Clone Name	rbasd26k16
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome	1057	0.0
2	ref|XM_481016.1| Oryza sativa (japonica cultivar-group), mRNA	626	e-176
3	ref|XM_481017.1| Oryza sativa (japonica cultivar-group), mRNA	626	e-176
4	gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar N...	626	e-176
5	gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA...	626	e-176
6	gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-1...	626	e-176
7	emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chlor...	626	e-176
8	emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4,...	626	e-176
9	dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...	626	e-176
10	dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...	626	e-176
11	dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic D...	626	e-176
12	dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome	626	e-176
13	ref|XM_479425.1| Oryza sativa (japonica cultivar-group), mRNA	618	e-174
14	dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D...	618	e-174
15	dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...	618	e-174
16	dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic D...	618	e-174
17	dbj|AP003825.3| Oryza sativa (japonica cultivar-group) genomic D...	618	e-174
18	dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic D...	618	e-174
19	dbj|AP005683.2| Oryza sativa (japonica cultivar-group) genomic D...	618	e-174
20	dbj|AK072149.1| Oryza sativa (japonica cultivar-group) cDNA clon...	618	e-174
21	gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome...	613	e-172
22	gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, c...	613	e-172
23	dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D...	613	e-172
24	gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome...	613	e-172
25	emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome	585	e-164
26	gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome	585	e-164
27	emb|Y00329.1|CHZMRP22 Maize chloroplast rpl22 gene for ribosomal...	571	e-159
28	gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast,...	561	e-156
29	dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete ...	561	e-156
30	dbj|AP005675.3| Oryza sativa (japonica cultivar-group) genomic D...	539	e-150
31	dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...	462	e-127
32	gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome...	462	e-127
33	emb|AL831799.3|CNS08CAC Oryza sativa chromosome 12, . BAC OSJNBa...	462	e-127
34	gb|DQ113925.1| Calamagrostis breweri isolate X17 trnH-psbA inter...	202	1e-48
35	gb|DQ113924.1| Calamagrostis breweri isolate RMP0198 trnH-psbA i...	202	1e-48
36	gb|DQ113923.1| Calamagrostis breweri isolate BW8259 trnH-psbA in...	202	1e-48
37	gb|DQ113922.1| Calamagrostis breweri isolate RMP0007 trnH-psbA i...	202	1e-48
38	gb|DQ113921.1| Calamagrostis muiriana isolate B4 trnH-psbA inter...	202	1e-48
39	gb|DQ113920.1| Calamagrostis muiriana isolate B3 trnH-psbA inter...	202	1e-48
40	gb|DQ113919.1| Calamagrostis muiriana isolate B1 trnH-psbA inter...	202	1e-48
41	gb|DQ113918.1| Calamagrostis muiriana isolate A7 trnH-psbA inter...	202	1e-48
42	gb|DQ113917.1| Calamagrostis muiriana isolate A1 trnH-psbA inter...	202	1e-48
43	gb|DQ369760.1| Festuca rubra isolate 3 PsbA (psbA) gene, partial...	202	1e-48
44	gb|DQ369756.1| Festuca arizonica isolate 1 PsbA (psbA) gene, par...	202	1e-48
45	emb|X13327.1|CHSCPSBA Secale cereale chloroplast psbA gene for h...	196	6e-47
46	gb|AY016310.1| Phragmites australis trnH-psbA intergenic spacer,...	196	6e-47
47	gb|AY769149.1| Paspalum vaginatum psbA-trnH intergenic spacer, p...	196	6e-47
48	gb|AY769148.1| Paspalum urvillei psbA-trnH intergenic spacer, pa...	196	6e-47
49	gb|AY769147.1| Paspalum subciliatum psbA-trnH intergenic spacer,...	196	6e-47
50	gb|AY769146.1| Paspalum ramboi psbA-trnH intergenic spacer, part...	196	6e-47
51	gb|AY769141.1| Paspalum minus psbA-trnH intergenic spacer, parti...	196	6e-47
52	gb|AY769139.1| Paspalum lividum psbA-trnH intergenic spacer, par...	196	6e-47
53	gb|AY769138.1| Paspalum lineare psbA-trnH intergenic spacer, par...	196	6e-47
54	gb|AY769137.1| Paspalum juergensii psbA-trnH intergenic spacer, ...	196	6e-47
55	gb|AY769136.1| Paspalum ionanthum psbA-trnH intergenic spacer, p...	196	6e-47
56	gb|AY769135.1| Paspalum intermedium psbA-trnH intergenic spacer,...	196	6e-47
57	gb|AY769134.1| Paspalum flaccidum psbA-trnH intergenic spacer, p...	196	6e-47
58	gb|AY769133.1| Paspalum filifolium psbA-trnH intergenic spacer, ...	196	6e-47
59	gb|AY769132.1| Paspalum equitans psbA-trnH intergenic spacer, pa...	196	6e-47
60	gb|AY769130.1| Paspalum dilatatum psbA-trnH intergenic spacer, p...	196	6e-47
61	gb|AY769128.1| Paspalum dasypleurum psbA-trnH intergenic spacer,...	196	6e-47
62	gb|AY769127.1| Paspalum cromyorhizon psbA-trnH intergenic spacer...	196	6e-47
63	gb|AY769126.1| Paspalum conduplicatum psbA-trnH intergenic space...	196	6e-47
64	gb|AY769124.1| Paspalum almum psbA-trnH intergenic spacer, parti...	196	6e-47
65	gb|AY769123.1| Paspalum acuminatum psbA-trnH intergenic spacer, ...	196	6e-47
66	gb|AY769122.1| Thrasya petrosa psbA-trnH intergenic spacer, part...	196	6e-47
67	gb|AY941127.1| Paspalum quadrifarium psbA-trnH intergenic spacer...	196	6e-47
68	gb|AY941126.1| Paspalum exaltatum psbA-trnH intergenic spacer, p...	196	6e-47
69	gb|AY941125.1| Paspalum quarinii psbA-trnH intergenic spacer, pa...	196	6e-47
70	gb|AY941123.1| Paspalum quadrifarium psbA-trnH intergenic spacer...	196	6e-47
71	gb|AY941122.1| Paspalum rufum psbA-trnH intergenic spacer, parti...	196	6e-47
72	gb|AY941121.1| Paspalum intermedium psbA-trnH intergenic spacer,...	196	6e-47
73	gb|AY941120.1| Paspalum haumanii psbA-trnH intergenic spacer, pa...	196	6e-47
74	gb|DQ006214.1| Chasmanthium latifolium voucher Wells 4431 US Psb...	196	6e-47
75	dbj|AB128634.1| Oryza granulata chloroplast DNA, containing SSR ...	194	2e-46
76	dbj|AB128633.1| Oryza granulata chloroplast DNA, containing SSR ...	194	2e-46
77	gb|AY769145.1| Paspalum pumilum psbA-trnH intergenic spacer, par...	188	1e-44
78	gb|AY769143.1| Paspalum pallens psbA-trnH intergenic spacer, par...	188	1e-44
79	gb|AY769142.1| Paspalum notatum psbA-trnH intergenic spacer, par...	188	1e-44
80	gb|DQ006178.1| Cyperus erythrorhizos voucher Wells 4458 US PsbA ...	188	1e-44
81	dbj|AB128631.1| Oryza ridleyi chloroplast DNA, containing SSR re...	186	6e-44
82	dbj|AB128630.1| Oryza longiglumis chloroplast DNA, containing SS...	186	6e-44
83	dbj|AB128629.1| Oryza ridleyi chloroplast DNA, containing SSR re...	186	6e-44
84	dbj|AB128628.1| Oryza longiglumis chloroplast DNA, containing SS...	186	6e-44
85	gb|DQ369792.1| Festuca occidentalis isolate 17 PsbA (psbA) gene,...	184	2e-43
86	gb|DQ369758.1| Festuca valesiaca isolate 2 PsbA (psbA) gene, par...	184	2e-43
87	gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome	182	9e-43
88	gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mit...	182	9e-43
89	gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion...	182	9e-43
90	gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion...	182	9e-43
91	gb|AY769140.1| Paspalum maculosum psbA-trnH intergenic spacer, p...	182	9e-43
92	gb|AY769131.1| Paspalum ellipticum psbA-trnH intergenic spacer, ...	182	9e-43
93	gb|DQ369762.1| Festuca rubra isolate 4 PsbA (psbA) gene, partial...	182	9e-43
94	emb|Y00141.1|CHZMRP19 Maize chloroplast rps19 gene for ribosomal...	180	4e-42
95	gb|AY941124.1| Axonopus rosengurttii psbA-trnH intergenic spacer...	180	4e-42
96	gb|DQ006213.1| Arthraxon hispidus voucher Wells 5171 US PsbA (ps...	180	4e-42
97	emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4,...	178	1e-41
98	gb|AF527485.1| Chloroplast transformation vector pVSR326, comple...	178	1e-41
99	gb|AC025783.10| Oryza sativa chromosome 10 BAC OSJNBa0001O14 gen...	178	1e-41
100	gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar N...	178	1e-41
101	dbj|AB128665.1| Oryza nivara chloroplast DNA, containing SSR reg...	178	1e-41
102	dbj|AB128664.1| Oryza eichingeri chloroplast DNA, containing SSR...	178	1e-41
103	dbj|AB128663.1| Oryza rhizomatis chloroplast DNA, containing SSR...	178	1e-41
104	dbj|AB128662.1| Oryza alta chloroplast DNA, containing SSR regio...	178	1e-41
105	dbj|AB128661.1| Oryza punctata chloroplast DNA, containing SSR r...	178	1e-41
106	dbj|AB128660.1| Oryza glumipatula chloroplast DNA, containing SS...	178	1e-41
107	dbj|AB128659.1| Oryza glumipatula chloroplast DNA, containing SS...	178	1e-41
108	dbj|AB128658.1| Oryza punctata chloroplast DNA, containing SSR r...	178	1e-41
109	dbj|AB128656.1| Oryza australiensis chloroplast DNA, containing ...	178	1e-41
110	dbj|AB128655.1| Oryza australiensis chloroplast DNA, containing ...	178	1e-41
111	dbj|AB128654.1| Oryza australiensis chloroplast DNA, containing ...	178	1e-41
112	dbj|AB128653.1| Oryza australiensis chloroplast DNA, containing ...	178	1e-41
113	dbj|AB128652.1| Oryza meridionalis chloroplast DNA, containing S...	178	1e-41
114	dbj|AB128651.1| Oryza meridionalis chloroplast DNA, containing S...	178	1e-41
115	dbj|AB128650.1| Oryza punctata chloroplast DNA, containing SSR r...	178	1e-41
116	dbj|AB128649.1| Oryza glumipatula chloroplast DNA, containing SS...	178	1e-41
117	dbj|AB128648.1| Oryza barthii chloroplast DNA, containing SSR re...	178	1e-41
118	dbj|AB128647.1| Oryza rufipogon chloroplast DNA, containing SSR ...	178	1e-41
119	dbj|AB128646.1| Oryza longistaminata chloroplast DNA, containing...	178	1e-41
120	dbj|AB128645.1| Oryza glumipatula chloroplast DNA, containing SS...	178	1e-41
121	dbj|AB128644.1| Oryza rufipogon chloroplast DNA, containing SSR ...	178	1e-41
122	dbj|AB128643.1| Oryza longistaminata chloroplast DNA, containing...	178	1e-41
123	dbj|AB128642.1| Oryza rufipogon chloroplast DNA, containing SSR ...	178	1e-41
124	dbj|AB128641.1| Oryza longistaminata chloroplast DNA, containing...	178	1e-41
125	dbj|AB128640.1| Oryza sativa chloroplast DNA, containing SSR reg...	178	1e-41
126	dbj|AB128639.1| Oryza rufipogon chloroplast DNA, containing SSR ...	178	1e-41
127	dbj|AB128638.1| Oryza glaberrima chloroplast DNA, containing SSR...	178	1e-41
128	dbj|AB128637.1| Leersia tisserantii chloroplast DNA, containing ...	178	1e-41
129	dbj|AB128636.1| Leersia tisserantii chloroplast DNA, containing ...	178	1e-41
130	dbj|AB128635.1| Oryza latifolia chloroplast DNA, containing SSR ...	178	1e-41
131	dbj|AB128632.1| Oryza australiensis chloroplast DNA, containing ...	178	1e-41
132	dbj|AB128627.1| Oryza grandiglumis chloroplast DNA, containing S...	178	1e-41
133	dbj|AB128626.1| Oryza alta chloroplast DNA, containing SSR regio...	178	1e-41
134	dbj|AB128625.1| Oryza grandiglumis chloroplast DNA, containing S...	178	1e-41
135	dbj|AB128624.1| Oryza punctata chloroplast DNA, containing SSR r...	178	1e-41
136	dbj|AB128623.1| Oryza punctata chloroplast DNA, containing SSR r...	178	1e-41
137	dbj|AB128622.1| Oryza eichingeri chloroplast DNA, containing SSR...	178	1e-41
138	dbj|AB128621.1| Oryza officinalis chloroplast DNA, containing SS...	178	1e-41
139	dbj|AB128620.1| Oryza officinalis chloroplast DNA, containing SS...	178	1e-41
140	dbj|AB128619.1| Oryza punctata chloroplast DNA, containing SSR r...	178	1e-41
141	dbj|AB128618.1| Oryza minuta chloroplast DNA, containing SSR reg...	178	1e-41
142	dbj|AB128617.1| Oryza latifolia chloroplast DNA, containing SSR ...	178	1e-41
143	dbj|AB128616.1| Oryza minuta chloroplast DNA, containing SSR reg...	178	1e-41
144	dbj|AB128615.1| Oryza officinalis chloroplast DNA, containing SS...	178	1e-41
145	gb|M22826.1|RICCPRPL Oryza sativa chloroplast ribosomal protein ...	178	1e-41
146	dbj|AP006052.3| Oryza sativa (japonica cultivar-group) genomic D...	178	1e-41
147	dbj|AP005483.3| Oryza sativa (japonica cultivar-group) genomic D...	178	1e-41
148	dbj|AP004662.3| Oryza sativa (japonica cultivar-group) genomic D...	178	1e-41
149	dbj|AK059477.1| Oryza sativa (japonica cultivar-group) cDNA clon...	178	1e-41
150	gb|L40578.1|RICCPRPM Oryza sativa chloroplast ribosomal protein ...	178	1e-41
151	gb|DQ369790.1| Festuca roemeri isolate 16 PsbA (psbA) gene, part...	176	6e-41
152	gb|DQ369788.1| Festuca roemeri isolate 15 PsbA (psbA) gene, part...	176	6e-41
153	gb|DQ369786.1| Festuca roemeri isolate 14 PsbA (psbA) gene, part...	176	6e-41
154	gb|DQ369784.1| Festuca roemeri isolate 13 PsbA (psbA) gene, part...	176	6e-41
155	gb|DQ369782.1| Festuca roemeri isolate 12 PsbA (psbA) gene, part...	176	6e-41
156	gb|DQ369780.1| Festuca roemeri isolate 11 PsbA (psbA) gene, part...	176	6e-41
157	gb|DQ369778.1| Festuca idahoensis isolate 10 PsbA (psbA) gene, p...	176	6e-41
158	gb|DQ369776.1| Festuca valesiaca isolate 9 PsbA (psbA) gene, par...	176	6e-41
159	gb|DQ369774.1| Festuca idahoensis isolate 8 PsbA (psbA) gene, pa...	176	6e-41
160	gb|DQ369772.1| Festuca roemeri isolate 7.2 PsbA (psbA) gene, par...	176	6e-41
161	gb|DQ369770.1| Festuca idahoensis isolate 7.1 PsbA (psbA) gene, ...	176	6e-41
162	gb|DQ369768.1| Festuca roemeri isolate 6.2 PsbA (psbA) gene, par...	176	6e-41
163	gb|DQ369766.1| Festuca idahoensis isolate 6.1 PsbA (psbA) gene, ...	176	6e-41
164	gb|AY769121.1| Axonopus polystachyus psbA-trnH intergenic spacer...	172	9e-40
165	gb|AY769119.1| Axonopus compressus psbA-trnH intergenic spacer, ...	172	9e-40
166	gb|AY769117.1| Axonopus argentinus psbA-trnH intergenic spacer, ...	172	9e-40
167	gb|AY769129.1| Paspalum dedeccae psbA-trnH intergenic spacer, pa...	168	1e-38
168	gb|DQ369764.1| Festuca idahoensis isolate 5 PsbA (psbA) gene, pa...	168	1e-38
169	emb|AL732650.5|CNS08C9P Oryza sativa chromosome 12, . BAC OSJNBa...	168	1e-38
170	gb|AY769144.1| Paspalum pauciciliatum psbA-trnH intergenic space...	159	1e-35
171	gb|AY769118.1| Axonopus brasiliensis psbA-trnH intergenic spacer...	159	1e-35
172	dbj|AB128657.1| Oryza brachyantha chloroplast DNA, containing SS...	153	8e-34
173	gb|AY769120.1| Axonopus siccus psbA-trnH intergenic spacer, part...	151	3e-33
174	emb|AL731585.5| Oryza sativa genomic DNA, chromosome 4, BAC clon...	141	3e-30
175	emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast ...	133	8e-28
176	emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA	117	5e-23
177	gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, c...	117	5e-23
178	dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete s...	117	5e-23
179	dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, compl...	117	5e-23
180	gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome	117	5e-23
181	gb|AY727185.1| Pseudotrillium rivale psbA-trnH intergenic spacer...	111	3e-21
182	emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome	109	1e-20
183	gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloropla...	109	1e-20
184	gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, ...	109	1e-20
185	gb|AY582139.1| Panax ginseng chloroplast, complete genome	103	7e-19
186	gb|DQ006171.1| Commelina communis voucher Wells 4872 US psbA-trn...	100	1e-17
187	dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...	98	4e-17
188	dbj|AP003260.5| Oryza sativa (japonica cultivar-group) genomic D...	98	4e-17
189	gb|AY727187.1| Trillium ovatum psbA-trnH intergenic spacer, part...	96	2e-16
190	gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3	94	7e-16
191	gb|AC079633.9|AC079633 Genomic Sequence for Oryza sativa, Nippon...	94	7e-16
192	dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...	94	7e-16
193	dbj|AP005880.4| Oryza sativa (japonica cultivar-group) genomic D...	94	7e-16
194	gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, ...	92	3e-15
195	gb|AY727186.1| Trillium texanum psbA-trnH intergenic spacer, par...	88	4e-14
196	gb|DQ006202.1| Trillium sessile voucher Wells 4879 US PsbA (psbA...	88	4e-14
197	gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloropl...	86	2e-13
198	emb|AJ315790.1|OSA315790 Oryza sativa partial BP-73 gene for SAP...	86	2e-13
199	emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complet...	82	2e-12
200	emb|AJ970307.1| Cucumis sativus chloroplast complete genome	78	4e-11
201	gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid...	78	4e-11
202	emb|AJ627251.1| Nymphaea alba chloroplast, complete genome	72	2e-09
203	gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, ...	72	2e-09
204	gb|AY962222.1| Hevea brasiliensis clone hmct52 microsatellite se...	68	4e-08
205	emb|X13336.1|CHSORP Spinacia oleracea plastid genes rps3, rps19,...	68	4e-08
206	emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast ...	68	4e-08
207	emb|AJ879453.1| Acorus calamus chloroplast, complete genome	68	4e-08
208	gb|DQ069474.1| Yucca schidigera ribosomal protein S19 (rps19) ge...	60	9e-06
209	gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast...	58	4e-05
210	gb|DQ069473.1| Typha latifolia ribosomal protein S19 (rps19) gen...	52	0.002
211	gb|AC120884.2| Oryza sativa (japonica cultivar-group) chromosome...	52	0.002
212	emb|X07521.1|HVD1PSBA Hordeum vulgare chloroplast psbA gene for ...	52	0.002
213	dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...	52	0.002
214	gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome...	52	0.002
215	gb|M38374.1|BLYCPPSBAB Barley chloroplast herbicide-binding prot...	52	0.002
216	emb|X07942.1|CHHVPSBA Barley chloroplast psbA gene	52	0.002
217	gb|AC097174.2| Oryza sativa (japonica cultivar-group) chromosome...	50	0.009
218	dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...	50	0.009
219	gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, comple...	48	0.035
220	gb|DQ069472.1| Ranunculus macranthus ribosomal protein S19 (rps1...	46	0.14
221	gb|DQ069471.1| Nuphar advena ribosomal protein S19 (rps19) gene,...	46	0.14
222	emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomi...	46	0.14
223	gb|AY757822.1| Acorus gramineus Rps19 (rps19) gene, partial cds;...	44	0.54
224	gb|DQ191749.1| Dioscorea zingiberensis clone 2 from Baoshan Yunn...	44	0.54
225	gb|DQ191747.1| Dioscorea zingiberensis clone 2 from Hunan Provin...	44	0.54
226	gb|AF389766.1| Uncultured bacterium clone NIW3-1 dinitrogenase r...	44	0.54
227	gb|DQ069469.1| Acorus americanus ribosomal protein S19 (rps19) g...	44	0.54
228	gb|AY424708.1| Uncultured bacterium isolate DGGE band BDS17 NifH...	44	0.54
229	gb|AY424700.1| Uncultured bacterium isolate DGGE band BRS9 NifH ...	44	0.54
230	gb|AY424699.1| Uncultured bacterium isolate DGGE band BDS8 NifH ...	44	0.54
231	gb|DQ131105.1| Dioscorea zingiberensis psbA-trnH intergenic spac...	44	0.54
232	emb|AL607000.3|OSJN00132 Oryza sativa genomic DNA, chromosome 4,...	44	0.54
233	dbj|AP004703.3| Oryza sativa (japonica cultivar-group) genomic D...	44	0.54
234	gb|DQ006176.1| Carex cephalophora voucher Lea 1483 US PsbA (psbA...	44	0.54
235	gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome...	44	0.54
236	gb|AY386787.1| Bradyrhizobium liaoningense strain Spr3-7 nitroge...	42	2.1
237	gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete ge...	42	2.1
238	gb|AE007235.1| Sinorhizobium meliloti 1021 plasmid pSymA section...	42	2.1
239	gb|DQ480974.1| Uncultured bacterium clone RT-CLY_20 dinitrogenas...	42	2.1
240	gb|DQ480958.1| Uncultured bacterium clone RT-075_39 dinitrogenas...	42	2.1
241	gb|DQ480915.1| Uncultured bacterium clone UT-CLY_37 dinitrogenas...	42	2.1
242	gb|DQ480883.1| Uncultured bacterium clone UT-600_30 dinitrogenas...	42	2.1
243	gb|AF389770.1| Uncultured bacterium clone NIS16-4 dinitrogenase ...	42	2.1
244	gb|AF389775.1| Uncultured bacterium clone NIS15-3 dinitrogenase ...	42	2.1
245	gb|AF389778.1| Uncultured bacterium clone NIS14-4 dinitrogenase ...	42	2.1
246	gb|AF389779.1| Uncultured bacterium clone NIS14-3 dinitrogenase ...	42	2.1
247	gb|AF389783.1| Uncultured bacterium clone NIS13-3 dinitrogenase ...	42	2.1
248	gb|AF389790.1| Uncultured bacterium clone NIS11-3 dinitrogenase ...	42	2.1
249	gb|AY424732.1| Uncultured bacterium isolate DGGE band BDS41 NifH...	42	2.1
250	gb|AY424697.1| Uncultured bacterium isolate DGGE band BDS6 NifH ...	42	2.1
251	gb|AY221812.1| Xanthobacter flavus clone CC1080A1 dinitrogenase ...	42	2.1
252	gb|AY232321.1| Uncultured bacterium clone GN2018A1_RT dinitrogen...	42	2.1
253	gb|AY159600.1| Uncultured Sinorhizobium sp. clone nifH102 NifH (...	42	2.1
254	gb|AY159587.1| Uncultured Sinorhizobium sp. clone nifH11 NifH (n...	42	2.1
255	gb|AY360976.1| Uncultured bacterium cluster O NifH (nifH) gene, ...	42	2.1
256	gb|AY196404.1| Uncultured nitrogen-fixing bacterium clone g1-HW1...	42	2.1
257	ref|XM_804647.1| Trypanosoma cruzi strain CL Brener retrotranspo...	42	2.1
258	gb|AC119828.9| Mus musculus chromosome 10, clone RP23-186A24, co...	42	2.1
259	emb|AL606632.5| Oryza sativa genomic DNA, chromosome 4, BAC clon...	42	2.1
260	emb|AJ716367.1| Uncultured bacterium partial nifH gene for dinit...	42	2.1
261	emb|AJ716364.1| Uncultured bacterium partial nifH gene for dinit...	42	2.1
262	emb|AJ716363.1| Uncultured bacterium partial nifH gene for dinit...	42	2.1
263	emb|AJ716347.1| Uncultured bacterium partial nifH gene for dinit...	42	2.1
264	emb|AJ716276.1| Uncultured bacterium partial nifH gene for dinit...	42	2.1
265	emb|AJ716274.1| Uncultured bacterium partial nifH gene for dinit...	42	2.1
266	gb|AF484656.1| Sinorhizobium sp. xhj12s nitrogenase iron protein...	42	2.1
267	gb|AF484635.1| Bradyrhizobium sp. 48b nitrogenase iron protein-l...	42	2.1
268	gb|AF484634.1| Bradyrhizobium sp. 48a nitrogenase iron protein (...	42	2.1
269	gb|AF484633.1| Bradyrhizobium sp. 49b nitrogenase iron protein (...	42	2.1
270	gb|AF484632.1| Bradyrhizobium sp. 40a nitrogenase iron protein-l...	42	2.1
271	gb|AF484631.1| Bradyrhizobium sp. 125e nitrogenase iron protein ...	42	2.1
272	gb|AF484629.1| Bradyrhizobium sp. 108a1 nitrogenase iron protein...	42	2.1
273	gb|AF484628.1| Bradyrhizobium sp. 123b nitrogenase iron protein ...	42	2.1
274	dbj|AB217474.1| Sphingomonas azotifigens nifH gene for dinitroge...	42	2.1
275	dbj|AB182914.1| Pleomorphomonas oryzae nifH gene for Fe protein ...	42	2.1
276	gb|DQ413016.1| Sinorhizobium meliloti isolate RP254 NifH (nifH) ...	42	2.1
277	gb|DQ426077.1| Uncultured bacterium clone 25.101 NifH-like (nifH...	42	2.1
278	gb|DQ425401.1| Uncultured bacterium clone 4.77 NifH-like (nifH) ...	42	2.1
279	dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ...	42	2.1
280	dbj|AB208384.1| Uncultured nitrogen-fixing bacterium mRNA for di...	42	2.1
281	gb|AF296349.1|AF296349 Xanthobacter autotrophicus clone p11xa di...	42	2.1
282	gb|AF296348.1|AF296348 Xanthobacter autotrophicus clone p10xa di...	42	2.1
283	gb|AY795615.1| Uncultured bacterium clone nifH.Pucci.S8 dinitrog...	42	2.1
284	gb|AC091522.23| Mus musculus strain C57BL/6J chromosome 10 clone...	42	2.1
285	gb|AY724114.2| Uncultured bacterium clone DUNnif031 (+1A) (OTU#0...	42	2.1
286	gb|AY724113.2| Uncultured bacterium clone DUNnif030 (+1A) (OTU#0...	42	2.1
287	gb|AY724112.2| Uncultured bacterium clone DUNnif029 (+1A) (OTU#0...	42	2.1
288	gb|AY724109.2| Uncultured bacterium clone DUNnif026 (+1A) (OTU#0...	42	2.1
289	gb|AY724102.2| Uncultured bacterium clone DUNnif021 (+1A) (OTU#0...	42	2.1
290	gb|AY724101.2| Uncultured bacterium clone DUNnif020 (+1A) (OTU#0...	42	2.1
291	gb|AY934877.1| Sinorhizobium sp. CCBAU 53044B nitrogenase reduct...	42	2.1
292	gb|AY912768.1| Uncultured forest soil bacterium clone DUNnif377 ...	42	2.1
293	gb|AY912583.1| Uncultured forest soil bacterium clone DUNnif192 ...	42	2.1
294	gb|AY912577.1| Uncultured forest soil bacterium clone DUNnif186 ...	42	2.1
295	gb|AY912569.1| Uncultured forest soil bacterium clone DUNnif178 ...	42	2.1
296	gb|AY912555.1| Uncultured forest soil bacterium clone DUNnif164 ...	42	2.1
297	emb|AL662985.3|OSJN00189 Oryza sativa genomic DNA, chromosome 4,...	42	2.1
298	gb|AY829685.1| Uncultured bacterium clone TF25011 nitrogenase ir...	40	8.5
299	gb|DQ224696.1| Uncultured bacterium clone nif1004424L92 dinitrog...	40	8.5
300	gb|AY787583.1| Uncultured bacterium clone 52_Z65C nitrogenase ir...	40	8.5
301	gb|DQ059362.1| Uncultured bacterium clone 1C-4 dinitrogenase red...	40	8.5
302	gb|AC119244.12| Mus musculus chromosome 5, clone RP24-231P10, co...	40	8.5
303	gb|AC125025.7| Mus musculus chromosome 5, clone RP24-340K5, comp...	40	8.5
304	gb|DQ481381.1| Uncultured microorganism clone 19390A6 dinitrogen...	40	8.5
305	gb|DQ481379.1| Uncultured microorganism clone 19390A3 dinitrogen...	40	8.5
306	gb|DQ481376.1| Uncultured microorganism clone 19390A15 dinitroge...	40	8.5
307	gb|DQ481374.1| Uncultured microorganism clone 19390A13 dinitroge...	40	8.5
308	gb|DQ481034.1| Uncultured bacterium clone LT-CLY_21 dinitrogenas...	40	8.5
309	gb|DQ480917.1| Uncultured bacterium clone UT-CLY_45 dinitrogenas...	40	8.5
310	gb|AF389713.1| Uncultured bacterium clone SIW2-3 dinitrogenase r...	40	8.5
311	gb|AF315428.1| Uncultured temperate forest soil bacterium CF018a...	40	8.5
312	gb|AF035492.1| Uncultured bacterium NR1608 dinitrogenase reducta...	40	8.5
313	gb|AF035505.1| Uncultured bacterium NR1621 dinitrogenase reducta...	40	8.5
314	gb|AY221811.1| Sinorhizobium meliloti clone CC1079A1 dinitrogena...	40	8.5
315	gb|AC122399.4| Mus musculus BAC clone RP24-92B2 from chromosome ...	40	8.5
316	gb|AY196461.1| Uncultured nitrogen-fixing bacterium clone f1-PA3...	40	8.5
317	gb|AY196457.1| Uncultured nitrogen-fixing bacterium clone f1-HW9...	40	8.5
318	gb|AY196456.1| Uncultured nitrogen-fixing bacterium clone f1-HW8...	40	8.5
319	gb|AY196454.1| Uncultured nitrogen-fixing bacterium clone f1-HW5...	40	8.5
320	gb|AY196452.1| Uncultured nitrogen-fixing bacterium clone f1-HW3...	40	8.5
321	gb|AY196451.1| Uncultured nitrogen-fixing bacterium clone f1-HW2...	40	8.5
322	gb|AY196450.1| Uncultured nitrogen-fixing bacterium clone f1-HW1...	40	8.5
323	gb|AY196422.1| Uncultured nitrogen-fixing bacterium clone g1-HA1...	40	8.5
324	gb|AC125101.3| Mus musculus BAC clone RP24-207F9 from chromosome...	40	8.5
325	gb|AC127240.3| Mus musculus BAC clone RP24-387H11 from chromosom...	40	8.5
326	emb|AL365277.23| Human DNA sequence from clone RP11-69E11 on chr...	40	8.5
327	emb|AL355132.19| Human DNA sequence from clone RP11-181D10 on ch...	40	8.5
328	emb|AL034451.26|HS191E19 Human DNA sequence from clone RP1-191E1...	40	8.5
329	emb|BX323591.13| Zebrafish DNA sequence from clone CH211-208C6 i...	40	8.5
330	dbj|AB188119.1| Rubrivivax gelatinosus nifH gene for iron protei...	40	8.5
331	gb|DQ398434.1| Uncultured cyanobacterium clone FALLSnif02D05 din...	40	8.5
332	gb|DQ398411.1| Uncultured cyanobacterium clone FALLSnif02A03 din...	40	8.5
333	gb|DQ426402.1| Uncultured bacterium clone 29.170 NifH-like (nifH...	40	8.5
334	gb|DQ426393.1| Uncultured bacterium clone 29.160 NifH-like (nifH...	40	8.5
335	gb|DQ426380.1| Uncultured bacterium clone 29.145 NifH-like (nifH...	40	8.5
336	gb|DQ426374.1| Uncultured bacterium clone 29.138 NifH-like (nifH...	40	8.5
337	gb|DQ426367.1| Uncultured bacterium clone 29.130 NifH-like (nifH...	40	8.5
338	gb|DQ426354.1| Uncultured bacterium clone 29.116 NifH-like (nifH...	40	8.5
339	gb|DQ426352.1| Uncultured bacterium clone 29.114 NifH-like (nifH...	40	8.5
340	gb|DQ426346.1| Uncultured bacterium clone 29.105 NifH-like (nifH...	40	8.5
341	gb|DQ426320.1| Uncultured bacterium clone 29.76 NifH-like (nifH)...	40	8.5
342	gb|DQ426319.1| Uncultured bacterium clone 29.75 NifH-like (nifH)...	40	8.5
343	gb|DQ426309.1| Uncultured bacterium clone 29.65 NifH-like (nifH)...	40	8.5
344	gb|DQ426297.1| Uncultured bacterium clone 29.53 NifH-like (nifH)...	40	8.5
345	gb|DQ426294.1| Uncultured bacterium clone 29.48 NifH-like (nifH)...	40	8.5
346	gb|DQ426289.1| Uncultured bacterium clone 29.43 NifH-like (nifH)...	40	8.5
347	gb|DQ426283.1| Uncultured bacterium clone 29.36 NifH-like (nifH)...	40	8.5
348	gb|DQ426270.1| Uncultured bacterium clone 29.12 NifH-like (nifH)...	40	8.5
349	gb|DQ425739.1| Uncultured bacterium clone 7.142 NifH-like (nifH)...	40	8.5
350	gb|AF369748.1|AF369748 Populus deltoides tRNA-His gene, complete...	40	8.5
351	gb|DQ140599.1| Uncultured bacterium clone nif1003301M15 dinitrog...	40	8.5
352	gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome	40	8.5
353	gb|U97122.1|U97122 Azoarcus tolulyticus nitrogenase iron protein...	40	8.5
354	gb|AC079905.28| Homo sapiens 12 BAC RP11-813P10 (Roswell Park Ca...	40	8.5
355	gb|AF216931.1|AF216931 Unidentified nitrogen-fixing bacteria clo...	40	8.5
356	gb|AC175058.1| Mus musculus BAC clone RP23-210C4 from chromosome...	40	8.5
357	emb|AL954710.27| Mouse DNA sequence from clone RP23-275J10 on ch...	40	8.5
358	gb|AC144364.3| Didelphis virginiana clone LB3-157N2, complete se...	40	8.5
359	gb|AF046840.1|AF046840 Marine proteobacterium 'Sippewissett 2-21...	40	8.5
360	gb|AF046836.1|AF046836 Marine proteobacterium 'Bird Shoal 8-1' n...	40	8.5
361	gb|AF046830.1|AF046830 Marine proteobacterium 'Bird Shoal 1-2' n...	40	8.5
362	emb|CT010450.15| Mouse DNA sequence from clone RP23-443B9 on chr...	40	8.5
363	gb|AC138397.4| Mus musculus BAC clone RP23-65O11 from 8, complet...	40	8.5
364	dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, co...	40	8.5
365	gb|DP000023.1| Didelphis virginiana target 1 genomic scaffold	40	8.5
366	emb|AL929310.8| Zebrafish DNA sequence from clone CH211-55A7, co...	40	8.5
367	emb|AL845167.7| Mouse DNA sequence from clone RP23-36P16 on chro...	40	8.5
368	dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complet...	40	8.5

