Clone Name | rbasd26j21 |
---|---|
Clone Library Name | barley_pub |
>emb|BX007544.1|CNS08DZG Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA12CC12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 171 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Plus Query: 200 acagcagcagcaccaccaccgg 221 |||||||||||||||||||||| Sbjct: 50 acagcagcagcaccaccaccgg 71
>ref|XM_574232.1| PREDICTED: Rattus norvegicus dipeptidase 2 (predicted) (Dpep2_predicted), mRNA Length = 1533 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Minus Query: 198 taacagcagcagcaccaccacc 219 |||||||||||||||||||||| Sbjct: 75 taacagcagcagcaccaccacc 54
>gb|BC088195.1| Rattus norvegicus dipeptidase 2, mRNA (cDNA clone MGC:108872 IMAGE:7374282), complete cds Length = 1658 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Minus Query: 198 taacagcagcagcaccaccacc 219 |||||||||||||||||||||| Sbjct: 169 taacagcagcagcaccaccacc 148
>ref|NM_001011928.1| Rattus norvegicus dipeptidase 2 (Dpep2), mRNA Length = 1658 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Minus Query: 198 taacagcagcagcaccaccacc 219 |||||||||||||||||||||| Sbjct: 169 taacagcagcagcaccaccacc 148
>gb|AC154808.2| Mus musculus BAC clone RP24-512K19 from chromosome 13, complete sequence Length = 187080 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Plus Query: 199 aacagcagcagcaccaccacc 219 ||||||||||||||||||||| Sbjct: 48628 aacagcagcagcaccaccacc 48648
>gb|AY186659.1| Cancer magister clone Cma31 microsatellite sequence Length = 405 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Minus Query: 199 aacagcagcagcaccaccacc 219 ||||||||||||||||||||| Sbjct: 207 aacagcagcagcaccaccacc 187
>ref|XM_951143.1| Neurospora crassa OR74A hypothetical protein (NCU08793.1) partial mRNA Length = 1359 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Plus Query: 199 aacagcagcagcaccaccacc 219 ||||||||||||||||||||| Sbjct: 154 aacagcagcagcaccaccacc 174
>ref|XM_959922.1| Neurospora crassa OR74A hypothetical protein (NCU02612.1) partial mRNA Length = 3528 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Plus Query: 199 aacagcagcagcaccaccacc 219 ||||||||||||||||||||| Sbjct: 3179 aacagcagcagcaccaccacc 3199
>ref|XM_330909.1| Neurospora crassa OR74A hypothetical protein (NCU08793.1) partial mRNA Length = 1359 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Plus Query: 199 aacagcagcagcaccaccacc 219 ||||||||||||||||||||| Sbjct: 154 aacagcagcagcaccaccacc 174
>ref|XM_331810.1| Neurospora crassa OR74A hypothetical protein (NCU02612.1) partial mRNA Length = 3528 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Plus Query: 199 aacagcagcagcaccaccacc 219 ||||||||||||||||||||| Sbjct: 3179 aacagcagcagcaccaccacc 3199
>gb|DQ459987.1| Pacifastacus leniusculus intracellular fatty acid binding protein mRNA, complete cds Length = 1067 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Plus Query: 199 aacagcagcagcaccaccacc 219 ||||||||||||||||||||| Sbjct: 583 aacagcagcagcaccaccacc 603
>gb|AY446894.1| Human herpesvirus 5 strain Merlin, complete genome Length = 235645 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Minus Query: 199 aacagcagcagcaccaccacc 219 ||||||||||||||||||||| Sbjct: 115706 aacagcagcagcaccaccacc 115686
>ref|XM_545636.2| PREDICTED: Canis familiaris similar to membrane-associated ring finger (C3HC4) 4 (LOC488515), mRNA Length = 1572 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Minus Query: 199 aacagcagcagcaccaccacc 219 ||||||||||||||||||||| Sbjct: 379 aacagcagcagcaccaccacc 359
>gb|DQ377687.1| Lactococcus lactis subsp. cremoris strain MG1363 branched-chain amino acid permease (brnQ) gene, complete cds Length = 1630 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Minus Query: 119 caatcaaagccaagataatca 139 ||||||||||||||||||||| Sbjct: 1087 caatcaaagccaagataatca 1067
>gb|AC146999.1| Human Herpesvirus 5 AD169-BAC isolate, complete sequence Length = 233739 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Plus Query: 199 aacagcagcagcaccaccacc 219 ||||||||||||||||||||| Sbjct: 106244 aacagcagcagcaccaccacc 106264
