Clone Name | rbasd26i18 |
---|---|
Clone Library Name | barley_pub |
>PLMN_HUMAN (P00747) Plasminogen precursor (EC 3.4.21.7) [Contains: Plasmin| heavy chain A; Activation peptide; Angiostatin; Plasmin heavy chain A, short form; Plasmin light chain B] Length = 810 Score = 30.4 bits (67), Expect = 1.8 Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 2/37 (5%) Frame = -2 Query: 161 GEVVTRFP*VNLRKDHCRDPDQN-RP-CSRHPILRRW 57 G + ++FP NL+K++CR+PD+ RP C +RW Sbjct: 218 GYIPSKFPNKNLKKNYCRNPDRELRPWCFTTDPNKRW 254
>PLMN_MACMU (P12545) Plasminogen precursor (EC 3.4.21.7) [Contains: Plasmin| heavy chain A; Activation peptide; Plasmin heavy chain A, short form; Plasmin light chain B] Length = 810 Score = 30.0 bits (66), Expect = 2.3 Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 2/37 (5%) Frame = -2 Query: 161 GEVVTRFP*VNLRKDHCRDPD-QNRP-CSRHPILRRW 57 G + ++FP NL+K++CR+PD + RP C +RW Sbjct: 218 GYIPSKFPNKNLKKNYCRNPDGEPRPWCFTTDPNKRW 254
>TRPG_CAEEL (Q93971) Transient receptor potential channel (Abnormal gonad| development protein 2) Length = 2032 Score = 30.0 bits (66), Expect = 2.3 Identities = 17/39 (43%), Positives = 21/39 (53%) Frame = +1 Query: 211 RTAPVAAIRTLHRTIQSVGATGGVYKGQGRSQRELMTRA 327 RTAP+ R HR +S TGGVY +G R L+ A Sbjct: 124 RTAPIKKTRK-HRRRRSGSFTGGVYPRKGHRNRSLLGHA 161
>PLMN_MOUSE (P20918) Plasminogen precursor (EC 3.4.21.7) [Contains: Plasmin| heavy chain A; Activation peptide; Angiostatin; Plasmin heavy chain A, short form; Plasmin light chain B] Length = 812 Score = 28.1 bits (61), Expect = 8.8 Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 2/37 (5%) Frame = -2 Query: 161 GEVVTRFP*VNLRKDHCRDPD-QNRP-CSRHPILRRW 57 G + +FP NL+ ++CR+PD + RP C +RW Sbjct: 218 GYIPAKFPSKNLKMNYCRNPDGEPRPWCFTTDPTKRW 254
>PLMN_BOVIN (P06868) Plasminogen precursor (EC 3.4.21.7) [Contains: Plasmin| heavy chain A; Activation peptide; Plasmin heavy chain A, short form; Plasmin light chain B] Length = 812 Score = 28.1 bits (61), Expect = 8.8 Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%) Frame = -2 Query: 161 GEVVTRFP*VNLRKDHCRDPD-QNRP-CSRHPILRRW 57 G + ++FP NL+ ++CR+PD + RP C +RW Sbjct: 225 GYIPSKFPNKNLKMNYCRNPDGEPRPWCFTTDPQKRW 261 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,540,407 Number of Sequences: 219361 Number of extensions: 1116956 Number of successful extensions: 2489 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 2421 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2489 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2286875994 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)