---

>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome
          Length = 134545

 Score = 1057 bits (533), Expect = 0.0
 Identities = 586/609 (96%)
 Strand = Plus / Plus

                                                                         
Query: 14    tctttactatatttagtacaattgttatatgacacatgcnnnnnnnnatagggaaactac 73
             |||||||||||||||||||||||||||||||||||||||        || ||||||||||
Sbjct: 79882 tctttactatatttagtacaattgttatatgacacatgcttttttttatggggaaactac 79941

                                                                         
Query: 74    gtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggctttag 133
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79942 gtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggctttag 80001

                                                                         
Query: 134   taatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaat 193
             |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 80002 taataaataaattcgctttgtcgaaatccctataatgagtagcatttgcggctgccgaat 80061

                                                                         
Query: 194   aaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataacag 253
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80062 aaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataacag 80121

                                                                         
Query: 254   tttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaacagaca 313
             ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 80122 tttcctcgtagtaacgccagcgaatctcgtcaagaactctttgtgctttgaaaacagaca 80181

                                                                         
Query: 314   tagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcggttggaa 373
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80182 tagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcggttggaa 80241

                                                                         
Query: 374   ctttccttgcgagtttccttagcccacttttcttcttctttatcctagggatatacttta 433
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80242 ctttccttgcgagtttccttagcccacttttcttcttctttatcctagggatatacttta 80301

                                                                         
Query: 434   ctagtttgaaacttgtcataaataagtttattccccgcctacctttactttattttgaat 493
             |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 80302 ctagtttgaaacttgtcataaataaggttattccccgcctacctttactttattttgaat 80361

                                                                         
Query: 494   cnnnnnnnncttcttaatctttctattcagaattcagttaacgacgagatttagtatcct 553
             |        |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80362 cttttttttcttcttaatctttctattcagaattcagttaacgacgagatttagtatcct 80421

                                                                         
Query: 554   ttcttgcattttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgac 613
             |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 80422 ttcttgcattttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgac 80481

                      
Query: 614   ctaccatag 622
             |||||||||
Sbjct: 80482 ctaccatag 80490



 Score =  222 bits (112), Expect = 1e-54
 Identities = 118/120 (98%)
 Strand = Plus / Minus

                                                                          
Query: 503    cttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcat 562
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134523 cttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcat 134464

                                                                          
Query: 563    tttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
              ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 134463 tttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 134404

---

>ref|XM_481016.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2472

 Score =  626 bits (316), Expect = e-176
 Identities = 425/464 (91%)
 Strand = Plus / Minus

                                                                       
Query: 14  tctttactatatttagtacaattgttatatgacacatgcnnnnnnnnatagggaaactac 73
           ||||||||||||||||||||||||||||||||||||||         || ||  ||||||
Sbjct: 774 tctttactatatttagtacaattgttatatgacacatggttttttttatgggagaactac 715

                                                                       
Query: 74  gtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggctttag 133
           |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 714 gtcctcgagcccgaggtctgaatttattcataatagtactcctactgacttcggctttag 655

                                                                       
Query: 134 taatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaat 193
           | ||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 654 tgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgctgccgaat 595

                                                                       
Query: 194 aaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataacag 253
           |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 594 aaaccaactttaagatgggataagatgctcgataaggcatgaggttcaatatcataacag 535

                                                                       
Query: 254 tttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaacagaca 313
           |||| |||||||||||||| |||||||| || |||||||||||| |||||||||| ||||
Sbjct: 534 tttcttcgtagtaacgccaacgaatctcatccagaactctttgtactttgaaaacggaca 475

                                                                       
Query: 314 tagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcggttggaa 373
           |  |||| |||||||||||||||||||| |  |||||||||||||||||||||||||| |
Sbjct: 474 tgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagacgatcggttggta 415

                                                                       
Query: 374 ctttccttgcgagtttccttagcccacttttcttcttctttatcctagggatatacttta 433
           |||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 414 cttttcttgcgagtttccttagcccactcttcttcttctttatcctaggggtatacttta 355

                                                       
Query: 434 ctagtttgaaacttgtcataaataagtttattccccgcctacct 477
           | |||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 354 ccagtttgaaacttgtcataaataaggttattccccgcttacct 311



 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 289 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 230

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 229 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 176

---

>ref|XM_481017.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2472

 Score =  626 bits (316), Expect = e-176
 Identities = 425/464 (91%)
 Strand = Plus / Minus

                                                                       
Query: 14  tctttactatatttagtacaattgttatatgacacatgcnnnnnnnnatagggaaactac 73
           ||||||||||||||||||||||||||||||||||||||         || ||  ||||||
Sbjct: 774 tctttactatatttagtacaattgttatatgacacatggttttttttatgggagaactac 715

                                                                       
Query: 74  gtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggctttag 133
           |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 714 gtcctcgagcccgaggtctgaatttattcataatagtactcctactgacttcggctttag 655

                                                                       
Query: 134 taatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaat 193
           | ||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 654 tgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgctgccgaat 595

                                                                       
Query: 194 aaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataacag 253
           |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 594 aaaccaactttaagatgggataagatgctcgataaggcatgaggttcaatatcataacag 535

                                                                       
Query: 254 tttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaacagaca 313
           |||| |||||||||||||| |||||||| || |||||||||||| |||||||||| ||||
Sbjct: 534 tttcttcgtagtaacgccaacgaatctcatccagaactctttgtactttgaaaacggaca 475

                                                                       
Query: 314 tagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcggttggaa 373
           |  |||| |||||||||||||||||||| |  |||||||||||||||||||||||||| |
Sbjct: 474 tgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagacgatcggttggta 415

                                                                       
Query: 374 ctttccttgcgagtttccttagcccacttttcttcttctttatcctagggatatacttta 433
           |||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 414 cttttcttgcgagtttccttagcccactcttcttcttctttatcctaggggtatacttta 355

                                                       
Query: 434 ctagtttgaaacttgtcataaataagtttattccccgcctacct 477
           | |||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 354 ccagtttgaaacttgtcataaataaggttattccccgcttacct 311



 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 289 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 230

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 229 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 176

---

>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast,
             complete genome
          Length = 134551

 Score =  626 bits (316), Expect = e-176
 Identities = 425/464 (91%)
 Strand = Plus / Plus

                                                                         
Query: 14    tctttactatatttagtacaattgttatatgacacatgcnnnnnnnnatagggaaactac 73
             ||||||||||||||||||||||||||||||||||||||         || ||  ||||||
Sbjct: 80142 tctttactatatttagtacaattgttatatgacacatggttttttttatgggagaactac 80201

                                                                         
Query: 74    gtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggctttag 133
             |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 80202 gtcctcgagcccgaggtctgaatttattcataatagtactcctactgacttcggctttag 80261

                                                                         
Query: 134   taatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaat 193
             | ||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 80262 tgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgctgccgaat 80321

                                                                         
Query: 194   aaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataacag 253
             |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 80322 aaaccaactttaagatgggataagatgctcgataaggcatgaggttcaatatcataacag 80381

                                                                         
Query: 254   tttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaacagaca 313
             |||| |||||||||||||| |||||||| || |||||||||||| |||||||||| ||||
Sbjct: 80382 tttcttcgtagtaacgccaacgaatctcatccagaactctttgtactttgaaaacggaca 80441

                                                                         
Query: 314   tagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcggttggaa 373
             |  |||| |||||||||||||||||||| |  |||||||||||||||||||||||||| |
Sbjct: 80442 tgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagacgatcggttggta 80501

                                                                         
Query: 374   ctttccttgcgagtttccttagcccacttttcttcttctttatcctagggatatacttta 433
             |||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 80502 cttttcttgcgagtttccttagcccactcttcttcttctttatcctaggggtatacttta 80561

                                                         
Query: 434   ctagtttgaaacttgtcataaataagtttattccccgcctacct 477
             | |||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 80562 ccagtttgaaacttgtcataaataaggttattccccgcttacct 80605



 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                          
Query: 509    aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
              ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 134529 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 134470

                                                                    
Query: 569    aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
              ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 134469 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 134416



 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Plus

                                                                         
Query: 509   aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 80627 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 80686

                                                                   
Query: 569   aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
             ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 80687 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 80740

---

>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast,
             complete genome
          Length = 134551

 Score =  626 bits (316), Expect = e-176
 Identities = 425/464 (91%)
 Strand = Plus / Plus

                                                                         
Query: 14    tctttactatatttagtacaattgttatatgacacatgcnnnnnnnnatagggaaactac 73
             ||||||||||||||||||||||||||||||||||||||         || ||  ||||||
Sbjct: 80142 tctttactatatttagtacaattgttatatgacacatggttttttttatgggagaactac 80201

                                                                         
Query: 74    gtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggctttag 133
             |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 80202 gtcctcgagcccgaggtctgaatttattcataatagtactcctactgacttcggctttag 80261

                                                                         
Query: 134   taatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaat 193
             | ||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 80262 tgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgctgccgaat 80321

                                                                         
Query: 194   aaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataacag 253
             |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 80322 aaaccaactttaagatgggataagatgctcgataaggcatgaggttcaatatcataacag 80381

                                                                         
Query: 254   tttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaacagaca 313
             |||| |||||||||||||| |||||||| || |||||||||||| |||||||||| ||||
Sbjct: 80382 tttcttcgtagtaacgccaacgaatctcatccagaactctttgtactttgaaaacggaca 80441

                                                                         
Query: 314   tagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcggttggaa 373
             |  |||| |||||||||||||||||||| |  |||||||||||||||||||||||||| |
Sbjct: 80442 tgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagacgatcggttggta 80501

                                                                         
Query: 374   ctttccttgcgagtttccttagcccacttttcttcttctttatcctagggatatacttta 433
             |||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 80502 cttttcttgcgagtttccttagcccactcttcttcttctttatcctaggggtatacttta 80561

                                                         
Query: 434   ctagtttgaaacttgtcataaataagtttattccccgcctacct 477
             | |||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 80562 ccagtttgaaacttgtcataaataaggttattccccgcttacct 80605



 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                          
Query: 509    aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
              ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 134529 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 134470

                                                                    
Query: 569    aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
              ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 134469 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 134416



 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Plus

                                                                         
Query: 509   aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 80627 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 80686

                                                                   
Query: 569   aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
             ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 80687 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 80740

---

>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast,
             complete genome
          Length = 134496

 Score =  626 bits (316), Expect = e-176
 Identities = 425/464 (91%)
 Strand = Plus / Plus

                                                                         
Query: 14    tctttactatatttagtacaattgttatatgacacatgcnnnnnnnnatagggaaactac 73
             ||||||||||||||||||||||||||||||||||||||         || ||  ||||||
Sbjct: 80085 tctttactatatttagtacaattgttatatgacacatggttttttttatgggagaactac 80144

                                                                         
Query: 74    gtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggctttag 133
             |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 80145 gtcctcgagcccgaggtctgaatttattcataatagtactcctactgacttcggctttag 80204

                                                                         
Query: 134   taatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaat 193
             | ||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 80205 tgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgctgccgaat 80264

                                                                         
Query: 194   aaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataacag 253
             |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 80265 aaaccaactttaagatgggataagatgctcgataaggcatgaggttcaatatcataacag 80324

                                                                         
Query: 254   tttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaacagaca 313
             |||| |||||||||||||| |||||||| || |||||||||||| |||||||||| ||||
Sbjct: 80325 tttcttcgtagtaacgccaacgaatctcatccagaactctttgtactttgaaaacggaca 80384

                                                                         
Query: 314   tagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcggttggaa 373
             |  |||| |||||||||||||||||||| |  |||||||||||||||||||||||||| |
Sbjct: 80385 tgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagacgatcggttggta 80444

                                                                         
Query: 374   ctttccttgcgagtttccttagcccacttttcttcttctttatcctagggatatacttta 433
             |||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 80445 cttttcttgcgagtttccttagcccactcttcttcttctttatcctaggggtatacttta 80504

                                                         
Query: 434   ctagtttgaaacttgtcataaataagtttattccccgcctacct 477
             | |||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 80505 ccagtttgaaacttgtcataaataaggttattccccgcttacct 80548



 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                          
Query: 509    aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
              ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 134478 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 134419

                                                                    
Query: 569    aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
              ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 134418 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 134365



 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Plus

                                                                         
Query: 509   aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 80572 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 80631

                                                                   
Query: 569   aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
             ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 80632 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 80685

---

>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome
          Length = 134525

 Score =  626 bits (316), Expect = e-176
 Identities = 425/464 (91%)
 Strand = Plus / Plus

                                                                         
Query: 14    tctttactatatttagtacaattgttatatgacacatgcnnnnnnnnatagggaaactac 73
             ||||||||||||||||||||||||||||||||||||||         || ||  ||||||
Sbjct: 80130 tctttactatatttagtacaattgttatatgacacatggttttttttatgggagaactac 80189

                                                                         
Query: 74    gtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggctttag 133
             |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 80190 gtcctcgagcccgaggtctgaatttattcataatagtactcctactgacttcggctttag 80249

                                                                         
Query: 134   taatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaat 193
             | ||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 80250 tgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgctgccgaat 80309

                                                                         
Query: 194   aaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataacag 253
             |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 80310 aaaccaactttaagatgggataagatgctcgataaggcatgaggttcaatatcataacag 80369

                                                                         
Query: 254   tttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaacagaca 313
             |||| |||||||||||||| |||||||| || |||||||||||| |||||||||| ||||
Sbjct: 80370 tttcttcgtagtaacgccaacgaatctcatccagaactctttgtactttgaaaacggaca 80429

                                                                         
Query: 314   tagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcggttggaa 373
             |  |||| |||||||||||||||||||| |  |||||||||||||||||||||||||| |
Sbjct: 80430 tgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagacgatcggttggta 80489

                                                                         
Query: 374   ctttccttgcgagtttccttagcccacttttcttcttctttatcctagggatatacttta 433
             |||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 80490 cttttcttgcgagtttccttagcccactcttcttcttctttatcctaggggtatacttta 80549

                                                         
Query: 434   ctagtttgaaacttgtcataaataagtttattccccgcctacct 477
             | |||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 80550 ccagtttgaaacttgtcataaataaggttattccccgcttacct 80593



 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                          
Query: 509    aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
              ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 134503 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 134444

                                                                    
Query: 569    aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
              ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 134443 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 134390



 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Plus

                                                                         
Query: 509   aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 80615 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 80674

                                                                   
Query: 569   aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
             ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 80675 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 80728

---

>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08,
             complete sequence
          Length = 145980

 Score =  626 bits (316), Expect = e-176
 Identities = 425/464 (91%)
 Strand = Plus / Minus

                                                                         
Query: 14    tctttactatatttagtacaattgttatatgacacatgcnnnnnnnnatagggaaactac 73
             ||||||||||||||||||||||||||||||||||||||         || ||  ||||||
Sbjct: 70612 tctttactatatttagtacaattgttatatgacacatggttttttttatgggagaactac 70553

                                                                         
Query: 74    gtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggctttag 133
             |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 70552 gtcctcgagcccgaggtctgaatttattcataatagtactcctactgacttcggctttag 70493

                                                                         
Query: 134   taatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaat 193
             | ||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 70492 tgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgctgccgaat 70433

                                                                         
Query: 194   aaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataacag 253
             |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 70432 aaaccaactttaagatgggataagatgctcgataaggcatgaggttcaatatcataacag 70373

                                                                         
Query: 254   tttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaacagaca 313
             |||| |||||||||||||| |||||||| || |||||||||||| |||||||||| ||||
Sbjct: 70372 tttcttcgtagtaacgccaacgaatctcatccagaactctttgtactttgaaaacggaca 70313

                                                                         
Query: 314   tagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcggttggaa 373
             |  |||| |||||||||||||||||||| |  |||||||||||||||||||||||||| |
Sbjct: 70312 tgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagacgatcggttggta 70253

                                                                         
Query: 374   ctttccttgcgagtttccttagcccacttttcttcttctttatcctagggatatacttta 433
             |||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 70252 cttttcttgcgagtttccttagcccactcttcttcttctttatcctaggggtatacttta 70193

                                                         
Query: 434   ctagtttgaaacttgtcataaataagtttattccccgcctacct 477
             | |||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 70192 ccagtttgaaacttgtcataaataaggttattccccgcttacct 70149



 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                         
Query: 509   aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 70125 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 70066

                                                                   
Query: 569   aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
             ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 70065 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 70012



 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Plus

                                                                         
Query: 509   aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 53236 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 53295

                                                                   
Query: 569   aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
             ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 53296 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 53349

---

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score =  626 bits (316), Expect = e-176
 Identities = 425/464 (91%)
 Strand = Plus / Plus

                                                                           
Query: 14      tctttactatatttagtacaattgttatatgacacatgcnnnnnnnnatagggaaactac 73
               ||||||||||||||||||||||||||||||||||||||         || ||  ||||||
Sbjct: 9212565 tctttactatatttagtacaattgttatatgacacatggttttttttatgggagaactac 9212624

                                                                           
Query: 74      gtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggctttag 133
               |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 9212625 gtcctcgagcccgaggtctgaatttattcataatagtactcctactgacttcggctttag 9212684

                                                                           
Query: 134     taatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaat 193
               | ||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 9212685 tgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgctgccgaat 9212744

                                                                           
Query: 194     aaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataacag 253
               |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 9212745 aaaccaactttaagatgggataagatgctcgataaggcatgaggttcaatatcataacag 9212804

