Clone Name | rbasd26k10 |
---|---|
Clone Library Name | barley_pub |
>gb|AY587552.1| Hordeum vulgare subsp. vulgare GAMYB-binding protein mRNA, complete cds Length = 2275 Score = 779 bits (393), Expect = 0.0 Identities = 486/517 (94%) Strand = Plus / Minus Query: 147 ttgctttatggtcaattcagctctcagatgcagtaccccattgatgaagaagaggctatc 206 |||||||||||||| ||| ||||||||||| ||||| |||| |||||||||||||| || Sbjct: 2091 ttgctttatggtcagttccgctctcagatgtagtactccatcaatgaagaagaggctgtc 2032 Query: 207 atcagccataaacgaaggccagggaattgcaaagagattgcggtagccaaccgccttccc 266 ||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||| || Sbjct: 2031 atcagccataaacgacggccagggaattgcaaagagattccggtagccaactgcctttcc 1972 Query: 267 accagtgaaggtgtagcagcccttgtacttgctgacaaactcacccgacggccttgtcct 326 |||||||||||||||| ||||||| |||||||||||||| || ||||||||||||||||| Sbjct: 1971 accagtgaaggtgtagtagcccttatacttgctgacaaaatcgcccgacggccttgtcct 1912 Query: 327 tgcagcaaactcgtagtccacggtaacacttgttgagcctttctcttgcatccctaagaa 386 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1911 tgcagcaaactcatagtccacggtaacacttgttgagcctttctcttgcatccctaagaa 1852 Query: 387 gagaccaaagcagtggaaagcgctttgctggtccatgttgcaatgtgctgagaggaagaa 446 ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 1851 gagaccaaagcagtggaaagcactttgctgatccatgttgcaatgtgctgagaggaagaa 1792 Query: 447 tccctgtccagcaagatggaatgcttgcgagtaaatccgcccagatgggaatagtcggcc 506 |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 1791 tccctgtccagcaagatggaatgcttgcgagtaaatccgcccggatgggaaaagtcggct 1732 Query: 507 acactcctcacgcttcagatccaagtatgctatgcactgaggataaggtcggtcaaattc 566 ||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||| Sbjct: 1731 acactcctcacgcttcagatccaagtatgctatgcactgaggatatggttgatcaaattc 1672 Query: 567 caccaccttaagcggacgatatttgtaagcacgttcagtatactttctggaggtcaacac 626 |||||||||||||||||||||||||||||| ||||| ||||| || || |||||||||| Sbjct: 1671 caccaccttaagcggacgatatttgtaagctcgttcggtatatttcctacaggtcaacac 1612 Query: 627 atctgtagcaagggcgcgctgtcgatgtggtgcatca 663 ||||| ||||||||||||||||||||||||||||||| Sbjct: 1611 atctgcagcaagggcgcgctgtcgatgtggtgcatca 1575 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Minus Query: 34 aaaaacatgtttgaatgacacaagattttcca 65 ||||||||||||||| ||||||||||||||| Sbjct: 2133 aaaaacatgtttgaaccacacaagattttcca 2102
>gb|AY167562.1| Hordeum vulgare subsp. vulgare GAMYB-binding protein (gbp4) mRNA, partial cds Length = 730 Score = 666 bits (336), Expect = 0.0 Identities = 405/428 (94%) Strand = Plus / Minus Query: 236 caaagagattgcggtagccaaccgccttcccaccagtgaaggtgtagcagcccttgtact 295 |||||||||| ||||||||||| ||||| |||||||||||||||||| ||||||| |||| Sbjct: 730 caaagagattccggtagccaactgcctttccaccagtgaaggtgtagtagcccttatact 671 Query: 296 tgctgacaaactcacccgacggccttgtccttgcagcaaactcgtagtccacggtaacac 355 |||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 670 tgctgacaaaatcgcccgacggccttgtccttgcagcaaactcatagtccacggtaacac 611 Query: 356 ttgttgagcctttctcttgcatccctaagaagagaccaaagcagtggaaagcgctttgct 415 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 610 ttgttgagcctttctcttgcatccctaagaagagaccaaagcagtggaaagcactttgct 551 Query: 416 ggtccatgttgcaatgtgctgagaggaagaatccctgtccagcaagatggaatgcttgcg 475 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 550 gatccatgttgcaatgtgctgagaggaagaatccctgtccagcaagatggaatgcttgcg 491 Query: 476 agtaaatccgcccagatgggaatagtcggccacactcctcacgcttcagatccaagtatg 535 ||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 490 agtaaatccgcccggatgggaaaagtcggctacactcctcacgcttcagatccaagtatg 431 Query: 536 ctatgcactgaggataaggtcggtcaaattccaccaccttaagcggacgatatttgtaag 595 |||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 430 ctatgcactgaggatatggttgatcaaattccaccaccttaagcggacgatatttgtaag 371 Query: 596 cacgttcagtatactttctggaggtcaacacatctgtagcaagggcgcgctgtcgatgtg 655 | ||||| ||||| || || ||||||||||||||| ||||||||||||||||||||||| Sbjct: 370 ctcgttcggtatatttcctacaggtcaacacatctgcagcaagggcgcgctgtcgatgtg 311 Query: 656 gtgcatca 663 |||||||| Sbjct: 310 gtgcatca 303
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 494 bits (249), Expect = e-136 Identities = 456/525 (86%) Strand = Plus / Plus Query: 139 atctagagttgctttatggtcaattcagctctcagatgcagtaccccattgatgaagaag 198 |||||| |||| |||||||| ||||||||||||| || |||||||| | |||||||||| Sbjct: 17863128 atctagggttgttttatggttaattcagctctcaagtgtagtaccccctcgatgaagaag 17863187 Query: 199 aggctatcatcagccataaacgaaggccagggaattgcaaagagattgcggtagccaacc 258 ||||| ||||||||||| ||||| | ||| ||||||||||| ||||| ||||| |||||| Sbjct: 17863188 aggctgtcatcagccatgaacgatgaccatggaattgcaaatagattccggtatccaacc 17863247 Query: 259 gccttcccaccagtgaaggtgtagcagcccttgtacttgctgacaaactcacccgacggc 318 ||||| ||||| |||||||| ||| ||||||||||||||||||||||||| || || ||| Sbjct: 17863248 gcctttccaccggtgaaggtatagtagcccttgtacttgctgacaaactcgcctgatggc 17863307 Query: 319 cttgtccttgcagcaaactcgtagtccacggtaacacttgttgagcctttctcttgcatc 378 ||||| ||||| ||||||||||| || || |||||||| || |||||||||||||||||| Sbjct: 17863308 