ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd26i11 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 281 bits (142), Expect = 1e-72 Identities = 190/206 (92%) Strand = Plus / Minus Query: 185 gtggtgatgtgcacgccgatgacgatgacaaagagagcgatgagggcgaagtagatgatg 244 ||||||||||| || |||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 162326 gtggtgatgtgtactccgatgacgatgacaaagagggtgatgagggcgaagtagatgatg 162267 Query: 245 gcgtggacgaggatggccatggcgctggtgtgcatgttgccgaactccacgaagtggtgc 304 | |||||||| ||||| ||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 162266 gagtggacgacgatggacatggcgctggtgtgcaggttgccgaactcgacgaagtggtgc 162207 Query: 305 ttcccggggagctgcagcagcagccccggggacagcagcacgaacagcaccaccgcgatc 364 ||||||||||||| | ||||||||||| || ||||||||||||||||||||||||||| Sbjct: 162206 ctcccggggagctggatgagcagccccggcgagagcagcacgaacagcaccaccgcgatc 162147 Query: 365 accaccggcccccagtccgacatcct 390 ||||||||||||||||| |||||||| Sbjct: 162146 accaccggcccccagtctgacatcct 162121 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Minus Query: 226 gagggcgaagtagatgatggcgtggacgaggatgg 260 |||||||||| ||| ||||| |||||||||||||| Sbjct: 158704 gagggcgaagaagaggatggtgtggacgaggatgg 158670 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 410 tcttctccgacgccggcgac 429 |||||||||||||||||||| Sbjct: 10876521 tcttctccgacgccggcgac 10876502
>dbj|AK066339.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013062F19, full insert sequence Length = 641 Score = 281 bits (142), Expect = 1e-72 Identities = 190/206 (92%) Strand = Plus / Minus Query: 185 gtggtgatgtgcacgccgatgacgatgacaaagagagcgatgagggcgaagtagatgatg 244 ||||||||||| || |||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 385 gtggtgatgtgtactccgatgacgatgacaaagagggtgatgagggcgaagtagatgatg 326 Query: 245 gcgtggacgaggatggccatggcgctggtgtgcatgttgccgaactccacgaagtggtgc 304 | |||||||| ||||| ||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 325 gagtggacgacgatggacatggcgctggtgtgcaggttgccgaactcgacgaagtggtgc 266 Query: 305 ttcccggggagctgcagcagcagccccggggacagcagcacgaacagcaccaccgcgatc 364 ||||||||||||| | ||||||||||| || ||||||||||||||||||||||||||| Sbjct: 265 ctcccggggagctggatgagcagccccggcgagagcagcacgaacagcaccaccgcgatc 206 Query: 365 accaccggcccccagtccgacatcct 390 ||||||||||||||||| |||||||| Sbjct: 205 accaccggcccccagtctgacatcct 180
>gb|AC084818.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0668H12, complete sequence Length = 160603 Score = 281 bits (142), Expect = 1e-72 Identities = 190/206 (92%) Strand = Plus / Minus Query: 185 gtggtgatgtgcacgccgatgacgatgacaaagagagcgatgagggcgaagtagatgatg 244 ||||||||||| || |||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 44510 gtggtgatgtgtactccgatgacgatgacaaagagggtgatgagggcgaagtagatgatg 44451 Query: 245 gcgtggacgaggatggccatggcgctggtgtgcatgttgccgaactccacgaagtggtgc 304 | |||||||| ||||| ||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 44450 gagtggacgacgatggacatggcgctggtgtgcaggttgccgaactcgacgaagtggtgc 44391 Query: 305 ttcccggggagctgcagcagcagccccggggacagcagcacgaacagcaccaccgcgatc 364 ||||||||||||| | ||||||||||| || ||||||||||||||||||||||||||| Sbjct: 44390 ctcccggggagctggatgagcagccccggcgagagcagcacgaacagcaccaccgcgatc 44331 Query: 365 accaccggcccccagtccgacatcct 390 ||||||||||||||||| |||||||| Sbjct: 44330 accaccggcccccagtctgacatcct 44305 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Minus Query: 226 gagggcgaagtagatgatggcgtggacgaggatgg 260 |||||||||| ||| ||||| |||||||||||||| Sbjct: 40888 gagggcgaagaagaggatggtgtggacgaggatgg 40854