                                                                           
Query: 254     tttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaacagaca 313
               |||| |||||||||||||| |||||||| || |||||||||||| |||||||||| ||||
Sbjct: 9212805 tttcttcgtagtaacgccaacgaatctcatccagaactctttgtactttgaaaacggaca 9212864

                                                                           
Query: 314     tagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcggttggaa 373
               |  |||| |||||||||||||||||||| |  |||||||||||||||||||||||||| |
Sbjct: 9212865 tgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagacgatcggttggta 9212924

                                                                           
Query: 374     ctttccttgcgagtttccttagcccacttttcttcttctttatcctagggatatacttta 433
               |||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 9212925 cttttcttgcgagtttccttagcccactcttcttcttctttatcctaggggtatacttta 9212984

                                                           
Query: 434     ctagtttgaaacttgtcataaataagtttattccccgcctacct 477
               | |||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 9212985 ccagtttgaaacttgtcataaataaggttattccccgcttacct 9213028



 Score =  626 bits (316), Expect = e-176
 Identities = 425/464 (91%)
 Strand = Plus / Minus

                                                                           
Query: 14      tctttactatatttagtacaattgttatatgacacatgcnnnnnnnnatagggaaactac 73
               ||||||||||||||||||||||||||||||||||||||         || ||  ||||||
Sbjct: 9189539 tctttactatatttagtacaattgttatatgacacatggttttttttatgggagaactac 9189480

                                                                           
Query: 74      gtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggctttag 133
               |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 9189479 gtcctcgagcccgaggtctgaatttattcataatagtactcctactgacttcggctttag 9189420

                                                                           
Query: 134     taatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaat 193
               | ||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 9189419 tgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgctgccgaat 9189360

                                                                           
Query: 194     aaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataacag 253
               |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 9189359 aaaccaactttaagatgggataagatgctcgataaggcatgaggttcaatatcataacag 9189300

                                                                           
Query: 254     tttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaacagaca 313
               |||| |||||||||||||| |||||||| || |||||||||||| |||||||||| ||||
Sbjct: 9189299 tttcttcgtagtaacgccaacgaatctcatccagaactctttgtactttgaaaacggaca 9189240

                                                                           
Query: 314     tagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcggttggaa 373
               |  |||| |||||||||||||||||||| |  |||||||||||||||||||||||||| |
Sbjct: 9189239 tgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagacgatcggttggta 9189180

                                                                           
Query: 374     ctttccttgcgagtttccttagcccacttttcttcttctttatcctagggatatacttta 433
               |||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 9189179 cttttcttgcgagtttccttagcccactcttcttcttctttatcctaggggtatacttta 9189120

                                                           
Query: 434     ctagtttgaaacttgtcataaataagtttattccccgcctacct 477
               | |||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 9189119 ccagtttgaaacttgtcataaataaggttattccccgcttacct 9189076



 Score =  626 bits (316), Expect = e-176
 Identities = 425/464 (91%)
 Strand = Plus / Minus

                                                                           
Query: 14      tctttactatatttagtacaattgttatatgacacatgcnnnnnnnnatagggaaactac 73
               ||||||||||||||||||||||||||||||||||||||         || ||  ||||||
Sbjct: 9112586 tctttactatatttagtacaattgttatatgacacatggttttttttatgggagaactac 9112527

                                                                           
Query: 74      gtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggctttag 133
               |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 9112526 gtcctcgagcccgaggtctgaatttattcataatagtactcctactgacttcggctttag 9112467

                                                                           
Query: 134     taatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaat 193
               | ||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 9112466 tgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgctgccgaat 9112407

                                                                           
Query: 194     aaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataacag 253
               |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 9112406 aaaccaactttaagatgggataagatgctcgataaggcatgaggttcaatatcataacag 9112347

                                                                           
Query: 254     tttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaacagaca 313
               |||| |||||||||||||| |||||||| || |||||||||||| |||||||||| ||||
Sbjct: 9112346 tttcttcgtagtaacgccaacgaatctcatccagaactctttgtactttgaaaacggaca 9112287

                                                                           
Query: 314     tagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcggttggaa 373
               |  |||| |||||||||||||||||||| |  |||||||||||||||||||||||||| |
Sbjct: 9112286 tgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagacgatcggttggta 9112227

                                                                           
Query: 374     ctttccttgcgagtttccttagcccacttttcttcttctttatcctagggatatacttta 433
               |||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 9112226 cttttcttgcgagtttccttagcccactcttcttcttctttatcctaggggtatacttta 9112167

                                                           
Query: 434     ctagtttgaaacttgtcataaataagtttattccccgcctacct 477
               | |||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 9112166 ccagtttgaaacttgtcataaataaggttattccccgcttacct 9112123



 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Plus

                                                                            
Query: 509      aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
                ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 23629454 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 23629513

                                                                      
Query: 569      aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
                ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 23629514 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 23629567



 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Plus

                                                                           
Query: 509     aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
               ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 9213052 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 9213111

                                                                     
Query: 569     aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
               ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 9213112 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 9213165



 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                           
Query: 509     aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
               ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 9189052 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 9188993

                                                                     
Query: 569     aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
               ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 9188992 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 9188939



 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                           
Query: 509     aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
               ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 9112099 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 9112040

                                                                     
Query: 569     aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
               ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 9112039 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 9111986



 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Plus

                                                                           
Query: 509     aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
               ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 9095210 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 9095269

                                                                     
Query: 569     aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
               ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 9095270 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 9095323



 Score =  141 bits (71), Expect = 3e-30
 Identities = 86/91 (94%)
 Strand = Plus / Minus

                                                                            
Query: 191      aataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataa 250
                ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 11711485 aataaaccaactttaagatgggataagatgctcgatatggcatgaggttcaatatcataa 11711426

                                               
Query: 251      cagtttcctcgtagtaacgccaccgaatctc 281
                 |||||| |||||||||||||| ||||||||
Sbjct: 11711425 tagtttcttcgtagtaacgccaacgaatctc 11711395



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 152      tgtcgaaatccctataatgagttgcatttg 181
                ||||||||||| |||||||||| |||||||
Sbjct: 18621596 tgtcgaaatccatataatgagtagcatttg 18621567



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 509      aatctttctattcagaattcagtta 533
                ||||||||||||| |||||||||||
Sbjct: 21201144 aatctttctattctgaattcagtta 21201168



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                
Query: 568     taactcgtaaaatgccgagtaggcacgaattct 600
               |||||||| ||||||||||| || |||||||||
Sbjct: 2074046 taactcgtgaaatgccgagttggtacgaattct 2074014

---

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score =  626 bits (316), Expect = e-176
 Identities = 425/464 (91%)
 Strand = Plus / Minus

                                                                           
Query: 14      tctttactatatttagtacaattgttatatgacacatgcnnnnnnnnatagggaaactac 73
               ||||||||||||||||||||||||||||||||||||||         || ||  ||||||
Sbjct: 9256929 tctttactatatttagtacaattgttatatgacacatggttttttttatgggagaactac 9256870

                                                                           
Query: 74      gtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggctttag 133
               |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 9256869 gtcctcgagcccgaggtctgaatttattcataatagtactcctactgacttcggctttag 9256810

                                                                           
Query: 134     taatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaat 193
               | ||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 9256809 tgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgctgccgaat 9256750

                                                                           
Query: 194     aaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataacag 253
               |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 9256749 aaaccaactttaagatgggataagatgctcgataaggcatgaggttcaatatcataacag 9256690

                                                                           
Query: 254     tttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaacagaca 313
               |||| |||||||||||||| |||||||| || |||||||||||| |||||||||| ||||
Sbjct: 9256689 tttcttcgtagtaacgccaacgaatctcatccagaactctttgtactttgaaaacggaca 9256630

                                                                           
Query: 314     tagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcggttggaa 373
               |  |||| |||||||||||||||||||| |  |||||||||||||||||||||||||| |
Sbjct: 9256629 tgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagacgatcggttggta 9256570

                                                                           
Query: 374     ctttccttgcgagtttccttagcccacttttcttcttctttatcctagggatatacttta 433
               |||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 9256569 cttttcttgcgagtttccttagcccactcttcttcttctttatcctaggggtatacttta 9256510

                                                           
Query: 434     ctagtttgaaacttgtcataaataagtttattccccgcctacct 477
               | |||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 9256509 ccagtttgaaacttgtcataaataaggttattccccgcttacct 9256466



 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Plus

                                                                            
Query: 509      aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
                ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 22318512 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 22318571

                                                                      
Query: 569      aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
                ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 22318572 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 22318625



 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                           
Query: 509     aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
               ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 9256444 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 9256385

                                                                     
Query: 569     aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
               ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 9256384 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 9256331



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 593      cgaattctcccaatttgcgacctaccatag 622
                ||||||| ||||||||||||||| ||||||
Sbjct: 21499813 cgaattcccccaatttgcgacctgccatag 21499784

---

>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0036E18
          Length = 141148

 Score =  626 bits (316), Expect = e-176
 Identities = 425/464 (91%)
 Strand = Plus / Minus

                                                                         
Query: 14    tctttactatatttagtacaattgttatatgacacatgcnnnnnnnnatagggaaactac 73
             ||||||||||||||||||||||||||||||||||||||         || ||  ||||||
Sbjct: 68142 tctttactatatttagtacaattgttatatgacacatggttttttttatgggagaactac 68083

                                                                         
Query: 74    gtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggctttag 133
             |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 68082 gtcctcgagcccgaggtctgaatttattcataatagtactcctactgacttcggctttag 68023

                                                                         
Query: 134   taatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaat 193
             | ||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 68022 tgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgctgccgaat 67963

                                                                         
Query: 194   aaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataacag 253
             |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 67962 aaaccaactttaagatgggataagatgctcgataaggcatgaggttcaatatcataacag 67903

                                                                         
Query: 254   tttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaacagaca 313
             |||| |||||||||||||| |||||||| || |||||||||||| |||||||||| ||||
Sbjct: 67902 tttcttcgtagtaacgccaacgaatctcatccagaactctttgtactttgaaaacggaca 67843

                                                                         
Query: 314   tagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcggttggaa 373
             |  |||| |||||||||||||||||||| |  |||||||||||||||||||||||||| |
Sbjct: 67842 tgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagacgatcggttggta 67783

                                                                         
Query: 374   ctttccttgcgagtttccttagcccacttttcttcttctttatcctagggatatacttta 433
             |||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 67782 cttttcttgcgagtttccttagcccactcttcttcttctttatcctaggggtatacttta 67723

                                                         
Query: 434   ctagtttgaaacttgtcataaataagtttattccccgcctacct 477
             | |||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 67722 ccagtttgaaacttgtcataaataaggttattccccgcttacct 67679



 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                         
Query: 509   aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 67657 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 67598

                                                                   
Query: 569   aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
             ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 67597 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 67544

---

>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome
          Length = 134494

 Score =  626 bits (316), Expect = e-176
 Identities = 425/464 (91%)
 Strand = Plus / Plus

                                                                         
Query: 14    tctttactatatttagtacaattgttatatgacacatgcnnnnnnnnatagggaaactac 73
             ||||||||||||||||||||||||||||||||||||||         || ||  ||||||
Sbjct: 80082 tctttactatatttagtacaattgttatatgacacatggttttttttatgggagaactac 80141

                                                                         
Query: 74    gtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggctttag 133
             |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 80142 gtcctcgagcccgaggtctgaatttattcataatagtactcctactgacttcggctttag 80201

                                                                         
Query: 134   taatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaat 193
             | ||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 80202 tgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgctgccgaat 80261

                                                                         
Query: 194   aaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataacag 253
             |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 80262 aaaccaactttaagatgggataagatgctcgataaggcatgaggttcaatatcataacag 80321

                                                                         
Query: 254   tttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaacagaca 313
             |||| |||||||||||||| |||||||| || |||||||||||| |||||||||| ||||
Sbjct: 80322 tttcttcgtagtaacgccaacgaatctcatccagaactctttgtactttgaaaacggaca 80381

                                                                         
Query: 314   tagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcggttggaa 373
             |  |||| |||||||||||||||||||| |  |||||||||||||||||||||||||| |
Sbjct: 80382 tgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagacgatcggttggta 80441

                                                                         
Query: 374   ctttccttgcgagtttccttagcccacttttcttcttctttatcctagggatatacttta 433
             |||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 80442 cttttcttgcgagtttccttagcccactcttcttcttctttatcctaggggtatacttta 80501

                                                         
Query: 434   ctagtttgaaacttgtcataaataagtttattccccgcctacct 477
             | |||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 80502 ccagtttgaaacttgtcataaataaggttattccccgcttacct 80545



 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                          
Query: 509    aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
              ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 134471 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 134412

                                                                    
Query: 569    aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
              ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 134411 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 134358



 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Plus

                                                                         
Query: 509   aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 80568 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 80627

                                                                   
Query: 569   aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
             ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 80628 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 80681

---

>ref|XM_479425.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2380

 Score =  618 bits (312), Expect = e-174
 Identities = 424/464 (91%)
 Strand = Plus / Minus

                                                                       
Query: 14  tctttactatatttagtacaattgttatatgacacatgcnnnnnnnnatagggaaactac 73
           ||||||||||||||||||||||||||||||||||||||         || ||  ||||||
Sbjct: 681 tctttactatatttagtacaattgttatatgacacatggttttttttatgggagaactac 622

                                                                       
Query: 74  gtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggctttag 133
           |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 621 gtcctcgagcccgaggtctgaatttattcataatagtactcctactgacttcggctttag 562

                                                                       
Query: 134 taatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaat 193
           | ||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 561 tgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgctgccgaat 502

                                                                       
Query: 194 aaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataacag 253
           |||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 501 aaaccaactttaagataggataagatgctcgataaggcatgaggttcaatatcataacag 442

                                                                       
Query: 254 tttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaacagaca 313
           |||| |||||||||||||| |||||||| || |||||||||||| |||||||||| ||||
Sbjct: 441 tttcttcgtagtaacgccaacgaatctcatccagaactctttgtactttgaaaacggaca 382

                                                                       
Query: 314 tagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcggttggaa 373
           |  |||| |||||||||||||||||||| |  |||||||||||||||||||||||||| |
Sbjct: 381 tgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagacgatcggttggta 322

                                                                       
Query: 374 ctttccttgcgagtttccttagcccacttttcttcttctttatcctagggatatacttta 433
           |||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 321 cttttcttgcgagtttccttagcccactcttcttcttctttatcctaggggtatacttta 262

                                                       
Query: 434 ctagtttgaaacttgtcataaataagtttattccccgcctacct 477
           | |||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 261 ccagtttgaaacttgtcataaataaggttattccccgcttacct 218



 Score =  170 bits (86), Expect = 3e-39
 Identities = 107/114 (93%)
 Strand = Plus / Minus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| |||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 197 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttacactttcat 138

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 137 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 84

---

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  618 bits (312), Expect = e-174
 Identities = 424/464 (91%)
 Strand = Plus / Minus

                                                                            
Query: 14       tctttactatatttagtacaattgttatatgacacatgcnnnnnnnnatagggaaactac 73
                ||||||||||||||||||||||||||||||||||||||         || ||  ||||||
Sbjct: 14453558 tctttactatatttagtacaattgttatatgacacatggttttttttatgggagaactac 14453499

                                                                            
Query: 74       gtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggctttag 133
                |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 14453498 gtcctcgagcccgaggtctgaatttattcataatagtactcctactgacttcggctttag 14453439

                                                                            
Query: 134      taatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaat 193
                | ||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 14453438 tgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgctgccgaat 14453379

                                                                            
Query: 194      aaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataacag 253
                |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 14453378 aaaccaactttaagatgggataagatgctcgataaggcatgaggttcaatatcataacag 14453319

                                                                            
Query: 254      tttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaacagaca 313
                |||| |||||||||||||| |||||||| || |||||||||||| |||||||||| ||||
Sbjct: 14453318 tttcttcgtagtaacgccaacgaatctcatccagaactctttgtactttgaaaacggaca 14453259

                                                                            
Query: 314      tagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcggttggaa 373
                |  |||| |||||||||||||||||||| |  |||||||||||||||||||| ||||| |
Sbjct: 14453258 tgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagacgatcagttggta 14453199

                                                                            
Query: 374      ctttccttgcgagtttccttagcccacttttcttcttctttatcctagggatatacttta 433
                |||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 14453198 cttttcttgcgagtttccttagcccactcttcttcttctttatcctaggggtatacttta 14453139

                                                            
Query: 434      ctagtttgaaacttgtcataaataagtttattccccgcctacct 477
                | |||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 14453138 ccagtttgaaacttgtcataaataaggttattccccgcttacct 14453095



 Score =  539 bits (272), Expect = e-150
 Identities = 376/410 (91%), Gaps = 3/410 (0%)
 Strand = Plus / Minus

                                                                            
Query: 68       aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 127
                |||||||||||||||| |||||||||||||| ||||||||||||||   |||||||||||
Sbjct: 11893711 aactacgtcctcgagcccgaggtctgaatttattcataatagtact---actgacttcgg 11893655

                                                                            
Query: 128      ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 187
                ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||| ||| 
Sbjct: 11893654 ctttagtgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgcta 11893595

                                                                            
Query: 188      ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 247
                |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 11893594 ccgaataaaccaactttaagatgggataagatgctcgataaggcatgaggttcaatatca 11893535

                                                                            
Query: 248      taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 307
                |||||||||| |||||||||||||| |||||||| || |||||||||||| |||||||||
Sbjct: 11893534 taacagtttcttcgtagtaacgccaacgaatctcatccagaactctttgtactttgaaaa 11893475

                                                                            
Query: 308      cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 367
                | |||||  |||| |||||||||||||||||||| |  ||||||||||||||| ||||||
Sbjct: 11893474 cggacatgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagatgatcgg 11893415

                                                                            
Query: 368      ttggaactttccttgcgagtttccttagcccacttttcttcttctttatcctagggatat 427
                |||| ||||| ||||||||||||||||||||||| |||||||||||||||| |||| |||
Sbjct: 11893414 ttggtacttttcttgcgagtttccttagcccactcttcttcttctttatcccaggggtat 11893355

                                                                  
Query: 428      actttactagtttgaaacttgtcataaataagtttattccccgcctacct 477
                ||||||| |||||||||||||| ||||||||| ||||||||||| |||||
Sbjct: 11893354 actttaccagtttgaaacttgttataaataaggttattccccgcttacct 11893305



 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                            
Query: 509      aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
                ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 14453073 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 14453014

                                                                      
Query: 569      aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
                ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 14453013 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 14452960



 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                            
Query: 509      aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
                ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 11893284 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 11893225

                                                                      
Query: 569      aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
                ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 11893224 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 11893171



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 38/38 (100%)
 Strand = Plus / Minus

                                                      
Query: 14       tctttactatatttagtacaattgttatatgacacatg 51
                ||||||||||||||||||||||||||||||||||||||
Sbjct: 11893766 tctttactatatttagtacaattgttatatgacacatg 11893729

---

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  618 bits (312), Expect = e-174
 Identities = 424/464 (91%)
 Strand = Plus / Plus

                                                                            
Query: 14       tctttactatatttagtacaattgttatatgacacatgcnnnnnnnnatagggaaactac 73
                ||||||||||||||||||||||||||||||||||||||         || ||  ||||||
Sbjct: 27925615 tctttactatatttagtacaattgttatatgacacatggttttttttatgggagaactac 27925674

                                                                            
Query: 74       gtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggctttag 133
                |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 27925675 gtcctcgagcccgaggtctgaatttattcataatagtactcctactgacttcggctttag 27925734

                                                                            
Query: 134      taatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaat 193
                | ||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 27925735 tgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgctgccgaat 27925794

                                                                            
Query: 194      aaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataacag 253
                |||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 27925795 aaaccaactttaagataggataagatgctcgataaggcatgaggttcaatatcataacag 27925854

                                                                            
Query: 254      tttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaacagaca 313
                |||| |||||||||||||| |||||||| || |||||||||||| |||||||||| ||||
Sbjct: 27925855 tttcttcgtagtaacgccaacgaatctcatccagaactctttgtactttgaaaacggaca 27925914

                                                                            
Query: 314      tagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcggttggaa 373
                |  |||| |||||||||||||||||||| |  |||||||||||||||||||||||||| |
Sbjct: 27925915 tgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagacgatcggttggta 27925974

                                                                            
Query: 374      ctttccttgcgagtttccttagcccacttttcttcttctttatcctagggatatacttta 433
                |||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 27925975 cttttcttgcgagtttccttagcccactcttcttcttctttatcctaggggtatacttta 27926034

                                                            
Query: 434      ctagtttgaaacttgtcataaataagtttattccccgcctacct 477
                | |||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 27926035 ccagtttgaaacttgtcataaataaggttattccccgcttacct 27926078



 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                            
Query: 509      aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
                ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 14191145 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 14191086

                                                                      
Query: 569      aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
                ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 14191085 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 14191032



 Score =  170 bits (86), Expect = 3e-39
 Identities = 107/114 (93%)
 Strand = Plus / Plus

                                                                            
Query: 509      aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
                ||||||||||||| |||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 27926099 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttacactttcat 27926158

                                                                      
Query: 569      aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
                ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 27926159 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 27926212



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 62/67 (92%)
 Strand = Plus / Minus

                                                                            
Query: 136      atgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataa 195
                ||||||||||| |||||||||||||||||||||||||| | |||||| | ||||||||||
Sbjct: 10159884 atgaataaatttgctttgtcgaaatccctataatgagtagtatttgctgttgccgaataa 10159825

                       
Query: 196      accaact 202
                |||||||
Sbjct: 10159824 accaact 10159818



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 96/114 (84%), Gaps = 9/114 (7%)
 Strand = Plus / Minus

                                                                            
Query: 229      ggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatctcgtcaaga 288
                ||||||||||||||||||||||  ||||| ||||||||||||      ||||| | ||||
Sbjct: 10159803 ggcatgaggttcagtatcataatggtttcttcgtagtaacgc------atctcatgaaga 10159750

                                                                      
Query: 289      actc-tttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaac 341
                |||| ||||| |||||||||| |||||  ||||  |||||||||||||||||||
Sbjct: 10159749 actcttttgtactttgaaaacggacat--ggatgtgtttttgtgctttgaaaac 10159698

---

>dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0453E03
          Length = 159980

 Score =  618 bits (312), Expect = e-174
 Identities = 424/464 (91%)
 Strand = Plus / Plus

                                                                         
Query: 14    tctttactatatttagtacaattgttatatgacacatgcnnnnnnnnatagggaaactac 73
             ||||||||||||||||||||||||||||||||||||||         || ||  ||||||
Sbjct: 88973 tctttactatatttagtacaattgttatatgacacatggttttttttatgggagaactac 89032

                                                                         
Query: 74    gtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggctttag 133
             |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 89033 gtcctcgagcccgaggtctgaatttattcataatagtactcctactgacttcggctttag 89092

                                                                         
Query: 134   taatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaat 193
             | ||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 89093 tgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgctgccgaat 89152

                                                                         
Query: 194   aaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataacag 253
             |||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 89153 aaaccaactttaagataggataagatgctcgataaggcatgaggttcaatatcataacag 89212

                                                                         
Query: 254   tttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaacagaca 313
             |||| |||||||||||||| |||||||| || |||||||||||| |||||||||| ||||
Sbjct: 89213 tttcttcgtagtaacgccaacgaatctcatccagaactctttgtactttgaaaacggaca 89272

                                                                         
Query: 314   tagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcggttggaa 373
             |  |||| |||||||||||||||||||| |  |||||||||||||||||||||||||| |
Sbjct: 89273 tgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagacgatcggttggta 89332

                                                                         
Query: 374   ctttccttgcgagtttccttagcccacttttcttcttctttatcctagggatatacttta 433
             |||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 89333 cttttcttgcgagtttccttagcccactcttcttcttctttatcctaggggtatacttta 89392

                                                         
Query: 434   ctagtttgaaacttgtcataaataagtttattccccgcctacct 477
             | |||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 89393 ccagtttgaaacttgtcataaataaggttattccccgcttacct 89436



 Score =  170 bits (86), Expect = 3e-39
 Identities = 107/114 (93%)
 Strand = Plus / Plus

                                                                         
Query: 509   aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
             ||||||||||||| |||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 89457 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttacactttcat 89516

                                                                   
Query: 569   aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
             ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 89517 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 89570

---

>dbj|AP003825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1343_D04
          Length = 143407

 Score =  618 bits (312), Expect = e-174
 Identities = 424/464 (91%)
 Strand = Plus / Plus

                                                                         
Query: 14    tctttactatatttagtacaattgttatatgacacatgcnnnnnnnnatagggaaactac 73
             ||||||||||||||||||||||||||||||||||||||         || ||  ||||||
Sbjct: 14949 tctttactatatttagtacaattgttatatgacacatggttttttttatgggagaactac 15008

                                                                         
Query: 74    gtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggctttag 133
             |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 15009 gtcctcgagcccgaggtctgaatttattcataatagtactcctactgacttcggctttag 15068

                                                                         
Query: 134   taatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaat 193
             | ||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 15069 tgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgctgccgaat 15128

                                                                         
Query: 194   aaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataacag 253
             |||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 15129 aaaccaactttaagataggataagatgctcgataaggcatgaggttcaatatcataacag 15188

                                                                         
Query: 254   tttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaacagaca 313
             |||| |||||||||||||| |||||||| || |||||||||||| |||||||||| ||||
Sbjct: 15189 tttcttcgtagtaacgccaacgaatctcatccagaactctttgtactttgaaaacggaca 15248

                                                                         
Query: 314   tagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcggttggaa 373
             |  |||| |||||||||||||||||||| |  |||||||||||||||||||||||||| |
Sbjct: 15249 tgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagacgatcggttggta 15308

                                                                         
Query: 374   ctttccttgcgagtttccttagcccacttttcttcttctttatcctagggatatacttta 433
             |||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 15309 cttttcttgcgagtttccttagcccactcttcttcttctttatcctaggggtatacttta 15368

                                                         
Query: 434   ctagtttgaaacttgtcataaataagtttattccccgcctacct 477
             | |||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 15369 ccagtttgaaacttgtcataaataaggttattccccgcttacct 15412



 Score =  170 bits (86), Expect = 3e-39
 Identities = 107/114 (93%)
 Strand = Plus / Plus

                                                                         
Query: 509   aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
             ||||||||||||| |||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 15433 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttacactttcat 15492

                                                                   
Query: 569   aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
             ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 15493 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 15546

---

>dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0465E03
          Length = 151206

 Score =  618 bits (312), Expect = e-174
 Identities = 424/464 (91%)
 Strand = Plus / Minus

                                                                          
Query: 14     tctttactatatttagtacaattgttatatgacacatgcnnnnnnnnatagggaaactac 73
              ||||||||||||||||||||||||||||||||||||||         || ||  ||||||
Sbjct: 145361 tctttactatatttagtacaattgttatatgacacatggttttttttatgggagaactac 145302