cttgttcttgcggcaaactcgtaatctacagtaacactagtcgagcctttctcttgcatc 17863367 Query: 379 cctaagaagagaccaaagcagtggaaagcgctttgctggtccatgttgcaatgtgctgag 438 |||| ||| ||||||||||| ||||| || |||||||| |||||||| || ||||||||| Sbjct: 17863368 cctaggaacagaccaaagcaatggaatgcactttgctgatccatgttacagtgtgctgag 17863427 Query: 439 aggaagaatccctgtccagcaagatggaatgcttgcgagtaaatccgcccagatgggaat 498 || ||||| ||||| || || |||||||| ||||| ||||| ||||| ||||||||||| Sbjct: 17863428 agaaagaagccctgccctgcgagatggaacgcttgtgagtatatccgtccagatgggaaa 17863487 Query: 499 agtcggccacactcctcacgcttcagatccaagtatgctatgcactgaggataaggtcgg 558 || || | |||||||||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 17863488 agccgactgcactcctcacgcttcagatccaagtatgctatacactgtggatatggtcga 17863547 Query: 559 tcaaattccaccaccttaagcggacgatatttgtaagcacgttcagtatactttctggag 618 |||||||||||||||||||| ||||||||||||||||| || |||| ||| || || | Sbjct: 17863548 tcaaattccaccaccttaagtggacgatatttgtaagctcgctcagcatatttcctacaa 17863607 Query: 619 gtcaacacatctgtagcaagggcgcgctgtcgatgtggtgcatca 663 ||||| ||||||| |||||||| ||||||||||||||||||||| Sbjct: 17863608 gtcaaaacatctgcagcaagggtacgctgtcgatgtggtgcatca 17863652
>dbj|AP003618.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0561B08 Length = 161083 Score = 494 bits (249), Expect = e-136 Identities = 456/525 (86%) Strand = Plus / Plus Query: 139 atctagagttgctttatggtcaattcagctctcagatgcagtaccccattgatgaagaag 198 |||||| |||| |||||||| ||||||||||||| || |||||||| | |||||||||| Sbjct: 68317 atctagggttgttttatggttaattcagctctcaagtgtagtaccccctcgatgaagaag 68376 Query: 199 aggctatcatcagccataaacgaaggccagggaattgcaaagagattgcggtagccaacc 258 ||||| ||||||||||| ||||| | ||| ||||||||||| ||||| ||||| |||||| Sbjct: 68377 aggctgtcatcagccatgaacgatgaccatggaattgcaaatagattccggtatccaacc 68436 Query: 259 gccttcccaccagtgaaggtgtagcagcccttgtacttgctgacaaactcacccgacggc 318 ||||| ||||| |||||||| ||| ||||||||||||||||||||||||| || || ||| Sbjct: 68437 gcctttccaccggtgaaggtatagtagcccttgtacttgctgacaaactcgcctgatggc 68496 Query: 319 cttgtccttgcagcaaactcgtagtccacggtaacacttgttgagcctttctcttgcatc 378 ||||| ||||| ||||||||||| || || |||||||| || |||||||||||||||||| Sbjct: 68497 cttgttcttgcggcaaactcgtaatctacagtaacactagtcgagcctttctcttgcatc 68556 Query: 379 cctaagaagagaccaaagcagtggaaagcgctttgctggtccatgttgcaatgtgctgag 438 |||| ||| ||||||||||| ||||| || |||||||| |||||||| || ||||||||| Sbjct: 68557 cctaggaacagaccaaagcaatggaatgcactttgctgatccatgttacagtgtgctgag 68616 Query: 439 aggaagaatccctgtccagcaagatggaatgcttgcgagtaaatccgcccagatgggaat 498 || ||||| ||||| || || |||||||| ||||| ||||| ||||| ||||||||||| Sbjct: 68617 agaaagaagccctgccctgcgagatggaacgcttgtgagtatatccgtccagatgggaaa 68676 Query: 499 agtcggccacactcctcacgcttcagatccaagtatgctatgcactgaggataaggtcgg 558 || || | |||||||||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 68677 agccgactgcactcctcacgcttcagatccaagtatgctatacactgtggatatggtcga 68736 Query: 559 tcaaattccaccaccttaagcggacgatatttgtaagcacgttcagtatactttctggag 618 |||||||||||||||||||| ||||||||||||||||| || |||| ||| || || | Sbjct: 68737 tcaaattccaccaccttaagtggacgatatttgtaagctcgctcagcatatttcctacaa 68796 Query: 619 gtcaacacatctgtagcaagggcgcgctgtcgatgtggtgcatca 663 ||||| ||||||| |||||||| ||||||||||||||||||||| Sbjct: 68797 gtcaaaacatctgcagcaagggtacgctgtcgatgtggtgcatca 68841
>dbj|AK066411.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013066L01, full insert sequence Length = 2122 Score = 494 bits (249), Expect = e-136 Identities = 456/525 (86%) Strand = Plus / Minus Query: 139 atctagagttgctttatggtcaattcagctctcagatgcagtaccccattgatgaagaag 198 |||||| |||| |||||||| ||||||||||||| || |||||||| | |||||||||| Sbjct: 1878 atctagggttgttttatggttaattcagctctcaagtgtagtaccccctcgatgaagaag 1819 Query: 199 aggctatcatcagccataaacgaaggccagggaattgcaaagagattgcggtagccaacc 258 ||||| ||||||||||| ||||| | ||| ||||||||||| ||||| ||||| |||||| Sbjct: 1818 aggctgtcatcagccatgaacgatgaccatggaattgcaaatagattccggtatccaacc 1759 Query: 259 gccttcccaccagtgaaggtgtagcagcccttgtacttgctgacaaactcacccgacggc 318 ||||| ||||| |||||||| ||| ||||||||||||||||||||||||| || || ||| Sbjct: 1758 gcctttccaccggtgaaggtatagtagcccttgtacttgctgacaaactcgcctgatggc 1699 Query: 319 cttgtccttgcagcaaactcgtagtccacggtaacacttgttgagcctttctcttgcatc 378 ||||| ||||| ||||||||||| || || |||||||| || |||||||||||||||||| Sbjct: 1698 cttgttcttgcggcaaactcgtaatctacagtaacactagtcgagcctttctcttgcatc 1639 Query: 379 cctaagaagagaccaaagcagtggaaagcgctttgctggtccatgttgcaatgtgctgag 438 |||| ||| ||||||||||| ||||| || |||||||| |||||||| || ||||||||| Sbjct: 1638 cctaggaacagaccaaagcaatggaatgcactttgctgatccatgttacagtgtgctgag 1579 Query: 439 aggaagaatccctgtccagcaagatggaatgcttgcgagtaaatccgcccagatgggaat 498 || ||||| ||||| || || |||||||| ||||| ||||| ||||| ||||||||||| Sbjct: 1578 agaaagaagccctgccctgcgagatggaacgcttgtgagtatatccgtccagatgggaaa 1519 Query: 499 agtcggccacactcctcacgcttcagatccaagtatgctatgcactgaggataaggtcgg 558 || || | |||||||||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 1518 agccgactgcactcctcacgcttcagatccaagtatgctatacactgtggatatggtcga 1459 Query: 559 tcaaattccaccaccttaagcggacgatatttgtaagcacgttcagtatactttctggag 618 |||||||||||||||||||| ||||||||||||||||| || |||| ||| || || | Sbjct: 1458 tcaaattccaccaccttaagtggacgatatttgtaagctcgctcagcatatttcctacaa 1399 Query: 619 gtcaacacatctgtagcaagggcgcgctgtcgatgtggtgcatca 663 ||||| ||||||| |||||||| ||||||||||||||||||||| Sbjct: 1398 gtcaaaacatctgcagcaagggtacgctgtcgatgtggtgcatca 1354
