ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd26j17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 244 3e-61
2dbj|AP005409.4| Oryza sativa (japonica cultivar-group) genomic D... 244 3e-61
3dbj|AK105193.1| Oryza sativa (japonica cultivar-group) cDNA clon... 244 3e-61
4gb|AY105159.1| Zea mays PCO075778 mRNA sequence 230 4e-57
5gb|BT017394.1| Zea mays clone EL01N0327H09.c mRNA sequence 228 2e-56
6dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 135 2e-28
7dbj|AP003333.4| Oryza sativa (japonica cultivar-group) genomic D... 135 2e-28
8dbj|AP003253.3| Oryza sativa (japonica cultivar-group) genomic D... 135 2e-28
9gb|AC112676.8| Mus musculus chromosome 9, clone RP23-174F7, comp... 46 0.13
10dbj|AP002833.3| Homo sapiens genomic DNA, chromosome 11q, clone:... 42 2.0
11gb|BC068332.1| Danio rerio zgc:85626, mRNA (cDNA clone MGC:85626... 40 7.8
12ref|XM_656096.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 7.8
13gb|AC184077.2| Populus trichocarpa clone Pop1-53L15, complete se... 40 7.8
14emb|AL772148.6| Zebrafish DNA sequence from clone CH211-153C20 i... 40 7.8
15emb|BX897741.9| Zebrafish DNA sequence from clone DKEY-273O13 in... 40 7.8
16gb|AC104450.2| Homo sapiens chromosome 3 clone RP11-493K19, comp... 40 7.8
17gb|AF291662.1| Aspergillus nidulans Kex2-like dibasic endoprotea... 40 7.8
18ref|XM_681635.1| PREDICTED: Danio rerio similar to 2,4-dienoyl C... 40 7.8
19ref|XM_703423.1| PREDICTED: Danio rerio similar to 2,4-dienoyl C... 40 7.8
20ref|XM_681286.1| PREDICTED: Danio rerio similar to 2,4-dienoyl C... 40 7.8
21ref|XM_703300.1| PREDICTED: Danio rerio similar to 2,4-dienoyl C... 40 7.8
22ref|NM_213321.1| Danio rerio zgc:85626 (zgc:85626), mRNA 40 7.8
23gb|AC009490.10| Homo sapiens BAC clone RP11-355A23 from 2, compl... 40 7.8
24emb|BX322785.6| Zebrafish DNA sequence from clone DKEYP-78B1 in ... 40 7.8
25gb|AC151747.3| Ornithorhynchus anatinus chromosome UNK clone OAB... 40 7.8
26gb|AC004814.2|AC004814 Homo sapiens clone 3938P1, complete sequence 40 7.8
27emb|AL954147.12| Zebrafish DNA sequence from clone CH211-117H23 ... 40 7.8 
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  244 bits (123), Expect = 3e-61
 Identities = 291/347 (83%)
 Strand = Plus / Minus

                                                                           
Query: 231     ttgagaaatcttgccgggctgaagggcgcaagatcaacgatcttggcctgcccatcgagg 290
               |||||||| ||||| |||||||| ||||| ||||| ||||||||||| |  || ||||||
Sbjct: 2978646 ttgagaaaccttgctgggctgaacggcgcgagatcgacgatcttggcatcgccgtcgagg 2978587

                                                                           
Query: 291     atgagctcggcgagtgctgcaccggtaactggagcattgaggatcccccagcagctgtgc 350
               |||||||| ||||| || ||||||||  ||||||||||||||||||||||||||||||||
Sbjct: 2978586 atgagctctgcgagagcggcaccggtggctggagcattgaggatcccccagcagctgtgc 2978527

                                                                           
Query: 351     ccggttgcaacgtagcatcccttcaccccgggcatttccccaatgaccggcagcccgtca 410
               ||||| || || ||||| |||||||| || ||||| ||||| || |||||||  ||||||
Sbjct: 2978526 ccggtggcgacatagcaacccttcactccaggcatctccccgatcaccggcaaaccgtca 2978467

