ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd26k23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_190836.1| Oryza sativa (japonica cultivar-group), predic... 131 3e-27
2dbj|AK101857.1| Oryza sativa (japonica cultivar-group) cDNA clon... 131 3e-27
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 121 3e-24
4dbj|AP003345.3| Oryza sativa (japonica cultivar-group) genomic D... 121 3e-24
5gb|AY110805.1| Zea mays CL31502_1 mRNA sequence 68 4e-08
6gb|AE017261.1| Picrophilus torridus DSM 9790, complete genome 42 2.2
7gb|AC145959.3| Gallus gallus chromosome UNK clone CH261-17M10, c... 42 2.2
8emb|AL731735.14| Mouse DNA sequence from clone RP23-139P21 on ch... 42 2.2
9ref|XM_476313.1| Oryza sativa (japonica cultivar-group), predic... 40 8.6
10ref|XM_628961.1| Dictyostelium discoideum putative protein kinas... 40 8.6
11gb|AC016792.5| Drosophila melanogaster clone BACR26A02, complete... 40 8.6
12gb|AC114409.17| Mus musculus chromosome 5, clone RP23-148F6, com... 40 8.6
13gb|AC147365.4| Medicago truncatula clone mth2-10f9, complete seq... 40 8.6
14emb|AL831732.18| Human DNA sequence from clone RP11-396L10 on ch... 40 8.6
15emb|AL357078.35| Human DNA sequence from clone RP4-535B20 on chr... 40 8.6
16emb|Z50152.1|DMTRXIII D.melanogaster DNA for trxI and trxII genes 40 8.6
17gb|AC092709.2| Homo sapiens chromosome 8, clone RP11-509P12, com... 40 8.6
18ref|NM_142095.2| Drosophila melanogaster CG12207-RB, transcript ... 40 8.6
19gb|AC090569.4| Homo sapiens chromosome 17, clone RP11-269M11, co... 40 8.6
20gb|AC027043.7| Homo sapiens chromosome 8, clone RP11-769H18, com... 40 8.6
21gb|AC084257.2| Homo sapiens chromosome 8, clone RP1-164F9, compl... 40 8.6
22dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
23gb|AC087433.4|AC087433 Homo sapiens chromosome 15 clone RP11-101... 40 8.6
24gb|AC007904.6|AC007904 Drosophila melanogaster, chromosome 3R, r... 40 8.6
25gb|AC154592.2| Mus musculus BAC clone RP23-249J17 from chromosom... 40 8.6
26gb|AC079154.5| Homo sapiens BAC clone RP11-314E14 from 2, comple... 40 8.6
27gb|AC018880.6| Homo sapiens BAC clone RP11-336P15 from 2, comple... 40 8.6
28dbj|AP003019.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
29dbj|AB046473.2| Eurypharynx pelecanoides mitochondrial DNA, comp... 40 8.6
30dbj|AK066933.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.6
31gb|AE003704.3| Drosophila melanogaster chromosome 3R, section 42... 40 8.6
32gb|U23446.1|DMU23446 Drosophila melanogaster trithorax gene, reg... 40 8.6
33dbj|AB012766.1| Oryza sativa gene for ovp2, complete cds 40 8.6
34dbj|D16387.1| Asterina pectinifera mitochondrial DNA, complete g... 40 8.6
35dbj|D45384.1| Oryza sativa mRNA for vacuolar H+-pyrophosphatase,... 40 8.6 
>ref|NM_190836.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2862

 Score =  131 bits (66), Expect = 3e-27
 Identities = 153/182 (84%)
 Strand = Plus / Minus

                                                                        
Query: 452  ctatcttctactaaatattgaccgacactgttatcatcggaactatttgggacttcagac 511
            ||||||||||||||| ||||||| | ||  |||||||| |  ||| ||||| ||||||||
Sbjct: 2717 ctatcttctactaaacattgaccaaaaccattatcatcagtgctaattgggccttcagac 2658

                                                                        
Query: 512  atgcaatccaaagaactacaactgcttctggaagagagtctaccatctgctgaaaatcca 571
            ||||| |||||||| ||| ||||||||||| | ||||||||||| ||  |||||||||| 
Sbjct: 2657 atgcagtccaaagagctagaactgcttctgcaggagagtctaccgtcctctgaaaatccg 2598