>gb|AC146907.1| Human Herpesvirus 5 FIX-BAC isolate, complete sequence Length = 229209 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Plus Query: 199 aacagcagcagcaccaccacc 219 ||||||||||||||||||||| Sbjct: 112525 aacagcagcagcaccaccacc 112545
>gb|AC146906.1| Human Herpesvirus 5 TR-BAC isolate, complete sequence Length = 234881 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Minus Query: 199 aacagcagcagcaccaccacc 219 ||||||||||||||||||||| Sbjct: 151395 aacagcagcagcaccaccacc 151375
>gb|AC146905.1| Human Herpesvirus 5 Toledo-BAC isolate, complete sequence Length = 226889 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Plus Query: 199 aacagcagcagcaccaccacc 219 ||||||||||||||||||||| Sbjct: 107930 aacagcagcagcaccaccacc 107950
>gb|AC146904.1| Human Herpesvirus 5 PH-BAC isolate, complete sequence Length = 229700 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Plus Query: 199 aacagcagcagcaccaccacc 219 ||||||||||||||||||||| Sbjct: 112609 aacagcagcagcaccaccacc 112629
>gb|AC146851.1| Human Herpesvirus 5 Towne-BAC isolate, complete sequence Length = 229483 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Minus Query: 199 aacagcagcagcaccaccacc 219 ||||||||||||||||||||| Sbjct: 148881 aacagcagcagcaccaccacc 148861
>gb|AY315197.1| Human herpesvirus 5 strain Towne, complete genome Length = 231236 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Minus Query: 199 aacagcagcagcaccaccacc 219 ||||||||||||||||||||| Sbjct: 113854 aacagcagcagcaccaccacc 113834
>gb|AC155929.6| Mus musculus BAC clone RP24-75H6 from chromosome 10, complete sequence Length = 191193 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Minus Query: 120 aatcaaagccaagataatcaa 140 ||||||||||||||||||||| Sbjct: 28417 aatcaaagccaagataatcaa 28397
>emb|BX048734.1|CNS099RM Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC24AC10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 330 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Plus Query: 200 acagcagcagcaccaccaccg 220 ||||||||||||||||||||| Sbjct: 51 acagcagcagcaccaccaccg 71
>emb|BX013177.1|CNS08IBX Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA2DD11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 985 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Plus Query: 200 acagcagcagcaccaccaccg 220 ||||||||||||||||||||| Sbjct: 78 acagcagcagcaccaccaccg 98
>emb|BX010093.1|CNS08FY9 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA16BA11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 956 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Plus Query: 200 acagcagcagcaccaccaccg 220 ||||||||||||||||||||| Sbjct: 66 acagcagcagcaccaccaccg 86
>emb|BX008642.1|CNS08ETY Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA14AF06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 805 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Plus Query: 200 acagcagcagcaccaccaccg 220 ||||||||||||||||||||| Sbjct: 66 acagcagcagcaccaccaccg 86
>emb|BX008207.1|CNS08EHV Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA13CC08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 988 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Plus Query: 200 acagcagcagcaccaccaccg 220 ||||||||||||||||||||| Sbjct: 75 acagcagcagcaccaccaccg 95
>emb|X56682.1|DAOM1D D. ananassae Om(1D) gene Length = 6726 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Plus Query: 199 aacagcagcagcaccaccacc 219 ||||||||||||||||||||| Sbjct: 2007 aacagcagcagcaccaccacc 2027
>emb|X17403.1|HEHCMVCG Human cytomegalovirus strain AD169 complete genome Length = 229354 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Minus Query: 199 aacagcagcagcaccaccacc 219 ||||||||||||||||||||| Sbjct: 114404 aacagcagcagcaccaccacc 114384
>emb|BX842633.1| Neurospora crassa DNA linkage group I cosmid contig 53H1 Length = 74723 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Minus Query: 199 aacagcagcagcaccaccacc 219 ||||||||||||||||||||| Sbjct: 37355 aacagcagcagcaccaccacc 37335