                                                                           
Query: 411     tcggtgcacgggaggtagcaggcctgttccgcgactacctctgcgccctcctctgtcttg 470
               ||||||||||| |||||||| ||||| ||||| || ||||| ||||| |||||  |||| 
Sbjct: 2978466 tcggtgcacggcaggtagcaagcctgctccgccaccacctccgcgccttcctccctcttc 2978407

                                                                           
Query: 471     agctggctggacaccctcccagcaatcttatgaagcattgcaatggagtcaggctccccg 530
               ||||||| ||| |||||||| || ||||| || ||||| ||||| ||||| ||||| |||
Sbjct: 2978406 agctggccggaaaccctcccggcgatcttgtgcagcatcgcaattgagtccggctcaccg 2978347

                                                              
Query: 531     gcaatcgttgccggatcatctggaacttgctcgtccttgctcattcc 577
               |  |||||  |||| ||||| || || | ||| |||||| |||||||
Sbjct: 2978346 gtgatcgtctccgggtcatcgggcacctcctcatccttggtcattcc 2978300
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>dbj|AP005409.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0024L18
          Length = 150128

 Score =  244 bits (123), Expect = 3e-61
 Identities = 291/347 (83%)
 Strand = Plus / Minus

                                                                         
Query: 231   ttgagaaatcttgccgggctgaagggcgcaagatcaacgatcttggcctgcccatcgagg 290
             |||||||| ||||| |||||||| ||||| ||||| ||||||||||| |  || ||||||
Sbjct: 24701 ttgagaaaccttgctgggctgaacggcgcgagatcgacgatcttggcatcgccgtcgagg 24642

                                                                         
Query: 291   atgagctcggcgagtgctgcaccggtaactggagcattgaggatcccccagcagctgtgc 350
             |||||||| ||||| || ||||||||  ||||||||||||||||||||||||||||||||
Sbjct: 24641 atgagctctgcgagagcggcaccggtggctggagcattgaggatcccccagcagctgtgc 24582

                                                                         
Query: 351   ccggttgcaacgtagcatcccttcaccccgggcatttccccaatgaccggcagcccgtca 410
             ||||| || || ||||| |||||||| || ||||| ||||| || |||||||  ||||||
Sbjct: 24581 ccggtggcgacatagcaacccttcactccaggcatctccccgatcaccggcaaaccgtca 24522

                                                                         
Query: 411   tcggtgcacgggaggtagcaggcctgttccgcgactacctctgcgccctcctctgtcttg 470
             ||||||||||| |||||||| ||||| ||||| || ||||| ||||| |||||  |||| 
Sbjct: 24521 tcggtgcacggcaggtagcaagcctgctccgccaccacctccgcgccttcctccctcttc 24462

                                                                         
Query: 471   agctggctggacaccctcccagcaatcttatgaagcattgcaatggagtcaggctccccg 530
             ||||||| ||| |||||||| || ||||| || ||||| ||||| ||||| ||||| |||
Sbjct: 24461 agctggccggaaaccctcccggcgatcttgtgcagcatcgcaattgagtccggctcaccg 24402

                                                            
Query: 531   gcaatcgttgccggatcatctggaacttgctcgtccttgctcattcc 577
             |  |||||  |||| ||||| || || | ||| |||||| |||||||
Sbjct: 24401 gtgatcgtctccgggtcatcgggcacctcctcatccttggtcattcc 24355
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>dbj|AK105193.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-107-D11, full
            insert sequence
          Length = 1364

 Score =  244 bits (123), Expect = 3e-61
 Identities = 291/347 (83%)
 Strand = Plus / Minus

                                                                        
Query: 231  ttgagaaatcttgccgggctgaagggcgcaagatcaacgatcttggcctgcccatcgagg 290
            |||||||| ||||| |||||||| ||||| ||||| ||||||||||| |  || ||||||
Sbjct: 1175 ttgagaaaccttgctgggctgaacggcgcgagatcgacgatcttggcatcgccgtcgagg 1116

                                                                        
Query: 291  atgagctcggcgagtgctgcaccggtaactggagcattgaggatcccccagcagctgtgc 350
            |||||||| ||||| || ||||||||  ||||||||||||||||||||||||||||||||
Sbjct: 1115 atgagctctgcgagagcggcaccggtggctggagcattgaggatcccccagcagctgtgc 1056

