Clone Name | rbasd26j05 |
---|---|
Clone Library Name | barley_pub |
>gb|AF508969.1| Triticum aestivum translation initiation factor mRNA, complete cds Length = 742 Score = 391 bits (197), Expect = e-105 Identities = 284/308 (92%), Gaps = 10/308 (3%) Strand = Plus / Minus Query: 1 gtaacaagaccatctaacgatggtgctccttacaaagcttcaacacaacggtagtaagca 60 |||||||| |||||||| ||||||||||||||||||| ||||||||||||||| ||||| Sbjct: 695 gtaacaag-ccatctaaagatggtgctccttacaaagtttcaacacaacggtaacaagca 637 Query: 61 tatacgcacgcagagaggtgg-ctatgctagactttgtgtatactcagaaggcgcaagc- 118 || ||||| |||||||||| |||||||||| ||| |||||||||||| |||||||| Sbjct: 636 tacacgca---agagaggtggactatgctagattttctgtatactcagagcgcgcaagct 580 Query: 119 -gtggcgcctgctagcgctagcacacaactaaatatactgcaccaccaatatatattagc 177 || |||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 579 ggtaacgcctgctagcgctagcacacaactaaatatactgcaccaccaatatata---gc 523 Query: 178 tgctttgcatgcagactctgataaggagctggcagttgctcagaaaccatgaatcttgat 237 ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 522 tgctttgcatgtagactctgatatggagctggcagttgctcagaaaccatgaatcttgat 463 Query: 238 gtgttccttcttcacaatgcccgcctggacaaggaagtttgagacgttcttcctctgatc 297 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 462 gtgttccttcttcacaatgccggcctggacaaggaagtttgagacgttcttcctctgatc 403 Query: 298 accctgga 305 |||||||| Sbjct: 402 accctgga 395 Score = 232 bits (117), Expect = 8e-58 Identities = 123/125 (98%) Strand = Plus / Minus Query: 298 accctggacagtggtcaggctcttgcgaccattacgctgctggatgcgtacatgcacgta 357 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 288 accctggacagtggtcaggctcttgcgaccattacgctgctggatgcgtacatgaacgta 229 Query: 358 gtcctttgatccggcagctgcaccagcgtccccagcattcgcctcggcaaaggggtcaaa 417 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 228 gtcttttgatccggcagctgcaccagcgtccccagcattcgcctcggcaaaggggtcaaa 169 Query: 418 ggcag 422 ||||| Sbjct: 168 ggcag 164 Score = 127 bits (64), Expect = 4e-26 Identities = 64/64 (100%) Strand = Plus / Minus Query: 419 gcagcaaaactctttcttgaggtctttgaggatcttgctgtagctgaactccttcttcag 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 348 gcagcaaaactctttcttgaggtctttgaggatcttgctgtagctgaactccttcttcag 289 Query: 479 accc 482 |||| Sbjct: 288 accc 285
>emb|AJ249397.1|PPR249397 Phleum pratense mRNA for putative protein translation factor SUI (SUI1 gene), partial Length = 560 Score = 202 bits (102), Expect = 8e-49 Identities = 123/130 (94%) Strand = Plus / Minus Query: 176 gctgctttgcatgcagactctgataaggagctggcagttgctcagaaaccatgaatcttg 235 |||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||| Sbjct: 329 gctgatttgcatgcagactttgatatggagctggcagttgctcagaaaccatgaatcttg 270 Query: 236 atgtgttccttcttcacaatgcccgcctggacaaggaagtttgagacgttcttcctctga 295 ||||||||||| ||||||||||| |||||||| ||||| ||||||||||||||||||||| Sbjct: 269 atgtgttcctttttcacaatgccagcctggacgaggaaatttgagacgttcttcctctga 210 Query: 296 tcaccctgga 305 |||||||||| Sbjct: 209 tcaccctgga 200 Score = 127 bits (64), Expect = 4e-26 Identities = 85/92 (92%) Strand = Plus / Minus Query: 299 ccctggacagtggtcaggctcttgcgaccattacgctgctggatgcgtacatgcacgtag 358 ||||||||||| ||||| |||||||| |||||||||||||||||||||||||| |||||| Sbjct: 92 ccctggacagtagtcagactcttgcggccattacgctgctggatgcgtacatggacgtag 33 Query: 359 tcctttgatccggcagctgcaccagcgtcccc 390 || |||||||| || ||||||||||||||||| Sbjct: 32 tcttttgatcctgccgctgcaccagcgtcccc 1 Score = 93.7 bits (47), Expect = 5e-16 Identities = 56/59 (94%) Strand = Plus / Minus Query: 419 gcagcaaaactctttcttgaggtctttgaggatcttgctgtagctgaactccttcttca 477 ||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||| Sbjct: 153 gcagcaaaactctttcttgagatctttgaggatcttactgtagctgaattccttcttca 95 Score = 58.0 bits (29), Expect = 3e-05 Identities = 123/149 (82%), Gaps = 9/149 (6%) Strand = Plus / Minus Query: 11 catctaacgatggtgctccttacaaagcttcaacacaacggtagt-aagcatatacgcac 69 ||||||||||||||||| |||||| | ||||||||||||||| ||||||| ||| Sbjct: 488 catctaacgatggtgcttcttacag-gtttcaacacaacggtaaacaagcata----cac 434 Query: 70 gcagagaggtggctatgctagac--tttgtgtatactcagaaggcgcaagcgtggcgcct 127 |||||||||| |||||||||| | |||||||| ||||| || | |||||||| |||| Sbjct: 433 gcagagaggtcgctatgctaggctttttgtgtaaactca-aacgtgcaagcgtaatgcct 375 Query: 128 gctagcgctagcacacaactaaatatact 156 |||| ||||||||||||| |||||||| Sbjct: 374 gctattgctagcacacaaccgaatatact 346
>ref|XM_478516.1| Oryza sativa (japonica cultivar-group), mRNA Length = 348 Score = 159 bits (80), Expect = 1e-35 Identities = 113/124 (91%) Strand = Plus / Minus Query: 299 ccctggacagtggtcaggctcttgcgaccattacgctgctggatgcgtacatgcacgtag 358 ||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||| Sbjct: 152 ccctggacagtggtcaggctcttacggccattacgctgctggatgcgtacatgaacgtag 93 Query: 359 tcctttgatccggcagctgcaccagcgtccccagcattcgcctcggcaaaggggtcaaag 418 ||||||||||| ||||| ||||||| ||| |||||||| ||||| |||||||| || ||| Sbjct: 92 tcctttgatcctgcagccgcaccagagtctccagcattggcctcagcaaagggatcgaag 33 Query: 419 gcag 422 |||| Sbjct: 32 gcag 29 Score = 125 bits (63), Expect = 1e-25 Identities = 81/87 (93%) Strand = Plus / Minus Query: 217 tcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctggacaaggaagtt 276 |||||||||||||||||||||||||||||||||||||||||| ||||| ||||| || || Sbjct: 348 tcagaaaccatgaatcttgatgtgttccttcttcacaatgccggcctgaacaagaaaatt 289 Query: 277 tgagacgttcttcctctgatcaccctg 303 ||| ||||| ||||||||||||||||| Sbjct: 288 tgatacgtttttcctctgatcaccctg 262 Score = 93.7 bits (47), Expect = 5e-16 Identities = 56/59 (94%) Strand = Plus / Minus Query: 419 gcagcaaaactctttcttgaggtctttgaggatcttgctgtagctgaactccttcttca 477 ||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||| Sbjct: 213 gcagcaaaactctttcttgagatctttgaggatcttgttgtagctgaattccttcttca 155
>gb|DQ083224.1| Oryza sativa (indica cultivar-group) clone 5B11F72 mRNA sequence Length = 358 Score = 159 bits (80), Expect = 1e-35 Identities = 113/124 (91%) Strand = Plus / Minus Query: 299 ccctggacagtggtcaggctcttgcgaccattacgctgctggatgcgtacatgcacgtag 358 ||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||| Sbjct: 295 ccctggacagtggtcaggctcttacggccattacgctgctggatgcgtacatgaacgtag 236 Query: 359 tcctttgatccggcagctgcaccagcgtccccagcattcgcctcggcaaaggggtcaaag 418 ||||||||||| ||||| ||||||| ||| |||||||| ||||| |||||||| || ||| Sbjct: 235 tcctttgatcctgcagccgcaccagagtctccagcattggcctcagcaaagggatcgaag 176 Query: 419 gcag 422 |||| Sbjct: 175 gcag 172 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Minus Query: 419 gcagcaaaactctttcttgaggtctttgaggatcttgctgtagctgaactccttcttca 477 ||||||||||||||||||||| ||||| ||||||||| |||||||||| |||||||||| Sbjct: 356 gcagcaaaactctttcttgagatctttaaggatcttgttgtagctgaattccttcttca 298
>gb|AF380357.1|AF380357 Porteresia coarctata translational initiation factor eIF1 mRNA, complete cds Length = 773 Score = 159 bits (80), Expect = 1e-35 Identities = 113/124 (91%) Strand = Plus / Minus Query: 299 ccctggacagtggtcaggctcttgcgaccattacgctgctggatgcgtacatgcacgtag 358 ||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||| Sbjct: 307 ccctggacagtggtcaggctcttacggccattacgctgctggatgcgtacatgaacgtag 248 Query: 359 tcctttgatccggcagctgcaccagcgtccccagcattcgcctcggcaaaggggtcaaag 418 ||||||||||| ||||| ||||||| ||| |||||||| ||||| |||||||| || ||| Sbjct: 247 tcctttgatcctgcagccgcaccagagtctccagcattggcctcagcaaagggatcgaag 188 Query: 419 gcag 422 |||| Sbjct: 187 gcag 184 Score = 131 bits (66), Expect = 2e-27 Identities = 84/90 (93%) Strand = Plus / Minus Query: 214 tgctcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctggacaaggaa 273 ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| || Sbjct: 506 tgctcagaaaccatgaatcttgatgtgttccttcttcacaatgccggcctgaacaagaaa 447 Query: 274 gtttgagacgttcttcctctgatcaccctg 303 ||||| ||||| ||||||||||||||||| Sbjct: 446 atttgatacgtttttcctctgatcaccctg 417 Score = 93.7 bits (47), Expect = 5e-16 Identities = 56/59 (94%) Strand = Plus / Minus Query: 419 gcagcaaaactctttcttgaggtctttgaggatcttgctgtagctgaactccttcttca 477 ||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||| Sbjct: 368 gcagcaaaactctttcttgagatctttgaggatcttgttgtagctgaattccttcttca 310
