ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd26k21
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1REG3B_RAT (P25031) Regenerating islet-derived protein 3 beta pre... 28 8.5

>REG3B_RAT (P25031) Regenerating islet-derived protein 3 beta precursor (Reg|
           III-beta) (Pancreatitis-associated protein 1) (Peptide
           23) (REG-2)
          Length = 175

 Score = 27.7 bits (60), Expect = 8.5
 Identities = 13/47 (27%), Positives = 22/47 (46%)
 Frame = -2

Query: 208 IACRRRQQGHRGCSLRFGEQQNSLRLNKSGGLIYRSSWCA*SSPLIG 68
           +AC++R +GH    L   E      + K+ G  Y+ +W     P +G
Sbjct: 66  LACQKRPEGHLVSVLNVAEASFLASMVKNTGNSYQYTWIGLHDPTLG 112


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,510,221
Number of Sequences: 219361
Number of extensions: 454096
Number of successful extensions: 944
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 943
length of database: 80,573,946
effective HSP length: 46
effective length of database: 70,483,340
effective search space used: 1691600160
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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