                                                                        
Query: 351  ccggttgcaacgtagcatcccttcaccccgggcatttccccaatgaccggcagcccgtca 410
            ||||| || || ||||| |||||||| || ||||| ||||| || |||||||  ||||||
Sbjct: 1055 ccggtggcgacatagcaacccttcactccaggcatctccccgatcaccggcaaaccgtca 996

                                                                        
Query: 411  tcggtgcacgggaggtagcaggcctgttccgcgactacctctgcgccctcctctgtcttg 470
            ||||||||||| |||||||| ||||| ||||| || ||||| ||||| |||||  |||| 
Sbjct: 995  tcggtgcacggcaggtagcaagcctgctccgccaccacctccgcgccttcctccctcttc 936

                                                                        
Query: 471  agctggctggacaccctcccagcaatcttatgaagcattgcaatggagtcaggctccccg 530
            ||||||| ||| |||||||| || ||||| || ||||| ||||| ||||| ||||| |||
Sbjct: 935  agctggccggaaaccctcccggcgatcttgtgcagcatcgcaattgagtccggctcaccg 876

                                                           
Query: 531  gcaatcgttgccggatcatctggaacttgctcgtccttgctcattcc 577
            |  |||||  |||| ||||| || || | ||| |||||| |||||||
Sbjct: 875  gtgatcgtctccgggtcatcgggcacctcctcatccttggtcattcc 829
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>gb|AY105159.1| Zea mays PCO075778 mRNA sequence
          Length = 604

 Score =  230 bits (116), Expect = 4e-57
 Identities = 287/344 (83%)
 Strand = Plus / Plus

                                                                       
Query: 231 ttgagaaatcttgccgggctgaagggcgcaagatcaacgatcttggcctgcccatcgagg 290
           |||||||| |||||||||||||| ||| | |||||||||||||||| ||  || || |||
Sbjct: 182 ttgagaaaccttgccgggctgaaaggctcgagatcaacgatcttggacttgccgtccagg 241

                                                                       
Query: 291 atgagctcggcgagtgctgcaccggtaactggagcattgaggatcccccagcagctgtgc 350
           |||||||||||||| ||||| |||||  | ||| |||||||||| |||||||||||||| 
Sbjct: 242 atgagctcggcgagggctgcgccggtggccggaccattgaggataccccagcagctgtgg 301

                                                                       
Query: 351 ccggttgcaacgtagcatcccttcaccccgggcatttccccaatgaccggcagcccgtca 410
           || || || || ||||| || ||||| || || || ||||| ||||||||||||||||| 
Sbjct: 302 cccgtggccacatagcaccctttcacgcctggtatctccccgatgaccggcagcccgtcg 361

                                                                       
Query: 411 tcggtgcacgggaggtagcaggcctgttccgcgactacctctgcgccctcctctgtcttg 470
            |||||||||| |||||||| ||||| |||||||| ||||| |||||||||||  |||| 
Sbjct: 362 gcggtgcacggcaggtagcacgcctgctccgcgaccacctcagcgccctcctccttcttc 421

                                                                       
Query: 471 agctggctggacaccctcccagcaatcttatgaagcattgcaatggagtcaggctccccg 530
           ||||||||||||||  | || || |||||||| ||||||||||| ||||| ||||| || 
Sbjct: 422 agctggctggacactttgcctgcgatcttatgcagcattgcaatcgagtctggctcgcct 481

                                                       
Query: 531 gcaatcgttgccggatcatctggaacttgctcgtccttgctcat 574
            | |||||||| || ||||||||    | |||||||||||||||
Sbjct: 482 actatcgttgctgggtcatctggcgggttctcgtccttgctcat 525
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>gb|BT017394.1| Zea mays clone EL01N0327H09.c mRNA sequence
          Length = 711

 Score =  228 bits (115), Expect = 2e-56
 Identities = 271/323 (83%)
 Strand = Plus / Minus

                                                                       
Query: 231 ttgagaaatcttgccgggctgaagggcgcaagatcaacgatcttggcctgcccatcgagg 290
           |||||||| |||||||||||||| ||| | |||||||||||||||| ||  || || |||
Sbjct: 652 ttgagaaaccttgccgggctgaaaggctcgagatcaacgatcttggacttgccgtccagg 593