>ref|XM_464897.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1966 Score = 297 bits (150), Expect = 2e-77 Identities = 351/418 (83%) Strand = Plus / Minus Query: 146 gttgctttatggtcaattcagctctcagatgcagtaccccattgatgaagaagaggctat 205 |||||||||| |||||||||||||||||||||| || || | || |||||||||||| | Sbjct: 1764 gttgctttatcgtcaattcagctctcagatgcaacacgccgtcgaggaagaagaggctgt 1705 Query: 206 catcagccataaacgaaggccagggaattgcaaagagattgcggtagccaaccgccttcc 265 | |||||||| |||| | ||| || || ||||||||||| | ||| ||||||||||||| Sbjct: 1704 cgtcagccatgaacgtcgaccatggtatcgcaaagagattcctgtaaccaaccgccttcc 1645 Query: 266 caccagtgaaggtgtagcagcccttgtacttgctgacaaactcacccgacggccttgtcc 325 |||| ||||| |||||| |||||||||||||| |||||||| || ||||| ||||||| Sbjct: 1644 caccggtgaacgtgtagttacccttgtacttgctcacaaactctcctgacggtcttgtcc 1585 Query: 326 ttgcagcaaactcgtagtccacggtaacacttgttgagcctttctcttgcatccctaaga 385 ||||||||||||| || || || || || || ||||||| ||||||||||||||||||| Sbjct: 1584 ttgcagcaaactcataatctactgtcacgctcattgagcccttctcttgcatccctaaga 1525 Query: 386 agagaccaaagcagtggaaagcgctttgctggtccatgttgcaatgtgctgagaggaaga 445 ||||||| ||||||| ||| | || ||||| |||||||| || |||||||||||||||| Sbjct: 1524 agagaccgaagcagtagaacgtactctgctgttccatgttacagtgtgctgagaggaaga 1465 Query: 446 atccctgtccagcaagatggaatgcttgcgagtaaatccgcccagatgggaatagtcggc 505 | ||||| || ||||||||||| ||||| ||||| ||||| || || ||||| || ||| Sbjct: 1464 agccctgccctgcaagatggaaggcttgagagtacatccgacctgacgggaagagccggg 1405 Query: 506 cacactcctcacgcttcagatccaagtatgctatgcactgaggataaggtcggtcaaa 563 ||||| || ||||| ||||||||||||||||| ||||| || || ||||||||||| Sbjct: 1404 agcactcttcgcgctttagatccaagtatgctatacactgtgggtagggtcggtcaaa 1347
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 297 bits (150), Expect = 2e-77 Identities = 351/418 (83%) Strand = Plus / Minus Query: 146 gttgctttatggtcaattcagctctcagatgcagtaccccattgatgaagaagaggctat 205 |||||||||| |||||||||||||||||||||| || || | || |||||||||||| | Sbjct: 9086815 gttgctttatcgtcaattcagctctcagatgcaacacgccgtcgaggaagaagaggctgt 9086756 Query: 206 catcagccataaacgaaggccagggaattgcaaagagattgcggtagccaaccgccttcc 265 | |||||||| |||| | ||| || || ||||||||||| | ||| ||||||||||||| Sbjct: 9086755 cgtcagccatgaacgtcgaccatggtatcgcaaagagattcctgtaaccaaccgccttcc 9086696 Query: 266 caccagtgaaggtgtagcagcccttgtacttgctgacaaactcacccgacggccttgtcc 325 |||| ||||| |||||| |||||||||||||| |||||||| || ||||| ||||||| Sbjct: 9086695 caccggtgaacgtgtagttacccttgtacttgctcacaaactctcctgacggtcttgtcc 9086636 Query: 326 ttgcagcaaactcgtagtccacggtaacacttgttgagcctttctcttgcatccctaaga 385 ||||||||||||| || || || || || || ||||||| ||||||||||||||||||| Sbjct: 9086635 ttgcagcaaactcataatctactgtcacgctcattgagcccttctcttgcatccctaaga 9086576 Query: 386 agagaccaaagcagtggaaagcgctttgctggtccatgttgcaatgtgctgagaggaaga 445 ||||||| ||||||| ||| | || ||||| |||||||| || |||||||||||||||| Sbjct: 9086575 agagaccgaagcagtagaacgtactctgctgttccatgttacagtgtgctgagaggaaga 9086516 Query: 446 atccctgtccagcaagatggaatgcttgcgagtaaatccgcccagatgggaatagtcggc 505 | ||||| || ||||||||||| ||||| ||||| ||||| || || ||||| || ||| Sbjct: 9086515 agccctgccctgcaagatggaaggcttgagagtacatccgacctgacgggaagagccggg 9086456 Query: 506 cacactcctcacgcttcagatccaagtatgctatgcactgaggataaggtcggtcaaa 563 ||||| || ||||| ||||||||||||||||| ||||| || || ||||||||||| Sbjct: 9086455 agcactcttcgcgctttagatccaagtatgctatacactgtgggtagggtcggtcaaa 9086398
>dbj|AP006160.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1178F07 Length = 144454 Score = 297 bits (150), Expect = 2e-77 Identities = 351/418 (83%) Strand = Plus / Minus Query: 146 gttgctttatggtcaattcagctctcagatgcagtaccccattgatgaagaagaggctat 205 |||||||||| |||||||||||||||||||||| || || | || |||||||||||| | Sbjct: 127261 gttgctttatcgtcaattcagctctcagatgcaacacgccgtcgaggaagaagaggctgt 127202 Query: 206 catcagccataaacgaaggccagggaattgcaaagagattgcggtagccaaccgccttcc 265 | |||||||| |||| | ||| || || ||||||||||| | ||| ||||||||||||| Sbjct: 127201 cgtcagccatgaacgtcgaccatggtatcgcaaagagattcctgtaaccaaccgccttcc 127142 Query: 266 caccagtgaaggtgtagcagcccttgtacttgctgacaaactcacccgacggccttgtcc 325 |||| ||||| |||||| |||||||||||||| |||||||| || ||||| ||||||| Sbjct: 127141 caccggtgaacgtgtagttacccttgtacttgctcacaaactctcctgacggtcttgtcc 127082 Query: 326 ttgcagcaaactcgtagtccacggtaacacttgttgagcctttctcttgcatccctaaga 385 ||||||||||||| || || || || || || ||||||| ||||||||||||||||||| Sbjct: 127081 ttgcagcaaactcataatctactgtcacgctcattgagcccttctcttgcatccctaaga 127022 Query: 386 agagaccaaagcagtggaaagcgctttgctggtccatgttgcaatgtgctgagaggaaga 445 ||||||| ||||||| ||| | || ||||| |||||||| || |||||||||||||||| Sbjct: 127021 agagaccgaagcagtagaacgtactctgctgttccatgttacagtgtgctgagaggaaga 126962 Query: 446 atccctgtccagcaagatggaatgcttgcgagtaaatccgcccagatgggaatagtcggc 505 | ||||| || ||||||||||| ||||| ||||| ||||| || || ||||| || ||| Sbjct: 126961 agccctgccctgcaagatggaaggcttgagagtacatccgacctgacgggaagagccggg 126902 Query: 506 cacactcctcacgcttcagatccaagtatgctatgcactgaggataaggtcggtcaaa 563 ||||| || ||||| ||||||||||||||||| ||||| || || ||||||||||| Sbjct: 126901 agcactcttcgcgctttagatccaagtatgctatacactgtgggtagggtcggtcaaa 126844