                                                                        
Query: 572  gacttatgtcgctgcagaaacccacttctgttactatcaggtgtgttcacccttgtctgt 631
            ||||| || ||||| || || |||  | ||||||||||||||||| ||||||||| ||||
Sbjct: 2597 gacttttgacgctgaagcaatccatatttgttactatcaggtgtgctcacccttgactgt 2538

              
Query: 632  tg 633
            ||
Sbjct: 2537 tg 2536



 Score =  107 bits (54), Expect = 4e-20
 Identities = 84/94 (89%)
 Strand = Plus / Minus

                                                                        
Query: 311  gggagtagctcactatcttcacaatcgtctttgctatttacaactccgagctgggcctcc 370
            |||||| |||| || ||||||||||| |||||| ||||||||| ||||||||||||||| 
Sbjct: 2852 gggagttgctctctgtcttcacaatcctctttgttatttacaaatccgagctgggcctct 2793

                                              
Query: 371  gtgttcaggctctcagtgttatttacaagctcgg 404
            ||||| ||||||| ||| ||||||||||||||||
Sbjct: 2792 gtgttaaggctctgagtattatttacaagctcgg 2759
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>dbj|AK101857.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069O17, full
            insert sequence
          Length = 3412

 Score =  131 bits (66), Expect = 3e-27
 Identities = 153/182 (84%)
 Strand = Plus / Minus

                                                                        
Query: 452  ctatcttctactaaatattgaccgacactgttatcatcggaactatttgggacttcagac 511
            ||||||||||||||| ||||||| | ||  |||||||| |  ||| ||||| ||||||||
Sbjct: 2966 ctatcttctactaaacattgaccaaaaccattatcatcagtgctaattgggccttcagac 2907

                                                                        
Query: 512  atgcaatccaaagaactacaactgcttctggaagagagtctaccatctgctgaaaatcca 571
            ||||| |||||||| ||| ||||||||||| | ||||||||||| ||  |||||||||| 
Sbjct: 2906 atgcagtccaaagagctagaactgcttctgcaggagagtctaccgtcctctgaaaatccg 2847

                                                                        
Query: 572  gacttatgtcgctgcagaaacccacttctgttactatcaggtgtgttcacccttgtctgt 631
            ||||| || ||||| || || |||  | ||||||||||||||||| ||||||||| ||||
Sbjct: 2846 gacttttgacgctgaagcaatccatatttgttactatcaggtgtgctcacccttgactgt 2787

              
Query: 632  tg 633
            ||
Sbjct: 2786 tg 2785



 Score =  117 bits (59), Expect = 5e-23
 Identities = 216/262 (82%), Gaps = 11/262 (4%)
 Strand = Plus / Minus

                                                                        
Query: 1    ttattgaaaatggaattaacaatnctcgttatgtacaagttctt--gtaagattgaaacc 58
            |||||||||||| ||| |||||| || ||||||| || ||||||  ||||||| ||||||
Sbjct: 3396 ttattgaaaatgcaatgaacaat-cttgttatgtgcacgttcttttgtaagatggaaacc 3338

                                                                        
Query: 59   ccaacttcacatcactagggcttccatacacgcagggccataattcgacctccctttcat 118
            | ||||||||| ||| |  ||| |||||| |   ||||| |||||||||||||| |||||
Sbjct: 3337 c-aacttcacagcaccaccgctcccatacccattgggccttaattcgacctccccttcat 3279

                                                                        
Query: 119  cctttcctcagtaaacttatcatgaatgcttataaatagtggagtactagagaagagagg 178
              |||  |||||||| ||||||||||||||||||||||| |     ||| ||||||||||
Sbjct: 3278 ttttttatcagtaaatttatcatgaatgcttataaatagag-----ctatagaagagagg 3224

                                                                        
Query: 179  ccaagaactccggatggagaaatgaaagaattaacagttacacacgcacgggaaagactt 238
             |||||||||| |  ||||||||||||||| || ||| |||||||||||    |||||||
Sbjct: 3223 tcaagaactccaggaggagaaatgaaagaa-tagcagctacacacgcacaatgaagactt 3165

                                  
Query: 239  ggcgattcaaggagctcctcca 260
             |||||||||| ||||||||||
Sbjct: 3164 -gcgattcaagaagctcctcca 3144



 Score =  107 bits (54), Expect = 4e-20
 Identities = 84/94 (89%)
 Strand = Plus / Minus