                                                                          
Query: 74     gtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggctttag 133
              |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 145301 gtcctcgagcccgaggtctgaatttattcataatagtactcctactgacttcggctttag 145242

                                                                          
Query: 134    taatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaat 193
              | ||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 145241 tgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgctgccgaat 145182

                                                                          
Query: 194    aaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataacag 253
              |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 145181 aaaccaactttaagatgggataagatgctcgataaggcatgaggttcaatatcataacag 145122

                                                                          
Query: 254    tttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaacagaca 313
              |||| |||||||||||||| |||||||| || |||||||||||| |||||||||| ||||
Sbjct: 145121 tttcttcgtagtaacgccaacgaatctcatccagaactctttgtactttgaaaacggaca 145062

                                                                          
Query: 314    tagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcggttggaa 373
              |  |||| |||||||||||||||||||| |  |||||||||||||||||||| ||||| |
Sbjct: 145061 tgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagacgatcagttggta 145002

                                                                          
Query: 374    ctttccttgcgagtttccttagcccacttttcttcttctttatcctagggatatacttta 433
              |||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 145001 cttttcttgcgagtttccttagcccactcttcttcttctttatcctaggggtatacttta 144942

                                                          
Query: 434    ctagtttgaaacttgtcataaataagtttattccccgcctacct 477
              | |||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 144941 ccagtttgaaacttgtcataaataaggttattccccgcttacct 144898



 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                          
Query: 509    aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
              ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 144876 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 144817

                                                                    
Query: 569    aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
              ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 144816 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 144763

---

>dbj|AP005683.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1585_D02
          Length = 103172

 Score =  618 bits (312), Expect = e-174
 Identities = 424/464 (91%)
 Strand = Plus / Minus

                                                                         
Query: 14    tctttactatatttagtacaattgttatatgacacatgcnnnnnnnnatagggaaactac 73
             ||||||||||||||||||||||||||||||||||||||         || ||  ||||||
Sbjct: 53123 tctttactatatttagtacaattgttatatgacacatggttttttttatgggagaactac 53064

                                                                         
Query: 74    gtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggctttag 133
             |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 53063 gtcctcgagcccgaggtctgaatttattcataatagtactcctactgacttcggctttag 53004

                                                                         
Query: 134   taatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaat 193
             | ||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 53003 tgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgctgccgaat 52944

                                                                         
Query: 194   aaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataacag 253
             |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 52943 aaaccaactttaagatgggataagatgctcgataaggcatgaggttcaatatcataacag 52884

                                                                         
Query: 254   tttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaacagaca 313
             |||| |||||||||||||| |||||||| || |||||||||||| |||||||||| ||||
Sbjct: 52883 tttcttcgtagtaacgccaacgaatctcatccagaactctttgtactttgaaaacggaca 52824

                                                                         
Query: 314   tagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcggttggaa 373
             |  |||| |||||||||||||||||||| |  |||||||||||||||||||| ||||| |
Sbjct: 52823 tgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagacgatcagttggta 52764

                                                                         
Query: 374   ctttccttgcgagtttccttagcccacttttcttcttctttatcctagggatatacttta 433
             |||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 52763 cttttcttgcgagtttccttagcccactcttcttcttctttatcctaggggtatacttta 52704

                                                         
Query: 434   ctagtttgaaacttgtcataaataagtttattccccgcctacct 477
             | |||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 52703 ccagtttgaaacttgtcataaataaggttattccccgcttacct 52660



 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                         
Query: 509   aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 52638 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 52579

                                                                   
Query: 569   aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
             ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 52578 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 52525

---

>dbj|AK072149.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128P04, full
           insert sequence
          Length = 2475

 Score =  618 bits (312), Expect = e-174
 Identities = 424/464 (91%)
 Strand = Plus / Minus

                                                                       
Query: 14  tctttactatatttagtacaattgttatatgacacatgcnnnnnnnnatagggaaactac 73
           ||||||||||||||||||||||||||||||||||||||         || ||  ||||||
Sbjct: 774 tctttactatatttagtacaattgttatatgacacatggttttttttatgggagaactac 715

                                                                       
Query: 74  gtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggctttag 133
           |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 714 gtcctcgagcccgaggtctgaatttattcataatagtactcctactgacttcggctttag 655

                                                                       
Query: 134 taatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaat 193
           | ||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 654 tgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgctgccgaat 595

                                                                       
Query: 194 aaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataacag 253
           |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 594 aaaccaactttaagatgggataagatgctcgataaggcatgaggttcaatatcataacag 535

                                                                       
Query: 254 tttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaacagaca 313
           |||| |||||||||||||| |||||||| || |||||||||||| |||||||||| ||||
Sbjct: 534 tttcttcgtagtaacgccaacgaatctcatccagaactctttgtactttgaaaacggaca 475

                                                                       
Query: 314 tagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcggttggaa 373
           |  |||| |||||||||||||||||||| |  |||||||||||||||||||||||||| |
Sbjct: 474 tgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagacgatcggttggta 415

                                                                       
Query: 374 ctttccttgcgagtttccttagcccacttttcttcttctttatcctagggatatacttta 433
           |||| ||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||
Sbjct: 414 cttttcttgcgagtttccttagcccactcttcttcttccttatcctaggggtatacttta 355

                                                       
Query: 434 ctagtttgaaacttgtcataaataagtttattccccgcctacct 477
           | |||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 354 ccagtttgaaacttgtcataaataaggttattccccgcttacct 311



 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 289 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 230

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 229 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 176

---

>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNAb0075K12, complete sequence
          Length = 125936

 Score =  613 bits (309), Expect = e-172
 Identities = 425/465 (91%), Gaps = 1/465 (0%)
 Strand = Plus / Plus

                                                                         
Query: 14    tctttactatatttagtacaattgttatatgacacatgcnnnnnnnnatagggaaactac 73
             ||||||||||||||||||||||||||||||||||||||         || ||  ||||||
Sbjct: 78323 tctttactatatttagtacaattgttatatgacacatggttttttttatgggagaactac 78382

                                                                         
Query: 74    gtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggctttag 133
             |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 78383 gtcctcgagcccgaggtctgaatttattcataatagtactcctactgacttcggctttag 78442

                                                                         
Query: 134   taatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaat 193
             | ||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 78443 tgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgctgccgaat 78502

                                                                         
Query: 194   aaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataacag 253
             |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 78503 aaaccaactttaagatgggataagatgctcgataaggcatgaggttcaatatcataacag 78562

                                                                         
Query: 254   tttcctcgtagtaacgccaccgaatctcgtcaagaactc-tttgtgctttgaaaacagac 312
             |||| |||||||||||||| |||||||| || ||||||| ||||| |||||||||| |||
Sbjct: 78563 tttcttcgtagtaacgccaacgaatctcatccagaactcttttgtactttgaaaacggac 78622

                                                                         
Query: 313   atagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcggttgga 372
             ||  |||| |||||||||||||||||||| |  |||||||||||||||||||||||||| 
Sbjct: 78623 atgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagacgatcggttggt 78682

                                                                         
Query: 373   actttccttgcgagtttccttagcccacttttcttcttctttatcctagggatatacttt 432
             ||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 78683 acttttcttgcgagtttccttagcccactcttcttcttctttatcctaggggtatacttt 78742

                                                          
Query: 433   actagtttgaaacttgtcataaataagtttattccccgcctacct 477
             || |||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 78743 accagtttgaaacttgtcataaataaggttattccccgcttacct 78787



 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Plus

                                                                         
Query: 509   aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 78810 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 78869

                                                                   
Query: 569   aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
             ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 78870 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 78923

---

>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence
          Length = 144459

 Score =  613 bits (309), Expect = e-172
 Identities = 425/465 (91%), Gaps = 1/465 (0%)
 Strand = Plus / Plus

                                                                         
Query: 14    tctttactatatttagtacaattgttatatgacacatgcnnnnnnnnatagggaaactac 73
             ||||||||||||||||||||||||||||||||||||||         || ||  ||||||
Sbjct: 12387 tctttactatatttagtacaattgttatatgacacatggttttttttatgggagaactac 12446

                                                                         
Query: 74    gtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggctttag 133
             |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 12447 gtcctcgagcccgaggtctgaatttattcataatagtactcctactgacttcggctttag 12506

                                                                         
Query: 134   taatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaat 193
             | ||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 12507 tgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgctgccgaat 12566

                                                                         
Query: 194   aaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataacag 253
             |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 12567 aaaccaactttaagatgggataagatgctcgataaggcatgaggttcaatatcataacag 12626

                                                                         
Query: 254   tttcctcgtagtaacgccaccgaatctcgtcaagaactc-tttgtgctttgaaaacagac 312
             |||| |||||||||||||| |||||||| || ||||||| ||||| |||||||||| |||
Sbjct: 12627 tttcttcgtagtaacgccaacgaatctcatccagaactcttttgtactttgaaaacggac 12686

                                                                         
Query: 313   atagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcggttgga 372
             ||  |||| |||||||||||||||||||| |  |||||||||||||||||||||||||| 
Sbjct: 12687 atgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagacgatcggttggt 12746

                                                                         
Query: 373   actttccttgcgagtttccttagcccacttttcttcttctttatcctagggatatacttt 432
             ||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 12747 acttttcttgcgagtttccttagcccactcttcttcttctttatcctaggggtatacttt 12806

                                                          
Query: 433   actagtttgaaacttgtcataaataagtttattccccgcctacct 477
             || |||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 12807 accagtttgaaacttgtcataaataaggttattccccgcttacct 12851



 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Plus

                                                                         
Query: 509   aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 12874 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 12933

                                                                   
Query: 569   aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
             ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 12934 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 12987

---

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  613 bits (309), Expect = e-172
 Identities = 425/465 (91%), Gaps = 1/465 (0%)
 Strand = Plus / Plus

                                                                            
Query: 14       tctttactatatttagtacaattgttatatgacacatgcnnnnnnnnatagggaaactac 73
                ||||||||||||||||||||||||||||||||||||||         || ||  ||||||
Sbjct: 10371931 tctttactatatttagtacaattgttatatgacacatggttttttttatgggagaactac 10371990

                                                                            
Query: 74       gtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggctttag 133
                |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 10371991 gtcctcgagcccgaggtctgaatttattcataatagtactcctactgacttcggctttag 10372050

                                                                            
Query: 134      taatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaat 193
                | ||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 10372051 tgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgctgccgaat 10372110

                                                                            
Query: 194      aaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataacag 253
                |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 10372111 aaaccaactttaagatgggataagatgctcgataaggcatgaggttcaatatcataacag 10372170

                                                                            
Query: 254      tttcctcgtagtaacgccaccgaatctcgtcaagaactc-tttgtgctttgaaaacagac 312
                |||| |||||||||||||| |||||||| || ||||||| ||||| |||||||||| |||
Sbjct: 10372171 tttcttcgtagtaacgccaacgaatctcatccagaactcttttgtactttgaaaacggac 10372230

                                                                            
Query: 313      atagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcggttgga 372
                ||  |||| |||||||||||||||||||| |  |||||||||||||||||||||||||| 
Sbjct: 10372231 atgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagacgatcggttggt 10372290

                                                                            
Query: 373      actttccttgcgagtttccttagcccacttttcttcttctttatcctagggatatacttt 432
                ||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 10372291 acttttcttgcgagtttccttagcccactcttcttcttctttatcctaggggtatacttt 10372350

                                                             
Query: 433      actagtttgaaacttgtcataaataagtttattccccgcctacct 477
                || |||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 10372351 accagtttgaaacttgtcataaataaggttattccccgcttacct 10372395



 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Plus

                                                                            
Query: 509      aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
                ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 20816614 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 20816673

                                                                      
Query: 569      aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
                ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 20816674 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 20816727



 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Plus

                                                                            
Query: 509      aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
                ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 10372418 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 10372477

                                                                      
Query: 569      aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
                ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 10372478 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 10372531



 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                            
Query: 509      aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
                ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 10291881 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 10291822

                                                                      
Query: 569      aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
                ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 10291821 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 10291768

---

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  613 bits (309), Expect = e-172
 Identities = 425/465 (91%), Gaps = 1/465 (0%)
 Strand = Plus / Plus

                                                                            
Query: 14       tctttactatatttagtacaattgttatatgacacatgcnnnnnnnnatagggaaactac 73
                ||||||||||||||||||||||||||||||||||||||         || ||  ||||||
Sbjct: 10377970 tctttactatatttagtacaattgttatatgacacatggttttttttatgggagaactac 10378029

                                                                            
Query: 74       gtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggctttag 133
                |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 10378030 gtcctcgagcccgaggtctgaatttattcataatagtactcctactgacttcggctttag 10378089

                                                                            
Query: 134      taatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaat 193
                | ||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 10378090 tgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgctgccgaat 10378149

                                                                            
Query: 194      aaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataacag 253
                |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 10378150 aaaccaactttaagatgggataagatgctcgataaggcatgaggttcaatatcataacag 10378209

                                                                            
Query: 254      tttcctcgtagtaacgccaccgaatctcgtcaagaactc-tttgtgctttgaaaacagac 312
                |||| |||||||||||||| |||||||| || ||||||| ||||| |||||||||| |||
Sbjct: 10378210 tttcttcgtagtaacgccaacgaatctcatccagaactcttttgtactttgaaaacggac 10378269

                                                                            
Query: 313      atagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcggttgga 372
                ||  |||| |||||||||||||||||||| |  |||||||||||||||||||||||||| 
Sbjct: 10378270 atgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagacgatcggttggt 10378329

                                                                            
Query: 373      actttccttgcgagtttccttagcccacttttcttcttctttatcctagggatatacttt 432
                ||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 10378330 acttttcttgcgagtttccttagcccactcttcttcttctttatcctaggggtatacttt 10378389

                                                             
Query: 433      actagtttgaaacttgtcataaataagtttattccccgcctacct 477
                || |||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 10378390 accagtttgaaacttgtcataaataaggttattccccgcttacct 10378434



 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Plus

                                                                            
Query: 509      aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
                ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 20827878 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 20827937

                                                                      
Query: 569      aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
                ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 20827938 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 20827991



 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Plus

                                                                            
Query: 509      aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
                ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 10378457 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 10378516

                                                                      
Query: 569      aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
                ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 10378517 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 10378570



 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                            
Query: 509      aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
                ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 10297920 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 10297861

                                                                      
Query: 569      aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
                ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 10297860 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 10297807

---

>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome
          Length = 140384

 Score =  585 bits (295), Expect = e-164
 Identities = 390/421 (92%), Gaps = 3/421 (0%)
 Strand = Plus / Plus

                                                                         
Query: 68    aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 127
             ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 81914 aactacgtcctcgagctcgaggtctgaattttttcataatagtactcctactgacttcgg 81973

                                                                         
Query: 128   ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 187
             ||||||| ||||||||||||| |||||||||||||||||||||||| |||||||| ||||
Sbjct: 81974 ctttagtgatgaataaattcgttttgtcgaaatccctataatgagtagcatttgctgctg 82033

                                                                         
Query: 188   ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 247
             |||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||
Sbjct: 82034 ccgaataaaccaactttaagatgggatacgatgctcgataaggcatgagattcagtatca 82093

                                                                         
Query: 248   taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 307
             |||| |||||||||||||||||||| |||||||| || ||||||||||||||||||||||
Sbjct: 82094 taacggtttcctcgtagtaacgccagcgaatctcatctagaactctttgtgctttgaaaa 82153

                                                                         
Query: 308   cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 367
             |||||||| | || |||||||||||||||||||| |  ||||| ||||||||||||||||
Sbjct: 82154 cagacatatgtatgcgtttttgtgctttgaaaacccgttcgaatttaagtagacgatcgg 82213

                                                                         
Query: 368   ttggaactttccttgcgagtttccttagcccacttttcttcttctttatcctagggatat 427
             |||||||||| ||||||||||| || |||||    ||||||||||||||||||||| |||
Sbjct: 82214 ttggaacttttcttgcgagttttctcagccc---cttcttcttctttatcctaggggtat 82270

                                                                         
Query: 428   actttactagtttgaaacttgtcataaataagtttattccccgcctacctttactttatt 487
             ||||||| | |||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 82271 actttaccaatttgaaacttgtcataaataaggttattacccgcctacctttactttatt 82330

              
Query: 488   t 488
             |
Sbjct: 82331 t 82331



 Score =  180 bits (91), Expect = 4e-42
 Identities = 112/119 (94%)
 Strand = Plus / Minus

                                                                          
Query: 504    ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 563
              |||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||| | |
Sbjct: 140376 ttctgaatctttctattctgaattcaattaacgacgagatttagtatcctttcttgtact 140317

                                                                         
Query: 564    ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
              |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 140316 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 140258



 Score =  180 bits (91), Expect = 4e-42
 Identities = 112/119 (94%)
 Strand = Plus / Plus

                                                                         
Query: 504   ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 563
             |||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||| | |
Sbjct: 82361 ttctgaatctttctattctgaattcaattaacgacgagatttagtatcctttcttgtact 82420

                                                                        
Query: 564   ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
             |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 82421 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 82479



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 36/37 (97%)
 Strand = Plus / Plus

                                                  
Query: 14    tctttactatatttagtacaattgttatatgacacat 50
             |||||||||||||||||||||||||||||| ||||||
Sbjct: 81860 tctttactatatttagtacaattgttatattacacat 81896

---

>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome
          Length = 140454

 Score =  585 bits (295), Expect = e-164
 Identities = 390/421 (92%), Gaps = 3/421 (0%)
 Strand = Plus / Plus

                                                                         
Query: 68    aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 127
             ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 81944 aactacgtcctcgagctcgaggtctgaattttttcataatagtactcctactgacttcgg 82003

                                                                         
Query: 128   ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 187
             ||||||| ||||||||||||| |||||||||||||||||||||||| |||||||| ||||
Sbjct: 82004 ctttagtgatgaataaattcgttttgtcgaaatccctataatgagtagcatttgctgctg 82063

                                                                         
Query: 188   ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 247
             |||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||
Sbjct: 82064 ccgaataaaccaactttaagatgggatacgatgctcgataaggcatgagattcagtatca 82123

                                                                         
Query: 248   taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 307
             |||| |||||||||||||||||||| |||||||| || ||||||||||||||||||||||
Sbjct: 82124 taacggtttcctcgtagtaacgccagcgaatctcatctagaactctttgtgctttgaaaa 82183

                                                                         
Query: 308   cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 367
             |||||||| | || |||||||||||||||||||| |  ||||| ||||||||||||||||
Sbjct: 82184 cagacatatgtatgcgtttttgtgctttgaaaacccgttcgaatttaagtagacgatcgg 82243

                                                                         
Query: 368   ttggaactttccttgcgagtttccttagcccacttttcttcttctttatcctagggatat 427
             |||||||||| ||||||||||| || |||||    ||||||||||||||||||||| |||
Sbjct: 82244 ttggaacttttcttgcgagttttctcagccc---cttcttcttctttatcctaggggtat 82300

                                                                         
Query: 428   actttactagtttgaaacttgtcataaataagtttattccccgcctacctttactttatt 487
             ||||||| | |||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 82301 actttaccaatttgaaacttgtcataaataaggttattacccgcctacctttactttatt 82360

              
Query: 488   t 488
             |
Sbjct: 82361 t 82361



 Score =  180 bits (91), Expect = 4e-42
 Identities = 112/119 (94%)
 Strand = Plus / Minus

                                                                          
Query: 504    ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 563
              |||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||| | |
Sbjct: 140446 ttctgaatctttctattctgaattcaattaacgacgagatttagtatcctttcttgtact 140387

                                                                         
Query: 564    ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
              |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 140386 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 140328



 Score =  180 bits (91), Expect = 4e-42
 Identities = 112/119 (94%)
 Strand = Plus / Plus

                                                                         
Query: 504   ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 563
             |||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||| | |
Sbjct: 82391 ttctgaatctttctattctgaattcaattaacgacgagatttagtatcctttcttgtact 82450

                                                                        
Query: 564   ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
             |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 82451 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 82509



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 36/37 (97%)
 Strand = Plus / Plus

                                                  
Query: 14    tctttactatatttagtacaattgttatatgacacat 50
             |||||||||||||||||||||||||||||| ||||||
Sbjct: 81890 tctttactatatttagtacaattgttatattacacat 81926

---

>emb|Y00329.1|CHZMRP22 Maize chloroplast rpl22 gene for ribosomal protein L22
          Length = 607

 Score =  571 bits (288), Expect = e-159
 Identities = 390/422 (92%), Gaps = 4/422 (0%)
 Strand = Plus / Minus

                                                                       
Query: 68  aactacgtcctcgagctcgaggtctgaatttctt-cataatagtactcctactgacttcg 126
           ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 481 aactacgtcctcgagctcgaggtctgaatttttttcataatagtactcctactgacttcg 422

                                                                       
Query: 127 gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 186
           |||||||| ||||||||||||| |||||||||||||||||||||||| |||||||| |||
Sbjct: 421 gctttagtgatgaataaattcgttttgtcgaaatccctataatgagtagcatttgctgct 362

                                                                       
Query: 187 gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 246
           ||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||
Sbjct: 361 gccgaataaaccaactttaagatgggatacgatgctcgataaggcatgagattcagtatc 302

                                                                       
Query: 247 ataacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaa 306
           ||||| |||||||||||||||||||| |||||||| || |||||||||||||||||||||
Sbjct: 301 ataacggtttcctcgtagtaacgccagcgaatctcatctagaactctttgtgctttgaaa 242

                                                                       
Query: 307 acagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcg 366
           ||||||||| | || |||||||||||||||||||| |  ||||| |||||||||||||||
Sbjct: 241 acagacatatgtatgcgtttttgtgctttgaaaacccgttcgaatttaagtagacgatcg 182

                                                                       
Query: 367 gttggaactttccttgcgagtttccttagcccacttttcttcttctttatcctagggata 426
           ||||||||||| ||||||||||| || |||||    ||||||||||||||||||||| ||
Sbjct: 181 gttggaacttttcttgcgagttttctcagccc---cttcttcttctttatcctaggggta 125

                                                                       
Query: 427 tactttactagtttgaaacttgtcataaataagtttattccccgcctacctttactttat 486
           |||||||| | |||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 124 tactttaccaatttgaaacttgtcataaataaggttattacccgcctacctttactttat 65

             
Query: 487 tt 488
           ||
Sbjct: 64  tt 63



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 36/37 (97%)
 Strand = Plus / Minus

                                                
Query: 14  tctttactatatttagtacaattgttatatgacacat 50
           |||||||||||||||||||||||||||||| ||||||
Sbjct: 535 tctttactatatttagtacaattgttatattacacat 499



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 504 ttcttaatctttctattcagaattcagttaacg 536
           |||| ||||||||||||| ||||||| ||||||
Sbjct: 33  ttctgaatctttctattctgaattcaattaacg 1

---

>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome
          Length = 141182

 Score =  561 bits (283), Expect = e-156
 Identities = 387/421 (91%), Gaps = 3/421 (0%)
 Strand = Plus / Plus

                                                                        
Query: 68   aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 127
            ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 3053 aactacgtcctcgagctcgaggtctgaattttttcataatagtactcctactgacttcgg 3112

                                                                        
Query: 128  ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 187
            ||||||| ||||||||||| | |||||||||||||||||||||||| |||||||| ||||
Sbjct: 3113 ctttagtgatgaataaatttgttttgtcgaaatccctataatgagtagcatttgctgctg 3172

                                                                        
Query: 188  ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 247
            |||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||
Sbjct: 3173 ccgaataaaccaactttaagatgggatacgatgctcgataaggcatgagattcagtatca 3232

                                                                        
Query: 248  taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 307
            |||| |||||||||||||||||||| |||||||| || ||||||||||||||||||||||
Sbjct: 3233 taacggtttcctcgtagtaacgccagcgaatctcatctagaactctttgtgctttgaaaa 3292

                                                                        
Query: 308  cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 367
            |||||||| | || |||||||||||||||||||| |  ||||| ||||||||||||||||
Sbjct: 3293 cagacatatgtatgcgtttttgtgctttgaaaacccgttcgaatttaagtagacgatcgg 3352

                                                                        
Query: 368  ttggaactttccttgcgagtttccttagcccacttttcttcttctttatcctagggatat 427
            |||||||||| ||||||||||| || |||||    ||||||||||||||||||||| |||
Sbjct: 3353 ttggaacttttcttgcgagttttctcagccc---cttcttcttctttatcctaggggtat 3409

                                                                        
Query: 428  actttactagtttgaaacttgtcataaataagtttattccccgcctacctttactttatt 487
            ||||||| | |||||||||||||||||||||| ||||| |||||||| ||||| ||||||
Sbjct: 3410 actttaccaatttgaaacttgtcataaataaggttattacccgcctatctttattttatt 3469

             
Query: 488  t 488
            |
Sbjct: 3470 t 3470



 Score =  180 bits (91), Expect = 4e-42
 Identities = 112/119 (94%)
 Strand = Plus / Minus

                                                                         
Query: 504   ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 563
             |||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||| | |
Sbjct: 61618 ttctgaatctttctattctgaattcaattaacgacgagatttagtatcctttcttgtact 61559

                                                                        
Query: 564   ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
             |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 61558 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 61500



 Score =  180 bits (91), Expect = 4e-42
 Identities = 112/119 (94%)
 Strand = Plus / Plus

                                                                        
Query: 504  ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 563
            |||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||| | |
Sbjct: 3500 ttctgaatctttctattctgaattcaattaacgacgagatttagtatcctttcttgtact 3559

                                                                       
Query: 564  ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
            |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 3560 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 3618



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 36/37 (97%)
 Strand = Plus / Plus

                                                 
Query: 14   tctttactatatttagtacaattgttatatgacacat 50
            |||||||||||||||||||||||||||||| ||||||
Sbjct: 2999 tctttactatatttagtacaattgttatattacacat 3035

---

>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome
          Length = 141182

 Score =  561 bits (283), Expect = e-156
 Identities = 387/421 (91%), Gaps = 3/421 (0%)
 Strand = Plus / Plus

                                                                         
Query: 68    aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 127
             ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 82610 aactacgtcctcgagctcgaggtctgaattttttcataatagtactcctactgacttcgg 82669

                                                                         
Query: 128   ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 187
             ||||||| ||||||||||| | |||||||||||||||||||||||| |||||||| ||||
Sbjct: 82670 ctttagtgatgaataaatttgttttgtcgaaatccctataatgagtagcatttgctgctg 82729

                                                                         
Query: 188   ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 247
             |||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||
Sbjct: 82730 ccgaataaaccaactttaagatgggatacgatgctcgataaggcatgagattcagtatca 82789