>dbj|AK120697.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170I05, full insert sequence Length = 752 Score = 159 bits (80), Expect = 1e-35 Identities = 113/124 (91%) Strand = Plus / Minus Query: 299 ccctggacagtggtcaggctcttgcgaccattacgctgctggatgcgtacatgcacgtag 358 ||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||| Sbjct: 330 ccctggacagtggtcaggctcttacggccattacgctgctggatgcgtacatgaacgtag 271 Query: 359 tcctttgatccggcagctgcaccagcgtccccagcattcgcctcggcaaaggggtcaaag 418 ||||||||||| ||||| ||||||| ||| |||||||| ||||| |||||||| || ||| Sbjct: 270 tcctttgatcctgcagccgcaccagagtctccagcattggcctcagcaaagggatcgaag 211 Query: 419 gcag 422 |||| Sbjct: 210 gcag 207 Score = 145 bits (73), Expect = 2e-31 Identities = 91/97 (93%) Strand = Plus / Minus Query: 207 tggcagttgctcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctgga 266 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 536 tggcagttgctcagaaaccatgaatcttgatgtgttccttcttcacaatgccggcctgaa 477 Query: 267 caaggaagtttgagacgttcttcctctgatcaccctg 303 |||| || ||||| ||||| ||||||||||||||||| Sbjct: 476 caagaaaatttgatacgtttttcctctgatcaccctg 440 Score = 93.7 bits (47), Expect = 5e-16 Identities = 56/59 (94%) Strand = Plus / Minus Query: 419 gcagcaaaactctttcttgaggtctttgaggatcttgctgtagctgaactccttcttca 477 ||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||| Sbjct: 391 gcagcaaaactctttcttgagatctttgaggatcttgttgtagctgaattccttcttca 333
>dbj|AK105037.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-C07, full insert sequence Length = 1275 Score = 159 bits (80), Expect = 1e-35 Identities = 113/124 (91%) Strand = Plus / Minus Query: 299 ccctggacagtggtcaggctcttgcgaccattacgctgctggatgcgtacatgcacgtag 358 ||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||| Sbjct: 853 ccctggacagtggtcaggctcttacggccattacgctgctggatgcgtacatgaacgtag 794 Query: 359 tcctttgatccggcagctgcaccagcgtccccagcattcgcctcggcaaaggggtcaaag 418 ||||||||||| ||||| ||||||| ||| |||||||| ||||| |||||||| || ||| Sbjct: 793 tcctttgatcctgcagccgcaccagagtctccagcattggcctcagcaaagggatcgaag 734 Query: 419 gcag 422 |||| Sbjct: 733 gcag 730 Score = 145 bits (73), Expect = 2e-31 Identities = 91/97 (93%) Strand = Plus / Minus Query: 207 tggcagttgctcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctgga 266 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 1059 tggcagttgctcagaaaccatgaatcttgatgtgttccttcttcacaatgccggcctgaa 1000 Query: 267 caaggaagtttgagacgttcttcctctgatcaccctg 303 |||| || ||||| ||||| ||||||||||||||||| Sbjct: 999 caagaaaatttgatacgtttttcctctgatcaccctg 963 Score = 93.7 bits (47), Expect = 5e-16 Identities = 56/59 (94%) Strand = Plus / Minus Query: 419 gcagcaaaactctttcttgaggtctttgaggatcttgctgtagctgaactccttcttca 477 ||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||| Sbjct: 914 gcagcaaaactctttcttgagatctttgaggatcttgttgtagctgaattccttcttca 856
>gb|AF094774.1|AF094774 Oryza sativa translation initiation factor (GOS2) mRNA, complete cds Length = 744 Score = 159 bits (80), Expect = 1e-35 Identities = 113/124 (91%) Strand = Plus / Minus Query: 299 ccctggacagtggtcaggctcttgcgaccattacgctgctggatgcgtacatgcacgtag 358 ||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||| Sbjct: 310 ccctggacagtggtcaggctcttacggccattacgctgctggatgcgtacatgaacgtag 251 Query: 359 tcctttgatccggcagctgcaccagcgtccccagcattcgcctcggcaaaggggtcaaag 418 ||||||||||| ||||| ||||||| ||| |||||||| ||||| |||||||| || ||| Sbjct: 250 tcctttgatcctgcagccgcaccagagtctccagcattggcctcagcaaagggatcgaag 191 Query: 419 gcag 422 |||| Sbjct: 190 gcag 187 Score = 145 bits (73), Expect = 2e-31 Identities = 91/97 (93%) Strand = Plus / Minus Query: 207 tggcagttgctcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctgga 266 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 516 tggcagttgctcagaaaccatgaatcttgatgtgttccttcttcacaatgccggcctgaa 457 Query: 267 caaggaagtttgagacgttcttcctctgatcaccctg 303 |||| || ||||| ||||| ||||||||||||||||| Sbjct: 456 caagaaaatttgatacgtttttcctctgatcaccctg 420 Score = 93.7 bits (47), Expect = 5e-16 Identities = 56/59 (94%) Strand = Plus / Minus Query: 419 gcagcaaaactctttcttgaggtctttgaggatcttgctgtagctgaactccttcttca 477 ||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||| Sbjct: 371 gcagcaaaactctttcttgagatctttgaggatcttgttgtagctgaattccttcttca 313
>emb|X51910.1|OSGOS2G O.sativa (rice) constitutive GOS2 gene Length = 3192 Score = 153 bits (77), Expect = 6e-34 Identities = 104/113 (92%) Strand = Plus / Minus Query: 299 ccctggacagtggtcaggctcttgcgaccattacgctgctggatgcgtacatgcacgtag 358 ||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||| Sbjct: 2436 ccctggacagtggtcaggctcttacggccattacgctgctggatgcgtacatgaacgtag 2377 Query: 359 tcctttgatccggcagctgcaccagcgtccccagcattcgcctcggcaaaggg 411 ||||||||||| ||||| ||||||| ||| |||||||| ||||| |||||||| Sbjct: 2376 tcctttgatcctgcagccgcaccagagtctccagcattggcctcagcaaaggg 2324 Score = 105 bits (53), Expect = 1e-19 Identities = 56/57 (98%) Strand = Plus / Minus Query: 208 ggcagttgctcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctg 264 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 2838 ggcagttgctcagaaaccatgaatcttgatgtgttccttcttcacaatgccggcctg 2782 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Minus Query: 419 gcagcaaaactctttcttgaggtctttgaggatcttgctgtagctgaactccttcttca 477 ||||||||||||||||||||| ||||| ||||||||| |||||||||| |||||||||| Sbjct: 2497 gcagcaaaactctttcttgagatctttaaggatcttgttgtagctgaattccttcttca 2439 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 261 cctggacaaggaagtttgagacgttcttcctctgatcaccctg 303 |||| ||||| || ||||| ||||||||||||||||||||||| Sbjct: 2679 cctgaacaagaaaatttgatacgttcttcctctgatcaccctg 2637
>gb|DQ083223.1| Oryza sativa (indica cultivar-group) clone 5B12A69 mRNA sequence Length = 209 Score = 153 bits (77), Expect = 6e-34 Identities = 92/97 (94%) Strand = Plus / Minus Query: 207 tggcagttgctcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctgga 266 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 139 tggcagttgctcagaaaccatgaatcttgatgtgttccttcttcacaatgccggcctgaa 80 Query: 267 caaggaagtttgagacgttcttcctctgatcaccctg 303 |||| || ||||| ||||||||||||||||||||||| Sbjct: 79 caagaaaatttgatacgttcttcctctgatcaccctg 43