>gb|AC010058.7| Drosophila melanogaster 3L BAC RP98-26L14 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 181950 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Minus Query: 199 aacagcagcagcaccaccacc 219 ||||||||||||||||||||| Sbjct: 161182 aacagcagcagcaccaccacc 161162
>gb|AY051828.1| Drosophila melanogaster LD33361 full insert cDNA Length = 3589 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Plus Query: 199 aacagcagcagcaccaccacc 219 ||||||||||||||||||||| Sbjct: 851 aacagcagcagcaccaccacc 871
>ref|NM_168421.1| Drosophila melanogaster simjang CG32067-RB, transcript variant B (simj), mRNA Length = 3448 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Plus Query: 199 aacagcagcagcaccaccacc 219 ||||||||||||||||||||| Sbjct: 641 aacagcagcagcaccaccacc 661
>ref|NM_168420.1| Drosophila melanogaster simjang CG32067-RA, transcript variant A (simj), mRNA Length = 3689 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Plus Query: 199 aacagcagcagcaccaccacc 219 ||||||||||||||||||||| Sbjct: 882 aacagcagcagcaccaccacc 902
>ref|NM_165242.1| Drosophila melanogaster kelch CG7210-RA, transcript variant A (kel), mRNA Length = 6157 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Plus Query: 199 aacagcagcagcaccaccacc 219 ||||||||||||||||||||| Sbjct: 518 aacagcagcagcaccaccacc 538
>ref|NM_140150.2| Drosophila melanogaster simjang CG32067-RC, transcript variant C (simj), mRNA Length = 3677 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Plus Query: 199 aacagcagcagcaccaccacc 219 ||||||||||||||||||||| Sbjct: 882 aacagcagcagcaccaccacc 902
>ref|NM_057241.2| Drosophila melanogaster kelch CG7210-RB, transcript variant B (kel), mRNA Length = 6157 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Plus Query: 199 aacagcagcagcaccaccacc 219 ||||||||||||||||||||| Sbjct: 518 aacagcagcagcaccaccacc 538
>gb|AC153141.7| Mus musculus BAC clone RP23-268A17 from chromosome 10, complete sequence Length = 221824 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Minus Query: 120 aatcaaagccaagataatcaa 140 ||||||||||||||||||||| Sbjct: 160265 aatcaaagccaagataatcaa 160245
>gb|AC093048.1| Drosophila melanogaster, chromosome 2L, region 36D-36E, BAC clone BACR39D12, complete sequence Length = 184021 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Minus Query: 199 aacagcagcagcaccaccacc 219 ||||||||||||||||||||| Sbjct: 75325 aacagcagcagcaccaccacc 75305
>gb|BT003250.1| Drosophila melanogaster LD29455 full insert cDNA Length = 5446 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Plus Query: 199 aacagcagcagcaccaccacc 219 ||||||||||||||||||||| Sbjct: 342 aacagcagcagcaccaccacc 362
>gb|AC154502.2| Mus musculus BAC clone RP24-87I20 from chromosome 13, complete sequence Length = 183319 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Minus Query: 199 aacagcagcagcaccaccacc 219 ||||||||||||||||||||| Sbjct: 8505 aacagcagcagcaccaccacc 8485
>emb|AJ507101.1|HVU507101 Hordeum vulgare partial mRNA for NBS-LRR disease resistance protein homologue (rga S-T21 gene) Length = 4711 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Minus Query: 199 aacagcagcagcaccaccacc 219 ||||||||||||||||||||| Sbjct: 552 aacagcagcagcaccaccacc 532
>gb|L08483.1|DRORCPA Drosophila melanogaster ring canal proteins (kel) mRNA, complete cds Length = 5619 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Plus Query: 199 aacagcagcagcaccaccacc 219 ||||||||||||||||||||| Sbjct: 517 aacagcagcagcaccaccacc 537
>gb|AE003657.3| Drosophila melanogaster chromosome 2L, section 66 of 83 of the complete sequence Length = 265254 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Minus Query: 199 aacagcagcagcaccaccacc 219 ||||||||||||||||||||| Sbjct: 248437 aacagcagcagcaccaccacc 248417
>gb|AE003547.3| Drosophila melanogaster chromosome 3L, section 38 of 83 of the complete sequence Length = 281339 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Plus Query: 199 aacagcagcagcaccaccacc 219 ||||||||||||||||||||| Sbjct: 78403 aacagcagcagcaccaccacc 78423