                                                                         
Query: 248   taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 307
             |||| |||||||||||||||||||| |||||||| || ||||||||||||||||||||||
Sbjct: 82790 taacggtttcctcgtagtaacgccagcgaatctcatctagaactctttgtgctttgaaaa 82849

                                                                         
Query: 308   cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 367
             |||||||| | || |||||||||||||||||||| |  ||||| ||||||||||||||||
Sbjct: 82850 cagacatatgtatgcgtttttgtgctttgaaaacccgttcgaatttaagtagacgatcgg 82909

                                                                         
Query: 368   ttggaactttccttgcgagtttccttagcccacttttcttcttctttatcctagggatat 427
             |||||||||| ||||||||||| || |||||    ||||||||||||||||||||| |||
Sbjct: 82910 ttggaacttttcttgcgagttttctcagccc---cttcttcttctttatcctaggggtat 82966

                                                                         
Query: 428   actttactagtttgaaacttgtcataaataagtttattccccgcctacctttactttatt 487
             ||||||| | |||||||||||||||||||||| ||||| |||||||| ||||| ||||||
Sbjct: 82967 actttaccaatttgaaacttgtcataaataaggttattacccgcctatctttattttatt 83026

              
Query: 488   t 488
             |
Sbjct: 83027 t 83027



 Score =  180 bits (91), Expect = 4e-42
 Identities = 112/119 (94%)
 Strand = Plus / Minus

                                                                          
Query: 504    ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 563
              |||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||| | |
Sbjct: 141174 ttctgaatctttctattctgaattcaattaacgacgagatttagtatcctttcttgtact 141115

                                                                         
Query: 564    ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
              |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 141114 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 141056



 Score =  180 bits (91), Expect = 4e-42
 Identities = 112/119 (94%)
 Strand = Plus / Plus

                                                                         
Query: 504   ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 563
             |||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||| | |
Sbjct: 83057 ttctgaatctttctattctgaattcaattaacgacgagatttagtatcctttcttgtact 83116

                                                                        
Query: 564   ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
             |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 83117 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 83175



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 36/37 (97%)
 Strand = Plus / Plus

                                                  
Query: 14    tctttactatatttagtacaattgttatatgacacat 50
             |||||||||||||||||||||||||||||| ||||||
Sbjct: 82556 tctttactatatttagtacaattgttatattacacat 82592

---

>dbj|AP005675.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1001_G09
          Length = 118018

 Score =  539 bits (272), Expect = e-150
 Identities = 376/410 (91%), Gaps = 3/410 (0%)
 Strand = Plus / Minus

                                                                         
Query: 68    aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 127
             |||||||||||||||| |||||||||||||| ||||||||||||||   |||||||||||
Sbjct: 75201 aactacgtcctcgagcccgaggtctgaatttattcataatagtact---actgacttcgg 75145

                                                                         
Query: 128   ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 187
             ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||| ||| 
Sbjct: 75144 ctttagtgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgcta 75085

                                                                         
Query: 188   ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 247
             |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 75084 ccgaataaaccaactttaagatgggataagatgctcgataaggcatgaggttcaatatca 75025

                                                                         
Query: 248   taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 307
             |||||||||| |||||||||||||| |||||||| || |||||||||||| |||||||||
Sbjct: 75024 taacagtttcttcgtagtaacgccaacgaatctcatccagaactctttgtactttgaaaa 74965

                                                                         
Query: 308   cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 367
             | |||||  |||| |||||||||||||||||||| |  ||||||||||||||| ||||||
Sbjct: 74964 cggacatgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagatgatcgg 74905

                                                                         
Query: 368   ttggaactttccttgcgagtttccttagcccacttttcttcttctttatcctagggatat 427
             |||| ||||| ||||||||||||||||||||||| |||||||||||||||| |||| |||
Sbjct: 74904 ttggtacttttcttgcgagtttccttagcccactcttcttcttctttatcccaggggtat 74845

                                                               
Query: 428   actttactagtttgaaacttgtcataaataagtttattccccgcctacct 477
             ||||||| |||||||||||||| ||||||||| ||||||||||| |||||
Sbjct: 74844 actttaccagtttgaaacttgttataaataaggttattccccgcttacct 74795



 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                         
Query: 509   aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 74774 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 74715

                                                                   
Query: 569   aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
             ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 74714 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 74661



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 38/38 (100%)
 Strand = Plus / Minus

                                                   
Query: 14    tctttactatatttagtacaattgttatatgacacatg 51
             ||||||||||||||||||||||||||||||||||||||
Sbjct: 75256 tctttactatatttagtacaattgttatatgacacatg 75219

---

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  462 bits (233), Expect = e-127
 Identities = 405/463 (87%), Gaps = 4/463 (0%)
 Strand = Plus / Minus

                                                                            
Query: 17       ttactatatttagtacaattgttatatgacacatgcnnnnnnnnatagggaaactacgtc 76
                ||||||||||||||| |||||||||||||||||||         || ||  |||||||||
Sbjct: 18328526 ttactatatttagtagaattgttatatgacacatggttttatttatgggagaactacgtc 18328467

                                                                            
Query: 77       ctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggctttagtaa 136
                |||||||  ||||||||||||| |||||||||||||||||| |||||||||||||||| |
Sbjct: 18328466 ctcgagcctgaggtctgaatttattcataatagtactcctattgacttcggctttagtga 18328407

                                                                            
Query: 137      tgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataaa 196
                |||| ||||| ||||||||||||||| |||||||||| |||||||| |||||||||||||
Sbjct: 18328406 tgaacaaatttgctttgtcgaaatccttataatgagtagcatttgctgctgccgaataaa 18328347

                                                                            
Query: 197      ccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataacagttt 256
                ||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||
Sbjct: 18328346 ccaactttaagatgggataagatgctcgataaggcatgaggtttaatatcataacagttt 18328287

                                                                            
Query: 257      cctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaacagacatag 316
                | |||||||||| ||| | |||||| || | |||||||||| |||||||||| |||||  
Sbjct: 18328286 cttcgtagtaacaccaacaaatctcatccataactctttgtactttgaaaacggacatgt 18328227

                                                                            
Query: 317      ggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcggttgg--aac 374
                ||||  ||||| ||||||||||||  | |||| ||||||||||||||||||||||   ||
Sbjct: 18328226 ggatgtgttttcgtgctttgaaaa--ccctcgtacttaagtagacgatcggttggtatac 18328169

                                                                            
Query: 375      tttccttgcgagtttccttagcccacttttcttcttctttatcctagggatatactttac 434
                ||| |||  ||||||| || ||||||| ||||||||||||||||||||| ||||||||| 
Sbjct: 18328168 ttttcttctgagtttctttggcccactcttcttcttctttatcctaggggtatactttaa 18328109

                                                           
Query: 435      tagtttgaaacttgtcataaataagtttattccccgcctacct 477
                 |||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 18328108 cagtttgaaacttgtcataaataagattattccccgcttacct 18328066



 Score =  168 bits (85), Expect = 1e-38
 Identities = 106/113 (93%)
 Strand = Plus / Plus

                                                                            
Query: 509      aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
                ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 11412131 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 11412190

                                                                     
Query: 569      aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 621
                ||||||| ||||||||||| || |||||||| |||||||||||||||| ||||
Sbjct: 11412191 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctatcata 11412243

---

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  462 bits (233), Expect = e-127
 Identities = 405/463 (87%), Gaps = 4/463 (0%)
 Strand = Plus / Minus

                                                                            
Query: 17       ttactatatttagtacaattgttatatgacacatgcnnnnnnnnatagggaaactacgtc 76
                ||||||||||||||| |||||||||||||||||||         || ||  |||||||||
Sbjct: 18254847 ttactatatttagtagaattgttatatgacacatggttttatttatgggagaactacgtc 18254788

                                                                            
Query: 77       ctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggctttagtaa 136
                |||||||  ||||||||||||| |||||||||||||||||| |||||||||||||||| |
Sbjct: 18254787 ctcgagcctgaggtctgaatttattcataatagtactcctattgacttcggctttagtga 18254728

                                                                            
Query: 137      tgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataaa 196
                |||| ||||| ||||||||||||||| |||||||||| |||||||| |||||||||||||
Sbjct: 18254727 tgaacaaatttgctttgtcgaaatccttataatgagtagcatttgctgctgccgaataaa 18254668

                                                                            
Query: 197      ccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataacagttt 256
                ||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||
Sbjct: 18254667 ccaactttaagatgggataagatgctcgataaggcatgaggtttaatatcataacagttt 18254608

                                                                            
Query: 257      cctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaacagacatag 316
                | |||||||||| ||| | |||||| || | |||||||||| |||||||||| |||||  
Sbjct: 18254607 cttcgtagtaacaccaacaaatctcatccataactctttgtactttgaaaacggacatgt 18254548

                                                                            
Query: 317      ggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcggttgg--aac 374
                ||||  ||||| ||||||||||||  | |||| ||||||||||||||||||||||   ||
Sbjct: 18254547 ggatgtgttttcgtgctttgaaaa--ccctcgtacttaagtagacgatcggttggtatac 18254490

                                                                            
Query: 375      tttccttgcgagtttccttagcccacttttcttcttctttatcctagggatatactttac 434
                ||| |||  ||||||| || ||||||| ||||||||||||||||||||| ||||||||| 
Sbjct: 18254489 ttttcttctgagtttctttggcccactcttcttcttctttatcctaggggtatactttaa 18254430

                                                           
Query: 435      tagtttgaaacttgtcataaataagtttattccccgcctacct 477
                 |||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 18254429 cagtttgaaacttgtcataaataagattattccccgcttacct 18254387



 Score =  168 bits (85), Expect = 1e-38
 Identities = 106/113 (93%)
 Strand = Plus / Plus

                                                                            
Query: 509      aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
                ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 11411802 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 11411861

                                                                     
Query: 569      aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 621
                ||||||| ||||||||||| || |||||||| |||||||||||||||| ||||
Sbjct: 11411862 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctatcata 11411914

---

>emb|AL831799.3|CNS08CAC Oryza sativa chromosome 12, . BAC OSJNBa0087A02 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 177034

 Score =  462 bits (233), Expect = e-127
 Identities = 405/463 (87%), Gaps = 4/463 (0%)
 Strand = Plus / Plus

                                                                         
Query: 17    ttactatatttagtacaattgttatatgacacatgcnnnnnnnnatagggaaactacgtc 76
             ||||||||||||||| |||||||||||||||||||         || ||  |||||||||
Sbjct: 42468 ttactatatttagtagaattgttatatgacacatggttttatttatgggagaactacgtc 42527

                                                                         
Query: 77    ctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggctttagtaa 136
             |||||||  ||||||||||||| |||||||||||||||||| |||||||||||||||| |
Sbjct: 42528 ctcgagcctgaggtctgaatttattcataatagtactcctattgacttcggctttagtga 42587

                                                                         
Query: 137   tgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataaa 196
             |||| ||||| ||||||||||||||| |||||||||| |||||||| |||||||||||||
Sbjct: 42588 tgaacaaatttgctttgtcgaaatccttataatgagtagcatttgctgctgccgaataaa 42647

                                                                         
Query: 197   ccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataacagttt 256
             ||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||
Sbjct: 42648 ccaactttaagatgggataagatgctcgataaggcatgaggtttaatatcataacagttt 42707

                                                                         
Query: 257   cctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaacagacatag 316
             | |||||||||| ||| | |||||| || | |||||||||| |||||||||| |||||  
Sbjct: 42708 cttcgtagtaacaccaacaaatctcatccataactctttgtactttgaaaacggacatgt 42767

                                                                         
Query: 317   ggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcggttgg--aac 374
             ||||  ||||| ||||||||||||  | |||| ||||||||||||||||||||||   ||
Sbjct: 42768 ggatgtgttttcgtgctttgaaaa--ccctcgtacttaagtagacgatcggttggtatac 42825

                                                                         
Query: 375   tttccttgcgagtttccttagcccacttttcttcttctttatcctagggatatactttac 434
             ||| |||  ||||||| || ||||||| ||||||||||||||||||||| ||||||||| 
Sbjct: 42826 ttttcttctgagtttctttggcccactcttcttcttctttatcctaggggtatactttaa 42885

                                                        
Query: 435   tagtttgaaacttgtcataaataagtttattccccgcctacct 477
              |||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 42886 cagtttgaaacttgtcataaataagattattccccgcttacct 42928

---

>gb|DQ113925.1| Calamagrostis breweri isolate X17 trnH-psbA intergenic spacer,
           complete sequence; chloroplast
          Length = 598

 Score =  202 bits (102), Expect = 1e-48
 Identities = 111/114 (97%)
 Strand = Plus / Plus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcattttcat 186

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 187 aactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 240

---

>gb|DQ113924.1| Calamagrostis breweri isolate RMP0198 trnH-psbA intergenic spacer,
           complete sequence; chloroplast
          Length = 598

 Score =  202 bits (102), Expect = 1e-48
 Identities = 111/114 (97%)
 Strand = Plus / Plus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcattttcat 186

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 187 aactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 240

---

>gb|DQ113923.1| Calamagrostis breweri isolate BW8259 trnH-psbA intergenic spacer,
           complete sequence; chloroplast
          Length = 598

 Score =  202 bits (102), Expect = 1e-48
 Identities = 111/114 (97%)
 Strand = Plus / Plus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcattttcat 186

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 187 aactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 240

---

>gb|DQ113922.1| Calamagrostis breweri isolate RMP0007 trnH-psbA intergenic spacer,
           complete sequence; chloroplast
          Length = 598

 Score =  202 bits (102), Expect = 1e-48
 Identities = 111/114 (97%)
 Strand = Plus / Plus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcattttcat 186

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 187 aactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 240

---

>gb|DQ113921.1| Calamagrostis muiriana isolate B4 trnH-psbA intergenic spacer,
           complete sequence; chloroplast
          Length = 598

 Score =  202 bits (102), Expect = 1e-48
 Identities = 111/114 (97%)
 Strand = Plus / Plus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcattttcat 186

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 187 aactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 240

---

>gb|DQ113920.1| Calamagrostis muiriana isolate B3 trnH-psbA intergenic spacer,
           complete sequence; chloroplast
          Length = 598

 Score =  202 bits (102), Expect = 1e-48
 Identities = 111/114 (97%)
 Strand = Plus / Plus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcattttcat 186

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 187 aactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 240

---

>gb|DQ113919.1| Calamagrostis muiriana isolate B1 trnH-psbA intergenic spacer,
           complete sequence; chloroplast
          Length = 597

 Score =  202 bits (102), Expect = 1e-48
 Identities = 111/114 (97%)
 Strand = Plus / Plus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcattttcat 186

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 187 aactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 240

---

>gb|DQ113918.1| Calamagrostis muiriana isolate A7 trnH-psbA intergenic spacer,
           complete sequence; chloroplast
          Length = 598

 Score =  202 bits (102), Expect = 1e-48
 Identities = 111/114 (97%)
 Strand = Plus / Plus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcattttcat 186

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 187 aactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 240

---

>gb|DQ113917.1| Calamagrostis muiriana isolate A1 trnH-psbA intergenic spacer,
           complete sequence; chloroplast
          Length = 598

 Score =  202 bits (102), Expect = 1e-48
 Identities = 111/114 (97%)
 Strand = Plus / Plus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcattttcat 186

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 187 aactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 240

---

>gb|DQ369760.1| Festuca rubra isolate 3 PsbA (psbA) gene, partial cds; and
           psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 633

 Score =  202 bits (102), Expect = 1e-48
 Identities = 111/114 (97%)
 Strand = Plus / Plus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcattttcat 220

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 221 aactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 274

---

>gb|DQ369756.1| Festuca arizonica isolate 1 PsbA (psbA) gene, partial cds; and
           psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 633

 Score =  202 bits (102), Expect = 1e-48
 Identities = 111/114 (97%)
 Strand = Plus / Plus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcattttcat 220

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 221 aactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 274

---

>emb|X13327.1|CHSCPSBA Secale cereale chloroplast psbA gene for herbicide-binding protein D1
          Length = 2729

 Score =  196 bits (99), Expect = 6e-47
 Identities = 118/124 (95%), Gaps = 4/124 (3%)
 Strand = Plus / Plus

                                                                        
Query: 503  cttcttaatctttctattcagaat----tcagttaacgacgagatttagtatcctttctt 558
            ||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||
Sbjct: 2411 cttcttaatctttctattcagaatctgatcagttaacgacgagatttagtatcctttctt 2470

                                                                        
Query: 559  gcattttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctacc 618
            ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 2471 gcattttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctacc 2530

                
Query: 619  atag 622
            ||||
Sbjct: 2531 atag 2534

---

>gb|AY016310.1| Phragmites australis trnH-psbA intergenic spacer, chloroplast
           sequence
          Length = 585

 Score =  196 bits (99), Expect = 6e-47
 Identities = 114/119 (95%)
 Strand = Plus / Minus

                                                                       
Query: 504 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 563
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 448 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 389

                                                                      
Query: 564 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 388 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 330

---

>gb|AY769149.1| Paspalum vaginatum psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 535

 Score =  196 bits (99), Expect = 6e-47
 Identities = 114/119 (95%)
 Strand = Plus / Minus

                                                                       
Query: 504 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 563
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 436 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 377

                                                                      
Query: 564 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 376 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 318

---

>gb|AY769148.1| Paspalum urvillei psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 546

 Score =  196 bits (99), Expect = 6e-47
 Identities = 114/119 (95%)
 Strand = Plus / Minus

                                                                       
Query: 504 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 563
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 447 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 388

                                                                      
Query: 564 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 387 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 329

---

>gb|AY769147.1| Paspalum subciliatum psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 537

 Score =  196 bits (99), Expect = 6e-47
 Identities = 114/119 (95%)
 Strand = Plus / Minus

                                                                       
Query: 504 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 563
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 437 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 378

                                                                      
Query: 564 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 377 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 319

---

>gb|AY769146.1| Paspalum ramboi psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 537

 Score =  196 bits (99), Expect = 6e-47
 Identities = 114/119 (95%)
 Strand = Plus / Minus

                                                                       
Query: 504 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 563
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 437 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 378

                                                                      
Query: 564 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 377 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 319

---

>gb|AY769141.1| Paspalum minus psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 537

 Score =  196 bits (99), Expect = 6e-47
 Identities = 114/119 (95%)
 Strand = Plus / Minus

                                                                       
Query: 504 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 563
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 437 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 378

                                                                      
Query: 564 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 377 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 319

---

>gb|AY769139.1| Paspalum lividum psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 523

 Score =  196 bits (99), Expect = 6e-47
 Identities = 114/119 (95%)
 Strand = Plus / Minus

                                                                       
Query: 504 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 563
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 420 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 361

                                                                      
Query: 564 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 360 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 302

---

>gb|AY769138.1| Paspalum lineare psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 536

 Score =  196 bits (99), Expect = 6e-47
 Identities = 114/119 (95%)
 Strand = Plus / Minus

                                                                       
Query: 504 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 563
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 437 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 378

                                                                      
Query: 564 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 377 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 319

---

>gb|AY769137.1| Paspalum juergensii psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 540

 Score =  196 bits (99), Expect = 6e-47
 Identities = 114/119 (95%)
 Strand = Plus / Minus

                                                                       
Query: 504 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 563
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 444 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 385

                                                                      
Query: 564 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 384 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 326

---

>gb|AY769136.1| Paspalum ionanthum psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 537

 Score =  196 bits (99), Expect = 6e-47
 Identities = 114/119 (95%)
 Strand = Plus / Minus

                                                                       
Query: 504 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 563
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 437 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 378

                                                                      
Query: 564 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 377 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 319

---

>gb|AY769135.1| Paspalum intermedium psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 535

 Score =  196 bits (99), Expect = 6e-47
 Identities = 114/119 (95%)
 Strand = Plus / Minus

                                                                       
Query: 504 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 563
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 436 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 377

                                                                      
Query: 564 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 376 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 318

---

>gb|AY769134.1| Paspalum flaccidum psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 537

 Score =  196 bits (99), Expect = 6e-47
 Identities = 114/119 (95%)
 Strand = Plus / Minus

                                                                       
Query: 504 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 563
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 437 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 378

                                                                      
Query: 564 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 377 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 319

---

>gb|AY769133.1| Paspalum filifolium psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 535

 Score =  196 bits (99), Expect = 6e-47
 Identities = 114/119 (95%)
 Strand = Plus / Minus

                                                                       
Query: 504 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 563
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 435 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 376

                                                                      
Query: 564 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 375 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 317

---

>gb|AY769132.1| Paspalum equitans psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 537

 Score =  196 bits (99), Expect = 6e-47
 Identities = 114/119 (95%)
 Strand = Plus / Minus

                                                                       
Query: 504 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 563
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 437 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 378

                                                                      
Query: 564 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 377 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 319

---

>gb|AY769130.1| Paspalum dilatatum psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 508

 Score =  196 bits (99), Expect = 6e-47
 Identities = 114/119 (95%)
 Strand = Plus / Minus

                                                                       
Query: 504 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 563
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 408 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 349

                                                                      
Query: 564 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 348 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 290

---

>gb|AY769128.1| Paspalum dasypleurum psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 535

 Score =  196 bits (99), Expect = 6e-47
 Identities = 114/119 (95%)
 Strand = Plus / Minus

                                                                       
Query: 504 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 563
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 437 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 378

                                                                      
Query: 564 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 377 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 319

---

>gb|AY769127.1| Paspalum cromyorhizon psbA-trnH intergenic spacer, partial
           sequence; chloroplast
          Length = 537

 Score =  196 bits (99), Expect = 6e-47
 Identities = 114/119 (95%)
 Strand = Plus / Minus

                                                                       
Query: 504 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 563
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 437 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 378

                                                                      
Query: 564 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 377 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 319

---

>gb|AY769126.1| Paspalum conduplicatum psbA-trnH intergenic spacer, partial
           sequence; chloroplast
          Length = 537

 Score =  196 bits (99), Expect = 6e-47
 Identities = 114/119 (95%)
 Strand = Plus / Minus

                                                                       
Query: 504 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 563
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 437 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 378

                                                                      
Query: 564 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 377 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 319

---

>gb|AY769124.1| Paspalum almum psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 537

 Score =  196 bits (99), Expect = 6e-47
 Identities = 114/119 (95%)
 Strand = Plus / Minus

                                                                       
Query: 504 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 563
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 437 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 378

                                                                      
Query: 564 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 377 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 319

---

>gb|AY769123.1| Paspalum acuminatum psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 538

 Score =  196 bits (99), Expect = 6e-47
 Identities = 114/119 (95%)
 Strand = Plus / Minus

                                                                       
Query: 504 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 563
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 438 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 379

                                                                      
Query: 564 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 378 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 320

---

>gb|AY769122.1| Thrasya petrosa psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 479

 Score =  196 bits (99), Expect = 6e-47
 Identities = 114/119 (95%)
 Strand = Plus / Minus

                                                                       
Query: 504 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 563
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 408 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 349

                                                                      
Query: 564 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 348 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 290

---

>gb|AY941127.1| Paspalum quadrifarium psbA-trnH intergenic spacer, partial
           sequence; and rpl19 gene, complete cds; chloroplast
          Length = 494

 Score =  196 bits (99), Expect = 6e-47
 Identities = 114/119 (95%)
 Strand = Plus / Minus

                                                                       
Query: 504 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 563
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 407 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 348

                                                                      
Query: 564 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 347 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 289

---

>gb|AY941126.1| Paspalum exaltatum psbA-trnH intergenic spacer, partial sequence;
           and rpl19 gene, complete cds; chloroplast
          Length = 494

 Score =  196 bits (99), Expect = 6e-47
 Identities = 114/119 (95%)
 Strand = Plus / Minus

                                                                       
Query: 504 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 563
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 407 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 348

                                                                      
Query: 564 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 347 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 289

---

>gb|AY941125.1| Paspalum quarinii psbA-trnH intergenic spacer, partial sequence;
           and rpl19 gene, complete cds; chloroplast
          Length = 494

 Score =  196 bits (99), Expect = 6e-47
 Identities = 114/119 (95%)
 Strand = Plus / Minus

                                                                       
Query: 504 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 563
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 407 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 348

                                                                      
Query: 564 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 347 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 289

---

>gb|AY941123.1| Paspalum quadrifarium psbA-trnH intergenic spacer, partial
           sequence; and rpl19 gene, complete cds; chloroplast
          Length = 494

 Score =  196 bits (99), Expect = 6e-47
 Identities = 114/119 (95%)
 Strand = Plus / Minus

                                                                       
Query: 504 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 563
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 407 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 348

                                                                      
Query: 564 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 347 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 289

---

>gb|AY941122.1| Paspalum rufum psbA-trnH intergenic spacer, partial sequence; and
           rpl19 gene, complete cds; chloroplast
          Length = 494

 Score =  196 bits (99), Expect = 6e-47
 Identities = 114/119 (95%)
 Strand = Plus / Minus

                                                                       
Query: 504 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 563
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 407 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 348

                                                                      
Query: 564 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 347 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 289

---

>gb|AY941121.1| Paspalum intermedium psbA-trnH intergenic spacer, partial sequence;
           and rpl19 gene, complete cds; chloroplast
          Length = 494

 Score =  196 bits (99), Expect = 6e-47
 Identities = 114/119 (95%)
 Strand = Plus / Minus

                                                                       
Query: 504 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 563
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 407 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 348

                                                                      
Query: 564 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 347 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 289

---

>gb|AY941120.1| Paspalum haumanii psbA-trnH intergenic spacer, partial sequence;
           and rpl19 gene, complete cds; chloroplast
          Length = 494

 Score =  196 bits (99), Expect = 6e-47
 Identities = 114/119 (95%)
 Strand = Plus / Minus

                                                                       
Query: 504 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 563
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 407 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 348

                                                                      
Query: 564 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 347 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 289

---

>gb|DQ006214.1| Chasmanthium latifolium voucher Wells 4431 US PsbA (psbA) gene,
           partial cds; psbA-trnH intergenic spacer, complete
           sequence; and tRNA-His (trnH) gene, partial sequence;
           chloroplast
          Length = 612

 Score =  196 bits (99), Expect = 6e-47
 Identities = 114/119 (95%)
 Strand = Plus / Plus

                                                                       
Query: 504 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 563
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 147 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 206

                                                                      
Query: 564 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 207 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 265

---

>dbj|AB128634.1| Oryza granulata chloroplast DNA, containing SSR region (RCt12),
           strain:W0022
          Length = 332

 Score =  194 bits (98), Expect = 2e-46
 Identities = 110/114 (96%)
 Strand = Plus / Minus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 53

---

>dbj|AB128633.1| Oryza granulata chloroplast DNA, containing SSR region (RCt12),
           strain:W0067
          Length = 332

 Score =  194 bits (98), Expect = 2e-46
 Identities = 110/114 (96%)
 Strand = Plus / Minus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 53