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 153 bits (77), Expect = 6e-34 Identities = 104/113 (92%) Strand = Plus / Plus Query: 299 ccctggacagtggtcaggctcttgcgaccattacgctgctggatgcgtacatgcacgtag 358 ||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||| Sbjct: 20680276 ccctggacagtggtcaggctcttacggccattacgctgctggatgcgtacatgaacgtag 20680335 Query: 359 tcctttgatccggcagctgcaccagcgtccccagcattcgcctcggcaaaggg 411 ||||||||||| ||||| ||||||| ||| |||||||| ||||| |||||||| Sbjct: 20680336 tcctttgatcctgcagccgcaccagagtctccagcattggcctcagcaaaggg 20680388 Score = 107 bits (54), Expect = 3e-20 Identities = 57/58 (98%) Strand = Plus / Plus Query: 207 tggcagttgctcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctg 264 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 20679873 tggcagttgctcagaaaccatgaatcttgatgtgttccttcttcacaatgccggcctg 20679930 Score = 93.7 bits (47), Expect = 5e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 419 gcagcaaaactctttcttgaggtctttgaggatcttgctgtagctgaactccttcttca 477 ||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||| Sbjct: 20680215 gcagcaaaactctttcttgagatctttgaggatcttgttgtagctgaattccttcttca 20680273 Score = 46.1 bits (23), Expect = 0.11 Identities = 38/43 (88%) Strand = Plus / Plus Query: 261 cctggacaaggaagtttgagacgttcttcctctgatcaccctg 303 |||| ||||| || ||||| ||||| ||||||||||||||||| Sbjct: 20680033 cctgaacaagaaaatttgatacgtttttcctctgatcaccctg 20680075
>dbj|AP004674.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0681F05 Length = 144741 Score = 153 bits (77), Expect = 6e-34 Identities = 104/113 (92%) Strand = Plus / Plus Query: 299 ccctggacagtggtcaggctcttgcgaccattacgctgctggatgcgtacatgcacgtag 358 ||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||| Sbjct: 33026 ccctggacagtggtcaggctcttacggccattacgctgctggatgcgtacatgaacgtag 33085 Query: 359 tcctttgatccggcagctgcaccagcgtccccagcattcgcctcggcaaaggg 411 ||||||||||| ||||| ||||||| ||| |||||||| ||||| |||||||| Sbjct: 33086 tcctttgatcctgcagccgcaccagagtctccagcattggcctcagcaaaggg 33138 Score = 107 bits (54), Expect = 3e-20 Identities = 57/58 (98%) Strand = Plus / Plus Query: 207 tggcagttgctcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctg 264 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 32623 tggcagttgctcagaaaccatgaatcttgatgtgttccttcttcacaatgccggcctg 32680 Score = 93.7 bits (47), Expect = 5e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 419 gcagcaaaactctttcttgaggtctttgaggatcttgctgtagctgaactccttcttca 477 ||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||| Sbjct: 32965 gcagcaaaactctttcttgagatctttgaggatcttgttgtagctgaattccttcttca 33023 Score = 46.1 bits (23), Expect = 0.11 Identities = 38/43 (88%) Strand = Plus / Plus Query: 261 cctggacaaggaagtttgagacgttcttcctctgatcaccctg 303 |||| ||||| || ||||| ||||| ||||||||||||||||| Sbjct: 32783 cctgaacaagaaaatttgatacgtttttcctctgatcaccctg 32825
>gb|BT016285.1| Zea mays clone Contig118 mRNA sequence Length = 861 Score = 147 bits (74), Expect = 4e-32 Identities = 89/94 (94%) Strand = Plus / Minus Query: 212 gttgctcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctggacaagg 271 ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||| Sbjct: 598 gttgctcagaaaccatgaatcttgatgtgctccttcttcacaatgccggcctggacgagg 539 Query: 272 aagtttgagacgttcttcctctgatcaccctgga 305 || || |||||||||||||||||||||||||||| Sbjct: 538 aaattcgagacgttcttcctctgatcaccctgga 505 Score = 127 bits (64), Expect = 4e-26 Identities = 109/124 (87%) Strand = Plus / Minus Query: 299 ccctggacagtggtcaggctcttgcgaccattacgctgctggatgcgtacatgcacgtag 358 |||||||| || ||||||||||||||||||||||||||||||||||| || || |||||| Sbjct: 397 ccctggacggtagtcaggctcttgcgaccattacgctgctggatgcgcacgtgtacgtag 338 Query: 359 tcctttgatccggcagctgcaccagcgtccccagcattcgcctcggcaaaggggtcaaag 418 |||||||| || || || ||||||| |||||||||||| ||||| || ||||| || ||| Sbjct: 337 tcctttgaccctgctgccgcaccagagtccccagcattggcctcagcgaagggatcgaag 278 Query: 419 gcag 422 |||| Sbjct: 277 gcag 274 Score = 101 bits (51), Expect = 2e-18 Identities = 57/59 (96%) Strand = Plus / Minus Query: 419 gcagcaaaactctttcttgaggtctttgaggatcttgctgtagctgaactccttcttca 477 |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 458 gcagcagaactctttcttgagatctttgaggatcttgctgtagctgaactccttcttca 400
>emb|AJ242801.1|SST242801 Sporobolus stapfianus partial mRNA for putative translation initiation factor eIF-1 Length = 796 Score = 147 bits (74), Expect = 4e-32 Identities = 92/98 (93%) Strand = Plus / Minus Query: 206 ctggcagttgctcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctgg 265 |||||||||||||| ||||||||||| |||||||| ||||| ||||||||||| |||||| Sbjct: 526 ctggcagttgctcaaaaaccatgaattttgatgtgctcctttttcacaatgccggcctgg 467 Query: 266 acaaggaagtttgagacgttcttcctctgatcaccctg 303 |||||||| ||||||||||||||||||||||||||||| Sbjct: 466 acaaggaaatttgagacgttcttcctctgatcaccctg 429 Score = 145 bits (73), Expect = 2e-31 Identities = 112/125 (89%) Strand = Plus / Minus Query: 298 accctggacagtggtcaggctcttgcgaccattacgctgctggatgcgtacatgcacgta 357 |||||| ||||| ||||| ||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 320 accctgaacagtcgtcagactcttgcgaccattacgctgctggatgcgcacatgaacgta 261 Query: 358 gtcctttgatccggcagctgcaccagcgtccccagcattcgcctcggcaaaggggtcaaa 417 |||||||||||| ||||| ||||||| |||||||||||| ||||| | |||||| || || Sbjct: 260 gtcctttgatcctgcagccgcaccagagtccccagcattggcctcagaaaagggatcgaa 201 Query: 418 ggcag 422 ||||| Sbjct: 200 ggcag 196 Score = 79.8 bits (40), Expect = 8e-12 Identities = 58/64 (90%) Strand = Plus / Minus Query: 419 gcagcaaaactctttcttgaggtctttgaggatcttgctgtagctgaactccttcttcag 478 |||||| ||||| |||||||||||||| ||||||||| |||||||||| |||||||||| Sbjct: 380 gcagcagaactccttcttgaggtctttcaggatcttgttgtagctgaattccttcttcaa 321 Query: 479 accc 482 |||| Sbjct: 320 accc 317
>gb|AY103847.1| Zea mays PCO105184 mRNA sequence Length = 1006 Score = 147 bits (74), Expect = 4e-32 Identities = 89/94 (94%) Strand = Plus / Minus Query: 212 gttgctcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctggacaagg 271 ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||| Sbjct: 716 gttgctcagaaaccatgaatcttgatgtgctccttcttcacaatgccggcctggacgagg 657 Query: 272 aagtttgagacgttcttcctctgatcaccctgga 305 || || |||||||||||||||||||||||||||| Sbjct: 656 aaattcgagacgttcttcctctgatcaccctgga 623 Score = 127 bits (64), Expect = 4e-26 Identities = 109/124 (87%) Strand = Plus / Minus Query: 299 ccctggacagtggtcaggctcttgcgaccattacgctgctggatgcgtacatgcacgtag 358 |||||||| || ||||||||||||||||||||||||||||||||||| || || |||||| Sbjct: 515 ccctggacggtagtcaggctcttgcgaccattacgctgctggatgcgcacgtgtacgtag 456 Query: 359 tcctttgatccggcagctgcaccagcgtccccagcattcgcctcggcaaaggggtcaaag 418 |||||||| || || || ||||||| |||||||||||| ||||| || ||||| || ||| Sbjct: 455 tcctttgaccctgctgccgcaccagagtccccagcattggcctcagcgaagggatcgaag 396 Query: 419 gcag 422 |||| Sbjct: 395 gcag 392 Score = 101 bits (51), Expect = 2e-18 Identities = 57/59 (96%) Strand = Plus / Minus Query: 419 gcagcaaaactctttcttgaggtctttgaggatcttgctgtagctgaactccttcttca 477 |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 576 gcagcagaactctttcttgagatctttgaggatcttgctgtagctgaactccttcttca 518
>gb|AF034944.1|AF034944 Zea mays translation initiation factor GOS2 (TIF) mRNA, complete cds Length = 759 Score = 147 bits (74), Expect = 4e-32 Identities = 89/94 (94%) Strand = Plus / Minus Query: 212 gttgctcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctggacaagg 271 ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||| Sbjct: 488 gttgctcagaaaccatgaatcttgatgtgctccttcttcacaatgccggcctggacgagg 429 Query: 272 aagtttgagacgttcttcctctgatcaccctgga 305 || || |||||||||||||||||||||||||||| Sbjct: 428 aaattcgagacgttcttcctctgatcaccctgga 395 Score = 135 bits (68), Expect = 1e-28 Identities = 110/124 (88%) Strand = Plus / Minus Query: 299 ccctggacagtggtcaggctcttgcgaccattacgctgctggatgcgtacatgcacgtag 358 |||||||| |||||||||||||||||||||||||||||||||||||| || || |||||| Sbjct: 287 ccctggacggtggtcaggctcttgcgaccattacgctgctggatgcgcacgtgtacgtag 228 Query: 359 tcctttgatccggcagctgcaccagcgtccccagcattcgcctcggcaaaggggtcaaag 418 |||||||| || || || ||||||| |||||||||||| ||||| || ||||| || ||| Sbjct: 227 tcctttgaccctgctgccgcaccagagtccccagcattggcctcagcgaagggatcgaag 168 Query: 419 gcag 422 |||| Sbjct: 167 gcag 164 Score = 101 bits (51), Expect = 2e-18 Identities = 57/59 (96%) Strand = Plus / Minus Query: 419 gcagcaaaactctttcttgaggtctttgaggatcttgctgtagctgaactccttcttca 477 |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 348 gcagcagaactctttcttgagatctttgaggatcttgctgtagctgaactccttcttca 290