                                                                       
Query: 291 atgagctcggcgagtgctgcaccggtaactggagcattgaggatcccccagcagctgtgc 350
           |||||||||||||| ||||| |||||  | ||| |||||||||| |||||||||||||| 
Sbjct: 592 atgagctcggcgagggctgcgccggtggccggaccattgaggataccccagcagctgtgg 533

                                                                       
Query: 351 ccggttgcaacgtagcatcccttcaccccgggcatttccccaatgaccggcagcccgtca 410
           || || || || ||||| || ||||| || || || ||||| ||||||||||||||||| 
Sbjct: 532 cccgtggccacatagcaccctttcacgcctggtatctccccgatgaccggcagcccgtcg 473

                                                                       
Query: 411 tcggtgcacgggaggtagcaggcctgttccgcgactacctctgcgccctcctctgtcttg 470
            |||||||||| |||||||| ||||| |||||||| ||||| |||||||||||  |||| 
Sbjct: 472 gcggtgcacggcaggtagcacgcctgctccgcgaccacctcagcgccctcctccttcttc 413

                                                                       
Query: 471 agctggctggacaccctcccagcaatcttatgaagcattgcaatggagtcaggctccccg 530
           ||||||||||||||  | || || |||||||| ||||||||||| ||||| ||||| || 
Sbjct: 412 agctggctggacactttgcctgcgatcttatgcagcattgcaatcgagtctggctcgcct 353

                                  
Query: 531 gcaatcgttgccggatcatctgg 553
            | |||||||| || ||||||||
Sbjct: 352 actatcgttgctgggtcatctgg 330
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  135 bits (68), Expect = 2e-28
 Identities = 170/204 (83%)
 Strand = Plus / Plus

                                                                            
Query: 287      gaggatgagctcggcgagtgctgcaccggtaactggagcattgaggatcccccagcagct 346
                |||||||||||| ||||| || || |||||  | ||||| |||||||| ||||| | || 
Sbjct: 23298054 gaggatgagctccgcgagcgcagcgccggtggccggagcgttgaggattccccacccgcc 23298113

                                                                            
Query: 347      gtgcccggttgcaacgtagcatcccttcaccccgggcatttccccaatgaccggcagccc 406
                ||||||||| || |||||||| ||||||||||| ||||| || || || ||||||| |||
Sbjct: 23298114 gtgcccggtggcgacgtagcaacccttcaccccaggcatctctccgatcaccggcaaccc 23298173

                                                                            
Query: 407      gtcatcggtgcacgggaggtagcaggcctgttccgcgactacctctgcgccctcctctgt 466
                ||||  ||||||||| | |||||| ||||| ||||| || ||||| ||||| |||||  |
Sbjct: 23298174 gtcactggtgcacggcatgtagcaagcctgctccgccaccacctccgcgccttcctccct 23298233

                                        
Query: 467      cttgagctggctggacaccctccc 490
                ||| ||||||||||||||||||||
Sbjct: 23298234 cttcagctggctggacaccctccc 23298257
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>dbj|AP003333.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1103C09
          Length = 163996

 Score =  135 bits (68), Expect = 2e-28
 Identities = 170/204 (83%)
 Strand = Plus / Plus

                                                                         
Query: 287   gaggatgagctcggcgagtgctgcaccggtaactggagcattgaggatcccccagcagct 346
             |||||||||||| ||||| || || |||||  | ||||| |||||||| ||||| | || 
Sbjct: 23752 gaggatgagctccgcgagcgcagcgccggtggccggagcgttgaggattccccacccgcc 23811

                                                                         
Query: 347   gtgcccggttgcaacgtagcatcccttcaccccgggcatttccccaatgaccggcagccc 406
             ||||||||| || |||||||| ||||||||||| ||||| || || || ||||||| |||
Sbjct: 23812 gtgcccggtggcgacgtagcaacccttcaccccaggcatctctccgatcaccggcaaccc 23871

