgtcgtagacgatgaagcctg 433
                ||||||||||||||||||||||| |||||||||| |||||| ||||
Sbjct: 19444512 gtgtggcgctttatcaagttctctgtgtcgtagatgatgaaacctg 19444557
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>dbj|AK104366.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-D07, full
           insert sequence
          Length = 1060

 Score =  131 bits (66), Expect = 2e-27
 Identities = 96/106 (90%)
 Strand = Plus / Minus

                                                                       
Query: 328 aggaacaggttgaggatgtcgaggtaaagttcaacagaagcccagatgtactcgtcataa 387
           ||||||| |||||||||||| ||||| || |||||||| ||||| ||||| |||||||||
Sbjct: 832 aggaacaagttgaggatgtcaaggtagagctcaacagaggcccaaatgtagtcgtcataa 773

                                                         
Query: 388 gtgtggcgctttatcaagttctcagtgtcgtagacgatgaagcctg 433
           ||||||||||||||||||||||| |||||||||| |||||| ||||
Sbjct: 772 gtgtggcgctttatcaagttctctgtgtcgtagatgatgaaacctg 727
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>dbj|AK104199.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-A08, full
           insert sequence
          Length = 1060

 Score =  131 bits (66), Expect = 2e-27
 Identities = 96/106 (90%)
 Strand = Plus / Minus

                                                                       
Query: 328 aggaacaggttgaggatgtcgaggtaaagttcaacagaagcccagatgtactcgtcataa 387
           ||||||| |||||||||||| ||||| || |||||||| ||||| ||||| |||||||||
Sbjct: 832 aggaacaagttgaggatgtcaaggtagagctcaacagaggcccaaatgtagtcgtcataa 773

                                                         
Query: 388 gtgtggcgctttatcaagttctcagtgtcgtagacgatgaagcctg 433
           ||||||||||||||||||||||| |||||||||| |||||| ||||
Sbjct: 772 gtgtggcgctttatcaagttctctgtgtcgtagatgatgaaacctg 727
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>dbj|AK070043.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039E14, full
           insert sequence
          Length = 1106

 Score =  131 bits (66), Expect = 2e-27
 Identities = 96/106 (90%)
 Strand = Plus / Minus

                                                                       
Query: 328 aggaacaggttgaggatgtcgaggtaaagttcaacagaagcccagatgtactcgtcataa 387
           ||||||| |||||||||||| ||||| || |||||||| ||||| ||||| |||||||||
Sbjct: 833 aggaacaagttgaggatgtcaaggtagagctcaacagaggcccaaatgtagtcgtcataa 774

                                                         
Query: 388 gtgtggcgctttatcaagttctcagtgtcgtagacgatgaagcctg 433
           ||||||||||||||||||||||| |||||||||| |||||| ||||
Sbjct: 773 gtgtggcgctttatcaagttctctgtgtcgtagatgatgaaacctg 728
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>gb|BT016325.1| Zea mays clone Contig158 mRNA sequence
          Length = 1172

 Score =  119 bits (60), Expect = 8e-24
 Identities = 111/128 (86%)
 Strand = Plus / Minus

                                                                       
Query: 306 cctgagcatctgtaggatggtgaggaacaggttgaggatgtcgaggtaaagttcaacaga 365
           ||||||||| |  ||||||| |||||||||||| |||||||||||||| ||  |||| ||
Sbjct: 862 cctgagcatgttcaggatggagaggaacaggttcaggatgtcgaggtacagcccaaccga 803

                                                                       
Query: 366 agcccagatgtactcgtcataagtgtggcgctttatcaagttctcagtgtcgtagacgat 425
            ||||||||||||||||| || ||||||||||| |||| |||||| |||||||| | |||
Sbjct: 802 cgcccagatgtactcgtcgtaggtgtggcgcttgatcaggttctcggtgtcgtacaggat 743

                   
Query: 426 gaagcctg 433
           ||||||||
Sbjct: 742 gaagcctg 735
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>gb|AY104589.1| Zea mays PCO067801 mRNA sequence
          Length = 1197

 Score =  119 bits (60), Expect = 8e-24
 Identities = 111/128 (86%)
 Strand = Plus / Minus