>dbj|D10959.1|RIC407GS2 Oryza sativa mRNA for GOS2 Length = 366 Score = 125 bits (63), Expect = 1e-25 Identities = 90/99 (90%) Strand = Plus / Minus Query: 207 tggcagttgctcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctgga 266 ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| | Sbjct: 151 tggcagttgctcagaaaccatgattcttgatgtgttccttcttcacaatgccggcctgaa 92 Query: 267 caaggaagtttgagacgttcttcctctgatcaccctgga 305 |||| || |||| ||||| |||||||| |||||||||| Sbjct: 91 caagaaaatttggtacgtttttcctctgttcaccctgga 53
>gb|BT013323.1| Lycopersicon esculentum clone 135043R, mRNA sequence Length = 787 Score = 89.7 bits (45), Expect = 8e-15 Identities = 78/89 (87%) Strand = Plus / Minus Query: 217 tcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctggacaaggaagtt 276 ||||||||||||||| ||||||||||| |||||||| || || ||||||||||| || | Sbjct: 511 tcagaaaccatgaattttgatgtgttctttcttcacgattccagcctggacaagaaatgt 452 Query: 277 tgagacgttcttcctctgatcaccctgga 305 || |||||||| |||||||||||||||| Sbjct: 451 agaaacgttctttctctgatcaccctgga 423 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 419 gcagcaaaactctttcttgaggtctttgaggatcttgctgtagctgaactccttcttca 477 |||||||||||||||||| ||||| || || || || |||||||||| || ||||||| Sbjct: 376 gcagcaaaactctttcttaaggtcctttagtattttattgtagctgaattctttcttca 318
>dbj|AB003378.1| Salix bakko mRNA for SUI1 homolog, complete cds Length = 700 Score = 89.7 bits (45), Expect = 8e-15 Identities = 75/85 (88%) Strand = Plus / Minus Query: 219 agaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctggacaaggaagtttg 278 ||||||||||||||||||| | ||||||||||||||| || ||||| || |||||| | Sbjct: 478 agaaaccatgaatcttgatattttccttcttcacaataccagcctgcacgaggaaggagg 419 Query: 279 agacgttcttcctctgatcaccctg 303 ||||||||||||| ||||||||||| Sbjct: 418 agacgttcttcctttgatcaccctg 394 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 419 gcagcaaaactctttcttgaggtctttgaggatcttgctgtagctgaactccttcttca 477 |||||| ||||||||||||||||| || || |||||| ||||||| | |||||||||| Sbjct: 345 gcagcagaactctttcttgaggtccttaagtatcttgttgtagctatagtccttcttca 287
>gb|BT013262.1| Lycopersicon esculentum clone 134804F, mRNA sequence Length = 1343 Score = 85.7 bits (43), Expect = 1e-13 Identities = 76/87 (87%) Strand = Plus / Minus Query: 217 tcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctggacaaggaagtt 276 ||||||||||||||| |||||||| || |||||||| || || ||||||||||| ||| | Sbjct: 1114 tcagaaaccatgaattttgatgtgctctttcttcacgattccagcctggacaagaaaggt 1055 Query: 277 tgagacgttcttcctctgatcaccctg 303 || |||||||||||||| |||||||| Sbjct: 1054 agaaacgttcttcctctggtcaccctg 1028
>ref|NM_118847.2| Arabidopsis thaliana translation initiation factor AT4G27130 mRNA, complete cds Length = 811 Score = 79.8 bits (40), Expect = 8e-12 Identities = 73/84 (86%) Strand = Plus / Minus Query: 214 tgctcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctggacaaggaa 273 ||||||||||||||| |||||||||| || |||||||||| || |||||||| ||||| Sbjct: 595 tgctcagaaaccatggatcttgatgttatctttcttcacaagcccagcctggactaggaa 536 Query: 274 gtttgagacgttcttcctctgatc 297 | |||||||||||||||||||| Sbjct: 535 cgtggagacgttcttcctctgatc 512 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 419 gcagcaaaactctttcttgaggtctttgaggatcttgctgtagctgaactccttcttcag 478 ||||||||| |||||||||||||| || || |||||| |||||||| |||| |||||||| Sbjct: 457 gcagcaaaattctttcttgaggtccttaagtatcttggtgtagctgtactctttcttcag 398
>gb|DQ083225.1| Oryza sativa (indica cultivar-group) clone 5B11G73 mRNA sequence Length = 268 Score = 79.8 bits (40), Expect = 8e-12 Identities = 67/76 (88%) Strand = Plus / Minus Query: 347 acatgcacgtagtcctttgatccggcagctgcaccagcgtccccagcattcgcctcggca 406 ||||| ||||||||||||||||| ||||| ||||||| ||| |||||||| ||||| ||| Sbjct: 268 acatgaacgtagtcctttgatcctgcagccgcaccagagtctccagcattggcctcagca 209 Query: 407 aaggggtcaaaggcag 422 ||||| || ||||||| Sbjct: 208 aagggatcgaaggcag 193
>gb|AY037234.1| Arabidopsis thaliana AT4g27130/T24A18_80 mRNA, complete cds Length = 737 Score = 79.8 bits (40), Expect = 8e-12 Identities = 73/84 (86%) Strand = Plus / Minus Query: 214 tgctcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctggacaaggaa 273 ||||||||||||||| |||||||||| || |||||||||| || |||||||| ||||| Sbjct: 547 tgctcagaaaccatggatcttgatgttatctttcttcacaagcccagcctggactaggaa 488 Query: 274 gtttgagacgttcttcctctgatc 297 | |||||||||||||||||||| Sbjct: 487 cgtggagacgttcttcctctgatc 464 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 419 gcagcaaaactctttcttgaggtctttgaggatcttgctgtagctgaactccttcttcag 478 ||||||||| |||||||||||||| || || |||||| |||||||| |||| |||||||| Sbjct: 409 gcagcaaaattctttcttgaggtccttaagtatcttggtgtagctgtactctttcttcag 350
>emb|BX828314.1|CNS0A3U9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH75ZH04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 738 Score = 79.8 bits (40), Expect = 8e-12 Identities = 73/84 (86%) Strand = Plus / Minus Query: 214 tgctcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctggacaaggaa 273 ||||||||||||||| |||||||||| || |||||||||| || |||||||| ||||| Sbjct: 524 tgctcagaaaccatggatcttgatgttatctttcttcacaagcccagcctggactaggaa 465 Query: 274 gtttgagacgttcttcctctgatc 297 | |||||||||||||||||||| Sbjct: 464 cgtggagacgttcttcctctgatc 441 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 419 gcagcaaaactctttcttgaggtctttgaggatcttgctgtagctgaactccttcttcag 478 ||||||||| |||||||||||||| || || |||||| |||||||| |||| |||||||| Sbjct: 386 gcagcaaaattctttcttgaggtccttaagtatcttggtgtagctgtactctttcttcag 327
>emb|BX828730.1|CNS0A3GG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL33ZF02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 735 Score = 79.8 bits (40), Expect = 8e-12 Identities = 73/84 (86%) Strand = Plus / Minus Query: 214 tgctcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctggacaaggaa 273 ||||||||||||||| |||||||||| || |||||||||| || |||||||| ||||| Sbjct: 525 tgctcagaaaccatggatcttgatgttatctttcttcacaagcccagcctggactaggaa 466 Query: 274 gtttgagacgttcttcctctgatc 297 | |||||||||||||||||||| Sbjct: 465 cgtggagacgttcttcctctgatc 442 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 419 gcagcaaaactctttcttgaggtctttgaggatcttgctgtagctgaactccttcttcag 478 ||||||||| |||||||||||||| || || |||||| |||||||| |||| |||||||| Sbjct: 387 gcagcaaaattctttcttgaggtccttaagtatcttggtgtagctgtactctttcttcag 328
>gb|AY088288.1| Arabidopsis thaliana clone 5206 mRNA, complete sequence Length = 805 Score = 79.8 bits (40), Expect = 8e-12 Identities = 73/84 (86%) Strand = Plus / Minus Query: 214 tgctcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctggacaaggaa 273 ||||||||||||||| |||||||||| || |||||||||| || |||||||| ||||| Sbjct: 595 tgctcagaaaccatggatcttgatgttatctttcttcacaagcccagcctggactaggaa 536 Query: 274 gtttgagacgttcttcctctgatc 297 | |||||||||||||||||||| Sbjct: 535 cgtggagacgttcttcctctgatc 512 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 419 gcagcaaaactctttcttgaggtctttgaggatcttgctgtagctgaactccttcttcag 478 ||||||||| |||||||||||||| || || |||||| |||||||| |||| |||||||| Sbjct: 457 gcagcaaaattctttcttgaggtccttaagtatcttggtgtagctgtactctttcttcag 398