                                                                        
Query: 311  gggagtagctcactatcttcacaatcgtctttgctatttacaactccgagctgggcctcc 370
            |||||| |||| || ||||||||||| |||||| ||||||||| ||||||||||||||| 
Sbjct: 3101 gggagttgctctctgtcttcacaatcctctttgttatttacaaatccgagctgggcctct 3042

                                              
Query: 371  gtgttcaggctctcagtgttatttacaagctcgg 404
            ||||| ||||||| ||| ||||||||||||||||
Sbjct: 3041 gtgttaaggctctgagtattatttacaagctcgg 3008
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  121 bits (61), Expect = 3e-24
 Identities = 145/173 (83%)
 Strand = Plus / Plus

                                                                            
Query: 452      ctatcttctactaaatattgaccgacactgttatcatcggaactatttgggacttcagac 511
                ||||||||||||||| ||||||| | ||  |||||||| |  ||| ||||| ||||||||
Sbjct: 33362955 ctatcttctactaaacattgaccaaaaccattatcatcagtgctaattgggccttcagac 33363014

                                                                            
Query: 512      atgcaatccaaagaactacaactgcttctggaagagagtctaccatctgctgaaaatcca 571
                ||||| |||||||| ||| ||||||||||| | ||||||||||| ||  |||||||||| 
Sbjct: 33363015 atgcagtccaaagagctagaactgcttctgcaggagagtctaccgtcctctgaaaatccg 33363074

                                                                     
Query: 572      gacttatgtcgctgcagaaacccacttctgttactatcaggtgtgttcaccct 624
                ||||| || ||||| || || |||  | ||||||||||||||||| |||||||
Sbjct: 33363075 gacttttgacgctgaagcaatccatatttgttactatcaggtgtgctcaccct 33363127



 Score =  117 bits (59), Expect = 5e-23
 Identities = 216/262 (82%), Gaps = 11/262 (4%)
 Strand = Plus / Plus

                                                                            
Query: 1        ttattgaaaatggaattaacaatnctcgttatgtacaagttctt--gtaagattgaaacc 58
                |||||||||||| ||| |||||| || ||||||| || ||||||  ||||||| ||||||
Sbjct: 33362259 ttattgaaaatgcaatgaacaat-cttgttatgtgcacgttcttttgtaagatggaaacc 33362317

                                                                            
Query: 59       ccaacttcacatcactagggcttccatacacgcagggccataattcgacctccctttcat 118
                | ||||||||| ||| |  ||| |||||| |   ||||| |||||||||||||| |||||
Sbjct: 33362318 c-aacttcacagcaccaccgctcccatacccattgggccttaattcgacctccccttcat 33362376

                                                                            
Query: 119      cctttcctcagtaaacttatcatgaatgcttataaatagtggagtactagagaagagagg 178
                  |||  |||||||| ||||||||||||||||||||||| |     ||| ||||||||||
Sbjct: 33362377 ttttttatcagtaaatttatcatgaatgcttataaatagag-----ctatagaagagagg 33362431

                                                                            
Query: 179      ccaagaactccggatggagaaatgaaagaattaacagttacacacgcacgggaaagactt 238
                 |||||||||| |  ||||||||||||||| || ||| |||||||||||    |||||||
Sbjct: 33362432 tcaagaactccaggaggagaaatgaaagaa-tagcagctacacacgcacaatgaagactt 33362490

                                      
Query: 239      ggcgattcaaggagctcctcca 260
                 |||||||||| ||||||||||
Sbjct: 33362491 -gcgattcaagaagctcctcca 33362511



 Score =  107 bits (54), Expect = 4e-20
 Identities = 84/94 (89%)
 Strand = Plus / Plus

                                                                            
Query: 311      gggagtagctcactatcttcacaatcgtctttgctatttacaactccgagctgggcctcc 370
                |||||| |||| || ||||||||||| |||||| ||||||||| ||||||||||||||| 
Sbjct: 33362820 gggagttgctctctgtcttcacaatcctctttgttatttacaaatccgagctgggcctct 33362879

                                                  
Query: 371      gtgttcaggctctcagtgttatttacaagctcgg 404
                ||||| ||||||| ||| ||||||||||||||||
Sbjct: 33362880 gtgttaaggctctgagtattatttacaagctcgg 33362913
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>dbj|AP003345.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0415A04
          Length = 160669

 Score =  121 bits (61), Expect = 3e-24
 Identities = 145/173 (83%)
 Strand = Plus / Plus