                                                                       
Query: 306 cctgagcatctgtaggatggtgaggaacaggttgaggatgtcgaggtaaagttcaacaga 365
           ||||||||| |  ||||||| |||||||||||| |||||||||||||| ||  |||| ||
Sbjct: 908 cctgagcatgttcaggatggagaggaacaggttcaggatgtcgaggtacagcccaaccga 849

                                                                       
Query: 366 agcccagatgtactcgtcataagtgtggcgctttatcaagttctcagtgtcgtagacgat 425
            ||||||||||||||||| || ||||||||||| |||| |||||| |||||||| | |||
Sbjct: 848 cgcccagatgtactcgtcgtaggtgtggcgcttgatcaggttctcggtgtcgtacaggat 789

                   
Query: 426 gaagcctg 433
           ||||||||
Sbjct: 788 gaagcctg 781
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>ref|XM_367013.1| Magnaporthe grisea 70-15 chromosome VII hypothetical protein
           (MG03089.4) partial mRNA
          Length = 849

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 319 aggatggtgaggaacaggttgaggatgtcgaggta 353
           ||||||| |||||||||||||| ||||||||||||
Sbjct: 818 aggatggcgaggaacaggttgatgatgtcgaggta 784
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>gb|AC162030.8| Medicago truncatula clone mth2-178b21, complete sequence
          Length = 85986

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 78/95 (82%)
 Strand = Plus / Plus

                                                                         
Query: 328   aggaacaggttgaggatgtcgaggtaaagttcaacagaagcccagatgtactcgtcataa 387
             ||||||||||| || |||||||| |||||    ||||| ||||  ||||| || ||||||
Sbjct: 71398 aggaacaggttcagaatgtcgagataaagagtgacagaggccccaatgtattcatcataa 71457

                                                
Query: 388   gtgtggcgctttatcaagttctcagtgtcgtagac 422
             || |||||||| ||||  || ||||||||||||||
Sbjct: 71458 gtatggcgcttgatcagattgtcagtgtcgtagac 71492
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>ref|XM_748615.1| Aspergillus fumigatus Af293 hypothetical protein (Afu5g09310)
           partial mRNA
          Length = 846

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 328 aggaacaggttgaggatgtcgaggtaaag 356
           |||||||||||||||||||| ||||||||
Sbjct: 773 aggaacaggttgaggatgtccaggtaaag 745
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>emb|AJ879936.2| Capsicum chinense mRNA for putative receptor associated protein
           (ORF1)
          Length = 1037

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 366 agcccagatgtactcgtcataagtgtggcgctt 398
           ||||||||||||||| |||||||||| ||||||
Sbjct: 756 agcccagatgtactcatcataagtgtagcgctt 724
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>ref|NM_116196.1| Arabidopsis thaliana glutamate binding AT3G63310 mRNA, complete cds
          Length = 720

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 360 aacagaagcccagatgtactcgtcataagtgtggcgctttatcaagtt 407
           ||||| ||||||||||||||||||||| | ||| | ||| ||||||||
Sbjct: 651 aacagcagcccagatgtactcgtcataggagtgcctcttgatcaagtt 604
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>gb|BT020236.1| Arabidopsis thaliana At3g63310 gene, complete cds
          Length = 892

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 360 aacagaagcccagatgtactcgtcataagtgtggcgctttatcaagtt 407
           ||||| ||||||||||||||||||||| | ||| | ||| ||||||||
Sbjct: 741 aacagcagcccagatgtactcgtcataggagtgcctcttgatcaagtt 694
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>emb|AL163818.1|ATMAA21 Arabidopsis thaliana DNA chromosome 3, P1 clone MAA21 (ESSA project)
          Length = 79153

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                             
Query: 360   aacagaagcccagatgtactcgtcataagtgtggcgctttatcaagtt 407
             ||||| ||||||||||||||||||||| | ||| | ||| ||||||||
Sbjct: 10307 aacagcagcccagatgtactcgtcataggagtgcctcttgatcaagtt 10354
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>emb|AL138648.2|ATF16M2 Arabidopsis thaliana DNA chromosome 3, BAC clone F16M2
          Length = 75106

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                             
Query: 360   aacagaagcccagatgtactcgtcataagtgtggcgctttatcaagtt 407
             ||||| ||||||||||||||||||||| | ||| | ||| ||||||||
Sbjct: 55690 aacagcagcccagatgtactcgtcataggagtgcctcttgatcaagtt 55737
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>gb|BT021132.1| Arabidopsis thaliana At3g63310 gene, complete cds
          Length = 720

