>PEVR2_MOUSE (Q9D8F3) Porcine endogenous retrovirus A receptor 2 homolog|
           precursor (PERV-A receptor 2 homolog) (Protein GPR172B)
          Length = 450

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
 Frame = -1

Query: 299 ITGTIFPPDPQATQLRSCKVERRRCGQALMINQNTLYESSALAVKQLSSVQFSSILHSXS 120
           + G +  PDP+A QL S    R  C   L+   N L      AV+  S + +  + +  +
Sbjct: 262 VAGIVSSPDPKAHQLFS---SRSACLLGLLAITNALTNGVLPAVQSFSCLPYGRLAYHLA 318

Query: 119 LVYMYCA--LSSFLPFCPL 69
           +V   CA  L+ FL    L
Sbjct: 319 VVLGSCANPLACFLAMAVL 337

>CYB_LACMU (P92853) Cytochrome b (Fragment)|
          Length = 214

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = -2

Query: 421 KPNVQERELALFNIVCDELLLGIPRFAWW-VGIAAVICLVLASLAPYFLPIHKLLN 257
           K  + +  L LFN+    L +G     WW  G   +ICL++ +   +FL IH   N
Sbjct: 5   KNMLHQHMLTLFNL----LPVGSNISTWWNFGSMLLICLMIQTTTGFFLAIHYTAN 56

>NUOM_MYCTU (O53307) NADH-quinone oxidoreductase chain M (EC 1.6.99.5) (NADH|
           dehydrogenase I, chain M) (NDH-1, chain M)
          Length = 553

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 23/89 (25%), Positives = 33/89 (37%)
 Frame = -1

Query: 353 PSLCLVGWNCSSDLPCVGITGTIFPPDPQATQLRSCKVERRRCGQALMINQNTLYESSAL 174
           P L + GWN ++D   +      +P  P   +LRS   ER R G    +      ES  L
Sbjct: 97  PLLLVAGWNDATDADDLSPASGRYPQRPAPPRLRSSGGERTR-GVHAYVALTLAIESMVL 155

Query: 173 AVKQLSSVQFSSILHSXSLVYMYCALSSF 87
                  V    +     L+ MY  +  F
Sbjct: 156 MSVIALDVLLFYVFFEAMLIPMYFLIGGF 184

>ABGT_ECOLI (P46133) Aminobenzoyl-glutamate transport protein|
          Length = 510

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 7/55 (12%)
 Frame = -2

Query: 397 LALFNIVCDELLLGIPRFAWWVGIAAVICLVLAS-------LAPYFLPIHKLLNY 254
           + L +I+    L GIP F     +++ +C+ +AS       LAP F+P+  LL +
Sbjct: 373 VGLTDILESSGLSGIPAFVGLALLSSFLCMFIASGSAIWSILAPIFVPMFMLLGF 427

>GPD1_PICJA (Q6ZZF4) Glycerol-3-phosphate dehydrogenase [NAD+] 1 (EC 1.1.1.8)|
          Length = 393

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = +3

Query: 336 HQAKRGIPSKSSSHTMLNRASSLSCTFGFATTPSGSTVTRTY 461
           HQ   GI  + S  T+     ++SC  G   TP+G  +  TY
Sbjct: 131 HQFLPGICKQLSKATLKPHVRAISCLKGLEVTPNGCKLLSTY 172

>ACOX2_CUCMA (O64894) Acyl-coenzyme A oxidase, peroxisomal precursor (EC|
           1.3.3.6) (AOX) (Long-chain acyl-CoA oxidase)
          Length = 690

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
 Frame = -2

Query: 394 ALFNIVCDELLLGIPR---FAWWVGIAAVICLVLASLAPYFLPIH 269
           A F+ + DE ++  P      WW+G AAV        A   LP H
Sbjct: 199 ATFDPITDEFIINTPNDGAIKWWIGNAAVHGKFATVFAKLVLPTH 243

>YPBQ_BACSU (P54158) Hypothetical protein ypbQ|
          Length = 168

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 7/46 (15%)
 Frame = -2

Query: 397 LALFNIVCDELLLGIPRFAWWVGIAAVICLV-------LASLAPYF 281
           L   +++ + LL+     +WW+GIAAVI  V       L SL  Y+
Sbjct: 49  LFFLSLIAEVLLMNKQPSSWWLGIAAVILSVQIVRYWALCSLGAYW 94

>CYB_ELASE (P87416) Cytochrome b (Fragment)|
          Length = 214

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = -2

Query: 340 WW-VGIAAVICLVLASLAPYFLPIHKLLN 257
           WW  G   +ICL+L +L  +FL IH   N
Sbjct: 28  WWNFGSMLLICLMLQTLTGFFLAIHYTAN 56

>MPRI_BOVIN (P08169) Cation-independent mannose-6-phosphate receptor precursor|
            (CI Man-6-P receptor) (CI-MPR) (M6PR) (Insulin-like
            growth factor 2 receptor) (Insulin-like growth factor II
            receptor) (IGF-II receptor) (300 kDa mannose 6-phosphate
            receptor)
          Length = 2499

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 17/79 (21%), Positives = 32/79 (40%), Gaps = 3/79 (3%)
 Frame = -1

Query: 308  CVGITGTIFPPDPQATQLRSCKVERRRCG---QALMINQNTLYESSALAVKQLSSVQFSS 138
            C  +T  + P   ++  + SC+ +R   G    A + NQ   YE+  L +          
Sbjct: 1271 CGELTSGVCPTSDKSKVISSCQEKRGPQGFQKVAGLFNQKLTYENGVLKMNYTGGDTCHK 1330

Query: 137  ILHSXSLVYMYCALSSFLP 81
            +    + ++ YC  S+  P
Sbjct: 1331 VYQRSTTIFFYCDRSTQAP 1349


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,934,072
Number of Sequences: 219361
Number of extensions: 1164792
Number of successful extensions: 3488
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3487
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3014947676
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)