>gb|AF098672.1|AF098672 Brassica oleracea translation initiation factor nps45 mRNA, complete cds Length = 560 Score = 79.8 bits (40), Expect = 8e-12 Identities = 70/80 (87%) Strand = Plus / Minus Query: 215 gctcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctggacaaggaag 274 |||||||||||||| |||| ||||| ||||||||||||| || |||||||||||||| Sbjct: 371 gctcagaaaccatggatctggatgtcgtccttcttcacaagcccagcctggacaaggaac 312 Query: 275 tttgagacgttcttcctctg 294 | ||||||||||||||||| Sbjct: 311 gtggagacgttcttcctctg 292 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 423 caaaactctttcttgaggtctttgaggatcttgctgtagctgaactccttcttcag 478 ||||||||||||||||| || || || |||||| |||||||| |||| |||||||| Sbjct: 230 caaaactctttcttgagatccttaagtatcttggtgtagctgtactctttcttcag 175 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Minus Query: 299 ccctggacagtggtcaggctcttgcgaccattacgctgctg 339 ||||||||||| |||| ||| || | ||||||||||||||| Sbjct: 173 ccctggacagttgtcaagcttttcctaccattacgctgctg 133
>gb|AY060537.1| Arabidopsis thaliana AT4g27130/T24A18_80 mRNA, complete cds Length = 342 Score = 73.8 bits (37), Expect = 5e-10 Identities = 70/81 (86%) Strand = Plus / Minus Query: 217 tcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctggacaaggaagtt 276 |||||||||||| |||||||||| || |||||||||| || |||||||| ||||| | Sbjct: 342 tcagaaaccatggatcttgatgttatctttcttcacaagcccagcctggactaggaacgt 283 Query: 277 tgagacgttcttcctctgatc 297 |||||||||||||||||||| Sbjct: 282 ggagacgttcttcctctgatc 262 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 419 gcagcaaaactctttcttgaggtctttgaggatcttgctgtagctgaactccttcttcag 478 ||||||||| |||||||||||||| || || |||||| |||||||| |||| |||||||| Sbjct: 207 gcagcaaaattctttcttgaggtccttaagtatcttggtgtagctgtactctttcttcag 148
>gb|DQ222518.1| Solanum tuberosum clone 120A06 unknown mRNA Length = 699 Score = 69.9 bits (35), Expect = 7e-09 Identities = 74/87 (85%) Strand = Plus / Minus Query: 217 tcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctggacaaggaagtt 276 ||||||||||||||| |||||||| || ||||||||||| || ||||||||||| || | Sbjct: 487 tcagaaaccatgaattttgatgtgctctttcttcacaattccagcctggacaagaaatgt 428 Query: 277 tgagacgttcttcctctgatcaccctg 303 || |||||||||| ||| ||| |||| Sbjct: 427 agaaacgttcttccgctggtcatcctg 401
>gb|L41693.1|PS300016E Eucalyptus globulus bicostata symbiont (F00058) mRNA, ESTun016 Length = 256 Score = 69.9 bits (35), Expect = 7e-09 Identities = 56/63 (88%) Strand = Plus / Minus Query: 419 gcagcaaaactctttcttgaggtctttgaggatcttgctgtagctgaactccttcttcag 478 ||||||||| | |||||| ||||| ||||| |||||| | |||||||||||||||||||| Sbjct: 232 gcagcaaaattgtttcttcaggtccttgagtatcttgttatagctgaactccttcttcag 173 Query: 479 acc 481 ||| Sbjct: 172 acc 170
>emb|AJ519839.1|CAR519839 Coffea arabica mRNA for SUI1 protein Length = 678 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 221 aaaccatgaatcttgatgtgttccttcttcacaatgcccgcctggacaaggaagtttgag 280 |||||||||||||| |||||||||||||| || || || ||||| ||||||||| |||| Sbjct: 472 aaaccatgaatctttatgtgttccttctttacgatcccagcctgaacaaggaagcttgaa 413 Query: 281 acgttcttcctctgatc 297 || ||||| | |||||| Sbjct: 412 acattcttacgctgatc 396 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 419 gcagcaaaactctttcttgaggtctttgaggatcttgctgtagctgaactccttcttca 477 |||||||||||||||||||||||| || ||||| || |||| |||||||| ||||||| Sbjct: 341 gcagcaaaactctttcttgaggtccttcaggattttattgtaactgaactctttcttca 283
>gb|AY104121.1| Zea mays PCO141133 mRNA sequence Length = 815 Score = 65.9 bits (33), Expect = 1e-07 Identities = 102/125 (81%) Strand = Plus / Minus Query: 298 accctggacagtggtcaggctcttgcgaccattacgctgctggatgcgtacatgcacgta 357 ||||||||| || ||||| ||||| | || || |||||||||||||| |||||||| || Sbjct: 318 accctggactgtagtcagactctttctgccgttgcgctgctggatgcgcacatgcacata 259 Query: 358 gtcctttgatccggcagctgcaccagcgtccccagcattcgcctcggcaaaggggtcaaa 417 ||||| | ||| | | | ||||||| |||| ||||||| ||||| ||||| || ||||| Sbjct: 258 atccttcgttccaggaccagcaccagagtcctcagcatttgcctcagcaaacggatcaaa 199 Query: 418 ggcag 422 ||||| Sbjct: 198 ggcag 194 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 419 gcagcaaaactctttcttgaggtctttgaggatcttgctgtagctgaactccttcttcag 478 |||||| || || ||||| || || |||||||||||| | ||||||||||| |||||||| Sbjct: 378 gcagcagaattccttcttcagatccttgaggatcttgttatagctgaactctttcttcag 319 Query: 479 accc 482 |||| Sbjct: 318 accc 315
>ref|NM_104307.3| Arabidopsis thaliana translation initiation factor AT1G54290 mRNA, complete cds Length = 811 Score = 63.9 bits (32), Expect = 4e-07 Identities = 74/88 (84%) Strand = Plus / Minus Query: 213 ttgctcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctggacaagga 272 ||||||| |||||||| || || |||| ||||||||||||| || ||||| ||||||| Sbjct: 590 ttgctcaaaaaccatggatttttatgttatccttcttcacaagcccagcctgaacaagga 531 Query: 273 agtttgagacgttcttcctctgatcacc 300 | | || |||||||||||||||||||| Sbjct: 530 acgtagatacgttcttcctctgatcacc 503 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Minus Query: 299 ccctggacagtggtcaggctcttgcgaccattacgctgctg 339 ||||||||||| |||| ||| || | ||||||||||||||| Sbjct: 390 ccctggacagttgtcaagctttttctaccattacgctgctg 350
>ref|NM_124857.2| Arabidopsis thaliana translation initiation factor AT5G54760 mRNA, complete cds Length = 706 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 419 gcagcaaaactctttcttgaggtctttgaggatcttgctgtagctgaactccttcttcag 478 |||||||||||||||||||||||| || || |||||| | |||||| |||| |||||||| Sbjct: 353 gcagcaaaactctttcttgaggtccttaagtatcttggtatagctgtactctttcttcag 294 Score = 60.0 bits (30), Expect = 7e-06 Identities = 60/70 (85%) Strand = Plus / Minus Query: 219 agaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctggacaaggaagtttg 278 |||||||||| |||||||||| ||||||||||| | || |||||||||||||| | | Sbjct: 486 agaaaccatggatcttgatgttatccttcttcaccaaaccagcctggacaaggaatgtgg 427 Query: 279 agacgttctt 288 |||||||||| Sbjct: 426 agacgttctt 417
>gb|AY365040.1| Zea mays translation initiation factor-like gene, partial sequence Length = 656 Score = 63.9 bits (32), Expect = 4e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 419 gcagcaaaactctttcttgaggtctttgaggatcttgctgtagctgaactccttcttcag 478 |||||| || || ||||| || || |||||||||||| | |||||||||||||||||||| Sbjct: 513 gcagcagaattccttcttcagatccttgaggatcttgttatagctgaactccttcttcag 454 Query: 479 accc 482 |||| Sbjct: 453 accc 450 Score = 46.1 bits (23), Expect = 0.11 Identities = 89/111 (80%) Strand = Plus / Minus Query: 298 accctggacagtggtcaggctcttgcgaccattacgctgctggatgcgtacatgcacgta 357 ||||||||| || ||||| ||||| | || || |||||||||||||| |||||||| || Sbjct: 453 accctggactgtagtcagactctttctgccgttgcgctgctggatgcgcacatgcacata 394 Query: 358 gtcctttgatccggcagctgcaccagcgtccccagcattcgcctcggcaaa 408 ||||| | ||| | | | ||||||| | || ||||||| ||||| ||||| Sbjct: 393 atccttcgttccaggaccagcaccagagccctcagcatttgcctcagcaaa 343
>emb|AL161566.2|ATCHRIV66 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 66 Length = 198372 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 419 gcagcaaaactctttcttgaggtctttgaggatcttgctgtagctgaactccttcttcag 478 ||||||||| |||||||||||||| || || |||||| |||||||| |||| |||||||| Sbjct: 109008 gcagcaaaattctttcttgaggtccttaagtatcttggtgtagctgtactctttcttcag 109067 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 214 tgctcagaaaccatgaatcttgatgtgttccttcttcacaa 254 ||||||||||||||| |||||||||| || |||||||||| Sbjct: 108666 tgctcagaaaccatggatcttgatgttatctttcttcacaa 108706 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 261 cctggacaaggaagtttgagacgttcttcctctgatc 297 ||||||| ||||| | |||||||||||||||||||| Sbjct: 108793 cctggactaggaacgtggagacgttcttcctctgatc 108829