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 360 aacagaagcccagatgtactcgtcataagtgtggcgctttatcaagtt 407
           ||||| ||||||||||||||||||||| | ||| | ||| ||||||||
Sbjct: 651 aacagcagcccagatgtactcgtcataggagtgcctcttgatcaagtt 604
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>emb|BX470168.7| Zebrafish DNA sequence from clone CH211-288L20 in linkage group 6,
              complete sequence
          Length = 148605

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 156    ggcctcatctctggatgatggca 178
              |||||||||||||||||||||||
Sbjct: 134372 ggcctcatctctggatgatggca 134350
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>emb|BX322791.7| Zebrafish DNA sequence from clone RP71-55E12, complete sequence
          Length = 127643

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 156    ggcctcatctctggatgatggca 178
              |||||||||||||||||||||||
Sbjct: 113305 ggcctcatctctggatgatggca 113283
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>emb|BX825703.1|CNS0A67U Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL57ZF05 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 998

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 360 aacagaagcccagatgtactcgtcata 386
           ||||| |||||||||||||||||||||
Sbjct: 769 aacagcagcccagatgtactcgtcata 743
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>gb|BT014369.1| Lycopersicon esculentum clone 133657R, mRNA sequence
          Length = 1241

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 361 acagaagcccagatgtactcgtcataagtgtggcgctt 398
           |||| ||||||||||||||| || ||||||| ||||||
Sbjct: 680 acagcagcccagatgtactcatcgtaagtgtagcgctt 643
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>gb|BT014225.1| Lycopersicon esculentum clone 133420R, mRNA sequence
          Length = 1133

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 366 agcccagatgtactcgtcataagtgt 391
           ||||||||||||||| ||||||||||
Sbjct: 729 agcccagatgtactcatcataagtgt 704
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>gb|AC159332.11| Mus musculus 6 BAC RP23-413D8 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 208808

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 149    gtactttggcctcatctctgga 170
              ||||||||||||||||||||||
Sbjct: 115436 gtactttggcctcatctctgga 115415
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>emb|CR388214.5| Zebrafish DNA sequence from clone CH211-269E4 in linkage group 21,
             complete sequence
          Length = 138978

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 79    tcactgattgtttgcagtttaa 100
             ||||||||||||||||||||||
Sbjct: 29900 tcactgattgtttgcagtttaa 29921
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>ref|XM_476832.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1205

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                       
Query: 367 gcccagatgtactcgtcataagtgtggcgctttatcaagttctcagtgtcgtagacgatg 426
           ||||||| ||||| ||| || |||| |||||| || | ||| || |||||||||||||||
Sbjct: 822 gcccagacgtactggtcgtaggtgtagcgcttgatgatgttgtccgtgtcgtagacgatg 763

                
Query: 427 aagcc 431
            ||||
Sbjct: 762 tagcc 758
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>emb|AL954324.10| Zebrafish DNA sequence from clone DKEY-35P13 in linkage group 17,
             complete sequence
          Length = 69320

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 79    tcactgattgtttgcagtttaacaa 103
             ||||||||||||||||| |||||||
Sbjct: 60982 tcactgattgtttgcagattaacaa 60958
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>ref|XM_389598.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG09422.1)
           partial mRNA
          Length = 831

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 328 aggaacaggttgaggatgtcgaggtaaag 356
           ||||| ||||||| |||||||||||||||
Sbjct: 791 aggaagaggttgatgatgtcgaggtaaag 763
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>emb|BX324123.4| Zebrafish DNA sequence from clone DKEY-106L3 in linkage group 10,
             complete sequence
          Length = 158061

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 78    atcactgattgtttgcagtttaaca 102
             |||||||||||||| ||||||||||
Sbjct: 69405 atcactgattgtttacagtttaaca 69381
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>gb|DQ397838.1| Cenarchaeum symbiosum clone C03H05, complete sequence
          Length = 39721

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 345   gtcgaggtaaagttcaacaga 365
             |||||||||||||||||||||
Sbjct: 32776 gtcgaggtaaagttcaacaga 32796
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>dbj|AB194635.1| Leek yellow stripe virus gene for coat protein, partial cds,
           isolate: Korea:Import.#2
          Length = 864