>gb|AC006471.1|AC006471 Drosophila melanogaster, chromosome 2L, region 36D2-36E2, P1 clones DS00554 and DS04489, complete sequence Length = 134019 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Plus Query: 199 aacagcagcagcaccaccacc 219 ||||||||||||||||||||| Sbjct: 127225 aacagcagcagcaccaccacc 127245
>emb|AL831741.16| Mouse DNA sequence from clone RP23-337N2 on chromosome 4, complete sequence Length = 213347 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Minus Query: 199 aacagcagcagcaccaccacc 219 ||||||||||||||||||||| Sbjct: 197703 aacagcagcagcaccaccacc 197683
>gb|AC127247.3| Mus musculus BAC clone RP24-435G16 from 3, complete sequence Length = 181566 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Plus Query: 199 aacagcagcagcaccaccacc 219 ||||||||||||||||||||| Sbjct: 133570 aacagcagcagcaccaccacc 133590
>gb|M59962.1|DROBARH1A1 Drosophila ananassae homeobox protein (BarH1) gene, exon 1 Length = 926 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Plus Query: 199 aacagcagcagcaccaccacc 219 ||||||||||||||||||||| Sbjct: 320 aacagcagcagcaccaccacc 340
>ref|NM_186617.2| Oryza sativa (japonica cultivar-group), mRNA Length = 2691 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 cagcagcagcaccaccaccg 220 |||||||||||||||||||| Sbjct: 960 cagcagcagcaccaccaccg 941
>ref|XM_718079.1| Candida albicans SC5314 putative proteasome-interacting protein (CaO19_5961), mRNA Length = 750 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 aacagcagcagcaccaccac 218 |||||||||||||||||||| Sbjct: 310 aacagcagcagcaccaccac 329
>ref|XM_717932.1| Candida albicans SC5314 putative proteasome-interacting protein (CaO19_13382), mRNA Length = 750 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 aacagcagcagcaccaccac 218 |||||||||||||||||||| Sbjct: 310 aacagcagcagcaccaccac 329
>ref|XM_708865.1| Candida albicans SC5314 hypothetical protein (CaO19.9831), mRNA Length = 3927 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 cagcagcagcaccaccaccg 220 |||||||||||||||||||| Sbjct: 694 cagcagcagcaccaccaccg 675
>ref|XM_708808.1| Candida albicans SC5314 hypothetical protein (CaO19.2296), mRNA Length = 3927 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 cagcagcagcaccaccaccg 220 |||||||||||||||||||| Sbjct: 694 cagcagcagcaccaccaccg 675
>gb|AC127433.1| Mus musculus BAC clone RP23-151I7 from 1, complete sequence Length = 228489 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 acagcagcagcaccaccacc 219 |||||||||||||||||||| Sbjct: 81166 acagcagcagcaccaccacc 81185 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 acagcagcagcaccaccacc 219 |||||||||||||||||||| Sbjct: 81038 acagcagcagcaccaccacc 81057 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 acagcagcagcaccaccacc 219 |||||||||||||||||||| Sbjct: 81006 acagcagcagcaccaccacc 81025 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 acagcagcagcaccaccacc 219 |||||||||||||||||||| Sbjct: 80942 acagcagcagcaccaccacc 80961 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 acagcagcagcaccaccacc 219 |||||||||||||||||||| Sbjct: 80910 acagcagcagcaccaccacc 80929 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 acagcagcagcaccaccacc 219 |||||||||||||||||||| Sbjct: 80846 acagcagcagcaccaccacc 80865
>emb|BX049326.1|CNS09A82 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC25AH01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 854 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 cagcagcagcaccaccaccg 220 |||||||||||||||||||| Sbjct: 106 cagcagcagcaccaccaccg 125
>emb|BX033989.1|CNS08YE1 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA5CG12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 747 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 cagcagcagcaccaccaccg 220 |||||||||||||||||||| Sbjct: 94 cagcagcagcaccaccaccg 113
>gb|AC010030.10| Drosophila melanogaster 3L BAC RP98-2C14 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 200859 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 acagcagcagcaccaccacc 219 |||||||||||||||||||| Sbjct: 127713 acagcagcagcaccaccacc 127732