>ref|XM_475057.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 210 Score = 276 bits (139), Expect = 6e-71 Identities = 187/203 (92%) Strand = Plus / Minus Query: 185 gtggtgatgtgcacgccgatgacgatgacaaagagagcgatgagggcgaagtagatgatg 244 ||||||||||| || |||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 203 gtggtgatgtgtactccgatgacgatgacaaagagggtgatgagggcgaagtagatgatg 144 Query: 245 gcgtggacgaggatggccatggcgctggtgtgcatgttgccgaactccacgaagtggtgc 304 | |||||||| ||||| ||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 143 gagtggacgacgatggacatggcgctggtgtgcaggttgccgaactcgacgaagtggtgc 84 Query: 305 ttcccggggagctgcagcagcagccccggggacagcagcacgaacagcaccaccgcgatc 364 ||||||||||||| | ||||||||||| || ||||||||||||||||||||||||||| Sbjct: 83 ctcccggggagctggatgagcagccccggcgagagcagcacgaacagcaccaccgcgatc 24 Query: 365 accaccggcccccagtccgacat 387 ||||||||||||||||| ||||| Sbjct: 23 accaccggcccccagtctgacat 1
>ref|XM_506811.1| PREDICTED Oryza sativa (japonica cultivar-group), P0047E05.40 mRNA Length = 537 Score = 125 bits (63), Expect = 1e-25 Identities = 165/199 (82%) Strand = Plus / Minus Query: 190 gatgtgcacgccgatgacgatgacaaagagagcgatgagggcgaagtagatgatggcgtg 249 |||||| ||||||||| |||||| |||| | |||||||||||||||||||| |||||| Sbjct: 308 gatgtggacgccgatggcgatgaggaagatggtgatgagggcgaagtagatgacggcgtg 249 Query: 250 gacgaggatggccatggcgctggtgtgcatgttgccgaactccacgaagtggtgcttccc 309 |||||||| ||| | | |||||||||||||| ||||||| |||||| || | | | Sbjct: 248 gacgaggacggcgacgccgctggtgtgcatggtgccgaagcccacgatccggccgtgcgc 189 Query: 310 ggggagctgcagcagcagccccggggacagcagcacgaacagcaccaccgcgatcaccac 369 || ||||| | |||||||||||| | |||||||||||||||||| |||||||||||| Sbjct: 188 cggcagctggaacagcagccccggcgtgagcagcacgaacagcaccgtcgcgatcaccac 129 Query: 370 cggcccccagtccgacatc 388 ||||||||| |||| |||| Sbjct: 128 cggcccccaatccgccatc 110
>ref|XM_465906.1| Oryza sativa (japonica cultivar-group), mRNA Length = 521 Score = 125 bits (63), Expect = 1e-25 Identities = 165/199 (82%) Strand = Plus / Minus Query: 190 gatgtgcacgccgatgacgatgacaaagagagcgatgagggcgaagtagatgatggcgtg 249 |||||| ||||||||| |||||| |||| | |||||||||||||||||||| |||||| Sbjct: 287 gatgtggacgccgatggcgatgaggaagatggtgatgagggcgaagtagatgacggcgtg 228 Query: 250 gacgaggatggccatggcgctggtgtgcatgttgccgaactccacgaagtggtgcttccc 309 |||||||| ||| | | |||||||||||||| ||||||| |||||| || | | | Sbjct: 227 gacgaggacggcgacgccgctggtgtgcatggtgccgaagcccacgatccggccgtgcgc 168 Query: 310 ggggagctgcagcagcagccccggggacagcagcacgaacagcaccaccgcgatcaccac 369 || ||||| | |||||||||||| | |||||||||||||||||| |||||||||||| Sbjct: 167 cggcagctggaacagcagccccggcgtgagcagcacgaacagcaccgtcgcgatcaccac 108 Query: 370 cggcccccagtccgacatc 388 ||||||||| |||| |||| Sbjct: 107 cggcccccaatccgccatc 89
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 125 bits (63), Expect = 1e-25 Identities = 165/199 (82%) Strand = Plus / Plus Query: 190 gatgtgcacgccgatgacgatgacaaagagagcgatgagggcgaagtagatgatggcgtg 249 |||||| ||||||||| |||||| |||| | |||||||||||||||||||| |||||| Sbjct: 18245550 gatgtggacgccgatggcgatgaggaagatggtgatgagggcgaagtagatgacggcgtg 18245609 Query: 250 gacgaggatggccatggcgctggtgtgcatgttgccgaactccacgaagtggtgcttccc 309 |||||||| ||| | | |||||||||||||| ||||||| |||||| || | | | Sbjct: 18245610 gacgaggacggcgacgccgctggtgtgcatggtgccgaagcccacgatccggccgtgcgc 18245669 Query: 310 ggggagctgcagcagcagccccggggacagcagcacgaacagcaccaccgcgatcaccac 369 || ||||| | |||||||||||| | |||||||||||||||||| |||||||||||| Sbjct: 18245670 cggcagctggaacagcagccccggcgtgagcagcacgaacagcaccgtcgcgatcaccac 18245729 Query: 370 cggcccccagtccgacatc 388 ||||||||| |||| |||| Sbjct: 18245730 cggcccccaatccgccatc 18245748 Score = 103 bits (52), Expect = 5e-19 Identities = 133/160 (83%) Strand = Plus / Minus Query: 229 ggcgaagtagatgatggcgtggacgaggatggccatggcgctggtgtgcatgttgccgaa 288 ||||||| |||||| || |||||||| ||||||| || || ||||| | | | ||||||| Sbjct: 18311474 ggcgaagaagatgagggtgtggacgaagatggccttgccgttggtgcggaagctgccgaa 18311415 Query: 289 ctccacgaagtggtgcttcccggggagctgcagcagcagccccggggacagcagcacgaa 348 || ||| | ||||| | |||||||||| || |||||||||||| || ||||||||||| Sbjct: 18311414 gtcgacgtggcggtgcgtgccggggagctccaccagcagccccggcgagagcagcacgaa 18311355 Query: 349 cagcaccaccgcgatcaccaccggcccccagtccgacatc 388 |||||||||| | | |||||||||| ||||||||| |||| Sbjct: 18311354 cagcaccacccccaccaccaccggcgcccagtccgccatc 18311315 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Minus Query: 226 gagggcgaagtagatgatggcgtggacgaggatggccatggcgctggtgtgcatgttgcc 285 |||| ||||| ||| || |||||||||||||| || | | |||||||| ||||||||| Sbjct: 18281808 gaggacgaagaagaagacggcgtggacgaggacggagacgccgctggtgcacatgttgcc 18281749 Query: 286 gaactccac 294 ||||||||| Sbjct: 18281748 gaactccac 18281740
>dbj|AP005841.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0052M16 Length = 145423 Score = 125 bits (63), Expect = 1e-25 Identities = 165/199 (82%) Strand = Plus / Plus Query: 190 gatgtgcacgccgatgacgatgacaaagagagcgatgagggcgaagtagatgatggcgtg 249 |||||| ||||||||| |||||| |||| | |||||||||||||||||||| |||||| Sbjct: 46763 gatgtggacgccgatggcgatgaggaagatggtgatgagggcgaagtagatgacggcgtg 46822 Query: 250 gacgaggatggccatggcgctggtgtgcatgttgccgaactccacgaagtggtgcttccc 309 |||||||| ||| | | |||||||||||||| ||||||| |||||| || | | | Sbjct: 46823 gacgaggacggcgacgccgctggtgtgcatggtgccgaagcccacgatccggccgtgcgc 46882 Query: 310 ggggagctgcagcagcagccccggggacagcagcacgaacagcaccaccgcgatcaccac 369 || ||||| | |||||||||||| | |||||||||||||||||| |||||||||||| Sbjct: 46883 cggcagctggaacagcagccccggcgtgagcagcacgaacagcaccgtcgcgatcaccac 46942 Query: 370 cggcccccagtccgacatc 388 ||||||||| |||| |||| Sbjct: 46943 cggcccccaatccgccatc 46961 Score = 103 bits (52), Expect = 5e-19 Identities = 133/160 (83%) Strand = Plus / Minus Query: 229 ggcgaagtagatgatggcgtggacgaggatggccatggcgctggtgtgcatgttgccgaa 288 ||||||| |||||| || |||||||| ||||||| || || ||||| | | | ||||||| Sbjct: 112687 ggcgaagaagatgagggtgtggacgaagatggccttgccgttggtgcggaagctgccgaa 112628 Query: 289 ctccacgaagtggtgcttcccggggagctgcagcagcagccccggggacagcagcacgaa 348 || ||| | ||||| | |||||||||| || |||||||||||| || ||||||||||| Sbjct: 112627 gtcgacgtggcggtgcgtgccggggagctccaccagcagccccggcgagagcagcacgaa 112568 Query: 349 cagcaccaccgcgatcaccaccggcccccagtccgacatc 388 |||||||||| | | |||||||||| ||||||||| |||| Sbjct: 112567 cagcaccacccccaccaccaccggcgcccagtccgccatc 112528 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Minus Query: 226 gagggcgaagtagatgatggcgtggacgaggatggccatggcgctggtgtgcatgttgcc 285 |||| ||||| ||| || |||||||||||||| || | | |||||||| ||||||||| Sbjct: 83021 gaggacgaagaagaagacggcgtggacgaggacggagacgccgctggtgcacatgttgcc 82962 Query: 286 gaactccac 294 ||||||||| Sbjct: 82961 gaactccac 82953