>dbj|AP005803.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0060K08 Length = 159626 Score = 297 bits (150), Expect = 2e-77 Identities = 351/418 (83%) Strand = Plus / Minus Query: 146 gttgctttatggtcaattcagctctcagatgcagtaccccattgatgaagaagaggctat 205 |||||||||| |||||||||||||||||||||| || || | || |||||||||||| | Sbjct: 159424 gttgctttatcgtcaattcagctctcagatgcaacacgccgtcgaggaagaagaggctgt 159365 Query: 206 catcagccataaacgaaggccagggaattgcaaagagattgcggtagccaaccgccttcc 265 | |||||||| |||| | ||| || || ||||||||||| | ||| ||||||||||||| Sbjct: 159364 cgtcagccatgaacgtcgaccatggtatcgcaaagagattcctgtaaccaaccgccttcc 159305 Query: 266 caccagtgaaggtgtagcagcccttgtacttgctgacaaactcacccgacggccttgtcc 325 |||| ||||| |||||| |||||||||||||| |||||||| || ||||| ||||||| Sbjct: 159304 caccggtgaacgtgtagttacccttgtacttgctcacaaactctcctgacggtcttgtcc 159245 Query: 326 ttgcagcaaactcgtagtccacggtaacacttgttgagcctttctcttgcatccctaaga 385 ||||||||||||| || || || || || || ||||||| ||||||||||||||||||| Sbjct: 159244 ttgcagcaaactcataatctactgtcacgctcattgagcccttctcttgcatccctaaga 159185 Query: 386 agagaccaaagcagtggaaagcgctttgctggtccatgttgcaatgtgctgagaggaaga 445 ||||||| ||||||| ||| | || ||||| |||||||| || |||||||||||||||| Sbjct: 159184 agagaccgaagcagtagaacgtactctgctgttccatgttacagtgtgctgagaggaaga 159125 Query: 446 atccctgtccagcaagatggaatgcttgcgagtaaatccgcccagatgggaatagtcggc 505 | ||||| || ||||||||||| ||||| ||||| ||||| || || ||||| || ||| Sbjct: 159124 agccctgccctgcaagatggaaggcttgagagtacatccgacctgacgggaagagccggg 159065 Query: 506 cacactcctcacgcttcagatccaagtatgctatgcactgaggataaggtcggtcaaa 563 ||||| || ||||| ||||||||||||||||| ||||| || || ||||||||||| Sbjct: 159064 agcactcttcgcgctttagatccaagtatgctatacactgtgggtagggtcggtcaaa 159007
>dbj|AK100835.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023123D22, full insert sequence Length = 2036 Score = 297 bits (150), Expect = 2e-77 Identities = 351/418 (83%) Strand = Plus / Minus Query: 146 gttgctttatggtcaattcagctctcagatgcagtaccccattgatgaagaagaggctat 205 |||||||||| |||||||||||||||||||||| || || | || |||||||||||| | Sbjct: 1764 gttgctttatcgtcaattcagctctcagatgcaacacgccgtcgaggaagaagaggctgt 1705 Query: 206 catcagccataaacgaaggccagggaattgcaaagagattgcggtagccaaccgccttcc 265 | |||||||| |||| | ||| || || ||||||||||| | ||| ||||||||||||| Sbjct: 1704 cgtcagccatgaacgtcgaccatggtatcgcaaagagattcctgtaaccaaccgccttcc 1645 Query: 266 caccagtgaaggtgtagcagcccttgtacttgctgacaaactcacccgacggccttgtcc 325 |||| ||||| |||||| |||||||||||||| |||||||| || ||||| ||||||| Sbjct: 1644 caccggtgaacgtgtagttacccttgtacttgctcacaaactctcctgacggtcttgtcc 1585 Query: 326 ttgcagcaaactcgtagtccacggtaacacttgttgagcctttctcttgcatccctaaga 385 ||||||||||||| || || || || || || ||||||| ||||||||||||||||||| Sbjct: 1584 ttgcagcaaactcataatctactgtcacgctcattgagcccttctcttgcatccctaaga 1525 Query: 386 agagaccaaagcagtggaaagcgctttgctggtccatgttgcaatgtgctgagaggaaga 445 ||||||| ||||||| ||| | || ||||| |||||||| || |||||||||||||||| Sbjct: 1524 agagaccgaagcagtagaacgtactctgctgttccatgttacagtgtgctgagaggaaga 1465 Query: 446 atccctgtccagcaagatggaatgcttgcgagtaaatccgcccagatgggaatagtcggc 505 | ||||| || ||||||||||| ||||| ||||| ||||| || || ||||| || ||| Sbjct: 1464 agccctgccctgcaagatggaaggcttgagagtacatccgacctgacgggaagagccggg 1405 Query: 506 cacactcctcacgcttcagatccaagtatgctatgcactgaggataaggtcggtcaaa 563 ||||| || ||||| ||||||||||||||||| ||||| || || ||||||||||| Sbjct: 1404 agcactcttcgcgctttagatccaagtatgctatacactgtgggtagggtcggtcaaa 1347
>dbj|AK099509.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013029E15, full insert sequence Length = 1276 Score = 297 bits (150), Expect = 2e-77 Identities = 351/418 (83%) Strand = Plus / Minus Query: 146 gttgctttatggtcaattcagctctcagatgcagtaccccattgatgaagaagaggctat 205 |||||||||| |||||||||||||||||||||| || || | || |||||||||||| | Sbjct: 1083 gttgctttatcgtcaattcagctctcagatgcaacacgccgtcgaggaagaagaggctgt 1024 Query: 206 catcagccataaacgaaggccagggaattgcaaagagattgcggtagccaaccgccttcc 265 | |||||||| |||| | ||| || || ||||||||||| | ||| ||||||||||||| Sbjct: 1023 cgtcagccatgaacgtcgaccatggtatcgcaaagagattcctgtaaccaaccgccttcc 964 Query: 266 caccagtgaaggtgtagcagcccttgtacttgctgacaaactcacccgacggccttgtcc 325 |||| ||||| |||||| |||||||||||||| |||||||| || ||||| ||||||| Sbjct: 963 caccggtgaacgtgtagttacccttgtacttgctcacaaactctcctgacggtcttgtcc 904 Query: 326 ttgcagcaaactcgtagtccacggtaacacttgttgagcctttctcttgcatccctaaga 385 ||||||||||||| || || || || || || ||||||| ||||||||||||||||||| Sbjct: 903 ttgcagcaaactcataatctactgtcacgctcattgagcccttctcttgcatccctaaga 844 Query: 386 agagaccaaagcagtggaaagcgctttgctggtccatgttgcaatgtgctgagaggaaga 445 ||||||| ||||||| ||| | || ||||| |||||||| || |||||||||||||||| Sbjct: 843 agagaccgaagcagtagaacgtactctgctgttccatgttacagtgtgctgagaggaaga 784 Query: 446 atccctgtccagcaagatggaatgcttgcgagtaaatccgcccagatgggaatagtcggc 505 | ||||| || ||||||||||| ||||| ||||| ||||| || || ||||| || ||| Sbjct: 783 agccctgccctgcaagatggaaggcttgagagtacatccgacctgacgggaagagccggg 724 Query: 506 cacactcctcacgcttcagatccaagtatgctatgcactgaggataaggtcggtcaaa 563 ||||| || ||||| ||||||||||||||||| ||||| || || ||||||||||| Sbjct: 723 agcactcttcgcgctttagatccaagtatgctatacactgtgggtagggtcggtcaaa 666