                                                                         
Query: 407   gtcatcggtgcacgggaggtagcaggcctgttccgcgactacctctgcgccctcctctgt 466
             ||||  ||||||||| | |||||| ||||| ||||| || ||||| ||||| |||||  |
Sbjct: 23872 gtcactggtgcacggcatgtagcaagcctgctccgccaccacctccgcgccttcctccct 23931

                                     
Query: 467   cttgagctggctggacaccctccc 490
             ||| ||||||||||||||||||||
Sbjct: 23932 cttcagctggctggacaccctccc 23955
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>dbj|AP003253.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0451D05
          Length = 148381

 Score =  135 bits (68), Expect = 2e-28
 Identities = 170/204 (83%)
 Strand = Plus / Plus

                                                                         
Query: 287   gaggatgagctcggcgagtgctgcaccggtaactggagcattgaggatcccccagcagct 346
             |||||||||||| ||||| || || |||||  | ||||| |||||||| ||||| | || 
Sbjct: 84796 gaggatgagctccgcgagcgcagcgccggtggccggagcgttgaggattccccacccgcc 84855

                                                                         
Query: 347   gtgcccggttgcaacgtagcatcccttcaccccgggcatttccccaatgaccggcagccc 406
             ||||||||| || |||||||| ||||||||||| ||||| || || || ||||||| |||
Sbjct: 84856 gtgcccggtggcgacgtagcaacccttcaccccaggcatctctccgatcaccggcaaccc 84915

                                                                         
Query: 407   gtcatcggtgcacgggaggtagcaggcctgttccgcgactacctctgcgccctcctctgt 466
             ||||  ||||||||| | |||||| ||||| ||||| || ||||| ||||| |||||  |
Sbjct: 84916 gtcactggtgcacggcatgtagcaagcctgctccgccaccacctccgcgccttcctccct 84975

                                     
Query: 467   cttgagctggctggacaccctccc 490
             ||| ||||||||||||||||||||
Sbjct: 84976 cttcagctggctggacaccctccc 84999
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>gb|AC112676.8| Mus musculus chromosome 9, clone RP23-174F7, complete sequence
          Length = 230293

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 329    gaggatcccccagcagctgtgcc 351
              |||||||||||||||||||||||
Sbjct: 190376 gaggatcccccagcagctgtgcc 190398
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>dbj|AP002833.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-688I9, complete
              sequence
          Length = 175562

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 453    gcgccctcctctgtcttgagc 473
              |||||||||||||||||||||
Sbjct: 118037 gcgccctcctctgtcttgagc 118017
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>gb|BC068332.1| Danio rerio zgc:85626, mRNA (cDNA clone MGC:85626 IMAGE:6525318),
            complete cds
          Length = 1888

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 40   agtgttgaaggtttatttat 59
            ||||||||||||||||||||
Sbjct: 1565 agtgttgaaggtttatttat 1546
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>ref|XM_656096.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN3584.2), mRNA
          Length = 1464

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 287 gaggatgagctcggcgagtg 306
           ||||||||||||||||||||
Sbjct: 129 gaggatgagctcggcgagtg 148
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>gb|AC184077.2| Populus trichocarpa clone Pop1-53L15, complete sequence
          Length = 28233

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                     
Query: 336   ccccagcagctgtgcccggttgcaacgtagcatcccttcaccccgggcatttcccc 391
             ||||| ||| ||||||| || ||||| || || |||||||||||||| || |||||
Sbjct: 16855 ccccaacagttgtgcccagtggcaacataacaacccttcaccccgggaatctcccc 16800
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>emb|AL772148.6| Zebrafish DNA sequence from clone CH211-153C20 in linkage group 24
              Contains part of a novel gene similar to human DECR2
              (peroxisomal 2,4-dienoyl CoA reductase 2),  a novel gene
              similar to human KIAA0665, a novel gene similar to human
              KIAA0683, a novel gene similar to human KIAA0590, part of a
              novel gene and three CpG islands, complete sequence
          Length = 161218

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 40     agtgttgaaggtttatttat 59
              ||||||||||||||||||||
Sbjct: 153628 agtgttgaaggtttatttat 153647
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>emb|BX897741.9| Zebrafish DNA sequence from clone DKEY-273O13 in linkage group 5,
             complete sequence
          Length = 168673