>gb|AC010069.9| Drosophila melanogaster 3L BAC RP98-17C18 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 166352 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 acagcagcagcaccaccacc 219 |||||||||||||||||||| Sbjct: 30656 acagcagcagcaccaccacc 30637
>gb|AC091226.3| Drosophila melanogaster 3L BAC RP98-3I13 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 165518 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 aaaatccacttacaagcttt 108 |||||||||||||||||||| Sbjct: 60983 aaaatccacttacaagcttt 61002
>tpg|BK002065.1| TPA: TPA_inf: Drosophila melanogaster HDC09511 (HDC09511) gene, partial cds Length = 645 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 acagcagcagcaccaccacc 219 |||||||||||||||||||| Sbjct: 12 acagcagcagcaccaccacc 31
>gb|AY113653.1| Drosophila melanogaster SD18087 full insert cDNA Length = 2246 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 cagcagcagcaccaccaccg 220 |||||||||||||||||||| Sbjct: 1163 cagcagcagcaccaccaccg 1182
>ref|NM_170366.1| Drosophila melanogaster La related protein CG14066-RB, transcript variant B (larp), mRNA Length = 6749 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 cagcagcagcaccaccaccg 220 |||||||||||||||||||| Sbjct: 1167 cagcagcagcaccaccaccg 1186
>ref|NM_170365.1| Drosophila melanogaster La related protein CG14066-RC, transcript variant C (larp), mRNA Length = 6749 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 cagcagcagcaccaccaccg 220 |||||||||||||||||||| Sbjct: 1167 cagcagcagcaccaccaccg 1186
>ref|NM_080259.1| Drosophila melanogaster La related protein CG14066-RA, transcript variant A (larp), mRNA Length = 6733 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 cagcagcagcaccaccaccg 220 |||||||||||||||||||| Sbjct: 1151 cagcagcagcaccaccaccg 1170
>ref|NM_001038911.1| Drosophila melanogaster CG34050-RA (CG34050), mRNA Length = 588 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 acagcagcagcaccaccacc 219 |||||||||||||||||||| Sbjct: 12 acagcagcagcaccaccacc 31
>gb|AC091940.3| Homo sapiens chromosome 5 clone RP11-331K21, complete sequence Length = 143702 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 cagcagcagcaccaccaccg 220 |||||||||||||||||||| Sbjct: 143585 cagcagcagcaccaccaccg 143604
>gb|AC012613.7| Homo sapiens chromosome 5 clone CTB-162I23, complete sequence Length = 164550 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 cagcagcagcaccaccaccg 220 |||||||||||||||||||| Sbjct: 162188 cagcagcagcaccaccaccg 162169
>gb|AC158529.2| Mus musculus BAC clone RP23-263H3 from chromosome 13, complete sequence Length = 172769 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 cagcagcagcaccaccaccg 220 |||||||||||||||||||| Sbjct: 171393 cagcagcagcaccaccaccg 171374
>tpg|BK001744.1| TPA: TPA_exp: Suid herpesvirus 1, complete genome Length = 143461 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 cagcagcagcaccaccaccg 220 |||||||||||||||||||| Sbjct: 92868 cagcagcagcaccaccaccg 92849
>gb|AY751552.1| Sorghum bicolor pathogenesis-related protein 10c (PR10) gene, complete cds Length = 1098 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 attacatactacttgtatat 53 |||||||||||||||||||| Sbjct: 84 attacatactacttgtatat 103
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 cagcagcagcaccaccaccg 220 |||||||||||||||||||| Sbjct: 6784990 cagcagcagcaccaccaccg 6785009
>gb|AC009345.7|AC009345 Drosophila melanogaster, chromosome 3R, region 98C-98C, BAC clone BACR28F20, complete sequence Length = 158895 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 cagcagcagcaccaccaccg 220 |||||||||||||||||||| Sbjct: 115140 cagcagcagcaccaccaccg 115121
>gb|AC009460.4|AC009460 Drosophila melanogaster, chromosome 2R, region 60B-60C, BAC clone BACR04P18, complete sequence Length = 159455 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 acagcagcagcaccaccacc 219 |||||||||||||||||||| Sbjct: 108851 acagcagcagcaccaccacc 108870
>gb|AC008028.3|AC008028 Drosophila melanogaster, chromosome 3R, region 98C-98D, BAC clone BACR14L13, complete sequence Length = 197348 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 cagcagcagcaccaccaccg 220 |||||||||||||||||||| Sbjct: 18355 cagcagcagcaccaccaccg 18336