>dbj|AK061699.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-D06, full insert sequence Length = 1345 Score = 297 bits (150), Expect = 2e-77 Identities = 351/418 (83%) Strand = Plus / Minus Query: 146 gttgctttatggtcaattcagctctcagatgcagtaccccattgatgaagaagaggctat 205 |||||||||| |||||||||||||||||||||| || || | || |||||||||||| | Sbjct: 1089 gttgctttatcgtcaattcagctctcagatgcaacacgccgtcgaggaagaagaggctgt 1030 Query: 206 catcagccataaacgaaggccagggaattgcaaagagattgcggtagccaaccgccttcc 265 | |||||||| |||| | ||| || || ||||||||||| | ||| ||||||||||||| Sbjct: 1029 cgtcagccatgaacgtcgaccatggtatcgcaaagagattcctgtaaccaaccgccttcc 970 Query: 266 caccagtgaaggtgtagcagcccttgtacttgctgacaaactcacccgacggccttgtcc 325 |||| ||||| |||||| |||||||||||||| |||||||| || ||||| ||||||| Sbjct: 969 caccggtgaacgtgtagttacccttgtacttgctcacaaactctcctgacggtcttgtcc 910 Query: 326 ttgcagcaaactcgtagtccacggtaacacttgttgagcctttctcttgcatccctaaga 385 ||||||||||||| || || || || || || ||||||| ||||||||||||||||||| Sbjct: 909 ttgcagcaaactcataatctactgtcacgctcattgagcccttctcttgcatccctaaga 850 Query: 386 agagaccaaagcagtggaaagcgctttgctggtccatgttgcaatgtgctgagaggaaga 445 ||||||| ||||||| ||| | || ||||| |||||||| || |||||||||||||||| Sbjct: 849 agagaccgaagcagtagaacgtactctgctgttccatgttacagtgtgctgagaggaaga 790 Query: 446 atccctgtccagcaagatggaatgcttgcgagtaaatccgcccagatgggaatagtcggc 505 | ||||| || ||||||||||| ||||| ||||| ||||| || || ||||| || ||| Sbjct: 789 agccctgccctgcaagatggaaggcttgagagtacatccgacctgacgggaagagccggg 730 Query: 506 cacactcctcacgcttcagatccaagtatgctatgcactgaggataaggtcggtcaaa 563 ||||| || ||||| ||||||||||||||||| ||||| || || ||||||||||| Sbjct: 729 agcactcttcgcgctttagatccaagtatgctatacactgtgggtagggtcggtcaaa 672
>emb|AJ417532.1|OSA417532 Oryza sativa partial mRNA for hypothetical protein (xd24 gene) Length = 644 Score = 276 bits (139), Expect = 9e-71 Identities = 346/415 (83%) Strand = Plus / Minus Query: 149 gctttatggtcaattcagctctcagatgcagtaccccattgatgaagaagaggctatcat 208 ||||||| |||||||||||||||||||||| || || | || |||||||||||| || | Sbjct: 480 gctttatcgtcaattcagctctcagatgcaacacgccgtcgaggaagaagaggctgtcgt 421 Query: 209 cagccataaacgaaggccagggaattgcaaagagattgcggtagccaaccgccttcccac 268 ||||||| |||| | ||| || || ||||||||||| | ||| || ||||||||||||| Sbjct: 420 cagccatgaacgtcgaccatggtatcgcaaagagattcctgtaacccaccgccttcccac 361 Query: 269 cagtgaaggtgtagcagcccttgtacttgctgacaaactcacccgacggccttgtccttg 328 | ||||| |||||| |||||||||||||| |||||||| || ||||| |||||||||| Sbjct: 360 cggtgaacgtgtagttacccttgtacttgctcacaaactctcctgacgggcttgtccttg 301 Query: 329 cagcaaactcgtagtccacggtaacacttgttgagcctttctcttgcatccctaagaaga 388 |||||||||| || || || || || || ||||||| |||||||||||||||||||||| Sbjct: 300 cagcaaactcataatctactgtcacgctcattgagcccttctcttgcatccctaagaaga 241 Query: 389 gaccaaagcagtggaaagcgctttgctggtccatgttgcaatgtgctgagaggaagaatc 448 |||| ||||||| ||| | || ||||| |||||||| || ||||||||||||||||| | Sbjct: 240 gaccgaagcagtagaacgtactctgctgttccatgttacagtgtgctgagaggaagaagc 181 Query: 449 cctgtccagcaagatggaatgcttgcgagtaaatccgcccagatgggaatagtcggccac 508 |||| || ||||||||||| ||||| ||||| ||||| || || ||||| || ||| | Sbjct: 180 cctgccctgcaagatggaaggcttgagagtacatccgacctgacgggaagagccgggagc 121 Query: 509 actcctcacgcttcagatccaagtatgctatgcactgaggataaggtcggtcaaa 563 |||| || ||||| ||| ||||||||||||| ||||| || || ||||||||||| Sbjct: 120 actcttcgcgctttagacccaagtatgctatacactgtgggtagggtcggtcaaa 66
>ref|NM_130189.2| Arabidopsis thaliana protein binding AT2G46260 mRNA, complete cds Length = 1999 Score = 101 bits (51), Expect = 3e-18 Identities = 75/83 (90%) Strand = Plus / Minus Query: 364 cctttctcttgcatccctaagaagagaccaaagcagtggaaagcgctttgctggtccatg 423 |||||||||||||| || | ||| || |||||||||||||| | |||||||||||||||| Sbjct: 1591 cctttctcttgcattccgaggaatagcccaaagcagtggaacgagctttgctggtccatg 1532 Query: 424 ttgcaatgtgctgagaggaagaa 446 ||||| ||||||||||||||||| Sbjct: 1531 ttgcagtgtgctgagaggaagaa 1509
>gb|AY079398.1| Arabidopsis thaliana unknown protein (At2g46260) mRNA, complete cds Length = 1717 Score = 101 bits (51), Expect = 3e-18 Identities = 75/83 (90%) Strand = Plus / Minus Query: 364 cctttctcttgcatccctaagaagagaccaaagcagtggaaagcgctttgctggtccatg 423 |||||||||||||| || | ||| || |||||||||||||| | |||||||||||||||| Sbjct: 1448 cctttctcttgcattccgaggaatagcccaaagcagtggaacgagctttgctggtccatg 1389 Query: 424 ttgcaatgtgctgagaggaagaa 446 ||||| ||||||||||||||||| Sbjct: 1388 ttgcagtgtgctgagaggaagaa 1366