>dbj|AP005066.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0047E05 Length = 184323 Score = 125 bits (63), Expect = 1e-25 Identities = 165/199 (82%) Strand = Plus / Plus Query: 190 gatgtgcacgccgatgacgatgacaaagagagcgatgagggcgaagtagatgatggcgtg 249 |||||| ||||||||| |||||| |||| | |||||||||||||||||||| |||||| Sbjct: 168951 gatgtggacgccgatggcgatgaggaagatggtgatgagggcgaagtagatgacggcgtg 169010 Query: 250 gacgaggatggccatggcgctggtgtgcatgttgccgaactccacgaagtggtgcttccc 309 |||||||| ||| | | |||||||||||||| ||||||| |||||| || | | | Sbjct: 169011 gacgaggacggcgacgccgctggtgtgcatggtgccgaagcccacgatccggccgtgcgc 169070 Query: 310 ggggagctgcagcagcagccccggggacagcagcacgaacagcaccaccgcgatcaccac 369 || ||||| | |||||||||||| | |||||||||||||||||| |||||||||||| Sbjct: 169071 cggcagctggaacagcagccccggcgtgagcagcacgaacagcaccgtcgcgatcaccac 169130 Query: 370 cggcccccagtccgacatc 388 ||||||||| |||| |||| Sbjct: 169131 cggcccccaatccgccatc 169149
>dbj|AK121771.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033092F10, full insert sequence Length = 538 Score = 125 bits (63), Expect = 1e-25 Identities = 165/199 (82%) Strand = Plus / Minus Query: 190 gatgtgcacgccgatgacgatgacaaagagagcgatgagggcgaagtagatgatggcgtg 249 |||||| ||||||||| |||||| |||| | |||||||||||||||||||| |||||| Sbjct: 309 gatgtggacgccgatggcgatgaggaagatggtgatgagggcgaagtagatgacggcgtg 250 Query: 250 gacgaggatggccatggcgctggtgtgcatgttgccgaactccacgaagtggtgcttccc 309 |||||||| ||| | | |||||||||||||| ||||||| |||||| || | | | Sbjct: 249 gacgaggacggcgacgccgctggtgtgcatggtgccgaagcccacgatccggccgtgcgc 190 Query: 310 ggggagctgcagcagcagccccggggacagcagcacgaacagcaccaccgcgatcaccac 369 || ||||| | |||||||||||| | |||||||||||||||||| |||||||||||| Sbjct: 189 cggcagctggaacagcagccccggcgtgagcagcacgaacagcaccgtcgcgatcaccac 130 Query: 370 cggcccccagtccgacatc 388 ||||||||| |||| |||| Sbjct: 129 cggcccccaatccgccatc 111
>dbj|AK063931.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-D03, full insert sequence Length = 530 Score = 125 bits (63), Expect = 1e-25 Identities = 165/199 (82%) Strand = Plus / Minus Query: 190 gatgtgcacgccgatgacgatgacaaagagagcgatgagggcgaagtagatgatggcgtg 249 |||||| ||||||||| |||||| |||| | |||||||||||||||||||| |||||| Sbjct: 285 gatgtggacgccgatggcgatgaggaagatggtgatgagggcgaagtagatgacggcgtg 226 Query: 250 gacgaggatggccatggcgctggtgtgcatgttgccgaactccacgaagtggtgcttccc 309 |||||||| ||| | | |||||||||||||| ||||||| |||||| || | | | Sbjct: 225 gacgaggacggcgacgccgctggtgtgcatggtgccgaagcccacgatccggccgtgcgc 166 Query: 310 ggggagctgcagcagcagccccggggacagcagcacgaacagcaccaccgcgatcaccac 369 || ||||| | |||||||||||| | |||||||||||||||||| |||||||||||| Sbjct: 165 cggcagctggaacagcagccccggcgtgagcagcacgaacagcaccgtcgcgatcaccac 106 Query: 370 cggcccccagtccgacatc 388 ||||||||| |||| |||| Sbjct: 105 cggcccccaatccgccatc 87
>dbj|AK105187.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-F09, full insert sequence Length = 492 Score = 103 bits (52), Expect = 5e-19 Identities = 133/160 (83%) Strand = Plus / Minus Query: 229 ggcgaagtagatgatggcgtggacgaggatggccatggcgctggtgtgcatgttgccgaa 288 ||||||| |||||| || |||||||| ||||||| || || ||||| | | | ||||||| Sbjct: 192 ggcgaagaagatgagggtgtggacgaagatggccttgccgttggtgcggaagctgccgaa 133 Query: 289 ctccacgaagtggtgcttcccggggagctgcagcagcagccccggggacagcagcacgaa 348 || ||| | ||||| | |||||||||| || |||||||||||| || ||||||||||| Sbjct: 132 gtcgacgtggcggtgcgtgccggggagctccaccagcagccccggcgagagcagcacgaa 73 Query: 349 cagcaccaccgcgatcaccaccggcccccagtccgacatc 388 |||||||||| | | |||||||||| ||||||||| |||| Sbjct: 72 cagcaccacccccaccaccaccggcgcccagtccgccatc 33