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 220   tcttcttgttgttgagaaat 239
             ||||||||||||||||||||
Sbjct: 22893 tcttcttgttgttgagaaat 22874
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>gb|AC104450.2| Homo sapiens chromosome 3 clone RP11-493K19, complete sequence
          Length = 217337

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 469   tgagctggctggacaccctc 488
             ||||||||||||||||||||
Sbjct: 86896 tgagctggctggacaccctc 86915
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>gb|AF291662.1| Aspergillus nidulans Kex2-like dibasic endoprotease ANPC gene,
            complete cds
          Length = 4688

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 287  gaggatgagctcggcgagtg 306
            ||||||||||||||||||||
Sbjct: 3889 gaggatgagctcggcgagtg 3908
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>ref|XM_681635.1| PREDICTED: Danio rerio similar to 2,4-dienoyl CoA reductase 2,
            peroxisomal, transcript variant 1 (LOC573514), mRNA
          Length = 1848

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 40   agtgttgaaggtttatttat 59
            ||||||||||||||||||||
Sbjct: 1583 agtgttgaaggtttatttat 1564
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>ref|XM_703423.1| PREDICTED: Danio rerio similar to 2,4-dienoyl CoA reductase 2,
            peroxisomal, transcript variant 2 (LOC573514), mRNA
          Length = 1796

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 40   agtgttgaaggtttatttat 59
            ||||||||||||||||||||
Sbjct: 1531 agtgttgaaggtttatttat 1512
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>ref|XM_681286.1| PREDICTED: Danio rerio similar to 2,4-dienoyl CoA reductase 2,
            peroxisomal, transcript variant 1 (LOC573411), mRNA
          Length = 1846

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 40   agtgttgaaggtttatttat 59
            ||||||||||||||||||||
Sbjct: 1581 agtgttgaaggtttatttat 1562
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>ref|XM_703300.1| PREDICTED: Danio rerio similar to 2,4-dienoyl CoA reductase 2,
            peroxisomal, transcript variant 2 (LOC573411), mRNA
          Length = 1794

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 40   agtgttgaaggtttatttat 59
            ||||||||||||||||||||
Sbjct: 1529 agtgttgaaggtttatttat 1510
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>ref|NM_213321.1| Danio rerio zgc:85626 (zgc:85626), mRNA
          Length = 1888

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 40   agtgttgaaggtttatttat 59
            ||||||||||||||||||||
Sbjct: 1565 agtgttgaaggtttatttat 1546
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>gb|AC009490.10| Homo sapiens BAC clone RP11-355A23 from 2, complete sequence
          Length = 158692

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 222   ttcttgttgttgagaaatct 241
             ||||||||||||||||||||
Sbjct: 68733 ttcttgttgttgagaaatct 68714
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>emb|BX322785.6| Zebrafish DNA sequence from clone DKEYP-78B1 in linkage group 24,
             complete sequence
          Length = 176602

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 40    agtgttgaaggtttatttat 59
             ||||||||||||||||||||
Sbjct: 37735 agtgttgaaggtttatttat 37716
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>gb|AC151747.3| Ornithorhynchus anatinus chromosome UNK clone OABb-520P24, complete
            sequence
          Length = 142317

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 98   tacattatttgatttggtgtcccc 121
            ||||||||||||||| ||||||||
Sbjct: 3519 tacattatttgattttgtgtcccc 3496
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>gb|AC004814.2|AC004814 Homo sapiens clone 3938P1, complete sequence
          Length = 83030

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 469  tgagctggctggacaccctc 488
            ||||||||||||||||||||
Sbjct: 8137 tgagctggctggacaccctc 8156
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>emb|AL954147.12| Zebrafish DNA sequence from clone CH211-117H23 in linkage group 24,
              complete sequence
          Length = 188067

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 40     agtgttgaaggtttatttat 59
              ||||||||||||||||||||
Sbjct: 112391 agtgttgaaggtttatttat 112372


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,263,108
Number of Sequences: 3902068
Number of extensions: 4263108
Number of successful extensions: 71745
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71653
Number of HSP's gapped (non-prelim): 91
length of query: 577
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 554
effective length of database: 17,143,297,704
effective search space: 9497386928016
effective search space used: 9497386928016
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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