>gb|AY046011.1| Arabidopsis thaliana unknown protein (At2g46260) mRNA, complete cds Length = 2009 Score = 101 bits (51), Expect = 3e-18 Identities = 75/83 (90%) Strand = Plus / Minus Query: 364 cctttctcttgcatccctaagaagagaccaaagcagtggaaagcgctttgctggtccatg 423 |||||||||||||| || | ||| || |||||||||||||| | |||||||||||||||| Sbjct: 1591 cctttctcttgcattccgaggaatagcccaaagcagtggaacgagctttgctggtccatg 1532 Query: 424 ttgcaatgtgctgagaggaagaa 446 ||||| ||||||||||||||||| Sbjct: 1531 ttgcagtgtgctgagaggaagaa 1509
>gb|AC005397.3| Arabidopsis thaliana chromosome 2 clone T3F17 map CIC02E07, complete sequence Length = 110149 Score = 101 bits (51), Expect = 3e-18 Identities = 75/83 (90%) Strand = Plus / Plus Query: 364 cctttctcttgcatccctaagaagagaccaaagcagtggaaagcgctttgctggtccatg 423 |||||||||||||| || | ||| || |||||||||||||| | |||||||||||||||| Sbjct: 25343 cctttctcttgcattccgaggaatagcccaaagcagtggaacgagctttgctggtccatg 25402 Query: 424 ttgcaatgtgctgagaggaagaa 446 ||||| ||||||||||||||||| Sbjct: 25403 ttgcagtgtgctgagaggaagaa 25425
>dbj|AK221929.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL22-40-I02 Length = 1292 Score = 101 bits (51), Expect = 3e-18 Identities = 75/83 (90%) Strand = Plus / Minus Query: 364 cctttctcttgcatccctaagaagagaccaaagcagtggaaagcgctttgctggtccatg 423 |||||||||||||| || | ||| || |||||||||||||| | |||||||||||||||| Sbjct: 925 cctttctcttgcattccgaggaatagcccaaagcagtggaacgagctttgctggtccatg 866 Query: 424 ttgcaatgtgctgagaggaagaa 446 ||||| ||||||||||||||||| Sbjct: 865 ttgcagtgtgctgagaggaagaa 843
>emb|BX820005.1|CNS0A7ZF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS5ZF03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1890 Score = 101 bits (51), Expect = 3e-18 Identities = 75/83 (90%) Strand = Plus / Minus Query: 364 cctttctcttgcatccctaagaagagaccaaagcagtggaaagcgctttgctggtccatg 423 |||||||||||||| || | ||| || |||||||||||||| | |||||||||||||||| Sbjct: 1514 cctttctcttgcattccgaggaatagcccaaagcagtggaacgagctttgctggtccatg 1455 Query: 424 ttgcaatgtgctgagaggaagaa 446 ||||| ||||||||||||||||| Sbjct: 1454 ttgcagtgtgctgagaggaagaa 1432
>gb|AY084542.1| Arabidopsis thaliana clone 111153 mRNA, complete sequence Length = 1925 Score = 101 bits (51), Expect = 3e-18 Identities = 75/83 (90%) Strand = Plus / Minus Query: 364 cctttctcttgcatccctaagaagagaccaaagcagtggaaagcgctttgctggtccatg 423 |||||||||||||| || | ||| || |||||||||||||| | |||||||||||||||| Sbjct: 1548 cctttctcttgcattccgaggaatagcccaaagcagtggaacgagctttgctggtccatg 1489 Query: 424 ttgcaatgtgctgagaggaagaa 446 ||||| ||||||||||||||||| Sbjct: 1488 ttgcagtgtgctgagaggaagaa 1466
>ref|NM_116025.2| Arabidopsis thaliana ATPOB1; protein binding AT3G61600 (ATPOB1) transcript variant AT3G61600.2 mRNA, complete cds Length = 1965 Score = 56.0 bits (28), Expect = 2e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 364 cctttctcttgcatccctaagaagagaccaaagcagtggaaagcgctttgctggtccatg 423 |||||||| |||||||||| ||| || || || |||||||| | ||| || ||||||||| Sbjct: 1579 cctttctcctgcatccctaggaacagcccgaaacagtggaacgagctctgttggtccatg 1520 Query: 424 ttgcaatgtgctgagaggaa 443 ||||| || ||||| ||||| Sbjct: 1519 ttgcagtgagctgacaggaa 1500
>ref|NM_180402.1| Arabidopsis thaliana ATPOB1; protein binding AT3G61600 (ATPOB1) transcript variant AT3G61600.1 mRNA, complete cds Length = 2178 Score = 56.0 bits (28), Expect = 2e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 364 cctttctcttgcatccctaagaagagaccaaagcagtggaaagcgctttgctggtccatg 423 |||||||| |||||||||| ||| || || || |||||||| | ||| || ||||||||| Sbjct: 1579 cctttctcctgcatccctaggaacagcccgaaacagtggaacgagctctgttggtccatg 1520 Query: 424 ttgcaatgtgctgagaggaa 443 ||||| || ||||| ||||| Sbjct: 1519 ttgcagtgagctgacaggaa 1500
>gb|AF337913.1| Arabidopsis thaliana At3g61600 mRNA sequence Length = 2132 Score = 56.0 bits (28), Expect = 2e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 364 cctttctcttgcatccctaagaagagaccaaagcagtggaaagcgctttgctggtccatg 423 |||||||| |||||||||| ||| || || || |||||||| | ||| || ||||||||| Sbjct: 1580 cctttctcctgcatccctaggaacagcccgaaacagtggaacgagctctgttggtccatg 1521 Query: 424 ttgcaatgtgctgagaggaa 443 ||||| || ||||| ||||| Sbjct: 1520 ttgcagtgagctgacaggaa 1501
>emb|AL132959.1|ATF15G16 Arabidopsis thaliana DNA chromosome 3, BAC clone F15G16 Length = 104868 Score = 56.0 bits (28), Expect = 2e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 364 cctttctcttgcatccctaagaagagaccaaagcagtggaaagcgctttgctggtccatg 423 |||||||| |||||||||| ||| || || || |||||||| | ||| || ||||||||| Sbjct: 9081 cctttctcctgcatccctaggaacagcccgaaacagtggaacgagctctgttggtccatg 9022 Query: 424 ttgcaatgtgctgagaggaa 443 ||||| || ||||| ||||| Sbjct: 9021 ttgcagtgagctgacaggaa 9002