>gb|AC133608.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0085G12, complete sequence Length = 121470 Score = 95.6 bits (48), Expect = 1e-16 Identities = 138/168 (82%) Strand = Plus / Minus Query: 221 gcgatgagggcgaagtagatgatggcgtggacgaggatggccatggcgctggtgtgcatg 280 |||||||| |||||||||||||||| |||||||||||||| | | ||||||| || | | Sbjct: 99253 gcgatgagcgcgaagtagatgatggagtggacgaggatggagaggccgctggtctggaag 99194 Query: 281 ttgccgaactccacgaagtggtgcttcccggggagctgcagcagcagccccggggacagc 340 |||||||||||||||| |||||| |||| ||| | |||||||||||| |||||| Sbjct: 99193 ttgccgaactccacgatcctccccttccccgggatctggaacagcagccccggcgacagc 99134 Query: 341 agcacgaacagcaccaccgcgatcaccaccggcccccagtccgacatc 388 || | ||||||||||| | | || | |||||||||||| |||| |||| Sbjct: 99133 aggatgaacagcaccagccctatgaacaccggcccccaatccgccatc 99086
>gb|AC135569.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0018F17, complete sequence Length = 104291 Score = 95.6 bits (48), Expect = 1e-16 Identities = 138/168 (82%) Strand = Plus / Minus Query: 221 gcgatgagggcgaagtagatgatggcgtggacgaggatggccatggcgctggtgtgcatg 280 |||||||| |||||||||||||||| |||||||||||||| | | ||||||| || | | Sbjct: 5553 gcgatgagcgcgaagtagatgatggagtggacgaggatggagaggccgctggtctggaag 5494 Query: 281 ttgccgaactccacgaagtggtgcttcccggggagctgcagcagcagccccggggacagc 340 |||||||||||||||| |||||| |||| ||| | |||||||||||| |||||| Sbjct: 5493 ttgccgaactccacgatcctccccttccccgggatctggaacagcagccccggcgacagc 5434 Query: 341 agcacgaacagcaccaccgcgatcaccaccggcccccagtccgacatc 388 || | ||||||||||| | | || | |||||||||||| |||| |||| Sbjct: 5433 aggatgaacagcaccagccctatgaacaccggcccccaatccgccatc 5386
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 95.6 bits (48), Expect = 1e-16 Identities = 138/168 (82%) Strand = Plus / Minus Query: 221 gcgatgagggcgaagtagatgatggcgtggacgaggatggccatggcgctggtgtgcatg 280 |||||||| |||||||||||||||| |||||||||||||| | | ||||||| || | | Sbjct: 17031597 gcgatgagcgcgaagtagatgatggagtggacgaggatggagaggccgctggtctggaag 17031538 Query: 281 ttgccgaactccacgaagtggtgcttcccggggagctgcagcagcagccccggggacagc 340 |||||||||||||||| |||||| |||| ||| | |||||||||||| |||||| Sbjct: 17031537 ttgccgaactccacgatcctccccttccccgggatctggaacagcagccccggcgacagc 17031478 Query: 341 agcacgaacagcaccaccgcgatcaccaccggcccccagtccgacatc 388 || | ||||||||||| | | || | |||||||||||| |||| |||| Sbjct: 17031477 aggatgaacagcaccagccctatgaacaccggcccccaatccgccatc 17031430
>dbj|AK062973.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-109-E07, full insert sequence Length = 562 Score = 95.6 bits (48), Expect = 1e-16 Identities = 138/168 (82%) Strand = Plus / Minus Query: 221 gcgatgagggcgaagtagatgatggcgtggacgaggatggccatggcgctggtgtgcatg 280 |||||||| |||||||||||||||| |||||||||||||| | | ||||||| || | | Sbjct: 269 gcgatgagcgcgaagtagatgatggagtggacgaggatggagaggccgctggtctggaag 210 Query: 281 ttgccgaactccacgaagtggtgcttcccggggagctgcagcagcagccccggggacagc 340 |||||||||||||||| |||||| |||| ||| | |||||||||||| |||||| Sbjct: 209 ttgccgaactccacgatcctccccttccccgggatctggaacagcagccccggcgacagc 150 Query: 341 agcacgaacagcaccaccgcgatcaccaccggcccccagtccgacatc 388 || | ||||||||||| | | || | |||||||||||| |||| |||| Sbjct: 149 aggatgaacagcaccagccctatgaacaccggcccccaatccgccatc 102
