Clone Name | rbasd26k21 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | gb|AE011914.1| Xanthomonas axonopodis pv. citri str. 306, secti... | 42 | 0.68 | 2 | dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... | 42 | 0.68 | 3 | gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome | 40 | 2.7 | 4 | emb|AL672121.10| Mouse DNA sequence from clone RP23-256H2 on chr... | 40 | 2.7 |
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>gb|AE011914.1| Xanthomonas axonopodis pv. citri str. 306, section 292 of 469 of the complete genome Length = 10174 Score = 42.1 bits (21), Expect = 0.68 Identities = 24/25 (96%) Strand = Plus / Minus Query: 177 cggtggccttgctgtcggcgacggc 201 |||||||||||||||||||| |||| Sbjct: 5815 cggtggccttgctgtcggcggcggc 5791
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 42.1 bits (21), Expect = 0.68 Identities = 21/21 (100%) Strand = Plus / Minus Query: 121 ccgatttattcaaccgcagcg 141 ||||||||||||||||||||| Sbjct: 56000 ccgatttattcaaccgcagcg 55980
>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome Length = 2560265 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 atgagcaaccacggtggcct 185 |||||||||||||||||||| Sbjct: 618915 atgagcaaccacggtggcct 618934
>emb|AL672121.10| Mouse DNA sequence from clone RP23-256H2 on chromosome 11, complete sequence Length = 36089 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 cctctctagtacaagctcat 48 |||||||||||||||||||| Sbjct: 17055 cctctctagtacaagctcat 17036 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,189,595 Number of Sequences: 3902068 Number of extensions: 1189595 Number of successful extensions: 70046 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 69995 Number of HSP's gapped (non-prelim): 51 length of query: 212 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 190 effective length of database: 17,147,199,772 effective search space: 3257967956680 effective search space used: 3257967956680 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)