Clone Name | rbasd26k10 |
---|---|
Clone Library Name | barley_pub |
>TBX18_HUMAN (O95935) T-box transcription factor TBX18 (T-box protein 18)| Length = 607 Score = 30.4 bits (67), Expect = 4.9 Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 5/92 (5%) Frame = -3 Query: 484 GFTRKHSILLDRDSSSQ---HIATWTSKALSTALVSS*GCKRKAQQVLPWTTSLLQGQGR 314 G H LL S S H+ TS+ S A C R + ++TSL + R Sbjct: 381 GVPATHPHLLSGSSCSSPAFHLGPNTSQLCSLAPADYSACARSGLTLNRYSTSLAETYNR 440 Query: 313 RVSLSASTRA--ATPSLVGRRLATAISLQFPG 224 + + T A TPS VG +T++++ G Sbjct: 441 LTNQAGETFAPPRTPSYVGVSSSTSVNMSMGG 472
>A85B_MYCKA (P21160) Antigen 85-B precursor (85B) (Extracellular alpha-antigen)| (Antigen 85 complex B) (Ag85B) (Mycolyl transferase 85B) (EC 2.3.1.-) (Fibronectin-binding protein B) Length = 325 Score = 30.4 bits (67), Expect = 4.9 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 2/55 (3%) Frame = -3 Query: 331 LQGQGRRVSLSASTRAATPSLVGRR--LATAISLQFPGLRLWLMIASSSSMGYCI 173 ++ GRR+ + A+ AA P LVG ATA + PGL + + S++MG I Sbjct: 8 IRAWGRRLLVGAAAAAALPGLVGLAGGAATAGAFSRPGLPVEYLQVPSAAMGRSI 62
>LEU3_STRT2 (Q5M405) 3-isopropylmalate dehydrogenase (EC 1.1.1.85) (Beta-IPM| dehydrogenase) (IMDH) (3-IPM-DH) Length = 345 Score = 30.0 bits (66), Expect = 6.5 Identities = 14/50 (28%), Positives = 28/50 (56%) Frame = -3 Query: 334 LLQGQGRRVSLSASTRAATPSLVGRRLATAISLQFPGLRLWLMIASSSSM 185 + QG+G++V+ S + R++A +SL+FP + L + S++M Sbjct: 171 IAQGRGKKVTSIDKQNVLATSKLWRKVADEVSLEFPDVTLEHQLVDSAAM 220
>LEU3_STRT1 (Q5LZF3) 3-isopropylmalate dehydrogenase (EC 1.1.1.85) (Beta-IPM| dehydrogenase) (IMDH) (3-IPM-DH) Length = 345 Score = 30.0 bits (66), Expect = 6.5 Identities = 14/50 (28%), Positives = 28/50 (56%) Frame = -3 Query: 334 LLQGQGRRVSLSASTRAATPSLVGRRLATAISLQFPGLRLWLMIASSSSM 185 + QG+G++V+ S + R++A +SL+FP + L + S++M Sbjct: 171 IAQGRGKKVTSIDKQNVLATSKLWRKVADEVSLEFPDVTLEHQLVDSAAM 220
>ESPL1_HUMAN (Q14674) Separin (EC 3.4.22.49) (Separase) (Caspase-like protein| ESPL1) (Extra spindle poles-like 1 protein) Length = 2120 Score = 29.6 bits (65), Expect = 8.4 Identities = 15/37 (40%), Positives = 21/37 (56%) Frame = -1 Query: 486 ADLLASIPSCWTGILPLSTLQHGPAKRFPLLWSLLRD 376 A L S+ CW G+L S+ + GPA+ L LL+D Sbjct: 1792 ASLEKSVLGCWKGLLLPSSEEPGPAQEASRLQELLQD 1828
>GLADA_MICEC (Q70KD4) Putative L-glutamine:3-amino-2,3-dideoxy-scyllo-inosose| aminotransferase (EC 2.6.1.-) (Putative L-glutamine:amino-DOI aminotransferase) (Putative gentamicin aminotransferase II) Length = 418 Score = 29.6 bits (65), Expect = 8.4 Identities = 13/37 (35%), Positives = 19/37 (51%) Frame = -3 Query: 508 VADYSHLGGFTRKHSILLDRDSSSQHIATWTSKALST 398 VAD L R+H++LL D + H A W + + T Sbjct: 150 VADMDALLDICRRHNLLLIEDCAHAHFAEWRGRCVGT 186 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 99,417,698 Number of Sequences: 219361 Number of extensions: 2133108 Number of successful extensions: 5447 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 5265 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5447 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6370891296 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)