>emb|AL035680.1|ATT24A18 Arabidopsis thaliana DNA chromosome 4, BAC clone T24A18, partial sequence (ESSA project) Length = 45980 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 419 gcagcaaaactctttcttgaggtctttgaggatcttgctgtagctgaactccttcttcag 478 ||||||||| |||||||||||||| || || |||||| |||||||| |||| |||||||| Sbjct: 25497 gcagcaaaattctttcttgaggtccttaagtatcttggtgtagctgtactctttcttcag 25556 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 214 tgctcagaaaccatgaatcttgatgtgttccttcttcacaa 254 ||||||||||||||| |||||||||| || |||||||||| Sbjct: 25155 tgctcagaaaccatggatcttgatgttatctttcttcacaa 25195 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 261 cctggacaaggaagtttgagacgttcttcctctgatc 297 ||||||| ||||| | |||||||||||||||||||| Sbjct: 25282 cctggactaggaacgtggagacgttcttcctctgatc 25318
>gb|AF372910.1|AF372910 Arabidopsis thaliana At1g54290/F20D21_53 mRNA, complete cds Length = 742 Score = 63.9 bits (32), Expect = 4e-07 Identities = 74/88 (84%) Strand = Plus / Minus Query: 213 ttgctcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctggacaagga 272 ||||||| |||||||| || || |||| ||||||||||||| || ||||| ||||||| Sbjct: 528 ttgctcaaaaaccatggatttttatgttatccttcttcacaagcccagcctgaacaagga 469 Query: 273 agtttgagacgttcttcctctgatcacc 300 | | || |||||||||||||||||||| Sbjct: 468 acgtagatacgttcttcctctgatcacc 441 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Minus Query: 299 ccctggacagtggtcaggctcttgcgaccattacgctgctg 339 ||||||||||| |||| ||| || | ||||||||||||||| Sbjct: 328 ccctggacagttgtcaagctttttctaccattacgctgctg 288
>emb|BX817291.1|CNS0ACKO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL12ZC05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 748 Score = 63.9 bits (32), Expect = 4e-07 Identities = 74/88 (84%) Strand = Plus / Minus Query: 213 ttgctcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctggacaagga 272 ||||||| |||||||| || || |||| ||||||||||||| || ||||| ||||||| Sbjct: 527 ttgctcaaaaaccatggatttttatgttatccttcttcacaagcccagcctgaacaagga 468 Query: 273 agtttgagacgttcttcctctgatcacc 300 | | || |||||||||||||||||||| Sbjct: 467 acgtagatacgttcttcctctgatcacc 440 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Minus Query: 299 ccctggacagtggtcaggctcttgcgaccattacgctgctg 339 ||||||||||| |||| ||| || | ||||||||||||||| Sbjct: 327 ccctggacagttgtcaagctttttctaccattacgctgctg 287
>gb|BT005836.1| Arabidopsis thaliana At5g54760 gene, complete cds Length = 342 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 419 gcagcaaaactctttcttgaggtctttgaggatcttgctgtagctgaactccttcttcag 478 |||||||||||||||||||||||| || || |||||| | |||||| |||| |||||||| Sbjct: 207 gcagcaaaactctttcttgaggtccttaagtatcttggtatagctgtactctttcttcag 148 Score = 60.0 bits (30), Expect = 7e-06 Identities = 60/70 (85%) Strand = Plus / Minus Query: 219 agaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctggacaaggaagtttg 278 |||||||||| |||||||||| ||||||||||| | || |||||||||||||| | | Sbjct: 340 agaaaccatggatcttgatgttatccttcttcaccaaaccagcctggacaaggaatgtgg 281 Query: 279 agacgttctt 288 |||||||||| Sbjct: 280 agacgttctt 271
>dbj|AB005232.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBG8 Length = 80315 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 419 gcagcaaaactctttcttgaggtctttgaggatcttgctgtagctgaactccttcttcag 478 |||||||||||||||||||||||| || || |||||| | |||||| |||| |||||||| Sbjct: 4129 gcagcaaaactctttcttgaggtccttaagtatcttggtatagctgtactctttcttcag 4070 Score = 44.1 bits (22), Expect = 0.42 Identities = 31/34 (91%) Strand = Plus / Minus Query: 219 agaaaccatgaatcttgatgtgttccttcttcac 252 |||||||||| |||||||||| ||||||||||| Sbjct: 4518 agaaaccatggatcttgatgttatccttcttcac 4485
>gb|U81042.1|ATU81042 Arabidopsis thaliana translation initiation factor gene, complete cds Length = 1787 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 419 gcagcaaaactctttcttgaggtctttgaggatcttgctgtagctgaactccttcttcag 478 ||||||||| |||||||||||||| || || |||||| |||||||| |||| |||||||| Sbjct: 1260 gcagcaaaattctttcttgaggtccttaagtatcttggtgtagctgtactctttcttcag 1201 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 214 tgctcagaaaccatgaatcttgatgtgttccttcttcacaa 254 ||||||||||||||| |||||||||| || |||||||||| Sbjct: 1602 tgctcagaaaccatggatcttgatgttatctttcttcacaa 1562 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Minus Query: 261 cctggacaaggaagtttgagacgttcttcctctgatc 297 ||||||| ||||| | |||||||||||||||||||| Sbjct: 1475 cctggactaggaacgtggagacgttcttcctctgatc 1439
>gb|AY617076.1| Bassia scoparia putative translation initiation factor mRNA, partial cds Length = 207 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 419 gcagcaaaactctttcttgaggtctttgaggatcttgctgtagctgaactccttcttcag 478 |||||| ||||| || |||||||||||||| ||||| ||||||||| ||||||||||| Sbjct: 72 gcagcagaactcctttttgaggtctttgagtatcttctcgtagctgaaatccttcttcag 13 Query: 479 acc 481 ||| Sbjct: 12 acc 10
>gb|AY108531.1| Zea mays PCO112988 mRNA sequence Length = 792 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 419 gcagcaaaactctttcttgaggtctttgaggatcttgctgtagctgaactccttcttca 477 |||||| |||||||| ||||| || |||||||||||| |||||||| |||| ||||||| Sbjct: 385 gcagcagaactcttttttgagatccttgaggatcttgttgtagctgtactctttcttca 327 Score = 48.1 bits (24), Expect = 0.027 Identities = 99/124 (79%) Strand = Plus / Minus Query: 299 ccctggacagtggtcaggctcttgcgaccattacgctgctggatgcgtacatgcacgtag 358 ||||| ||||| ||||| ||||| | || || |||||||| || || || ||||| ||| Sbjct: 324 ccctgaacagttgtcagactcttccttccgttgcgctgctgaatacgcacgtgcacatag 265 Query: 359 tcctttgatccggcagctgcaccagcgtccccagcattcgcctcggcaaaggggtcaaag 418 ||||||||||| ||| | |||| | |||| ||||||| ||||| ||||| || ||||| Sbjct: 264 tcctttgatccagcaccagcactggagtcctcagcatttgcctctgcaaacggatcaaaa 205 Query: 419 gcag 422 |||| Sbjct: 204 gcag 201
>gb|BT000649.1| Arabidopsis thaliana putative protein translation factor Sui1 homolog (At1g54290/F20D21_53) mRNA, complete cds Length = 342 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 221 aaaccatgaatcttgatgtgttccttcttcacaatgcccgcctggacaaggaagtttgag 280 |||||||| || || |||| ||||||||||||| || ||||| |||||||| | || Sbjct: 338 aaaccatggatttttatgttatccttcttcacaagcccagcctgaacaaggaacgtagat 279 Query: 281 acgttcttcctctgatcacc 300 |||||||||||||||||||| Sbjct: 278 acgttcttcctctgatcacc 259 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Minus Query: 299 ccctggacagtggtcaggctcttgcgaccattacgctgctg 339 ||||||||||| |||| ||| || | ||||||||||||||| Sbjct: 146 ccctggacagttgtcaagctttttctaccattacgctgctg 106
>gb|AC146555.5| Medicago truncatula clone mth2-10p14, complete sequence Length = 127640 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 214 tgctcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctg 264 |||||||||||||||||| || || || |||||||||||||| || ||||| Sbjct: 54774 tgctcagaaaccatgaattttaatatgctccttcttcacaattccagcctg 54724 Score = 42.1 bits (21), Expect = 1.6 Identities = 57/69 (82%) Strand = Plus / Minus Query: 299 ccctggacagtggtcaggctcttgcgaccattacgctgctggatgcgtacatgcacgtag 358 ||||||||||| |||| ||| || | |||||| |||||||| || || | ||| ||||| Sbjct: 53596 ccctggacagttgtcaagctttttctaccatttcgctgctgtatacgaatatggacgtac 53537 Query: 359 tcctttgat 367 ||||||||| Sbjct: 53536 tcctttgat 53528