>gb|AC155828.8| Mus musculus 10 BAC RP24-105O7 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 128973 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 acagcagcagcaccaccacc 219 |||||||||||||||||||| Sbjct: 51557 acagcagcagcaccaccacc 51538
>dbj|AP005197.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0592C06 Length = 160071 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 cagcagcagcaccaccaccg 220 |||||||||||||||||||| Sbjct: 79124 cagcagcagcaccaccaccg 79143
>gb|AF221108.1|AF221108 Drosophila melanogaster La related protein (larp) mRNA, partial cds Length = 6739 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 cagcagcagcaccaccaccg 220 |||||||||||||||||||| Sbjct: 1162 cagcagcagcaccaccaccg 1181
>dbj|AK107502.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-E02, full insert sequence Length = 2691 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 cagcagcagcaccaccaccg 220 |||||||||||||||||||| Sbjct: 960 cagcagcagcaccaccaccg 941
>gb|AE003764.3| Drosophila melanogaster chromosome 3R, section 102 of 118 of the complete sequence Length = 231455 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 cagcagcagcaccaccaccg 220 |||||||||||||||||||| Sbjct: 225429 cagcagcagcaccaccaccg 225410
>gb|AE003546.4| Drosophila melanogaster chromosome 3L, section 39 of 83 of the complete sequence Length = 281589 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 acagcagcagcaccaccacc 219 |||||||||||||||||||| Sbjct: 56327 acagcagcagcaccaccacc 56346
>gb|AE003537.3| Drosophila melanogaster chromosome 3L, section 48 of 83 of the complete sequence Length = 282116 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 aaaatccacttacaagcttt 108 |||||||||||||||||||| Sbjct: 124806 aaaatccacttacaagcttt 124825
>gb|AE003524.5| Drosophila melanogaster chromosome 3L, section 61 of 83 of the complete sequence Length = 425677 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 acagcagcagcaccaccacc 219 |||||||||||||||||||| Sbjct: 95775 acagcagcagcaccaccacc 95794
>gb|AE003463.2| Drosophila melanogaster chromosome 2R, section 70 of 73 of the complete sequence Length = 298827 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 acagcagcagcaccaccacc 219 |||||||||||||||||||| Sbjct: 208252 acagcagcagcaccaccacc 208271
>emb|CT030195.12| Mouse DNA sequence from clone RP23-191J8 on chromosome 13, complete sequence Length = 219800 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 cagcagcagcaccaccaccg 220 |||||||||||||||||||| Sbjct: 122965 cagcagcagcaccaccaccg 122946
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 cagcagcagcaccaccaccg 220 |||||||||||||||||||| Sbjct: 3130713 cagcagcagcaccaccaccg 3130694
>emb|AJ580965.1|SHE580965 Suid herpesvirus 1 strain Kaplan UL5 gene, UL4 gene, UL6 gene (partial), UL3.5 gene, UL3 gene and UL2 gene (partial) Length = 5200 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 cagcagcagcaccaccaccg 220 |||||||||||||||||||| Sbjct: 3949 cagcagcagcaccaccaccg 3930
>gb|AC167927.2| Mycosphaerella graminicola clone JGIBBWB-9H22, complete sequence Length = 41182 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 acagcagcagcaccaccacc 219 |||||||||||||||||||| Sbjct: 21981 acagcagcagcaccaccacc 21962
>emb|AL929132.9| Mouse DNA sequence from clone RP23-346G8 on chromosome 2, complete sequence Length = 129438 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 acagcagcagcaccaccacc 219 |||||||||||||||||||| Sbjct: 55400 acagcagcagcaccaccacc 55419 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,811,622 Number of Sequences: 3902068 Number of extensions: 2811622 Number of successful extensions: 249444 Number of sequences better than 10.0: 89 Number of HSP's better than 10.0 without gapping: 89 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 248709 Number of HSP's gapped (non-prelim): 734 length of query: 225 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 203 effective length of database: 17,147,199,772 effective search space: 3480881553716 effective search space used: 3480881553716 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)