---

>gb|AY769145.1| Paspalum pumilum psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 536

 Score =  188 bits (95), Expect = 1e-44
 Identities = 113/119 (94%)
 Strand = Plus / Minus

                                                                       
Query: 504 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 563
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 437 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 378

                                                                      
Query: 564 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           |||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct: 377 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacccaccatag 319

---

>gb|AY769143.1| Paspalum pallens psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 542

 Score =  188 bits (95), Expect = 1e-44
 Identities = 113/119 (94%)
 Strand = Plus / Minus

                                                                       
Query: 504 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 563
           |||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |
Sbjct: 437 ttctgaatctttctattctgaattcagttaacgacgggatttagtatcctttcttgcact 378

                                                                      
Query: 564 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 377 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 319

---

>gb|AY769142.1| Paspalum notatum psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 537

 Score =  188 bits (95), Expect = 1e-44
 Identities = 113/119 (94%)
 Strand = Plus / Minus

                                                                       
Query: 504 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 563
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 437 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 378

                                                                      
Query: 564 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           |||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 377 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttacgacctaccatag 319

---

>gb|DQ006178.1| Cyperus erythrorhizos voucher Wells 4458 US PsbA (psbA) gene,
           partial cds; psbA-trnH intergenic spacer, complete
           sequence; and tRNA-His (trnH) gene, partial sequence;
           chloroplast
          Length = 612

 Score =  188 bits (95), Expect = 1e-44
 Identities = 113/119 (94%)
 Strand = Plus / Plus

                                                                       
Query: 504 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 563
           |||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 148 ttctgaatgtttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 207

                                                                      
Query: 564 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 208 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 266

---

>dbj|AB128631.1| Oryza ridleyi chloroplast DNA, containing SSR region (RCt12),
           strain:W0001
          Length = 333

 Score =  186 bits (94), Expect = 6e-44
 Identities = 109/114 (95%)
 Strand = Plus / Minus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgacgagtaggcacgaattcccccaatttgcgacctaccatag 53

---

>dbj|AB128630.1| Oryza longiglumis chloroplast DNA, containing SSR region (RCt12),
           strain:W1220
          Length = 333

 Score =  186 bits (94), Expect = 6e-44
 Identities = 109/114 (95%)
 Strand = Plus / Minus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgacgagtaggcacgaattcccccaatttgcgacctaccatag 53

---

>dbj|AB128629.1| Oryza ridleyi chloroplast DNA, containing SSR region (RCt12),
           strain:W0604
          Length = 333

 Score =  186 bits (94), Expect = 6e-44
 Identities = 109/114 (95%)
 Strand = Plus / Minus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgacgagtaggcacgaattcccccaatttgcgacctaccatag 53

---

>dbj|AB128628.1| Oryza longiglumis chloroplast DNA, containing SSR region (RCt12),
           strain:W1228
          Length = 333

 Score =  186 bits (94), Expect = 6e-44
 Identities = 109/114 (95%)
 Strand = Plus / Minus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgacgagtaggcacgaattcccccaatttgcgacctaccatag 53

---

>gb|DQ369792.1| Festuca occidentalis isolate 17 PsbA (psbA) gene, partial cds; and
           psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 627

 Score =  184 bits (93), Expect = 2e-43
 Identities = 102/105 (97%)
 Strand = Plus / Plus

                                                                       
Query: 518 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 577
           |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 174 attctgaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtga 233

                                                        
Query: 578 aatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 234 aatgccgagtaggcacgaattcccccaatttgcgacctaccatag 278

---

>gb|DQ369758.1| Festuca valesiaca isolate 2 PsbA (psbA) gene, partial cds; and
           psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 638

 Score =  184 bits (93), Expect = 2e-43
 Identities = 102/105 (97%)
 Strand = Plus / Plus

                                                                       
Query: 518 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 577
           |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 175 attctgaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtga 234

                                                        
Query: 578 aatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcgacctaccatag 279

---

>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome
          Length = 569630

 Score =  182 bits (92), Expect = 9e-43
 Identities = 119/128 (92%)
 Strand = Plus / Plus

                                                                          
Query: 146    tcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataaaccaacttta 205
              |||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||
Sbjct: 212531 tcgctttgtcgaaatccctataatgaatagcatttgctgctgccgaataaaccaacttta 212590

                                                                          
Query: 206    agatgggataagatgctcgatagggcatgaggttcagtatcataacagtttcctcgtagt 265
              |||||||||||||||||| ||| ||||||||| ||||||||||||| |||||||| ||||
Sbjct: 212591 agatgggataagatgctcaataaggcatgagggtcagtatcataacggtttcctcctagt 212650

                      
Query: 266    aacgccac 273
              || |||||
Sbjct: 212651 aaggccac 212658

---

>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete
              genome
          Length = 701046

 Score =  182 bits (92), Expect = 9e-43
 Identities = 119/128 (92%)
 Strand = Plus / Plus

                                                                          
Query: 146    tcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataaaccaacttta 205
              |||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||
Sbjct: 553553 tcgctttgtcgaaatccctataatgaatagcatttgctgctgccgaataaaccaacttta 553612

                                                                          
Query: 206    agatgggataagatgctcgatagggcatgaggttcagtatcataacagtttcctcgtagt 265
              |||||||||||||||||| ||| ||||||||| ||||||||||||| |||||||| ||||
Sbjct: 553613 agatgggataagatgctcaataaggcatgagggtcagtatcataacggtttcctcctagt 553672

                      
Query: 266    aacgccac 273
              || |||||
Sbjct: 553673 aaggccac 553680

---

>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome
          Length = 569553

 Score =  182 bits (92), Expect = 9e-43
 Identities = 119/128 (92%)
 Strand = Plus / Plus

                                                                          
Query: 146    tcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataaaccaacttta 205
              |||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||
Sbjct: 456830 tcgctttgtcgaaatccctataatgaatagcatttgctgctgccgaataaaccaacttta 456889

                                                                          
Query: 206    agatgggataagatgctcgatagggcatgaggttcagtatcataacagtttcctcgtagt 265
              |||||||||||||||||| ||| ||||||||| ||||||||||||| |||||||| ||||
Sbjct: 456890 agatgggataagatgctcaataaggcatgagggtcagtatcataacggtttcctcctagt 456949

                      
Query: 266    aacgccac 273
              || |||||
Sbjct: 456950 aaggccac 456957

---

>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome
          Length = 535825

 Score =  182 bits (92), Expect = 9e-43
 Identities = 119/128 (92%)
 Strand = Plus / Plus

                                                                          
Query: 146    tcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataaaccaacttta 205
              |||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||
Sbjct: 230065 tcgctttgtcgaaatccctataatgaatagcatttgctgctgccgaataaaccaacttta 230124

                                                                          
Query: 206    agatgggataagatgctcgatagggcatgaggttcagtatcataacagtttcctcgtagt 265
              |||||||||||||||||| ||| ||||||||| ||||||||||||| |||||||| ||||
Sbjct: 230125 agatgggataagatgctcaataaggcatgagggtcagtatcataacggtttcctcctagt 230184

                      
Query: 266    aacgccac 273
              || |||||
Sbjct: 230185 aaggccac 230192

---

>gb|AY769140.1| Paspalum maculosum psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 538

 Score =  182 bits (92), Expect = 9e-43
 Identities = 114/120 (95%), Gaps = 1/120 (0%)
 Strand = Plus / Minus

                                                                       
Query: 504 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttg-cat 562
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| || 
Sbjct: 438 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttggcac 379

                                                                       
Query: 563 tttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 378 tttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 319

---

>gb|AY769131.1| Paspalum ellipticum psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 535

 Score =  182 bits (92), Expect = 9e-43
 Identities = 114/120 (95%), Gaps = 1/120 (0%)
 Strand = Plus / Minus

                                                                       
Query: 504 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttg-cat 562
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| || 
Sbjct: 438 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttggcac 379

                                                                       
Query: 563 tttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 378 tttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 319

---

>gb|DQ369762.1| Festuca rubra isolate 4 PsbA (psbA) gene, partial cds; and
           psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 633

 Score =  182 bits (92), Expect = 9e-43
 Identities = 98/100 (98%)
 Strand = Plus / Plus

                                                                       
Query: 523 gaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgc 582
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 175 gaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtgaaatgc 234

                                                   
Query: 583 cgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 235 cgagtaggcacgaattcccccaatttgcgacctaccatag 274

---

>emb|Y00141.1|CHZMRP19 Maize chloroplast rps19 gene for ribosomal protein S19
          Length = 411

 Score =  180 bits (91), Expect = 4e-42
 Identities = 112/119 (94%)
 Strand = Plus / Minus

                                                                       
Query: 504 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 563
           |||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||| | |
Sbjct: 337 ttctgaatctttctattctgaattcaattaacgacgagatttagtatcctttcttgtact 278

                                                                      
Query: 564 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 277 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 219



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 43/45 (95%)
 Strand = Plus / Minus

                                                        
Query: 444 acttgtcataaataagtttattccccgcctacctttactttattt 488
           |||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 411 acttgtcataaataaggttattacccgcctacctttactttattt 367

---

>gb|AY941124.1| Axonopus rosengurttii psbA-trnH intergenic spacer, partial
           sequence; and rpl19 gene, complete cds; chloroplast
          Length = 494

 Score =  180 bits (91), Expect = 4e-42
 Identities = 112/119 (94%)
 Strand = Plus / Minus

                                                                       
Query: 504 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 563
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 407 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 348

                                                                      
Query: 564 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           |||||||||||| ||||||||||||||||||||||| || |||||||| ||||||||||
Sbjct: 347 ttcataactcgtgaaatgccgagtaggcacgaattcccctaatttgcgccctaccatag 289

---

>gb|DQ006213.1| Arthraxon hispidus voucher Wells 5171 US PsbA (psbA) gene, partial
           cds; psbA-trnH intergenic spacer, complete sequence; and
           tRNA-His (trnH) gene, partial sequence; chloroplast
          Length = 614

 Score =  180 bits (91), Expect = 4e-42
 Identities = 112/119 (94%)
 Strand = Plus / Plus

                                                                       
Query: 504 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 563
           |||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||| | |
Sbjct: 150 ttctgaatctttctattctgaattcaattaacgacgagatttagtatcctttcttgtact 209

                                                                      
Query: 564 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 210 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 268

---

>emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022F23,
             complete sequence
          Length = 130273

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Plus

                                                                         
Query: 509   aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 72135 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 72194

                                                                   
Query: 569   aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
             ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 72195 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 72248

---

>gb|AF527485.1| Chloroplast transformation vector pVSR326, complete sequence
          Length = 9152

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Plus

                                                                        
Query: 509  aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 4117 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 4176

                                                                  
Query: 569  aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
            ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 4177 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 4230

---

>gb|AC025783.10| Oryza sativa chromosome 10 BAC OSJNBa0001O14 genomic sequence, complete
             sequence
          Length = 178022

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Plus

                                                                         
Query: 509   aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 79013 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 79072

                                                                   
Query: 569   aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
             ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 79073 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 79126

---

>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from
             chromosome 10, complete sequence
          Length = 134933

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                         
Query: 509   aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 73206 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 73147

                                                                   
Query: 569   aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
             ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 73146 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 73093

---

>dbj|AB128665.1| Oryza nivara chloroplast DNA, containing SSR region (RCt12),
           strain:SL10
          Length = 335

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 53

---

>dbj|AB128664.1| Oryza eichingeri chloroplast DNA, containing SSR region (RCt12),
           strain:2001-SL8
          Length = 337

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 53

---

>dbj|AB128663.1| Oryza rhizomatis chloroplast DNA, containing SSR region (RCt12),
           strain:2001-SL3
          Length = 338

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 53

---

>dbj|AB128662.1| Oryza alta chloroplast DNA, containing SSR region (RCt12),
           strain:105138
          Length = 335

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 53

---

>dbj|AB128661.1| Oryza punctata chloroplast DNA, containing SSR region (RCt12),
           strain:104154
          Length = 333

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 53

---

>dbj|AB128660.1| Oryza glumipatula chloroplast DNA, containing SSR region (RCt12),
           strain:W2199
          Length = 336

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 53

---

>dbj|AB128659.1| Oryza glumipatula chloroplast DNA, containing SSR region (RCt12),
           strain:103812
          Length = 334

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 53

---

>dbj|AB128658.1| Oryza punctata chloroplast DNA, containing SSR region (RCt12),
           strain:103887
          Length = 333

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 53

---

>dbj|AB128656.1| Oryza australiensis chloroplast DNA, containing SSR region (RCt12),
           strain:105267
          Length = 338

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 53

---

>dbj|AB128655.1| Oryza australiensis chloroplast DNA, containing SSR region (RCt12),
           strain:103318
          Length = 338

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 53

---

>dbj|AB128654.1| Oryza australiensis chloroplast DNA, containing SSR region (RCt12),
           strain:101410
          Length = 338

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 53

---

>dbj|AB128653.1| Oryza australiensis chloroplast DNA, containing SSR region (RCt12),
           strain:101397
          Length = 338

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 53

---

>dbj|AB128652.1| Oryza meridionalis chloroplast DNA, containing SSR region (RCt12),
           strain:W1635
          Length = 336

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 53

---

>dbj|AB128651.1| Oryza meridionalis chloroplast DNA, containing SSR region (RCt12),
           strain:W1625
          Length = 334

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 53

---

>dbj|AB128650.1| Oryza punctata chloroplast DNA, containing SSR region (RCt12),
           strain:W1514
          Length = 333

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 53

---

>dbj|AB128649.1| Oryza glumipatula chloroplast DNA, containing SSR region (RCt12),
           strain:W1169
          Length = 334

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 53

---

>dbj|AB128648.1| Oryza barthii chloroplast DNA, containing SSR region (RCt12),
           strain:W0652
          Length = 335

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 53

---

>dbj|AB128647.1| Oryza rufipogon chloroplast DNA, containing SSR region (RCt12),
           strain:W0120
          Length = 336

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 53

---

>dbj|AB128646.1| Oryza longistaminata chloroplast DNA, containing SSR region
           (RCt12), strain:W1499
          Length = 337

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 53

---

>dbj|AB128645.1| Oryza glumipatula chloroplast DNA, containing SSR region (RCt12),
           strain:W1183
          Length = 336

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 53

---

>dbj|AB128644.1| Oryza rufipogon chloroplast DNA, containing SSR region (RCt12),
           strain:W2078
          Length = 334

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 53

---

>dbj|AB128643.1| Oryza longistaminata chloroplast DNA, containing SSR region
           (RCt12), strain:W1421
          Length = 337

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 53

---

>dbj|AB128642.1| Oryza rufipogon chloroplast DNA, containing SSR region (RCt12),
           strain:W2099
          Length = 334

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 53

---

>dbj|AB128641.1| Oryza longistaminata chloroplast DNA, containing SSR region
           (RCt12), strain:W1650
          Length = 337

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 53

---

>dbj|AB128640.1| Oryza sativa chloroplast DNA, containing SSR region (RCt12)
          Length = 336

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 53

---

>dbj|AB128639.1| Oryza rufipogon chloroplast DNA, containing SSR region (RCt12),
           strain:W0157
          Length = 335

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 53

---

>dbj|AB128638.1| Oryza glaberrima chloroplast DNA, containing SSR region (RCt12),
           strain:Tog5923
          Length = 335

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 53

---

>dbj|AB128637.1| Leersia tisserantii chloroplast DNA, containing SSR region (RCt12),
           strain:W1620
          Length = 332

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttcttttctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgacgagtaggcacgaattcccccaatttgcgacctaccatag 53

---

>dbj|AB128636.1| Leersia tisserantii chloroplast DNA, containing SSR region (RCt12),
           strain:W1345
          Length = 332

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttcttttctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgacgagtaggcacgaattcccccaatttgcgacctaccatag 53

---

>dbj|AB128635.1| Oryza latifolia chloroplast DNA, containing SSR region (RCt12),
           strain:W0048
          Length = 338

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 53

---

>dbj|AB128632.1| Oryza australiensis chloroplast DNA, containing SSR region (RCt12),
           strain:W1639
          Length = 338

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 53

---

>dbj|AB128627.1| Oryza grandiglumis chloroplast DNA, containing SSR region (RCt12),
           strain:W1480B
          Length = 335

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 53

---

>dbj|AB128626.1| Oryza alta chloroplast DNA, containing SSR region (RCt12),
           strain:W0018
          Length = 338

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 53

---

>dbj|AB128625.1| Oryza grandiglumis chloroplast DNA, containing SSR region (RCt12),
           strain:W0613
          Length = 335

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 53

---

>dbj|AB128624.1| Oryza punctata chloroplast DNA, containing SSR region (RCt12),
           strain:W1564
          Length = 337

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 53

---

>dbj|AB128623.1| Oryza punctata chloroplast DNA, containing SSR region (RCt12),
           strain:W0043
          Length = 338

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 53

---

>dbj|AB128622.1| Oryza eichingeri chloroplast DNA, containing SSR region (RCt12),
           strain:W1525
          Length = 338

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 53

---

>dbj|AB128621.1| Oryza officinalis chloroplast DNA, containing SSR region (RCt12),
           strain:W0614
          Length = 338

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 53

---

>dbj|AB128620.1| Oryza officinalis chloroplast DNA, containing SSR region (RCt12),
           strain:NIAS WBC6
          Length = 338

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 53

---

>dbj|AB128619.1| Oryza punctata chloroplast DNA, containing SSR region (RCt12),
           strain:W0015
          Length = 338

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 53

---

>dbj|AB128618.1| Oryza minuta chloroplast DNA, containing SSR region (RCt12),
           strain:W1213
          Length = 338

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 53

---

>dbj|AB128617.1| Oryza latifolia chloroplast DNA, containing SSR region (RCt12),
           strain:W1181
          Length = 338

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 53

---

>dbj|AB128616.1| Oryza minuta chloroplast DNA, containing SSR region (RCt12),
           strain:W1337
          Length = 338

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 53

---

>dbj|AB128615.1| Oryza officinalis chloroplast DNA, containing SSR region (RCt12),
           strain:W0002
          Length = 338

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                       
Query: 509 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                                 
Query: 569 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 53

---

>gb|M22826.1|RICCPRPL Oryza sativa chloroplast ribosomal protein (rpL23, rpL2 and rpS190)
            genes, complete cds, ribosomal protein L22 (rpL22) gene,
            5' end, transfer RNA-Ile and -His genes
          Length = 2789

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                        
Query: 509  aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 2613 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 2554

                                                                  
Query: 569  aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
            ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 2553 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 2500



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 56/61 (91%)
 Strand = Plus / Minus

                                                                        
Query: 417  cctagggatatactttactagtttgaaacttgtcataaataagtttattccccgcctacc 476
            ||||||| |||||||||| | |||||||||||||||||||||| ||||||||||| ||||
Sbjct: 2789 cctaggggtatactttaccaatttgaaacttgtcataaataaggttattccccgcttacc 2730

             
Query: 477  t 477
            |
Sbjct: 2729 t 2729

---

>dbj|AP006052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0067K15
          Length = 160162

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                         
Query: 509   aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 76026 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 75967

                                                                   
Query: 569   aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
             ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 75966 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 75913

---

>dbj|AP005483.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1144B06
          Length = 133689

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Plus

                                                                         
Query: 509   aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 15495 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 15554

                                                                   
Query: 569   aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
             ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 15555 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 15608

---

>dbj|AP004662.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0048G02
          Length = 155542

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Plus

                                                                          
Query: 509    aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
              ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 134888 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 134947

                                                                    
Query: 569    aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
              ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 134948 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 135001

---

>dbj|AK059477.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-F01, full
            insert sequence
          Length = 1123

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                        
Query: 509  aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1117 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 1058

                                                                  
Query: 569  aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
            ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 1057 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 1004

---

>gb|L40578.1|RICCPRPM Oryza sativa chloroplast ribosomal protein (rpL23, rpL2 and rpS190)
            genes, complete cds, transfer RNA-Ile and -His genes and
            photosystem II (psbA) gene, 3' end
          Length = 2799

 Score =  178 bits (90), Expect = 1e-41
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                        
Query: 509  aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 2613 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 2554

                                                                  
Query: 569  aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
            ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 2553 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccatag 2500

---

>gb|DQ369790.1| Festuca roemeri isolate 16 PsbA (psbA) gene, partial cds; and
           psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 638

 Score =  176 bits (89), Expect = 6e-41
 Identities = 101/105 (96%)
 Strand = Plus / Plus

                                                                       
Query: 518 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 577
           |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 175 attctgaattcagttaacggcgagatttagtatcctttcttgcattttcataactcgtga 234

                                                        
Query: 578 aatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcgacctaccatag 279

---

>gb|DQ369788.1| Festuca roemeri isolate 15 PsbA (psbA) gene, partial cds; and
           psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 638

 Score =  176 bits (89), Expect = 6e-41
 Identities = 101/105 (96%)
 Strand = Plus / Plus

                                                                       
Query: 518 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 577
           |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 175 attctgaattcagttaacggcgagatttagtatcctttcttgcattttcataactcgtga 234

                                                        
Query: 578 aatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcgacctaccatag 279

---

>gb|DQ369786.1| Festuca roemeri isolate 14 PsbA (psbA) gene, partial cds; and
           psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 638

 Score =  176 bits (89), Expect = 6e-41
 Identities = 101/105 (96%)
 Strand = Plus / Plus

                                                                       
Query: 518 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 577
           |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 175 attctgaattcagttaacggcgagatttagtatcctttcttgcattttcataactcgtga 234

                                                        
Query: 578 aatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcgacctaccatag 279

---

>gb|DQ369784.1| Festuca roemeri isolate 13 PsbA (psbA) gene, partial cds; and
           psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 638

 Score =  176 bits (89), Expect = 6e-41
 Identities = 101/105 (96%)
 Strand = Plus / Plus

                                                                       
Query: 518 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 577
           |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 175 attctgaattcagttaacggcgagatttagtatcctttcttgcattttcataactcgtga 234

                                                        
Query: 578 aatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcgacctaccatag 279

---

>gb|DQ369782.1| Festuca roemeri isolate 12 PsbA (psbA) gene, partial cds; and
           psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 638

 Score =  176 bits (89), Expect = 6e-41
 Identities = 101/105 (96%)
 Strand = Plus / Plus

                                                                       
Query: 518 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 577
           |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 175 attctgaattcagttaacggcgagatttagtatcctttcttgcattttcataactcgtga 234

                                                        
Query: 578 aatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcgacctaccatag 279

---

>gb|DQ369780.1| Festuca roemeri isolate 11 PsbA (psbA) gene, partial cds; and
           psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 638

 Score =  176 bits (89), Expect = 6e-41
 Identities = 101/105 (96%)
 Strand = Plus / Plus

                                                                       
Query: 518 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 577
           |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 175 attctgaattcagttaacggcgagatttagtatcctttcttgcattttcataactcgtga 234

                                                        
Query: 578 aatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcgacctaccatag 279

---

>gb|DQ369778.1| Festuca idahoensis isolate 10 PsbA (psbA) gene, partial cds; and
           psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 638

 Score =  176 bits (89), Expect = 6e-41
 Identities = 101/105 (96%)
 Strand = Plus / Plus

                                                                       
Query: 518 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 577
           |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 175 attctgaattcagttaacggcgagatttagtatcctttcttgcattttcataactcgtga 234

                                                        
Query: 578 aatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcgacctaccatag 279

---

>gb|DQ369776.1| Festuca valesiaca isolate 9 PsbA (psbA) gene, partial cds; and
           psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 638

 Score =  176 bits (89), Expect = 6e-41
 Identities = 101/105 (96%)
 Strand = Plus / Plus

                                                                       
Query: 518 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 577
           |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 175 attctgaattcagttaacgacgagatttagtatcttttcttgcattttcataactcgtga 234

                                                        
Query: 578 aatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcgacctaccatag 279

---

>gb|DQ369774.1| Festuca idahoensis isolate 8 PsbA (psbA) gene, partial cds; and
           psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 638

 Score =  176 bits (89), Expect = 6e-41
 Identities = 101/105 (96%)
 Strand = Plus / Plus

                                                                       
Query: 518 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 577
           |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 175 attctgaattcagttaacggcgagatttagtatcctttcttgcattttcataactcgtga 234

                                                        
Query: 578 aatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcgacctaccatag 279

---

>gb|DQ369772.1| Festuca roemeri isolate 7.2 PsbA (psbA) gene, partial cds; and
           psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 638

 Score =  176 bits (89), Expect = 6e-41
 Identities = 101/105 (96%)
 Strand = Plus / Plus

                                                                       
Query: 518 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 577
           |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 175 attctgaattcagttaacggcgagatttagtatcctttcttgcattttcataactcgtga 234

                                                        
Query: 578 aatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcgacctaccatag 279

---

>gb|DQ369770.1| Festuca idahoensis isolate 7.1 PsbA (psbA) gene, partial cds; and
           psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 638

 Score =  176 bits (89), Expect = 6e-41
 Identities = 101/105 (96%)
 Strand = Plus / Plus

                                                                       
Query: 518 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 577
           |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 175 attctgaattcagttaacggcgagatttagtatcctttcttgcattttcataactcgtga 234

                                                        
Query: 578 aatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcgacctaccatag 279

---

>gb|DQ369768.1| Festuca roemeri isolate 6.2 PsbA (psbA) gene, partial cds; and
           psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 638

 Score =  176 bits (89), Expect = 6e-41
 Identities = 101/105 (96%)
 Strand = Plus / Plus

                                                                       
Query: 518 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 577
           |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 175 attctgaattcagttaacggcgagatttagtatcctttcttgcattttcataactcgtga 234

                                                        
Query: 578 aatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcgacctaccatag 279

---

>gb|DQ369766.1| Festuca idahoensis isolate 6.1 PsbA (psbA) gene, partial cds; and
           psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 638

 Score =  176 bits (89), Expect = 6e-41
 Identities = 101/105 (96%)
 Strand = Plus / Plus

                                                                       
Query: 518 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 577
           |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 175 attctgaattcagttaacggcgagatttagtatcctttcttgcattttcataactcgtga 234

                                                        
Query: 578 aatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcgacctaccatag 279

---

>gb|AY769121.1| Axonopus polystachyus psbA-trnH intergenic spacer, partial
           sequence; chloroplast
          Length = 535

 Score =  172 bits (87), Expect = 9e-40
 Identities = 111/119 (93%)
 Strand = Plus / Minus

                                                                       
Query: 504 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 563
           |||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 436 ttctgaatgtttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 377

                                                                      
Query: 564 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           |||||||||||| ||||||||||||||||||||||| || |||||||| ||||||||||
Sbjct: 376 ttcataactcgtgaaatgccgagtaggcacgaattcccctaatttgcgccctaccatag 318