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 320 ggatggtgaggaacaggttga 340
           |||||||||||||||||||||
Sbjct: 468 ggatggtgaggaacaggttga 488
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>dbj|AB194634.1| Leek yellow stripe virus gene for coat protein, partial cds,
           isolate: Korea:Import.#1
          Length = 864

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 320 ggatggtgaggaacaggttga 340
           |||||||||||||||||||||
Sbjct: 468 ggatggtgaggaacaggttga 488
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                           
Query: 367     gcccagatgtactcgtcataagtgtggcgctttatcaagttctcagtgtcgtagacgatg 426
               ||||||| ||||| ||| || |||| |||||| || | ||| || |||||||||||||||
Sbjct: 4121765 gcccagacgtactggtcgtaggtgtagcgcttgatgatgttgtccgtgtcgtagacgatg 4121824

                    
Query: 427     aagcc 431
                ||||
Sbjct: 4121825 tagcc 4121829
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>dbj|AP003826.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OJ1361_E02
          Length = 100168

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                        
Query: 367  gcccagatgtactcgtcataagtgtggcgctttatcaagttctcagtgtcgtagacgatg 426
            ||||||| ||||| ||| || |||| |||||| || | ||| || |||||||||||||||
Sbjct: 5387 gcccagacgtactggtcgtaggtgtagcgcttgatgatgttgtccgtgtcgtagacgatg 5446

                 
Query: 427  aagcc 431
             ||||
Sbjct: 5447 tagcc 5451
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>dbj|AP004307.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0534H07
          Length = 144689

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                          
Query: 367    gcccagatgtactcgtcataagtgtggcgctttatcaagttctcagtgtcgtagacgatg 426
              ||||||| ||||| ||| || |||| |||||| || | ||| || |||||||||||||||
Sbjct: 114623 gcccagacgtactggtcgtaggtgtagcgcttgatgatgttgtccgtgtcgtagacgatg 114682

                   
Query: 427    aagcc 431
               ||||
Sbjct: 114683 tagcc 114687
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>dbj|AK073781.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068H10, full
           insert sequence
          Length = 1203

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                       
Query: 367 gcccagatgtactcgtcataagtgtggcgctttatcaagttctcagtgtcgtagacgatg 426
           ||||||| ||||| ||| || |||| |||||| || | ||| || |||||||||||||||
Sbjct: 820 gcccagacgtactggtcgtaggtgtagcgcttgatgatgttgtccgtgtcgtagacgatg 761

                
Query: 427 aagcc 431
            ||||
Sbjct: 760 tagcc 756
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>gb|AC007156.2|AC007156 Homo sapiens chromosome 18, clone hRPK.419_J_16, complete sequence
          Length = 203591

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 155    tggcctcatctctggatgatg 175
              |||||||||||||||||||||
Sbjct: 154447 tggcctcatctctggatgatg 154427
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>dbj|AP005271.4| Homo sapiens genomic DNA, chromosome 18 clone:RP11-752I5, complete
              sequence
          Length = 200108

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 155    tggcctcatctctggatgatg 175
              |||||||||||||||||||||
Sbjct: 116968 tggcctcatctctggatgatg 116988
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>gb|AC138769.4| Mus musculus chromosome 18 clone RP23-235B1, complete sequence
          Length = 189897

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 233    taaaggttggacatatgacc 252
              ||||||||||||||||||||
Sbjct: 143135 taaaggttggacatatgacc 143154
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>emb|AL672211.7| Zebrafish DNA sequence from clone BUSM1-6A2 in linkage group 11
             Contains a novel gene similar to OGFR, the fez gene for
             forebrain embryonic zinc-finger protein, part of a novel
             gene for a protein similar to Ca2+ dependent activator and
             four CpG islands, complete sequence
          Length = 80828

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 79    tcactgattgtttgcagtttaaca 102
             ||||||||||||| ||||||||||
Sbjct: 46648 tcactgattgtttacagtttaaca 46625
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>emb|CR450720.5| Zebrafish DNA sequence from clone DKEYP-51F11 in linkage group 2,
             complete sequence
          Length = 200950

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 79    tcactgattgtttgcagtttaaca 102
             ||||||||||||| ||||||||||
Sbjct: 81673 tcactgattgtttacagtttaaca 81696
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>gb|AF097907.1| Rana catesbeiana myosin heavy chain (MHC-4) mRNA, partial cds
          Length = 2584