                                                                         
Query: 452   ctatcttctactaaatattgaccgacactgttatcatcggaactatttgggacttcagac 511
             ||||||||||||||| ||||||| | ||  |||||||| |  ||| ||||| ||||||||
Sbjct: 39121 ctatcttctactaaacattgaccaaaaccattatcatcagtgctaattgggccttcagac 39180

                                                                         
Query: 512   atgcaatccaaagaactacaactgcttctggaagagagtctaccatctgctgaaaatcca 571
             ||||| |||||||| ||| ||||||||||| | ||||||||||| ||  |||||||||| 
Sbjct: 39181 atgcagtccaaagagctagaactgcttctgcaggagagtctaccgtcctctgaaaatccg 39240

                                                                  
Query: 572   gacttatgtcgctgcagaaacccacttctgttactatcaggtgtgttcaccct 624
             ||||| || ||||| || || |||  | ||||||||||||||||| |||||||
Sbjct: 39241 gacttttgacgctgaagcaatccatatttgttactatcaggtgtgctcaccct 39293



 Score =  117 bits (59), Expect = 5e-23
 Identities = 216/262 (82%), Gaps = 11/262 (4%)
 Strand = Plus / Plus

                                                                         
Query: 1     ttattgaaaatggaattaacaatnctcgttatgtacaagttctt--gtaagattgaaacc 58
             |||||||||||| ||| |||||| || ||||||| || ||||||  ||||||| ||||||
Sbjct: 38425 ttattgaaaatgcaatgaacaat-cttgttatgtgcacgttcttttgtaagatggaaacc 38483

                                                                         
Query: 59    ccaacttcacatcactagggcttccatacacgcagggccataattcgacctccctttcat 118
             | ||||||||| ||| |  ||| |||||| |   ||||| |||||||||||||| |||||
Sbjct: 38484 c-aacttcacagcaccaccgctcccatacccattgggccttaattcgacctccccttcat 38542

                                                                         
Query: 119   cctttcctcagtaaacttatcatgaatgcttataaatagtggagtactagagaagagagg 178
               |||  |||||||| ||||||||||||||||||||||| |     ||| ||||||||||
Sbjct: 38543 ttttttatcagtaaatttatcatgaatgcttataaatagag-----ctatagaagagagg 38597

                                                                         
Query: 179   ccaagaactccggatggagaaatgaaagaattaacagttacacacgcacgggaaagactt 238
              |||||||||| |  ||||||||||||||| || ||| |||||||||||    |||||||
Sbjct: 38598 tcaagaactccaggaggagaaatgaaagaa-tagcagctacacacgcacaatgaagactt 38656

                                   
Query: 239   ggcgattcaaggagctcctcca 260
              |||||||||| ||||||||||
Sbjct: 38657 -gcgattcaagaagctcctcca 38677



 Score =  107 bits (54), Expect = 4e-20
 Identities = 84/94 (89%)
 Strand = Plus / Plus

                                                                         
Query: 311   gggagtagctcactatcttcacaatcgtctttgctatttacaactccgagctgggcctcc 370
             |||||| |||| || ||||||||||| |||||| ||||||||| ||||||||||||||| 
Sbjct: 38986 gggagttgctctctgtcttcacaatcctctttgttatttacaaatccgagctgggcctct 39045

                                               
Query: 371   gtgttcaggctctcagtgttatttacaagctcgg 404
             ||||| ||||||| ||| ||||||||||||||||
Sbjct: 39046 gtgttaaggctctgagtattatttacaagctcgg 39079
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>gb|AY110805.1| Zea mays CL31502_1 mRNA sequence
          Length = 923

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 55/62 (88%)
 Strand = Plus / Plus

                                                                       
Query: 344 ctatttacaactccgagctgggcctccgtgttcaggctctcagtgttatttacaagctcg 403
           |||||||||| ||||||||||||||| |  || |||||| |||| |||||||||||||||
Sbjct: 290 ctatttacaaatccgagctgggcctctgacttgaggctcccagtattatttacaagctcg 349

             
Query: 404 gc 405
           ||
Sbjct: 350 gc 351



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 35/38 (92%), Gaps = 2/38 (5%)
 Strand = Plus / Plus

                                                 
Query: 190 ggatggagaaatgaaagaattaacagttacacacgcac 227
           |||||||||||||||||||||  ||| |||||||||||
Sbjct: 147 ggatggagaaatgaaagaatt--cagctacacacgcac 182