---

>gb|AY769119.1| Axonopus compressus psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 533

 Score =  172 bits (87), Expect = 9e-40
 Identities = 111/119 (93%)
 Strand = Plus / Minus

                                                                       
Query: 504 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 563
           |||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 438 ttctgaatgtttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 379

                                                                      
Query: 564 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           |||||||||||| ||||||||||||||||||||||| || |||||||| ||||||||||
Sbjct: 378 ttcataactcgtgaaatgccgagtaggcacgaattcccctaatttgcgccctaccatag 320

---

>gb|AY769117.1| Axonopus argentinus psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 535

 Score =  172 bits (87), Expect = 9e-40
 Identities = 111/119 (93%)
 Strand = Plus / Minus

                                                                       
Query: 504 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 563
           |||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 438 ttctgaatgtttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 379

                                                                      
Query: 564 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           |||||||||||| ||||||||||||||||||||||| || |||||||| ||||||||||
Sbjct: 378 ttcataactcgtgaaatgccgagtaggcacgaattcccctaatttgcgccctaccatag 320

---

>gb|AY769129.1| Paspalum dedeccae psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 543

 Score =  168 bits (85), Expect = 1e-38
 Identities = 112/120 (93%), Gaps = 1/120 (0%)
 Strand = Plus / Minus

                                                                       
Query: 504 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 563
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 442 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 383

                                                                       
Query: 564 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatt-tgcgacctaccatag 622
           |||||||||||| ||||||||||||||||||||| | |||||||  ||||||||||||||
Sbjct: 382 ttcataactcgtgaaatgccgagtaggcacgaatncccccaattaagcgacctaccatag 323

---

>gb|DQ369764.1| Festuca idahoensis isolate 5 PsbA (psbA) gene, partial cds; and
           psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 638

 Score =  168 bits (85), Expect = 1e-38
 Identities = 100/105 (95%)
 Strand = Plus / Plus

                                                                       
Query: 518 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 577
           |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 175 attctgaattcagttaacggcgagatttagtatcctttcttgcattttcataactcgtga 234

                                                        
Query: 578 aatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           |||||||||||||||||||||| |||||||||||||| |||||||
Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcgacccaccatag 279

---

>emb|AL732650.5|CNS08C9P Oryza sativa chromosome 12, . BAC OSJNBa0054O08 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 167806

 Score =  168 bits (85), Expect = 1e-38
 Identities = 106/113 (93%)
 Strand = Plus / Minus

                                                                          
Query: 509    aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 568
              ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 124833 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 124774

                                                                   
Query: 569    aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccata 621
              ||||||| ||||||||||| || |||||||| |||||||||||||||| ||||
Sbjct: 124773 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctatcata 124721

---

>gb|AY769144.1| Paspalum pauciciliatum psbA-trnH intergenic spacer, partial
           sequence; chloroplast
          Length = 538

 Score =  159 bits (80), Expect = 1e-35
 Identities = 96/100 (96%), Gaps = 1/100 (1%)
 Strand = Plus / Minus

                                                                       
Query: 523 gaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgc 582
           ||||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 414 gaattcagt-aacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgc 356

                                                   
Query: 583 cgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 355 cgagtaggcacgaattcccccaatttgcgacctaccatag 316

---

>gb|AY769118.1| Axonopus brasiliensis psbA-trnH intergenic spacer, partial
           sequence; chloroplast
          Length = 537

 Score =  159 bits (80), Expect = 1e-35
 Identities = 111/120 (92%), Gaps = 1/120 (0%)
 Strand = Plus / Minus

                                                                       
Query: 504 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttctt-gcat 562
           |||| ||| ||||||||| |||||||||||||||||||||||||||||||||||| ||| 
Sbjct: 441 ttctgaatgtttctattctgaattcagttaacgacgagatttagtatcctttcttggcac 382

                                                                       
Query: 563 tttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||||||||| ||||||||||||||||||||||| || |||||||| ||||||||||
Sbjct: 381 tttcataactcgtgaaatgccgagtaggcacgaattcccctaatttgcgccctaccatag 322

---

>dbj|AB128657.1| Oryza brachyantha chloroplast DNA, containing SSR region (RCt12),
           strain:101232
          Length = 338

 Score =  153 bits (77), Expect = 8e-34
 Identities = 92/97 (94%)
 Strand = Plus / Minus

                                                                       
Query: 526 ttcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccga 585
           |||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||
Sbjct: 149 ttcagttaacgacgagatttagtatcttttcttgcactttcataactcgtgaaatgccga 90

                                                
Query: 586 gtaggcacgaattctcccaatttgcgacctaccatag 622
           |||||||| ||||| ||||||||||||||||||||||
Sbjct: 89  gtaggcacaaattcccccaatttgcgacctaccatag 53

---

>gb|AY769120.1| Axonopus siccus psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 536

 Score =  151 bits (76), Expect = 3e-33
 Identities = 110/120 (91%), Gaps = 1/120 (0%)
 Strand = Plus / Minus

                                                                       
Query: 504 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttg-cat 562
           |||| ||| ||||||||  ||||||||||||||||||||||||||||||||||||| || 
Sbjct: 438 ttctgaatgtttctattttgaattcagttaacgacgagatttagtatcctttcttggcac 379

                                                                       
Query: 563 tttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||||||||| ||||||||||||||||||||||| || |||||||| ||||||||||
Sbjct: 378 tttcataactcgtgaaatgccgagtaggcacgaattcccctaatttgcgccctaccatag 319

---

>emb|AL731585.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0009K15,
             complete sequence
          Length = 185021

 Score =  141 bits (71), Expect = 3e-30
 Identities = 86/91 (94%)
 Strand = Plus / Minus

                                                                         
Query: 191   aataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataa 250
             ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 34272 aataaaccaactttaagatgggataagatgctcgatatggcatgaggttcaatatcataa 34213

                                            
Query: 251   cagtttcctcgtagtaacgccaccgaatctc 281
              |||||| |||||||||||||| ||||||||
Sbjct: 34212 tagtttcttcgtagtaacgccaacgaatctc 34182

---

>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan)
          Length = 156687

 Score =  133 bits (67), Expect = 8e-28
 Identities = 169/203 (83%)
 Strand = Plus / Plus

                                                                         
Query: 67    aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 126
             |||||||||||||||||||||||| | |||||||||| | | |||| || | ||||||||
Sbjct: 86299 aaactacgtcctcgagctcgaggtttcaatttcttcacagtcgtacccccattgacttcg 86358

                                                                         
Query: 127   gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 186
             |||||| |||||| |||||| |||| |  | || || ||| || | | |||||||| |||
Sbjct: 86359 gctttactaatgactaaattggcttcgctggaacccatattataactagcatttgctgct 86418

                                                                         
Query: 187   gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 246
             || ||||||||||| || || ||||||||| ||||||||||||||||||| |  ||||||
Sbjct: 86419 gcagaataaaccaatttcaaaatgggataacatgctcgatagggcatgagttctagtatc 86478

                                    
Query: 247   ataacagtttcctcgtagtaacg 269
             ||||  |||||||| ||| ||||
Sbjct: 86479 ataagcgtttcctcataggaacg 86501

---

>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA
          Length = 155943

 Score =  117 bits (59), Expect = 5e-23
 Identities = 167/203 (82%)
 Strand = Plus / Plus

                                                                         
Query: 67    aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 126
             |||||||||||||||||||||||| | |||||||||| | ||||||  | | ||||||||
Sbjct: 86052 aaactacgtcctcgagctcgaggtttcaatttcttcacagtagtacctccattgacttcg 86111

                                                                         
Query: 127   gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 186
             |||||| |||||| |||||| |||| |  | || || |||  | | | |||||||| |||
Sbjct: 86112 gctttactaatgactaaattggcttcgctggaacccatattgtaactagcatttgctgct 86171

                                                                         
Query: 187   gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 246
             || ||||||| ||| || || ||||||||| ||||||||||||||||||| |  ||||||
Sbjct: 86172 gcagaataaatcaatttcaaaatgggataacatgctcgatagggcatgagttctagtatc 86231

                                    
Query: 247   ataacagtttcctcgtagtaacg 269
             ||||  |||||||| ||| ||||
Sbjct: 86232 ataagcgtttcctcataggaacg 86254

---

>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome
          Length = 155298

 Score =  117 bits (59), Expect = 5e-23
 Identities = 167/203 (82%)
 Strand = Plus / Plus

                                                                         
Query: 67    aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 126
             |||||||||||||||||||||||| | |||||||||| | ||||||    | ||||||||
Sbjct: 85177 aaactacgtcctcgagctcgaggtttcaatttcttcacagtagtaccttcattgacttcg 85236

                                                                         
Query: 127   gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 186
             |||||| |||||| |||||| | || || | || || |||  | | | |||||||| |||
Sbjct: 85237 gctttactaatgactaaattggtttcgttggaacccatattgtaactagcatttgctgct 85296

                                                                         
Query: 187   gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 246
             || ||||||||||| || || ||||||||| ||||||||||||||||||| |  ||||||
Sbjct: 85297 gcagaataaaccaatttcaaaatgggataacatgctcgatagggcatgagttctagtatc 85356

                                    
Query: 247   ataacagtttcctcgtagtaacg 269
             ||||  |||||||| ||| ||||
Sbjct: 85357 ataagcgtttcctcataggaacg 85379

---

>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence
          Length = 155941

 Score =  117 bits (59), Expect = 5e-23
 Identities = 167/203 (82%)
 Strand = Plus / Plus

                                                                         
Query: 67    aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 126
             |||||||||||||||||||||||| | |||||||||| | ||||||  | | ||||||||
Sbjct: 86050 aaactacgtcctcgagctcgaggtttcaatttcttcacagtagtacctccattgacttcg 86109

                                                                         
Query: 127   gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 186
             |||||| |||||| |||||| |||| |  | || || |||  | | | |||||||| |||
Sbjct: 86110 gctttactaatgactaaattggcttcgctggaacccatattgtaactagcatttgctgct 86169

                                                                         
Query: 187   gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 246
             || ||||||| ||| || || ||||||||| ||||||||||||||||||| |  ||||||
Sbjct: 86170 gcagaataaatcaatttcaaaatgggataacatgctcgatagggcatgagttctagtatc 86229

                                    
Query: 247   ataacagtttcctcgtagtaacg 269
             ||||  |||||||| ||| ||||
Sbjct: 86230 ataagcgtttcctcataggaacg 86252

---

>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence
          Length = 155745

 Score =  117 bits (59), Expect = 5e-23
 Identities = 167/203 (82%)
 Strand = Plus / Plus

                                                                         
Query: 67    aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 126
             |||||||||||||||||||||||| | |||||||||| | ||||||  | | ||||||||
Sbjct: 85821 aaactacgtcctcgagctcgaggtttcaatttcttcacagtagtacctccattgacttcg 85880

                                                                         
Query: 127   gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 186
             |||||| |||||| |||||| |||| |  | || || |||  | | | |||||||| |||
Sbjct: 85881 gctttactaatgactaaattggcttcgctggaacccatattgtaactagcatttgctgct 85940

                                                                         
Query: 187   gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 246
             || ||||||||||| || || ||||||||| |||| |||||||||||||| |  ||||||
Sbjct: 85941 gcagaataaaccaatttcaaaatgggataacatgcccgatagggcatgagttctagtatc 86000

                                    
Query: 247   ataacagtttcctcgtagtaacg 269
             ||||  |||||||| ||| ||||
Sbjct: 86001 ataagcgtttcctcataggaacg 86023

---

>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome
          Length = 155312

 Score =  117 bits (59), Expect = 5e-23
 Identities = 167/203 (82%)
 Strand = Plus / Plus

                                                                         
Query: 67    aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 126
             |||||||||||||||||||||||| | |||||||||| | ||||||    | ||||||||
Sbjct: 85189 aaactacgtcctcgagctcgaggtttcaatttcttcacagtagtaccttcattgacttcg 85248

                                                                         
Query: 127   gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 186
             |||||| |||||| |||||| | || || | || || |||  | | | |||||||| |||
Sbjct: 85249 gctttactaatgactaaattggtttcgttggaacccatattgtaactagcatttgctgct 85308

                                                                         
Query: 187   gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 246
             || ||||||||||| || || ||||||||| ||||||||||||||||||| |  ||||||
Sbjct: 85309 gcagaataaaccaatttcaaaatgggataacatgctcgatagggcatgagttctagtatc 85368

                                    
Query: 247   ataacagtttcctcgtagtaacg 269
             ||||  |||||||| ||| ||||
Sbjct: 85369 ataagcgtttcctcataggaacg 85391

---

>gb|AY727185.1| Pseudotrillium rivale psbA-trnH intergenic spacer, partial
           sequence; chloroplast
          Length = 1015

 Score =  111 bits (56), Expect = 3e-21
 Identities = 200/248 (80%)
 Strand = Plus / Plus

                                                                       
Query: 68  aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 127
           |||| ||||||||||||| |||||| || || |||| ||||| || || | ||||||| |
Sbjct: 202 aactccgtcctcgagctctaggtcttaactttttcacaatagcacccccattgacttcag 261

                                                                       
Query: 128 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 187
           ||||| |||| ||||||||| |||  |  ||  ||   | |||||| |||||||  ||||
Sbjct: 262 ctttactaataaataaattcacttccttcaagcccaggttatgagtagcatttgatgctg 321

                                                                       
Query: 188 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 247
           | ||||||||||| || || |||||||||||||| ||||| |||||||| | ||||||||
Sbjct: 322 cagaataaaccaatttcaaaatgggataagatgcccgataaggcatgagttccagtatca 381

                                                                       
Query: 248 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 307
           |||  || ||| | ||| ||||||  |||||||  ||||  |||||| ||||||||||||
Sbjct: 382 taagtgtgtccgcataggaacgcccgcgaatctgatcaattactcttcgtgctttgaaaa 441

                   
Query: 308 cagacata 315
           ||||||||
Sbjct: 442 cagacata 449



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 584 gagtaggcacgaattctcccaatttgcgacctaccata 621
           |||||||| ||||||||||||||||  |||||||||||
Sbjct: 643 gagtaggcgcgaattctcccaatttatgacctaccata 680



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 524 aattcagttaacgacgagatttagtatcctttcttgcat 562
           |||||| |||||||||||||||| |||| || |||||||
Sbjct: 589 aattcaattaacgacgagatttattatcgttccttgcat 627

---

>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome
          Length = 155460

 Score =  109 bits (55), Expect = 1e-20
 Identities = 166/203 (81%)
 Strand = Plus / Plus

                                                                         
Query: 67    aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 126
             |||||||||||||||||||||||| | |||||||||| | ||||||    | ||||||||
Sbjct: 85341 aaactacgtcctcgagctcgaggtttcaatttcttcacagtagtaccttcattgacttcg 85400

                                                                         
Query: 127   gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 186
             |||||| |||||| |||||| | || |  | || || |||  | | | |||||||| |||
Sbjct: 85401 gctttactaatgactaaattggtttcgctggaacccatattgtaactagcatttgctgct 85460

                                                                         
Query: 187   gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 246
             || ||||||||||| || || ||||||||| ||||||||||||||||||| |  ||||||
Sbjct: 85461 gcagaataaaccaatttcaaaatgggataacatgctcgatagggcatgagttctagtatc 85520

                                    
Query: 247   ataacagtttcctcgtagtaacg 269
             ||||  |||||||| ||| ||||
Sbjct: 85521 ataagcgtttcctcataggaacg 85543

---

>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome
          Length = 155461

 Score =  109 bits (55), Expect = 1e-20
 Identities = 166/203 (81%)
 Strand = Plus / Plus

                                                                         
Query: 67    aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 126
             |||||||||||||||||||||||| | |||||||||| | ||||||    | ||||||||
Sbjct: 85338 aaactacgtcctcgagctcgaggtttcaatttcttcacagtagtaccttcattgacttcg 85397

                                                                         
Query: 127   gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 186
             |||||| |||||| |||||| | || |  | || || |||  | | | |||||||| |||
Sbjct: 85398 gctttactaatgactaaattggtttcgctggaacccatattgtaactagcatttgctgct 85457

                                                                         
Query: 187   gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 246
             || ||||||||||| || || ||||||||| ||||||||||||||||||| |  ||||||
Sbjct: 85458 gcagaataaaccaatttcaaaatgggataacatgctcgatagggcatgagttctagtatc 85517

                                    
Query: 247   ataacagtttcctcgtagtaacg 269
             ||||  |||||||| ||| ||||
Sbjct: 85518 ataagcgtttcctcataggaacg 85540

---

>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome
          Length = 155371

 Score =  109 bits (55), Expect = 1e-20
 Identities = 166/203 (81%)
 Strand = Plus / Plus

                                                                         
Query: 67    aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 126
             |||||||||||||||||||||||| | |||||||||| | ||||||    | ||||||||
Sbjct: 85224 aaactacgtcctcgagctcgaggtttcaatttcttcacagtagtaccttcattgacttcg 85283

                                                                         
Query: 127   gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 186
             |||||| |||||| |||||| | || |  | || || |||  | | | |||||||| |||
Sbjct: 85284 gctttactaatgactaaattggtttcgctggaacccatattgtaactagcatttgctgct 85343

                                                                         
Query: 187   gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 246
             || ||||||||||| || || ||||||||| ||||||||||||||||||| |  ||||||
Sbjct: 85344 gcagaataaaccaatttcaaaatgggataacatgctcgatagggcatgagttctagtatc 85403

                                    
Query: 247   ataacagtttcctcgtagtaacg 269
             ||||  |||||||| ||| ||||
Sbjct: 85404 ataagcgtttcctcataggaacg 85426

---

>gb|AY582139.1| Panax ginseng chloroplast, complete genome
          Length = 156318

 Score =  103 bits (52), Expect = 7e-19
 Identities = 151/184 (82%)
 Strand = Plus / Plus

                                                                         
Query: 67    aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 126
             |||||||||||||||||||||||| | ||||||||||  ||||||| |   |||||||| 
Sbjct: 85507 aaactacgtcctcgagctcgaggttttaatttcttcacgatagtaccctcgctgacttca 85566

                                                                         
Query: 127   gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 186
             |||||| |||| | |||||| | || || | ||||| |||  | | | |||||||| |||
Sbjct: 85567 gctttactaataactaaatttgattcgttggaatccatattgtaactagcatttgctgct 85626

                                                                         
Query: 187   gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 246
             || ||||||||||| || || ||||||||| |||||||||| |||||||| |  ||||||
Sbjct: 85627 gcagaataaaccaatttaaaaatgggataacatgctcgataaggcatgagttctagtatc 85686

                 
Query: 247   ataa 250
             ||||
Sbjct: 85687 ataa 85690

---

>gb|DQ006171.1| Commelina communis voucher Wells 4872 US psbA-trnH intergenic
           spacer and tRNA-His (trnH) gene, partial sequence;
           chloroplast
          Length = 770

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 118/141 (83%)
 Strand = Plus / Plus

                                                                       
Query: 175 gcatttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatg 234
           |||||||| ||||| | ||||||||| ||||| |||| ||||||||||||||| ||||| 
Sbjct: 57  gcatttgctgctgcnggataaaccaattttaaaatggtataagatgctcgataaggcata 116

                                                                       
Query: 235 aggttcagtatcataacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctt 294
           || | |||||||||||  |||||||| ||  |||| |  ||||| |  ||||  ||||||
Sbjct: 117 agttccagtatcataagtgtttcctcatacgaacggccgcgaatttgatcaattactctt 176

                                
Query: 295 tgtgctttgaaaacagacata 315
           |||||||||||||||||||||
Sbjct: 177 tgtgctttgaaaacagacata 197



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 535 cgacgagatttagtatcctttcttgcat 562
           |||||||||||| |||| ||||||||||
Sbjct: 343 cgacgagatttattatcgtttcttgcat 370

---

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 67/73 (91%)
 Strand = Plus / Plus

                                                                            
Query: 550      tcctttcttgcattttcataactcgtaaaatgccgagtaggcacgaattctcccaatttg 609
                |||||||||||| ||||||||||||| ||||||||||| || | |||||| |||||||||
Sbjct: 34364792 tcctttcttgcactttcataactcgtgaaatgccgagttggtatgaattcccccaatttg 34364851

                             
Query: 610      cgacctaccatag 622
                |||||||||||||
Sbjct: 34364852 cgacctaccatag 34364864

---

>dbj|AP003260.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0468B07
          Length = 169071

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 67/73 (91%)
 Strand = Plus / Plus

                                                                         
Query: 550   tcctttcttgcattttcataactcgtaaaatgccgagtaggcacgaattctcccaatttg 609
             |||||||||||| ||||||||||||| ||||||||||| || | |||||| |||||||||
Sbjct: 47136 tcctttcttgcactttcataactcgtgaaatgccgagttggtatgaattcccccaatttg 47195

                          
Query: 610   cgacctaccatag 622
             |||||||||||||
Sbjct: 47196 cgacctaccatag 47208

---

>gb|AY727187.1| Trillium ovatum psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 1029

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 198/248 (79%)
 Strand = Plus / Plus

                                                                       
Query: 68  aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 127
           |||| ||||||||||||| |||||| || || |||| ||||| || || | ||||||| |
Sbjct: 219 aactccgtcctcgagctctaggtcttaactttttcacaatagcacccccattgacttcag 278

                                                                       
Query: 128 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 187
           ||| | |||| ||||||||| |||  |  ||  ||   | |||||| || ||||  ||||
Sbjct: 279 cttgactaataaataaattcacttccttcaagcccaggttatgagtagcgtttgatgctg 338

                                                                       
Query: 188 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 247
           | ||||||||||| || || |||||||||||||| ||||| |||||||| | ||||||||
Sbjct: 339 cagaataaaccaatttcaaaatgggataagatgcccgataaggcatgagttccagtatca 398

                                                                       
Query: 248 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 307
           |||  || ||| | ||| ||||||  |||||||  ||||  |||||| ||||||||||||
Sbjct: 399 taagtgtgtccgcataggaacgcccgcgaatctgatcaattactcttcgtgctttgaaaa 458

                   
Query: 308 cagacata 315
           ||||||||
Sbjct: 459 cagacata 466



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 583 cgagtaggcacgaattctcccaatttgcgacctaccata 621
           ||||||||| ||||||||||||||||  |||||||||||
Sbjct: 664 cgagtaggcgcgaattctcccaatttatgacctaccata 702

---

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 95/111 (85%)
 Strand = Plus / Minus

                                                                           
Query: 288     aactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaactctctc 347
               |||||||||| ||||||||||||||||| ||||  |||||||||| ||||||||    | 
Sbjct: 4343410 aactctttgtactttgaaaacagacatatggatgtgtttttgtgcattgaaaacctgttt 4343351

                                                                  
Query: 348     gaacttaagtagacgatcggttggaactttccttgcgagtttccttagccc 398
               |||||||| |||| |||||||||| ||| | ||||| ||||||||||||||
Sbjct: 4343350 gaacttaattagatgatcggttggtactgttcttgcaagtttccttagccc 4343300

---

>gb|AC079633.9|AC079633 Genomic Sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0032G08, from Chromosome 3, complete sequence
          Length = 122052

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 95/111 (85%)
 Strand = Plus / Plus

                                                                         
Query: 288   aactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaactctctc 347
             |||||||||| ||||||||||||||||| ||||  |||||||||| ||||||||    | 
Sbjct: 83087 aactctttgtactttgaaaacagacatatggatgtgtttttgtgcattgaaaacctgttt 83146

                                                                
Query: 348   gaacttaagtagacgatcggttggaactttccttgcgagtttccttagccc 398
             |||||||| |||| |||||||||| ||| | ||||| ||||||||||||||
Sbjct: 83147 gaacttaattagatgatcggttggtactgttcttgcaagtttccttagccc 83197

---

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 95/111 (85%)
 Strand = Plus / Minus

                                                                           
Query: 288     aactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaactctctc 347
               |||||||||| ||||||||||||||||| ||||  |||||||||| ||||||||    | 
Sbjct: 4343525 aactctttgtactttgaaaacagacatatggatgtgtttttgtgcattgaaaacctgttt 4343466

                                                                  
Query: 348     gaacttaagtagacgatcggttggaactttccttgcgagtttccttagccc 398
               |||||||| |||| |||||||||| ||| | ||||| ||||||||||||||
Sbjct: 4343465 gaacttaattagatgatcggttggtactgttcttgcaagtttccttagccc 4343415

---

>dbj|AP005880.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0032G22
          Length = 127365

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 62/67 (92%)
 Strand = Plus / Minus

                                                                         
Query: 136   atgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataa 195
             ||||||||||| |||||||||||||||||||||||||| | |||||| | ||||||||||
Sbjct: 18621 atgaataaatttgctttgtcgaaatccctataatgagtagtatttgctgttgccgaataa 18562

                    
Query: 196   accaact 202
             |||||||
Sbjct: 18561 accaact 18555



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 96/114 (84%), Gaps = 9/114 (7%)
 Strand = Plus / Minus

                                                                         
Query: 229   ggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatctcgtcaaga 288
             ||||||||||||||||||||||  ||||| ||||||||||||      ||||| | ||||
Sbjct: 18540 ggcatgaggttcagtatcataatggtttcttcgtagtaacgc------atctcatgaaga 18487

                                                                   
Query: 289   actc-tttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaac 341
             |||| ||||| |||||||||| |||||  ||||  |||||||||||||||||||
Sbjct: 18486 actcttttgtactttgaaaacggacat--ggatgtgtttttgtgctttgaaaac 18435

---

>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome
          Length = 160286

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 157/194 (80%)
 Strand = Plus / Plus

                                                                         
Query: 76    cctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggctttagta 135
             ||||||||||||||| | ||||| |||||| |||||| |    ||||||| |||||| ||
Sbjct: 88364 cctcgagctcgaggttttaattttttcatagtagtaccctcgttgacttcagctttacta 88423

                                                                         
Query: 136   atgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataa 195
             || | |||| | ||||  | |||| || ||| |||| | |||||||| ||||| ||||||
Sbjct: 88424 ataactaaacttgcttcattgaaacccatattatgactagcatttgctgctgcagaataa 88483

                                                                         
Query: 196   accaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataacagtt 255
             |||||||| || ||||||||| | |||||||| ||||| || |  ||||||||||  |||
Sbjct: 88484 accaacttaaaaatgggataacacgctcgataaggcataagttcgagtatcataagtgtt 88543

                           
Query: 256   tcctcgtagtaacg 269
             ||||||||| ||||
Sbjct: 88544 tcctcgtaggaacg 88557

---

>gb|AY727186.1| Trillium texanum psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 1060

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 197/248 (79%)
 Strand = Plus / Plus

                                                                       
Query: 68  aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 127
           |||| ||||||||||||| |||||| || || |||| ||||| || || | ||||||| |
Sbjct: 228 aactccgtcctcgagctctaggtcttaactttttcacaatagcacccccattgacttcag 287