>emb|AJ519840.1|CAR519840 Coffea arabica sui1 gene, exons 1-5 Length = 2677 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 419 gcagcaaaactctttcttgaggtctttgaggatcttgctgtagctgaactc 469 |||||||||||||||||||||||| || ||||| || |||| |||||||| Sbjct: 2088 gcagcaaaactctttcttgaggtccttcaggattttattgtaactgaactc 2038 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Minus Query: 222 aaccatgaatcttgatgtgttccttctt 249 ||||||||||||| |||||||||||||| Sbjct: 2632 aaccatgaatctttatgtgttccttctt 2605
>emb|AJ718439.1| Nicotiana tabacum cDNA-AFLP-fragment BSTC1-12-240, cultivar Bright Yellow 2 Length = 188 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 217 tcagaaaccatgaatcttgatgtgttccttcttcacaatgcccgcctggacaag 270 ||||||||||||||| |||||||| || |||||||| || | ||||||||||| Sbjct: 94 tcagaaaccatgaattttgatgtgctctttcttcacgatttcagcctggacaag 41
>ref|XM_687061.1| PREDICTED: Danio rerio similar to beta-catenin 2 (LOC563701), mRNA Length = 3471 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Minus Query: 371 gcagctgcaccagcgtccccagca 394 |||||||||||||||||||||||| Sbjct: 1321 gcagctgcaccagcgtccccagca 1298
>gb|BC056276.1| Danio rerio catenin, beta 2, mRNA (cDNA clone MGC:65770 IMAGE:6789078), complete cds Length = 3600 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Minus Query: 371 gcagctgcaccagcgtccccagca 394 |||||||||||||||||||||||| Sbjct: 1386 gcagctgcaccagcgtccccagca 1363
>emb|AJ309088.1|PPI309088 Pinus pinaster partial mRNA for putative translation factor Length = 635 Score = 46.1 bits (23), Expect = 0.11 Identities = 44/51 (86%) Strand = Plus / Minus Query: 423 caaaactctttcttgaggtctttgaggatcttgctgtagctgaactccttc 473 ||||| ||||| |||||||||||||| || ||| ||||||| || |||||| Sbjct: 397 caaaattcttttttgaggtctttgagaattttgttgtagctaaattccttc 347
>gb|AF521961.1| Helianthus annuus translation initiation factor B04 mRNA, complete cds Length = 621 Score = 46.1 bits (23), Expect = 0.11 Identities = 53/63 (84%) Strand = Plus / Minus Query: 420 cagcaaaactctttcttgaggtctttgaggatcttgctgtagctgaactccttcttcaga 479 ||||| || ||||||||||| |||||||| || || |||||||| |||||| |||||| Sbjct: 296 cagcagaattctttcttgagatctttgagaattttatcgtagctgagctcctttttcaga 237 Query: 480 ccc 482 ||| Sbjct: 236 ccc 234
>ref|XM_475493.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 348 Score = 44.1 bits (22), Expect = 0.42 Identities = 31/34 (91%) Strand = Plus / Minus Query: 332 cgctgctggatgcgtacatgcacgtagtcctttg 365 |||||||||||||| |||||||| || ||||||| Sbjct: 119 cgctgctggatgcgcacatgcacataatcctttg 86 Score = 42.1 bits (21), Expect = 1.6 Identities = 48/57 (84%) Strand = Plus / Minus Query: 419 gcagcaaaactctttcttgaggtctttgaggatcttgctgtagctgaactccttctt 475 |||||| ||||| || || || || |||||||||||| |||| ||| |||||||||| Sbjct: 213 gcagcagaactcctttttcagatccttgaggatcttgttgtaactgtactccttctt 157
>ref|XM_959252.1| Neurospora crassa OR74A hypothetical protein (NCU01981.1) partial mRNA Length = 510 Score = 44.1 bits (22), Expect = 0.42 Identities = 37/42 (88%) Strand = Plus / Minus Query: 298 accctggacagtggtcaggctcttgcgaccattacgctgctg 339 ||||||||| || |||| | ||||||| |||||||||||||| Sbjct: 300 accctggacggtagtcaaggtcttgcgtccattacgctgctg 259
>ref|XM_329170.1| Neurospora crassa OR74A hypothetical protein (NCU01981.1) partial mRNA Length = 510 Score = 44.1 bits (22), Expect = 0.42 Identities = 37/42 (88%) Strand = Plus / Minus Query: 298 accctggacagtggtcaggctcttgcgaccattacgctgctg 339 ||||||||| || |||| | ||||||| |||||||||||||| Sbjct: 300 accctggacggtagtcaaggtcttgcgtccattacgctgctg 259
>gb|AC130605.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0010D04, complete sequence Length = 122599 Score = 44.1 bits (22), Expect = 0.42 Identities = 31/34 (91%) Strand = Plus / Minus Query: 332 cgctgctggatgcgtacatgcacgtagtcctttg 365 |||||||||||||| |||||||| || ||||||| Sbjct: 79823 cgctgctggatgcgcacatgcacataatcctttg 79790 Score = 42.1 bits (21), Expect = 1.6 Identities = 48/57 (84%) Strand = Plus / Minus Query: 419 gcagcaaaactctttcttgaggtctttgaggatcttgctgtagctgaactccttctt 475 |||||| ||||| || || || || |||||||||||| |||| ||| |||||||||| Sbjct: 79917 gcagcagaactcctttttcagatccttgaggatcttgttgtaactgtactccttctt 79861
>ref|XM_389056.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG08880.1) partial mRNA Length = 588 Score = 44.1 bits (22), Expect = 0.42 Identities = 43/50 (86%) Strand = Plus / Minus Query: 298 accctggacagtggtcaggctcttgcgaccattacgctgctggatgcgta 347 |||||| |||||||||| |||| || |||||||||||||| ||||||| Sbjct: 384 accctgaacagtggtcaaagtcttacgtccattacgctgctgaatgcgta 335
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.42 Identities = 31/34 (91%) Strand = Plus / Minus Query: 332 cgctgctggatgcgtacatgcacgtagtcctttg 365 |||||||||||||| |||||||| || ||||||| Sbjct: 24394033 cgctgctggatgcgcacatgcacataatcctttg 24394000 Score = 42.1 bits (21), Expect = 1.6 Identities = 48/57 (84%) Strand = Plus / Minus Query: 419 gcagcaaaactctttcttgaggtctttgaggatcttgctgtagctgaactccttctt 475 |||||| ||||| || || || || |||||||||||| |||| ||| |||||||||| Sbjct: 24394127 gcagcagaactcctttttcagatccttgaggatcttgttgtaactgtactccttctt 24394071
>dbj|AK070301.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049M22, full insert sequence Length = 1410 Score = 44.1 bits (22), Expect = 0.42 Identities = 31/34 (91%) Strand = Plus / Minus Query: 332 cgctgctggatgcgtacatgcacgtagtcctttg 365 |||||||||||||| |||||||| || ||||||| Sbjct: 956 cgctgctggatgcgcacatgcacataatcctttg 923 Score = 42.1 bits (21), Expect = 1.6 Identities = 48/57 (84%) Strand = Plus / Minus Query: 419 gcagcaaaactctttcttgaggtctttgaggatcttgctgtagctgaactccttctt 475 |||||| ||||| || || || || |||||||||||| |||| ||| |||||||||| Sbjct: 1050 gcagcagaactcctttttcagatccttgaggatcttgttgtaactgtactccttctt 994
>gb|AC005287.4| Arabidopsis thaliana chromosome I BAC F20D21 genomic sequence, complete sequence Length = 143186 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 299 ccctggacagtggtcaggctcttgcgaccattacgctgctg 339 ||||||||||| |||| ||| || | ||||||||||||||| Sbjct: 40595 ccctggacagttgtcaagctttttctaccattacgctgctg 40635 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 acgttcttcctctgatcacc 300 |||||||||||||||||||| Sbjct: 40382 acgttcttcctctgatcacc 40401
>ref|XM_967678.1| PREDICTED: Tribolium castaneum similar to Protein translation factor SUI1 homolog (LOC661525), mRNA Length = 821 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Minus Query: 302 tggacagtggtcaggctcttgcgaccattacgctgctggat 342 ||||||||||| || ||||||||||||| || |||||||| Sbjct: 240 tggacagtggttagagtcttgcgaccatttcgttgctggat 200
>emb|AL035065.1|SPBC23G7 S.pombe chromosome II cosmid c23G7 Length = 35694 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 219 agaaaccatgaatcttgatgt 239 ||||||||||||||||||||| Sbjct: 11952 agaaaccatgaatcttgatgt 11932
>ref|NM_001021768.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPBC23G7.05), partial mRNA Length = 330 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 219 agaaaccatgaatcttgatgt 239 ||||||||||||||||||||| Sbjct: 328 agaaaccatgaatcttgatgt 308
>dbj|AK058219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-F05, full insert sequence Length = 731 Score = 42.1 bits (21), Expect = 1.6 Identities = 48/57 (84%) Strand = Plus / Minus Query: 419 gcagcaaaactctttcttgaggtctttgaggatcttgctgtagctgaactccttctt 475 |||||| ||||| || || || || |||||||||||| |||| ||| |||||||||| Sbjct: 371 gcagcagaactcctttttcagatccttgaggatcttgttgtaactgtactccttctt 315