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 95.6 bits (48), Expect = 1e-16 Identities = 138/168 (82%) Strand = Plus / Minus Query: 221 gcgatgagggcgaagtagatgatggcgtggacgaggatggccatggcgctggtgtgcatg 280 |||||||| |||||||||||||||| |||||||||||||| | | ||||||| || | | Sbjct: 17126298 gcgatgagcgcgaagtagatgatggagtggacgaggatggagaggccgctggtctggaag 17126239 Query: 281 ttgccgaactccacgaagtggtgcttcccggggagctgcagcagcagccccggggacagc 340 |||||||||||||||| |||||| |||| ||| | |||||||||||| |||||| Sbjct: 17126238 ttgccgaactccacgatcctccccttccccgggatctggaacagcagccccggcgacagc 17126179 Query: 341 agcacgaacagcaccaccgcgatcaccaccggcccccagtccgacatc 388 || | ||||||||||| | | || | |||||||||||| |||| |||| Sbjct: 17126178 aggatgaacagcaccagccctatgaacaccggcccccaatccgccatc 17126131
>gb|AY104142.1| Zea mays PCO087598 mRNA sequence Length = 630 Score = 89.7 bits (45), Expect = 7e-15 Identities = 63/69 (91%) Strand = Plus / Minus Query: 223 gatgagggcgaagtagatgatggcgtggacgaggatggccatggcgctggtgtgcatgtt 282 |||||| |||||||||| || |||||||||||||||||||| | |||||||||||||| | Sbjct: 282 gatgagcgcgaagtagaggacggcgtggacgaggatggccaggccgctggtgtgcatgct 223 Query: 283 gccgaactc 291 ||||||||| Sbjct: 222 gccgaactc 214
>gb|AY108687.1| Zea mays PCO149432 mRNA sequence Length = 666 Score = 85.7 bits (43), Expect = 1e-13 Identities = 133/163 (81%) Strand = Plus / Minus Query: 221 gcgatgagggcgaagtagatgatggcgtggacgaggatggccatggcgctggtgtgcatg 280 |||| ||||||||||||||||| |||||||| |||||||| | | ||||||| || | | Sbjct: 321 gcgaggagggcgaagtagatgacggcgtggatgaggatggagaggccgctggtctggaag 262 Query: 281 ttgccgaactccacgaagtggtgcttcccggggagctgcagcagcagccccggggacagc 340 ||||||||||| | || || ||| ||||||| ||| | ||||| |||||||| ||| Sbjct: 261 ttgccgaactcgatgatccggcccttgccggggatctggaagagcaggcccggggagagc 202 Query: 341 agcacgaacagcaccaccgcgatcaccaccggcccccagtccg 383 || | ||| ||||||| | |||||| ||||||||||||||||| Sbjct: 201 aggatgaagagcaccagcccgatcagcaccggcccccagtccg 159
>ref|XM_463643.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 228 Score = 77.8 bits (39), Expect = 3e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 232 gaagtagatgatggcgtggacgaggatggccatggcgctggtgtgcatgttgccgaactc 291 |||| |||||| |||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 174 gaagaagatgacggcgtggacgaggatggcgatggcgctggttgccatgttgccgaactc 115 Query: 292 cac 294 ||| Sbjct: 114 cac 112 Score = 46.1 bits (23), Expect = 0.10 Identities = 35/39 (89%) Strand = Plus / Minus Query: 322 cagcagccccggggacagcagcacgaacagcaccaccgc 360 |||||||||||| ||||||| ||||||||| | |||||| Sbjct: 84 cagcagccccggcgacagcaccacgaacaggatcaccgc 46
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 77.8 bits (39), Expect = 3e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 232 gaagtagatgatggcgtggacgaggatggccatggcgctggtgtgcatgttgccgaactc 291 |||| |||||| |||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 40371777 gaagaagatgacggcgtggacgaggatggcgatggcgctggttgccatgttgccgaactc 40371718 Query: 292 cac 294 ||| Sbjct: 40371717 cac 40371715 Score = 46.1 bits (23), Expect = 0.10 Identities = 35/39 (89%) Strand = Plus / Minus Query: 322 cagcagccccggggacagcagcacgaacagcaccaccgc 360 |||||||||||| ||||||| ||||||||| | |||||| Sbjct: 40371687 cagcagccccggcgacagcaccacgaacaggatcaccgc 40371649 Score = 42.1 bits (21), Expect = 1.6 Identities = 48/57 (84%) Strand = Plus / Plus Query: 322 cagcagccccggggacagcagcacgaacagcaccaccgcgatcaccaccggccccca 378 ||||| |||||| | |||||||||||||| |||| |||||||| ||| || ||||| Sbjct: 88133 cagcaaccccggcgtcagcagcacgaacaagaccaacgcgatcagcactggacccca 88189