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 319 aggatggtgaggaacaggttgagg 342
           |||||| |||||||||||||||||
Sbjct: 867 aggatgctgaggaacaggttgagg 890
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>gb|DQ397875.1| Cenarchaeum symbiosum clone C07F02, complete sequence
          Length = 41724

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 345 gtcgaggtaaagttcaacag 364
           ||||||||||||||||||||
Sbjct: 674 gtcgaggtaaagttcaacag 693
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>gb|DQ397873.1| Cenarchaeum symbiosum clone C13A11, complete sequence
          Length = 40499

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 345   gtcgaggtaaagttcaacag 364
             ||||||||||||||||||||
Sbjct: 33807 gtcgaggtaaagttcaacag 33788
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>gb|DQ397858.1| Cenarchaeum symbiosum clone C05G02, complete sequence
          Length = 39265

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 345  gtcgaggtaaagttcaacag 364
            ||||||||||||||||||||
Sbjct: 8802 gtcgaggtaaagttcaacag 8783
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>gb|DQ397630.1| Cenarchaeum symbiosum clone C01C08, complete sequence
          Length = 44451

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 345   gtcgaggtaaagttcaacag 364
             ||||||||||||||||||||
Sbjct: 41025 gtcgaggtaaagttcaacag 41006
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>gb|DQ060521.1| Bean yellow mosaic virus polyprotein mRNA, partial cds
          Length = 1630

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 320  ggatggtgaggaacaggttg 339
            ||||||||||||||||||||
Sbjct: 1062 ggatggtgaggaacaggttg 1081
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>emb|BX276115.11| Zebrafish DNA sequence from clone DKEY-274M17 in linkage group 11,
              complete sequence
          Length = 175216

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 79     tcactgattgtttgcagtttaaca 102
              ||||||||||||| ||||||||||
Sbjct: 169422 tcactgattgtttacagtttaaca 169445
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>emb|BX465842.5| Zebrafish DNA sequence from clone DKEY-164P3 in linkage group 3, complete
              sequence
          Length = 194224

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 79     tcactgattgtttgcagtttaaca 102
              |||||||||||||||| |||||||
Sbjct: 182372 tcactgattgtttgcaatttaaca 182395
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>gb|AC026736.4|AC026736 Homo sapiens chromosome 5 clone CTD-2350M8, complete sequence
          Length = 108661

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 138   acatattggttgtactttgg 157
             ||||||||||||||||||||
Sbjct: 99455 acatattggttgtactttgg 99474
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>emb|BX957241.13| Zebrafish DNA sequence from clone CH211-197N10 in linkage group 19,
              complete sequence
          Length = 199001

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 79     tcactgattgtttgcagtttaaca 102
              ||||||||||||| ||||||||||
Sbjct: 161444 tcactgattgtttacagtttaaca 161421
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>emb|BX276097.12| Zebrafish DNA sequence from clone DKEY-97C6 in linkage group 20,
             complete sequence
          Length = 128871

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 79    tcactgattgtttgcagtttaaca 102
             ||||||||||||| ||||||||||
Sbjct: 89708 tcactgattgtttacagtttaaca 89731
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>emb|AL954739.9| Zebrafish DNA sequence from clone CH211-192K9 in linkage group 20,
             complete sequence
          Length = 154604

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 79    tcactgattgtttgcagtttaaca 102
             ||||||||||||| ||||||||||
Sbjct: 17984 tcactgattgtttacagtttaaca 18007
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>emb|BX004994.6| Zebrafish DNA sequence from clone DKEY-24J15 in linkage group 22,
             complete sequence
          Length = 211945

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 79    tcactgattgtttgcagtttaaca 102
             ||||||||||||| ||||||||||
Sbjct: 73616 tcactgattgtttacagtttaaca 73639
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>emb|BX001024.7| Zebrafish DNA sequence from clone CH211-42I24, complete sequence
          Length = 169194

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 79   tcactgattgtttgcagtttaaca 102
            ||||||||||| ||||||||||||
Sbjct: 2555 tcactgattgtgtgcagtttaaca 2578


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,737,867
Number of Sequences: 3902068
Number of extensions: 2737867
Number of successful extensions: 57700
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 57589
Number of HSP's gapped (non-prelim): 110
length of query: 433
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 411
effective length of database: 17,147,199,772
effective search space: 7047499106292
effective search space used: 7047499106292
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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