>emb|AL132962.1|ATF2A19 Arabidopsis thaliana DNA chromosome 3, BAC clone F2A19 Length = 95993 Score = 56.0 bits (28), Expect = 2e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 364 cctttctcttgcatccctaagaagagaccaaagcagtggaaagcgctttgctggtccatg 423 |||||||| |||||||||| ||| || || || |||||||| | ||| || ||||||||| Sbjct: 91862 cctttctcctgcatccctaggaacagcccgaaacagtggaacgagctctgttggtccatg 91803 Query: 424 ttgcaatgtgctgagaggaa 443 ||||| || ||||| ||||| Sbjct: 91802 ttgcagtgagctgacaggaa 91783
>gb|AF292397.1|AF292397 Arabidopsis thaliana POZ/BTB containing-protein AtPOB1 mRNA, complete cds Length = 1909 Score = 56.0 bits (28), Expect = 2e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 364 cctttctcttgcatccctaagaagagaccaaagcagtggaaagcgctttgctggtccatg 423 |||||||| |||||||||| ||| || || || |||||||| | ||| || ||||||||| Sbjct: 1530 cctttctcctgcatccctaggaacagcccgaaacagtggaacgagctctgttggtccatg 1471 Query: 424 ttgcaatgtgctgagaggaa 443 ||||| || ||||| ||||| Sbjct: 1470 ttgcagtgagctgacaggaa 1451
>gb|AC166050.3| Mus musculus BAC clone RP24-138A17 from chromosome 9, complete sequence Length = 142457 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 451 tgtccagcaagatggaatgctt 472 |||||||||||||||||||||| Sbjct: 43712 tgtccagcaagatggaatgctt 43691
>gb|AY421766.1| Human coxsackievirus A8 strain Donovan, complete genome Length = 7396 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 98 tgtgcaaggacacagatgaggt 119 |||||||||||||||||||||| Sbjct: 2392 tgtgcaaggacacagatgaggt 2413
>gb|AC131080.13| Mus musculus chromosome 16, clone RP23-438H16, complete sequence Length = 192584 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 36 aaacatgtttgaatgacacaagattt 61 ||||||||||||||| |||||||||| Sbjct: 174114 aaacatgtttgaatggcacaagattt 174139
>gb|AC091044.9| Homo sapiens chromosome 18, clone RP11-694H12, complete sequence Length = 172179 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 33 taaaaacatgtttgaatgacac 54 |||||||||||||||||||||| Sbjct: 38091 taaaaacatgtttgaatgacac 38070
>gb|AC105224.8| Homo sapiens chromosome 18, clone RP11-689E3, complete sequence Length = 199051 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 33 taaaaacatgtttgaatgacac 54 |||||||||||||||||||||| Sbjct: 175784 taaaaacatgtttgaatgacac 175763
>emb|CT025678.6| Mouse DNA sequence from clone RP24-153A6 on chromosome 9, complete sequence Length = 175790 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 451 tgtccagcaagatggaatgctt 472 |||||||||||||||||||||| Sbjct: 36783 tgtccagcaagatggaatgctt 36762
>gb|AC105001.3| Homo sapiens chromosome 8, clone CTD-2135J3, complete sequence Length = 157442 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 38 acatgtttgaatgacacaaga 58 ||||||||||||||||||||| Sbjct: 126506 acatgtttgaatgacacaaga 126486
>gb|AC011008.10| Homo sapiens chromosome 8, clone RP11-177H2, complete sequence Length = 162245 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 38 acatgtttgaatgacacaaga 58 ||||||||||||||||||||| Sbjct: 130965 acatgtttgaatgacacaaga 130985
>ref|XM_526378.1| PREDICTED: Pan troglodytes similar to KIAA1613 protein (LOC470994), mRNA Length = 4083 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 cccattgatgaagaagaggc 202 |||||||||||||||||||| Sbjct: 1596 cccattgatgaagaagaggc 1577
>ref|XM_418469.1| PREDICTED: Gallus gallus similar to zinc finger protein 27 (LOC420364), mRNA Length = 5928 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 caagattttccatactgaag 73 |||||||||||||||||||| Sbjct: 2793 caagattttccatactgaag 2812
>ref|XM_418468.1| PREDICTED: Gallus gallus similar to Potassium voltage-gated channel subfamily H member 7 (Voltage-gated potassium channel subunit Kv11.3) (Ether-a-go-go related gene potassium channel 3) (HERG-3) (Ether-a-go-go related protein 3) (Eag related protein 3) (LOC420363), mRNA Length = 4283 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 caagattttccatactgaag 73 |||||||||||||||||||| Sbjct: 3537 caagattttccatactgaag 3556
>ref|NM_020949.1| Homo sapiens solute carrier family 7 (cationic amino acid transporter, y+ system), member 14 (SLC7A14), mRNA Length = 2909 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 cccattgatgaagaagaggc 202 |||||||||||||||||||| Sbjct: 1025 cccattgatgaagaagaggc 1006
>ref|XM_545285.2| PREDICTED: Canis familiaris similar to solute carrier family 7 (cationic amino acid transporter, y+ system), member 14 (LOC488161), mRNA Length = 2541 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 cccattgatgaagaagaggc 202 |||||||||||||||||||| Sbjct: 714 cccattgatgaagaagaggc 695
>gb|AC145897.3| Pan troglodytes BAC clone RP43-8K4 from 7, complete sequence Length = 153704 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 tgaagaagaggctatcatca 210 |||||||||||||||||||| Sbjct: 119985 tgaagaagaggctatcatca 119966
>gb|AC144916.3| Homo sapiens BAC clone RP11-15L7 from UL, complete sequence Length = 158759 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 tgaagaagaggctatcatca 210 |||||||||||||||||||| Sbjct: 535 tgaagaagaggctatcatca 516