                                                                       
Query: 128 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 187
           ||| | |||| ||||||||| |||  |  ||  ||   | |||||| || ||||  ||||
Sbjct: 288 cttgactaataaataaattcacttccttcaagcccaggttatgagtagcgtttgatgctg 347

                                                                       
Query: 188 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 247
           | ||||||||||| || || |||||||||||||| ||||| ||||||||   ||||||||
Sbjct: 348 cagaataaaccaatttcaaaatgggataagatgcccgataaggcatgagtgccagtatca 407

                                                                       
Query: 248 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 307
           |||  || ||| | ||| ||||||  |||||||  ||||  |||||| ||||||||||||
Sbjct: 408 taagtgtgtccacataggaacgcccgcgaatctgatcaattactcttcgtgctttgaaaa 467

                   
Query: 308 cagacata 315
           ||||||||
Sbjct: 468 cagacata 475



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 583 cgagtaggcacgaattctcccaatttgcgacctaccatag 622
           ||||||||| ||||||||||||||||   |||||||||||
Sbjct: 673 cgagtaggcgcgaattctcccaatttataacctaccatag 712

---

>gb|DQ006202.1| Trillium sessile voucher Wells 4879 US PsbA (psbA) gene, partial
           cds; psbA-trnH intergenic spacer, complete sequence; and
           tRNA-His (trnH) gene, partial sequence; chloroplast
          Length = 1172

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 197/248 (79%)
 Strand = Plus / Plus

                                                                       
Query: 68  aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 127
           |||| ||||||||||||| |||||| || || |||| ||||| || || | ||||||| |
Sbjct: 283 aactccgtcctcgagctctaggtcttaactttttcacaatagcacccccattgacttcag 342

                                                                       
Query: 128 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 187
           ||| | |||| ||||||||| |||| |  ||  ||   | |||||| || ||||  ||||
Sbjct: 343 cttgactaataaataaattcactttcttcaagcccaggttatgagtagcgtttgatgctg 402

                                                                       
Query: 188 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 247
           | ||| ||||||| || || |||||||||||||| ||||| ||||||||   ||||||||
Sbjct: 403 cagaagaaaccaatttcaaaatgggataagatgcccgataaggcatgagtgccagtatca 462

                                                                       
Query: 248 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 307
           |||  || ||| | ||| ||||||  |||||||  ||||  |||||| ||||||||||||
Sbjct: 463 taagtgtgtccgcataggaacgcccgcgaatctgatcaatgactcttcgtgctttgaaaa 522

                   
Query: 308 cagacata 315
           ||||||||
Sbjct: 523 cagacata 530



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 584 gagtaggcacgaattctcccaatttgcgacctaccatag 622
           |||||||| ||||||||||||||||  ||||||||||||
Sbjct: 771 gagtaggcgcgaattctcccaatttatgacctaccatag 809

---

>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome
          Length = 160301

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 82/95 (86%)
 Strand = Plus / Plus

                                                                         
Query: 175   gcatttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatg 234
             |||||||| ||||| ||||||||||| ||||| ||||||||| |||||||||| ||||||
Sbjct: 88237 gcatttgctgctgcagaataaaccaattttaaaatgggataacatgctcgataaggcatg 88296

                                                
Query: 235   aggttcagtatcataacagtttcctcgtagtaacg 269
             || |  ||||||||||  ||||| |||||| ||||
Sbjct: 88297 agttctagtatcataagtgtttcttcgtaggaacg 88331

---

>emb|AJ315790.1|OSA315790 Oryza sativa partial BP-73 gene for SAP-like protein
          Length = 5896

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 94/111 (84%)
 Strand = Plus / Plus

                                                                        
Query: 288  aactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaactctctc 347
            |||||||||| ||||||||||||||||| ||||  |||||||||| ||||||||    | 
Sbjct: 3410 aactctttgtactttgaaaacagacatatggatgtgtttttgtgcgttgaaaacctgttt 3469

                                                               
Query: 348  gaacttaagtagacgatcggttggaactttccttgcgagtttccttagccc 398
            |||||||| |||| |||||| ||| ||| | ||||| ||||||||||||||
Sbjct: 3470 gaacttaattagatgatcggctggtactgttcttgcaagtttccttagccc 3520

---

>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome
          Length = 153337

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 197/249 (79%)
 Strand = Plus / Plus

                                                                         
Query: 68    aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 127
             |||||||||||  ||| |||||| | || || ||||  ||||||| || | |||||||||
Sbjct: 84744 aactacgtcctttagcccgaggtttaaactttttcacgatagtacccccattgacttcgg 84803

                                                                         
Query: 128   ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 187
             ||||| |||||||| |||  |||| ||  |||  | |||  ||| | |||||||| ||||
Sbjct: 84804 ctttactaatgaatgaatcagcttcgttaaaactcttattgtgactagcatttgctgctg 84863

                                                                         
Query: 188   ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 247
             | ||||||||||  || || |||||||||||||||||||| |||||||| | ||||| ||
Sbjct: 84864 cagaataaaccagtttaaaaatgggataagatgctcgataaggcatgagttccagtagca 84923

                                                                         
Query: 248   taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 307
             |||  |||||| | ||| |||| |  |||||||  ||||  |||||| ||||||||  | 
Sbjct: 84924 taagtgtttccgcataggaacgtccacgaatctgatcaacgactcttcgtgctttgtgag 84983

                      
Query: 308   cagacatag 316
             |||||||||
Sbjct: 84984 cagacatag 84992



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 584   gagtaggcacgaattctcccaatttgcgacctaccat 620
             |||||||  ||||||||||||||||| |||| |||||
Sbjct: 85164 gagtaggtgcgaattctcccaatttgtgacccaccat 85200

---

>emb|AJ970307.1| Cucumis sativus chloroplast complete genome
          Length = 155293

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 81/95 (85%)
 Strand = Plus / Plus

                                                                         
Query: 175   gcatttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatg 234
             |||||||| ||||||||||||||||| ||||| || |||||| |||||||||| ||||||
Sbjct: 86083 gcatttgctgctgccgaataaaccaattttaaaattggataacatgctcgataaggcatg 86142

                                                
Query: 235   aggttcagtatcataacagtttcctcgtagtaacg 269
             || |  |||||||| |  ||||| |||||| ||||
Sbjct: 86143 agttcgagtatcatcattgtttcttcgtaggaacg 86177

---

>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome
          Length = 155527

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 81/95 (85%)
 Strand = Plus / Plus

                                                                         
Query: 175   gcatttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatg 234
             |||||||| ||||||||||||||||| ||||| || |||||| |||||||||| ||||||
Sbjct: 86312 gcatttgctgctgccgaataaaccaattttaaaattggataacatgctcgataaggcatg 86371

                                                
Query: 235   aggttcagtatcataacagtttcctcgtagtaacg 269
             || |  |||||||| |  ||||| |||||| ||||
Sbjct: 86372 agttcgagtatcatcattgtttcttcgtaggaacg 86406

---

>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome
          Length = 159930

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 108/132 (81%)
 Strand = Plus / Plus

                                                                         
Query: 119   tgacttcggctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcat 178
             |||||||||||||| |||| |||||||  ||||  |  ||| ||||||  ||| | ||||
Sbjct: 89310 tgacttcggctttactaataaataaatcagcttctttcaaacccctattgtgactagcat 89369

                                                                         
Query: 179   ttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggt 238
             |||| ||||| |||||||| || || || ||||| ||| |||||||||| |||||||| |
Sbjct: 89370 ttgctgctgcggaataaactaatttgaaaatggggtaacatgctcgataaggcatgagtt 89429

                         
Query: 239   tcagtatcataa 250
              |||||||||||
Sbjct: 89430 ccagtatcataa 89441



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                   
Query: 584   gagtaggcacgaattctcccaatttgcgacctaccata 621
             |||||||| ||||||||||||||||| |||| ||||||
Sbjct: 89702 gagtaggcgcgaattctcccaatttgtgacccaccata 89739

---

>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome
          Length = 148964

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 195/248 (78%)
 Strand = Plus / Plus

                                                                         
Query: 68    aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 127
             |||||||||||||||| || ||| | || || ||||||||||| |  ||| ||||||| |
Sbjct: 85691 aactacgtcctcgagcccggggttttaactttttcataatagtgcctctattgacttcag 85750

                                                                         
Query: 128   ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 187
             ||||| |||| ||||| |   |||  |  ||| || ||| |||| | |||||||| ||||
Sbjct: 85751 ctttactaataaataagtcaacttcattcaaacccatattatgactagcatttgctgctg 85810

                                                                         
Query: 188   ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 247
             | |||||||| || |||||||| ||||||||||| | ||| ||||| || |  |||||||
Sbjct: 85811 cagaataaactaattttaagattggataagatgccctataaggcattagttctagtatca 85870

                                                                         
Query: 248   taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 307
             | |  | |||||| ||  |||| |  |||||||  ||||  |||||| ||||||||||||
Sbjct: 85871 tgagtgcttcctcataagaacgtccacgaatctgatcaattactcttcgtgctttgaaaa 85930

                     
Query: 308   cagacata 315
             ||||||||
Sbjct: 85931 cagacata 85938



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                    
Query: 584    gagtaggcacgaattctcccaatttgcgacctaccata 621
              |||||||  ||||||||||||||||| |||| ||||||
Sbjct: 148635 gagtaggtgcgaattctcccaatttgtgaccgaccata 148598



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 584   gagtaggcacgaattctcccaatttgcgacctaccata 621
             |||||||  ||||||||||||||||| |||| ||||||
Sbjct: 86287 gagtaggtgcgaattctcccaatttgtgaccgaccata 86324

---

>gb|AY962222.1| Hevea brasiliensis clone hmct52 microsatellite sequence
          Length = 813

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 97/118 (82%)
 Strand = Plus / Minus

                                                                       
Query: 119 tgacttcggctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcat 178
           |||||||||||||| |||||| ||||||  ||| || |||| || |||  ||| | ||||
Sbjct: 124 tgacttcggctttactaatgattaaattgacttcgttgaaacccatattgtgactagcat 65

                                                                     
Query: 179 ttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatgag 236
           |||| ||||| ||||||| ||| || || | ||||||| |||||||||| ||||||||
Sbjct: 64  ttgctgctgcagaataaatcaatttaaaaaggggataacatgctcgataaggcatgag 7

---

>emb|X13336.1|CHSORP Spinacia oleracea plastid genes rps3, rps19, rpl14, rpl16 and rpl22
           for ribosomal proteins S3, S19, L14, L16 and L22
          Length = 4102

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                       
Query: 175 gcatttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatg 234
           |||||||| ||||| ||||||| ||| || || ||||||||| |||||||||||||||||
Sbjct: 690 gcatttgctgctgcagaataaatcaatttaaaaatgggataacatgctcgatagggcatg 631

             
Query: 235 ag 236
           ||
Sbjct: 630 ag 629

---

>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome
          Length = 150725

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 55/62 (88%)
 Strand = Plus / Plus

                                                                         
Query: 175   gcatttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatg 234
             |||||||| ||||| ||||||| ||| || || ||||||||| |||||||||||||||||
Sbjct: 82252 gcatttgctgctgcagaataaatcaatttaaaaatgggataacatgctcgatagggcatg 82311

               
Query: 235   ag 236
             ||
Sbjct: 82312 ag 82313

---

>emb|AJ879453.1| Acorus calamus chloroplast, complete genome
          Length = 153821

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 88/106 (83%)
 Strand = Plus / Plus

                                                                         
Query: 175   gcatttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatg 234
             |||||||| ||||| || |||||||| ||||| || ||| ||||||||||||| ||||| 
Sbjct: 83378 gcatttgctgctgcagagtaaaccaattttaaaataggaaaagatgctcgataaggcatc 83437

                                                           
Query: 235   aggttcagtatcataacagtttcctcgtagtaacgccaccgaatct 280
             || |  ||||||||||  |||||||| ||| ||||||  |||||||
Sbjct: 83438 agttctagtatcataattgtttcctcataggaacgcccacgaatct 83483



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 584   gagtaggcacgaattctcccaatttgcgacctaccata 621
             |||||||  ||||||||||||||||| |||| ||||||
Sbjct: 83677 gagtaggtgcgaattctcccaatttgtgaccgaccata 83714

---

>gb|DQ069474.1| Yucca schidigera ribosomal protein S19 (rps19) gene, partial cds;
           chloroplast
          Length = 276

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                 
Query: 584 gagtaggcacgaattctcccaatttgcgacctaccata 621
           |||||||| ||||||||||||||||| |||||||||||
Sbjct: 232 gagtaggcgcgaattctcccaatttgtgacctaccata 195

---

>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome
          Length = 151104

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 71/85 (83%)
 Strand = Plus / Plus

                                                                         
Query: 67    aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 126
             |||||||| ||||||||||||||| | ||| ||||||| |||||||   || | ||||||
Sbjct: 82982 aaactacgccctcgagctcgaggttttaatctcttcatgatagtacctttatttacttcg 83041

                                      
Query: 127   gctttagtaatgaataaattcgctt 151
             |||||| |||| | |||||| ||||
Sbjct: 83042 gctttactaatcactaaatttgctt 83066



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 585   agtaggcacgaattctcccaatttgcgacctaccata 621
             ||||||| | ||||||||||||||| | |||||||||
Sbjct: 83401 agtaggcgcaaattctcccaatttgtgtcctaccata 83437

---

>gb|DQ069473.1| Typha latifolia ribosomal protein S19 (rps19) gene, partial cds;
           chloroplast
          Length = 276

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 584 gagtaggcacgaattctcccaatttgcgacctaccata 621
           |||||||  ||||||||||||||||| |||||||||||
Sbjct: 232 gagtaggggcgaattctcccaatttgtgacctaccata 195



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 534 acgacgagatttagtatcctttcttgcat 562
           ||||||||||||| |||| ||||||||||
Sbjct: 276 acgacgagatttattatcgtttcttgcat 248

---

>gb|AC120884.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0017D19, complete sequence
          Length = 142015

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                           
Query: 558   tgcattttcataactcgtaaaatgccgagt 587
             |||| |||||||||||||||||||||||||
Sbjct: 58206 tgcactttcataactcgtaaaatgccgagt 58177

---

>emb|X07521.1|HVD1PSBA Hordeum vulgare chloroplast psbA gene for D1 protein of photosystem
            II
          Length = 1428

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                      
Query: 503  cttcttaatctttctattcagaattc 528
            ||||||||||||||||||||||||||
Sbjct: 1403 cttcttaatctttctattcagaattc 1428

---

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                              
Query: 558      tgcattttcataactcgtaaaatgccgagt 587
                |||| |||||||||||||||||||||||||
Sbjct: 22627420 tgcactttcataactcgtaaaatgccgagt 22627391

---

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                              
Query: 558      tgcattttcataactcgtaaaatgccgagt 587
                |||| |||||||||||||||||||||||||
Sbjct: 22937331 tgcactttcataactcgtaaaatgccgagt 22937302

---

>gb|M38374.1|BLYCPPSBAB Barley chloroplast herbicide-binding protein (psbA) gene, complete
            cds
          Length = 1430

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                      
Query: 503  cttcttaatctttctattcagaattc 528
            ||||||||||||||||||||||||||
Sbjct: 1405 cttcttaatctttctattcagaattc 1430

---

>emb|X07942.1|CHHVPSBA Barley chloroplast psbA gene
          Length = 2190

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                      
Query: 503  cttcttaatctttctattcagaattc 528
            ||||||||||||||||||||||||||
Sbjct: 2165 cttcttaatctttctattcagaattc 2190

---

>gb|AC097174.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1111_A10,
             complete sequence
          Length = 155106

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                              
Query: 149   ctttgtcgaaatccctataatgagttgcatttg 181
             |||||| |||||||||||||||||| |||||||
Sbjct: 91188 ctttgttgaaatccctataatgagtagcatttg 91220

---

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                                
Query: 149     ctttgtcgaaatccctataatgagttgcatttg 181
               |||||| |||||||||||||||||| |||||||
Sbjct: 5176685 ctttgttgaaatccctataatgagtagcatttg 5176717



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                     
Query: 406     ttcttctttatcctagggatatactttactagtttgaaacttgtcataaataag 459
               ||||| ||||||| |||| | |||  |||| ||||||||||||||| |||||||
Sbjct: 4877979 ttcttatttatccaaggggtttacggtactggtttgaaacttgtcacaaataag 4877926

---

>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome
          Length = 160928

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                 
Query: 68    aactacgtcctcgagctcgaggtctgaatttcttca 103
             ||||||||||||||||||||||| | ||||| ||||
Sbjct: 88506 aactacgtcctcgagctcgaggtttcaattttttca 88541

---

>gb|DQ069472.1| Ranunculus macranthus ribosomal protein S19 (rps19) gene, partial
           cds; chloroplast
          Length = 276

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 595 aattctcccaatttgcgacctaccata 621
           ||||||||||||||| |||||||||||
Sbjct: 221 aattctcccaatttgtgacctaccata 195

---

>gb|DQ069471.1| Nuphar advena ribosomal protein S19 (rps19) gene, partial cds;
           chloroplast
          Length = 276

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 595 aattctcccaatttgcgacctaccata 621
           |||||||||||||||||||| ||||||
Sbjct: 221 aattctcccaatttgcgacccaccata 195

---

>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence
          Length = 162686

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 595   aattctcccaatttgcgacctaccata 621
             ||||||||||||||| |||||||||||
Sbjct: 90702 aattctcccaatttgtgacctaccata 90728

---

>gb|AY757822.1| Acorus gramineus Rps19 (rps19) gene, partial cds; chloroplast
          Length = 228

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 584 gagtaggcacgaattctcccaatttgcgacctaccata 621
           |||||||  ||||||||||||||||| |||| ||||||
Sbjct: 181 gagtaggtgcgaattctcccaatttgtgaccgaccata 144

---

>gb|DQ191749.1| Dioscorea zingiberensis clone 2 from Baoshan Yunnan Province
           psbA-trnH intergenic spacer, complete sequence;
           chloroplast
          Length = 503

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 595 aattctcccaatttgcgacctaccat 620
           ||||||||||||||| ||||||||||
Sbjct: 143 aattctcccaatttgtgacctaccat 168

---

>gb|DQ191747.1| Dioscorea zingiberensis clone 2 from Hunan Province psbA-trnH
           intergenic spacer, complete sequence; chloroplast
          Length = 503

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 595 aattctcccaatttgcgacctaccat 620
           ||||||||||||||| ||||||||||
Sbjct: 143 aattctcccaatttgtgacctaccat 168

---

>gb|AF389766.1| Uncultured bacterium clone NIW3-1 dinitrogenase reductase (nifH)
           gene, partial cds
          Length = 414

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 71  tacgtcctcgagctcgaggtct 92
           ||||||||||||||||||||||
Sbjct: 192 tacgtcctcgagctcgaggtct 171

---

>gb|DQ069469.1| Acorus americanus ribosomal protein S19 (rps19) gene, partial cds;
           chloroplast
          Length = 276

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 584 gagtaggcacgaattctcccaatttgcgacctaccata 621
           |||||||  ||||||||||||||||| |||| ||||||
Sbjct: 232 gagtaggtgcgaattctcccaatttgtgaccgaccata 195

---

>gb|AY424708.1| Uncultured bacterium isolate DGGE band BDS17 NifH (nifH) gene,
          partial cds
          Length = 221

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 71 tacgtcctcgagctcgaggtct 92
          ||||||||||||||||||||||
Sbjct: 94 tacgtcctcgagctcgaggtct 73

---

>gb|AY424700.1| Uncultured bacterium isolate DGGE band BRS9 NifH (nifH) gene,
          partial cds
          Length = 231

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 71 tacgtcctcgagctcgaggtct 92
          ||||||||||||||||||||||
Sbjct: 94 tacgtcctcgagctcgaggtct 73

---

>gb|AY424699.1| Uncultured bacterium isolate DGGE band BDS8 NifH (nifH) gene,
          partial cds
          Length = 216

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 71 tacgtcctcgagctcgaggtct 92
          ||||||||||||||||||||||
Sbjct: 94 tacgtcctcgagctcgaggtct 73

---

>gb|DQ131105.1| Dioscorea zingiberensis psbA-trnH intergenic spacer, partial
           sequence; chloroplast
          Length = 503

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 595 aattctcccaatttgcgacctaccat 620
           ||||||||||||||| ||||||||||
Sbjct: 143 aattctcccaatttgtgacctaccat 168

---

>emb|AL607000.3|OSJN00132 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0089B03,
             complete sequence
          Length = 130910

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 152   tgtcgaaatccctataatgagttgcatttg 181
             ||||||||||| |||||||||| |||||||
Sbjct: 89462 tgtcgaaatccatataatgagtagcatttg 89433

---

>dbj|AP004703.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0528B09
          Length = 156897

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 593    cgaattctcccaatttgcgacctaccatag 622
              ||||||| ||||||||||||||| ||||||
Sbjct: 103808 cgaattcccccaatttgcgacctgccatag 103779

---

>gb|DQ006176.1| Carex cephalophora voucher Lea 1483 US PsbA (psbA) gene, partial
           cds; psbA-trnH intergenic spacer, complete sequence; and
           tRNA-His (trnH) gene, partial sequence; chloroplast
          Length = 868

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 586 gtaggcacgaattctcccaatttgcgacct 615
           |||||| ||||||||||||||||| |||||
Sbjct: 431 gtaggcgcgaattctcccaatttgtgacct 460

---

>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11,
              complete sequence
          Length = 187956

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                    
Query: 406    ttcttctttatcctagggatatactttactagtttgaaacttgtcataaataag 459
              ||||| ||||||| |||| | |||  |||| ||||||||||||||| |||||||
Sbjct: 150387 ttcttatttatccaaggggtttacggtactggtttgaaacttgtcacaaataag 150334

---

>gb|AY386787.1| Bradyrhizobium liaoningense strain Spr3-7 nitrogenase Fe protein
           (nifH) gene, partial cds
          Length = 356

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 71  tacgtcctcgagctcgaggtc 91
           |||||||||||||||||||||
Sbjct: 198 tacgtcctcgagctcgaggtc 178

---

>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome
          Length = 70028

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 585   agtaggcacgaattctcccaatttgcgacctaccata 621
             |||||| || |||||||| |||||| |||||||||||
Sbjct: 19622 agtaggtacaaattctcctaatttgtgacctaccata 19658

---

>gb|AE007235.1| Sinorhizobium meliloti 1021 plasmid pSymA section 41 of 121 of the
            complete plasmid sequence
          Length = 10370

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 72   acgtcctcgagctcgaggtct 92
            |||||||||||||||||||||
Sbjct: 8029 acgtcctcgagctcgaggtct 8009

---

>gb|DQ480974.1| Uncultured bacterium clone RT-CLY_20 dinitrogenase reductase
          (nifH) gene, partial cds
          Length = 329

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 72 acgtcctcgagctcgaggtct 92
          |||||||||||||||||||||
Sbjct: 95 acgtcctcgagctcgaggtct 75

---

>gb|DQ480958.1| Uncultured bacterium clone RT-075_39 dinitrogenase reductase
          (nifH) gene, partial cds
          Length = 329

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 72 acgtcctcgagctcgaggtct 92
          |||||||||||||||||||||
Sbjct: 95 acgtcctcgagctcgaggtct 75

---

>gb|DQ480915.1| Uncultured bacterium clone UT-CLY_37 dinitrogenase reductase
          (nifH) gene, partial cds
          Length = 329

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 72 acgtcctcgagctcgaggtct 92
          |||||||||||||||||||||
Sbjct: 95 acgtcctcgagctcgaggtct 75

---

>gb|DQ480883.1| Uncultured bacterium clone UT-600_30 dinitrogenase reductase
          (nifH) gene, partial cds
          Length = 329

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 72 acgtcctcgagctcgaggtct 92
          |||||||||||||||||||||
Sbjct: 95 acgtcctcgagctcgaggtct 75

---

>gb|AF389770.1| Uncultured bacterium clone NIS16-4 dinitrogenase reductase (nifH)
           gene, partial cds
          Length = 414

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 72  acgtcctcgagctcgaggtct 92
           |||||||||||||||||||||
Sbjct: 191 acgtcctcgagctcgaggtct 171

---

>gb|AF389775.1| Uncultured bacterium clone NIS15-3 dinitrogenase reductase (nifH)
           gene, partial cds
          Length = 414

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 72  acgtcctcgagctcgaggtct 92
           |||||||||||||||||||||
Sbjct: 191 acgtcctcgagctcgaggtct 171

---

>gb|AF389778.1| Uncultured bacterium clone NIS14-4 dinitrogenase reductase (nifH)
           gene, partial cds
          Length = 414

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 72  acgtcctcgagctcgaggtct 92
           |||||||||||||||||||||
Sbjct: 191 acgtcctcgagctcgaggtct 171

---

>gb|AF389779.1| Uncultured bacterium clone NIS14-3 dinitrogenase reductase (nifH)
           gene, partial cds
          Length = 414

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 72  acgtcctcgagctcgaggtct 92
           |||||||||||||||||||||
Sbjct: 191 acgtcctcgagctcgaggtct 171

---

>gb|AF389783.1| Uncultured bacterium clone NIS13-3 dinitrogenase reductase (nifH)
           gene, partial cds
          Length = 414

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 72  acgtcctcgagctcgaggtct 92
           |||||||||||||||||||||
Sbjct: 191 acgtcctcgagctcgaggtct 171

---

>gb|AF389790.1| Uncultured bacterium clone NIS11-3 dinitrogenase reductase (nifH)
           gene, partial cds
          Length = 414

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 72  acgtcctcgagctcgaggtct 92
           |||||||||||||||||||||
Sbjct: 191 acgtcctcgagctcgaggtct 171

---

>gb|AY424732.1| Uncultured bacterium isolate DGGE band BDS41 NifH (nifH) gene,
          partial cds
          Length = 234

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 72 acgtcctcgagctcgaggtct 92
          |||||||||||||||||||||
Sbjct: 93 acgtcctcgagctcgaggtct 73

---

>gb|AY424697.1| Uncultured bacterium isolate DGGE band BDS6 NifH (nifH) gene,
          partial cds
          Length = 249

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 71 tacgtcctcgagctcgaggtc 91
          |||||||||||||||||||||
Sbjct: 94 tacgtcctcgagctcgaggtc 74


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,194,470
Number of Sequences: 3902068
Number of extensions: 6194470
Number of successful extensions: 129840
Number of sequences better than 10.0: 368
Number of HSP's better than 10.0 without gapping: 379
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 128056
Number of HSP's gapped (non-prelim): 1707
length of query: 622
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 599
effective length of database: 17,143,297,704
effective search space: 10268835324696
effective search space used: 10268835324696
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---