>dbj|AP006167.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1455F06 Length = 140848 Score = 77.8 bits (39), Expect = 3e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 232 gaagtagatgatggcgtggacgaggatggccatggcgctggtgtgcatgttgccgaactc 291 |||| |||||| |||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 80741 gaagaagatgacggcgtggacgaggatggcgatggcgctggttgccatgttgccgaactc 80682 Query: 292 cac 294 ||| Sbjct: 80681 cac 80679 Score = 46.1 bits (23), Expect = 0.10 Identities = 35/39 (89%) Strand = Plus / Minus Query: 322 cagcagccccggggacagcagcacgaacagcaccaccgc 360 |||||||||||| ||||||| ||||||||| | |||||| Sbjct: 80651 cagcagccccggcgacagcaccacgaacaggatcaccgc 80613
>dbj|AP004672.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0592G05 Length = 146220 Score = 77.8 bits (39), Expect = 3e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 232 gaagtagatgatggcgtggacgaggatggccatggcgctggtgtgcatgttgccgaactc 291 |||| |||||| |||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 23018 gaagaagatgacggcgtggacgaggatggcgatggcgctggttgccatgttgccgaactc 22959 Query: 292 cac 294 ||| Sbjct: 22958 cac 22956 Score = 46.1 bits (23), Expect = 0.10 Identities = 35/39 (89%) Strand = Plus / Minus Query: 322 cagcagccccggggacagcagcacgaacagcaccaccgc 360 |||||||||||| ||||||| ||||||||| | |||||| Sbjct: 22928 cagcagccccggcgacagcaccacgaacaggatcaccgc 22890
>dbj|AK060288.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-C11, full insert sequence Length = 524 Score = 77.8 bits (39), Expect = 3e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 232 gaagtagatgatggcgtggacgaggatggccatggcgctggtgtgcatgttgccgaactc 291 |||| |||||| |||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 252 gaagaagatgacggcgtggacgaggatggcgatggcgctggttgccatgttgccgaactc 193 Query: 292 cac 294 ||| Sbjct: 192 cac 190 Score = 46.1 bits (23), Expect = 0.10 Identities = 35/39 (89%) Strand = Plus / Minus Query: 322 cagcagccccggggacagcagcacgaacagcaccaccgc 360 |||||||||||| ||||||| ||||||||| | |||||| Sbjct: 162 cagcagccccggcgacagcaccacgaacaggatcaccgc 124
>ref|XM_472281.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 210 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Minus Query: 322 cagcagccccggggacagcagcacgaacagcaccaccgcgatcaccaccggcccccagtc 381 |||||||||||| | ||||||||||||||||||| ||| | |||||||||||||||||| Sbjct: 66 cagcagccccggcgtcagcagcacgaacagcaccgtcgccaccaccaccggcccccagtc 7 Query: 382 cg 383 || Sbjct: 6 cg 5 Score = 54.0 bits (27), Expect = 4e-04 Identities = 72/87 (82%) Strand = Plus / Minus Query: 190 gatgtgcacgccgatgacgatgacaaagagagcgatgagggcgaagtagatgatggcgtg 249 |||||| ||||||||| |||||| |||| | || ||| |||||||||| || |||||| Sbjct: 198 gatgtggacgccgatggcgatgaggaagatggtgaggagtgcgaagtagaggacggcgtg 139 Query: 250 gacgaggatggccatggcgctggtgtg 276 ||||| |||||| | | |||||||||| Sbjct: 138 gacgatgatggcgaggccgctggtgtg 112
>emb|AL731601.3|OSJN00245 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0044M19, complete sequence Length = 188317 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 322 cagcagccccggggacagcagcacgaacagcaccaccgcgatcaccaccggcccccagtc 381 |||||||||||| | ||||||||||||||||||| ||| | |||||||||||||||||| Sbjct: 164773 cagcagccccggcgtcagcagcacgaacagcaccgtcgccaccaccaccggcccccagtc 164832 Query: 382 cg 383 || Sbjct: 164833 cg 164834 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 322 cagcagccccggggacagcagcacgaacagcaccaccgcgatcaccaccggcccccagtc 381 |||||||||||| ||||||| ||||||||||||||| | | |||||||||| ||||||| Sbjct: 183361 cagcagccccggcgacagcaccacgaacagcaccactcccaccaccaccggcgcccagtc 183302 Query: 382 c 382 | Sbjct: 183301 c 183301 Score = 54.0 bits (27), Expect = 4e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 190 gatgtgcacgccgatgacgatgacaaagagagcgatgagggcgaagtagatgatggcgtg 249 |||||| ||||||||| |||||| |||| | || ||| |||||||||| || |||||| Sbjct: 164641 gatgtggacgccgatggcgatgaggaagatggtgaggagtgcgaagtagaggacggcgtg 164700 Query: 250 gacgaggatggccatggcgctggtgtg 276 ||||| |||||| | | |||||||||| Sbjct: 164701 gacgatgatggcgaggccgctggtgtg 164727 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 ggaaggagagcagcttaatt 152 |||||||||||||||||||| Sbjct: 121406 ggaaggagagcagcttaatt 121387