>gb|AF091857.1|AF091857 Pimpinella brachycarpa protein translation factor SUI1 homolog mRNA, complete cds Length = 533 Score = 42.1 bits (21), Expect = 1.6 Identities = 54/65 (83%) Strand = Plus / Minus Query: 233 ttgatgtgttccttcttcacaatgcccgcctggacaaggaagtttgagacgttcttcctc 292 ||||| || |||||||| ||||| || |||||||||| ||| | ||||||||||| | | Sbjct: 373 ttgatctgatccttcttgacaatcccagcctggacaatgaaagtggagacgttcttgcgc 314 Query: 293 tgatc 297 ||||| Sbjct: 313 tgatc 309
>dbj|AB001574.1| Schizosaccharomyces pombe DNA for SUI1 homologue, complete cds Length = 1904 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 219 agaaaccatgaatcttgatgt 239 ||||||||||||||||||||| Sbjct: 996 agaaaccatgaatcttgatgt 976
>gb|AY441361.1| Armigeres subalbatus ASAP ID: 39747 translation initiation factor mRNA sequence Length = 747 Score = 40.1 bits (20), Expect = 6.5 Identities = 38/44 (86%) Strand = Plus / Minus Query: 299 ccctggacagtggtcaggctcttgcgaccattacgctgctggat 342 |||||||||||||| || | ||||||||||| | ||||||||| Sbjct: 351 ccctggacagtggttagtgttttgcgaccatttctctgctggat 308
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 432 ttcttgaggtctttgaggat 451 |||||||||||||||||||| Sbjct: 659489 ttcttgaggtctttgaggat 659470
>gb|AC166256.5| Mus musculus BAC RP23-440F21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 181903 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 tcaccctggacagtggtcag 315 |||||||||||||||||||| Sbjct: 88214 tcaccctggacagtggtcag 88233
>emb|Z82081.1|CEW09H1 Caenorhabditis elegans Cosmid W09H1, complete sequence Length = 30827 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 ccccagcattcgcctcggca 406 |||||||||||||||||||| Sbjct: 6873 ccccagcattcgcctcggca 6854
>gb|AY232164.1| Drosophila yakuba clone yak-ad_CG17737 mRNA sequence Length = 330 Score = 40.1 bits (20), Expect = 6.5 Identities = 38/44 (86%) Strand = Plus / Minus Query: 299 ccctggacagtggtcaggctcttgcgaccattacgctgctggat 342 |||||||||||||| || |||||||||| || | ||||||||| Sbjct: 137 ccctggacagtggttagcgtcttgcgaccgttcctctgctggat 94
>ref|NM_001001889.1| Danio rerio catenin, beta 2 (ctnnb2), mRNA Length = 3550 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 371 gcagctgcaccagcgtccccagca 394 |||||||||||||||| ||||||| Sbjct: 1389 gcagctgcaccagcgtgcccagca 1366
>emb|AL109920.15|HSDJ335E1 Human DNA sequence from clone RP3-335E1 on chromosome 6q16.2-21 Contains a CpG island, complete sequence Length = 143805 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 aaaccatgaatcttgatgtg 240 |||||||||||||||||||| Sbjct: 62976 aaaccatgaatcttgatgtg 62957
>gb|DQ144993.1| Homo sapiens macrophage scavenger receptor 1 (MSR1) gene, complete cds Length = 88838 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 aggatcttgctgtagctgaa 466 |||||||||||||||||||| Sbjct: 44116 aggatcttgctgtagctgaa 44097
>emb|BX927149.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5, complete genome; segment 2/10 Length = 349887 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 gtttgagacgttcttcctct 293 |||||||||||||||||||| Sbjct: 123167 gtttgagacgttcttcctct 123186
>gb|BC114257.1| Danio rerio cDNA clone IMAGE:7993163, partial cds Length = 2315 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 371 gcagctgcaccagcgtccccagca 394 |||||||||||||||| ||||||| Sbjct: 138 gcagctgcaccagcgtgcccagca 115
>gb|AF329680.1| Danio rerio beta-catenin 2 mRNA, complete cds Length = 3550 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 371 gcagctgcaccagcgtccccagca 394 |||||||||||||||| ||||||| Sbjct: 1389 gcagctgcaccagcgtgcccagca 1366
>gb|AC097725.2| Drosophila melanogaster 3L BAC RP98-48E19 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 176521 Score = 40.1 bits (20), Expect = 6.5 Identities = 38/44 (86%) Strand = Plus / Minus Query: 299 ccctggacagtggtcaggctcttgcgaccattacgctgctggat 342 |||||||||||||| || |||||||||| || | ||||||||| Sbjct: 166877 ccctggacagtggttagcgtcttgcgaccgttcctctgctggat 166834
>ref|NM_139535.2| Drosophila melanogaster CG17737-RA (CG17737), mRNA Length = 726 Score = 40.1 bits (20), Expect = 6.5 Identities = 38/44 (86%) Strand = Plus / Minus Query: 299 ccctggacagtggtcaggctcttgcgaccattacgctgctggat 342 |||||||||||||| || |||||||||| || | ||||||||| Sbjct: 286 ccctggacagtggttagcgtcttgcgaccgttcctctgctggat 243
>gb|AY095068.1| Drosophila melanogaster RE14985 full insert cDNA Length = 688 Score = 40.1 bits (20), Expect = 6.5 Identities = 38/44 (86%) Strand = Plus / Minus Query: 299 ccctggacagtggtcaggctcttgcgaccattacgctgctggat 342 |||||||||||||| || |||||||||| || | ||||||||| Sbjct: 286 ccctggacagtggttagcgtcttgcgaccgttcctctgctggat 243
>gb|AC023396.4| Homo sapiens chromosome 8, clone RP11-545M21, complete sequence Length = 165770 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 aggatcttgctgtagctgaa 466 |||||||||||||||||||| Sbjct: 53049 aggatcttgctgtagctgaa 53030
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 tcttcctctgatcaccctgg 304 |||||||||||||||||||| Sbjct: 3620667 tcttcctctgatcaccctgg 3620686
>ref|NM_001027231.1| Caenorhabditis elegans W09H1.1a (W09H1.1) mRNA, complete cds Length = 1222 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 ccccagcattcgcctcggca 406 |||||||||||||||||||| Sbjct: 990 ccccagcattcgcctcggca 1009
>ref|NM_001027232.1| Caenorhabditis elegans W09H1.1b (W09H1.1) mRNA, complete cds Length = 1279 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 ccccagcattcgcctcggca 406 |||||||||||||||||||| Sbjct: 956 ccccagcattcgcctcggca 975
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 444 ttgaggatcttgctgtagctgaactcct 471 |||||||||||| |||| |||||||||| Sbjct: 2841016 ttgaggatcttgttgtaactgaactcct 2841043
>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome Length = 3309401 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 gtttgagacgttcttcctct 293 |||||||||||||||||||| Sbjct: 471189 gtttgagacgttcttcctct 471208
>dbj|AP005412.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0050G13 Length = 150685 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 444 ttgaggatcttgctgtagctgaactcct 471 |||||||||||| |||| |||||||||| Sbjct: 109244 ttgaggatcttgttgtaactgaactcct 109271
>gb|AE003477.3| Drosophila melanogaster chromosome 3L, section 11 of 83 of the complete sequence Length = 297894 Score = 40.1 bits (20), Expect = 6.5 Identities = 38/44 (86%) Strand = Plus / Minus Query: 299 ccctggacagtggtcaggctcttgcgaccattacgctgctggat 342 |||||||||||||| || |||||||||| || | ||||||||| Sbjct: 152999 ccctggacagtggttagcgtcttgcgaccgttcctctgctggat 152956
>gb|AE000512.1| Thermotoga maritima MSB8, complete genome Length = 1860725 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 agcaaaactctttcttgagg 440 |||||||||||||||||||| Sbjct: 430718 agcaaaactctttcttgagg 430737
>gb|AC116952.4| Mus musculus BAC clone RP23-104A7 from 14, complete sequence Length = 210088 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 405 caaaggggtcaaaggcagca 424 |||||||||||||||||||| Sbjct: 89599 caaaggggtcaaaggcagca 89618 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,970,942 Number of Sequences: 3902068 Number of extensions: 3970942 Number of successful extensions: 72372 Number of sequences better than 10.0: 90 Number of HSP's better than 10.0 without gapping: 90 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 72057 Number of HSP's gapped (non-prelim): 310 length of query: 482 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 460 effective length of database: 17,147,199,772 effective search space: 7887711895120 effective search space used: 7887711895120 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)