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 549 gtctaccatctgctgaaaatccagacttatgtcgctgcag 588
           ||||||||||| ||||||  ||||| || |||||||||||
Sbjct: 489 gtctaccatcttctgaaatcccagatttctgtcgctgcag 528
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>gb|AE017261.1| Picrophilus torridus DSM 9790, complete genome
          Length = 1545895

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 106    acctccctttcatcctttcct 126
              |||||||||||||||||||||
Sbjct: 913306 acctccctttcatcctttcct 913286
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>gb|AC145959.3| Gallus gallus chromosome UNK clone CH261-17M10, complete sequence
          Length = 183075

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 113    tttcatcctttcctcagtaaa 133
              |||||||||||||||||||||
Sbjct: 110594 tttcatcctttcctcagtaaa 110574
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>emb|AL731735.14| Mouse DNA sequence from clone RP23-139P21 on chromosome X, complete
              sequence
          Length = 201223

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 198    aaatgaaagaattaacagtta 218
              |||||||||||||||||||||
Sbjct: 185539 aaatgaaagaattaacagtta 185559
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>ref|XM_476313.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2304

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 257 tccaccaggaccataaccagtgat 280
           ||||||| ||||||||||||||||
Sbjct: 705 tccaccaagaccataaccagtgat 682
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>ref|XM_628961.1| Dictyostelium discoideum putative protein kinase (DDB0229346),
           partial mRNA
          Length = 1188

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 199 aatgaaagaattaacagtta 218
           ||||||||||||||||||||
Sbjct: 240 aatgaaagaattaacagtta 259
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>gb|AC016792.5| Drosophila melanogaster clone BACR26A02, complete sequence
          Length = 164971

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 536    cttctggaagagagtctacc 555
              ||||||||||||||||||||
Sbjct: 150015 cttctggaagagagtctacc 149996
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>gb|AC114409.17| Mus musculus chromosome 5, clone RP23-148F6, complete sequence
          Length = 222692

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 409   gtggttaacgttcaagttcttatt 432
             ||||||| ||||||||||||||||
Sbjct: 84288 gtggttagcgttcaagttcttatt 84311
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>gb|AC147365.4| Medicago truncatula clone mth2-10f9, complete sequence
          Length = 89850

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 132   aacttatcatgaatgcttat 151
             ||||||||||||||||||||
Sbjct: 88973 aacttatcatgaatgcttat 88954
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>emb|AL831732.18| Human DNA sequence from clone RP11-396L10 on chromosome 1, complete
            sequence
          Length = 38529

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 173  gagaggccaagaactccgga 192
            ||||||||||||||||||||
Sbjct: 2829 gagaggccaagaactccgga 2810
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>emb|AL357078.35| Human DNA sequence from clone RP4-535B20 on chromosome 1 Contains part
             of a novel gene, a novel gene, a ribosomal protein S24
             (RPS24) pseudogene, a mitochondrial ribosomal protein S21
             (MRPS21) pseudogene and a CpG island, complete sequence
          Length = 147603

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     ttattgaaaatggaattaac 20
             ||||||||||||||||||||
Sbjct: 22070 ttattgaaaatggaattaac 22051
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>emb|Z50152.1|DMTRXIII D.melanogaster DNA for trxI and trxII genes
          Length = 26618

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 536 cttctggaagagagtctacc 555
           ||||||||||||||||||||
Sbjct: 640 cttctggaagagagtctacc 621
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>gb|AC092709.2| Homo sapiens chromosome 8, clone RP11-509P12, complete sequence
          Length = 178904

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 107  cctccctttcatcctttcct 126
            ||||||||||||||||||||
Sbjct: 4116 cctccctttcatcctttcct 4135
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>ref|NM_142095.2| Drosophila melanogaster CG12207-RB, transcript variant B (CG12207),
           mRNA
          Length = 2312

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 536 cttctggaagagagtctacc 555
           ||||||||||||||||||||
Sbjct: 127 cttctggaagagagtctacc 146
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>gb|AC090569.4| Homo sapiens chromosome 17, clone RP11-269M11, complete sequence
          Length = 169262

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 107   cctccctttcatcctttcct 126
             ||||||||||||||||||||
Sbjct: 86664 cctccctttcatcctttcct 86645
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>gb|AC027043.7| Homo sapiens chromosome 8, clone RP11-769H18, complete sequence
          Length = 155821

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 107    cctccctttcatcctttcct 126
              ||||||||||||||||||||
Sbjct: 118012 cctccctttcatcctttcct 118031
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>gb|AC084257.2| Homo sapiens chromosome 8, clone RP1-164F9, complete sequence
          Length = 97751

