ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd26l05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1YP74_CAEEL (Q09221) Hypothetical protein B0228.4 28 5.1

>YP74_CAEEL (Q09221) Hypothetical protein B0228.4|
          Length = 1633

 Score = 28.5 bits (62), Expect = 5.1
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = +1

Query: 91  SGGRTHSHDTYHHH 132
           SGGRTHSH+ Y  H
Sbjct: 392 SGGRTHSHEEYRRH 405


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,135,501
Number of Sequences: 219361
Number of extensions: 238591
Number of successful extensions: 548
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 545
length of database: 80,573,946
effective HSP length: 39
effective length of database: 72,018,867
effective search space used: 1728452808
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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