>emb|AL596132.7| Human DNA sequence from clone RP11-30A1 on chromosome 9 Contains part of the NTRK2 gene for Neurotrophic tyrosine kinase, receptor, type 2 (TRKB), complete sequence Length = 124156 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 507 acactcctcacgcttcagatccaa 530 ||||||||||| |||||||||||| Sbjct: 59749 acactcctcacccttcagatccaa 59726
>emb|AL662812.12| Mouse DNA sequence from clone RP23-48A2 on chromosome 11 Contains the gene for a novel protein similar to smoothelin Smtn, three novel genes, the Mybbp1a gene for MYB binding protein (P160) 1a, a ribosomal protein 7a (Rpl7a) pseudogene, the 5' end of the Ube2g1 gene for ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, C. elegans) and four CpG islands, complete sequence Length = 258521 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 376 atccctaagaagagaccaaagcag 399 ||||| |||||||||||||||||| Sbjct: 125510 atcccaaagaagagaccaaagcag 125487
>dbj|AK122655.1| Homo sapiens cDNA FLJ16089 fis, clone NT2RP7009225, moderately similar to HIGH-AFFINITY CATIONIC AMINO ACID TRANSPORTER-1 Length = 2909 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 cccattgatgaagaagaggc 202 |||||||||||||||||||| Sbjct: 1025 cccattgatgaagaagaggc 1006
>emb|CR599969.1| full-length cDNA clone CS0DC002YB14 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 2829 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 cccattgatgaagaagaggc 202 |||||||||||||||||||| Sbjct: 1027 cccattgatgaagaagaggc 1008
>gb|AC174221.4| Mus musculus BAC clone RP24-237K1 from chromosome y, complete sequence Length = 171789 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 gtgtgtgcaaggacacagat 114 |||||||||||||||||||| Sbjct: 96375 gtgtgtgcaaggacacagat 96394
>gb|AE008532.1|AE008532 Streptococcus pneumoniae R6 section 148 of 184 of the complete genome Length = 10393 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 aaagagattgcggtagccaa 256 |||||||||||||||||||| Sbjct: 4901 aaagagattgcggtagccaa 4882
>gb|AC109039.10| Rattus norvegicus 1 BAC CH230-145B9 (Children's Hospital Oakland Research Institute) complete sequence Length = 215780 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 aactgaggtgtgtgcaagga 107 |||||||||||||||||||| Sbjct: 9963 aactgaggtgtgtgcaagga 9982
>gb|BC022968.1| Homo sapiens solute carrier family 7 (cationic amino acid transporter, y+ system), member 14, mRNA (cDNA clone MGC:30018 IMAGE:4180324), complete cds Length = 2524 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 cccattgatgaagaagaggc 202 |||||||||||||||||||| Sbjct: 646 cccattgatgaagaagaggc 627
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 gaagaatccctgtccagcaa 460 |||||||||||||||||||| Sbjct: 1759339 gaagaatccctgtccagcaa 1759358
>emb|CR354256.1| Gallus gallus finished cDNA, clone ChEST295o12 Length = 1069 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 caagattttccatactgaag 73 |||||||||||||||||||| Sbjct: 322 caagattttccatactgaag 341
>gb|AC007978.15|AC007978 Mus musculus BAC MGS3-335O7 (Genome Systems Mouse BAC Library) complete sequence Length = 183936 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 gtgtgtgcaaggacacagat 114 |||||||||||||||||||| Sbjct: 66220 gtgtgtgcaaggacacagat 66239
>gb|AC073636.4| Homo sapiens BAC clone RP11-279N12 from 2, complete sequence Length = 151018 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 ttgttgagcctttctcttgc 375 |||||||||||||||||||| Sbjct: 62905 ttgttgagcctttctcttgc 62886
>gb|AC008041.5| Homo sapiens 3 BAC RPCI11-469J4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 178896 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 cccattgatgaagaagaggc 202 |||||||||||||||||||| Sbjct: 83031 cccattgatgaagaagaggc 83050
>gb|AC148974.5| Mus musculus BAC clone RP24-165K23 from chromosome y, complete sequence Length = 200783 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 gtgtgtgcaaggacacagat 114 |||||||||||||||||||| Sbjct: 4706 gtgtgtgcaaggacacagat 4687
>gb|AC005850.1| Arabidopsis thaliana chromosome I BAC T25B24 genomic sequence, complete sequence Length = 84432 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 catgtttgaatgacacaagatttt 62 ||||||||||| |||||||||||| Sbjct: 34322 catgtttgaataacacaagatttt 34299
>dbj|AB046833.1| Homo sapiens mRNA for KIAA1613 protein, partial cds Length = 4573 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 cccattgatgaagaagaggc 202 |||||||||||||||||||| Sbjct: 481 cccattgatgaagaagaggc 462 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,039,812 Number of Sequences: 3902068 Number of extensions: 5039812 Number of successful extensions: 96276 Number of sequences better than 10.0: 57 Number of HSP's better than 10.0 without gapping: 57 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 96096 Number of HSP's gapped (non-prelim): 172 length of query: 663 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 640 effective length of database: 17,143,297,704 effective search space: 10971710530560 effective search space used: 10971710530560 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)