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 107   cctccctttcatcctttcct 126
             ||||||||||||||||||||
Sbjct: 72069 cctccctttcatcctttcct 72050
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 257     tccaccaggaccataaccagtgat 280
               ||||||| ||||||||||||||||
Sbjct: 3932554 tccaccaagaccataaccagtgat 3932531
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>gb|AC087433.4|AC087433 Homo sapiens chromosome 15 clone RP11-101J17 and RP11-501G11 map
             15q21.1, complete sequence
          Length = 185145

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 285   tttgataacgtcactgacat 304
             ||||||||||||||||||||
Sbjct: 61851 tttgataacgtcactgacat 61832
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>gb|AC007904.6|AC007904 Drosophila melanogaster, chromosome 3R, region 88B-88B, BAC clone
              BACR01H04, complete sequence
          Length = 190325

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 536    cttctggaagagagtctacc 555
              ||||||||||||||||||||
Sbjct: 169372 cttctggaagagagtctacc 169391
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>gb|AC154592.2| Mus musculus BAC clone RP23-249J17 from chromosome 14, complete
             sequence
          Length = 211647

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 582   gctgcagaaacccacttctg 601
             ||||||||||||||||||||
Sbjct: 78065 gctgcagaaacccacttctg 78046
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>gb|AC079154.5| Homo sapiens BAC clone RP11-314E14 from 2, complete sequence
          Length = 175387

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 164    actagagaagagaggccaagaact 187
              ||||||||||||||| ||||||||
Sbjct: 142667 actagagaagagaggacaagaact 142644
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>gb|AC018880.6| Homo sapiens BAC clone RP11-336P15 from 2, complete sequence
          Length = 127025

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 405   cttggtggttaacgttcaagttcttatt 432
             ||||||||||||| ||||| ||||||||
Sbjct: 84297 cttggtggttaacattcaacttcttatt 84270
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>dbj|AP003019.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0035I03
          Length = 153749

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 257   tccaccaggaccataaccagtgat 280
             ||||||| ||||||||||||||||
Sbjct: 38430 tccaccaagaccataaccagtgat 38407
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>dbj|AB046473.2| Eurypharynx pelecanoides mitochondrial DNA, compete genome
          Length = 18978

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 399   gctcggcttggtggttaacg 418
             ||||||||||||||||||||
Sbjct: 17572 gctcggcttggtggttaacg 17553
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>dbj|AK066933.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091F19, full
           insert sequence
          Length = 2738

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 257 tccaccaggaccataaccagtgat 280
           ||||||| ||||||||||||||||
Sbjct: 814 tccaccaagaccataaccagtgat 791
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>gb|AE003704.3| Drosophila melanogaster chromosome 3R, section 42 of 118 of the
             complete sequence
          Length = 220679

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 536   cttctggaagagagtctacc 555
             ||||||||||||||||||||
Sbjct: 29105 cttctggaagagagtctacc 29124
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>gb|U23446.1|DMU23446 Drosophila melanogaster trithorax gene, regulatory 5' region
          Length = 2927

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 536 cttctggaagagagtctacc 555
           ||||||||||||||||||||
Sbjct: 640 cttctggaagagagtctacc 621
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>dbj|AB012766.1| Oryza sativa gene for ovp2, complete cds
          Length = 5985

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 257  tccaccaggaccataaccagtgat 280
            ||||||| ||||||||||||||||
Sbjct: 3434 tccaccaagaccataaccagtgat 3411
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>dbj|D16387.1| Asterina pectinifera mitochondrial DNA, complete genome
          Length = 16260

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 37   aagttcttgtaagattgaaa 56
            ||||||||||||||||||||
Sbjct: 3906 aagttcttgtaagattgaaa 3887
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>dbj|D45384.1| Oryza sativa mRNA for vacuolar H+-pyrophosphatase, complete cds
          Length = 2710

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 257 tccaccaggaccataaccagtgat 280
           ||||||| ||||||||||||||||
Sbjct: 799 tccaccaagaccataaccagtgat 776


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,425,028
Number of Sequences: 3902068
Number of extensions: 5425028
Number of successful extensions: 97441
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 97317
Number of HSP's gapped (non-prelim): 121
length of query: 633
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 610
effective length of database: 17,143,297,704
effective search space: 10457411599440
effective search space used: 10457411599440
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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