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 322 cagcagccccggggacagcagcacgaacagcaccaccgcgatcaccaccggcccccagtc 381 |||||||||||| | ||||||||||||||||||| ||| | |||||||||||||||||| Sbjct: 19072848 cagcagccccggcgtcagcagcacgaacagcaccgtcgccaccaccaccggcccccagtc 19072907 Query: 382 cg 383 || Sbjct: 19072908 cg 19072909 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 322 cagcagccccggggacagcagcacgaacagcaccaccgcgatcaccaccggcccccagtc 381 |||||||||||| ||||||| ||||||||||||||| | | |||||||||| ||||||| Sbjct: 19091436 cagcagccccggcgacagcaccacgaacagcaccactcccaccaccaccggcgcccagtc 19091377 Query: 382 c 382 | Sbjct: 19091376 c 19091376 Score = 54.0 bits (27), Expect = 4e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 190 gatgtgcacgccgatgacgatgacaaagagagcgatgagggcgaagtagatgatggcgtg 249 |||||| ||||||||| |||||| |||| | || ||| |||||||||| || |||||| Sbjct: 19072716 gatgtggacgccgatggcgatgaggaagatggtgaggagtgcgaagtagaggacggcgtg 19072775 Query: 250 gacgaggatggccatggcgctggtgtg 276 ||||| |||||| | | |||||||||| Sbjct: 19072776 gacgatgatggcgaggccgctggtgtg 19072802 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 ggaaggagagcagcttaatt 152 |||||||||||||||||||| Sbjct: 19029481 ggaaggagagcagcttaatt 19029462
>dbj|AK063862.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-122-D12, full insert sequence Length = 504 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Minus Query: 322 cagcagccccggggacagcagcacgaacagcaccaccgcgatcaccaccggcccccagtc 381 |||||||||||| | ||||||||||||||||||| ||| | |||||||||||||||||| Sbjct: 113 cagcagccccggcgtcagcagcacgaacagcaccgtcgccaccaccaccggcccccagtc 54 Query: 382 cg 383 || Sbjct: 53 cg 52 Score = 54.0 bits (27), Expect = 4e-04 Identities = 72/87 (82%) Strand = Plus / Minus Query: 190 gatgtgcacgccgatgacgatgacaaagagagcgatgagggcgaagtagatgatggcgtg 249 |||||| ||||||||| |||||| |||| | || ||| |||||||||| || |||||| Sbjct: 245 gatgtggacgccgatggcgatgaggaagatggtgaggagtgcgaagtagaggacggcgtg 186 Query: 250 gacgaggatggccatggcgctggtgtg 276 ||||| |||||| | | |||||||||| Sbjct: 185 gacgatgatggcgaggccgctggtgtg 159
>emb|AL731599.2|OSJN00244 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0053B21, complete sequence Length = 151936 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 322 cagcagccccggggacagcagcacgaacagcaccaccgcgatcaccaccggcccccagtc 381 |||||||||||| | ||||||||||||||||||| ||| | |||||||||||||||||| Sbjct: 6369 cagcagccccggcgtcagcagcacgaacagcaccgtcgccaccaccaccggcccccagtc 6428 Query: 382 cg 383 || Sbjct: 6429 cg 6430 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 322 cagcagccccggggacagcagcacgaacagcaccaccgcgatcaccaccggcccccagtc 381 |||||||||||| ||||||| ||||||||||||||| | | |||||||||| ||||||| Sbjct: 24957 cagcagccccggcgacagcaccacgaacagcaccactcccaccaccaccggcgcccagtc 24898 Query: 382 c 382 | Sbjct: 24897 c 24897 Score = 54.0 bits (27), Expect = 4e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 190 gatgtgcacgccgatgacgatgacaaagagagcgatgagggcgaagtagatgatggcgtg 249 |||||| ||||||||| |||||| |||| | || ||| |||||||||| || |||||| Sbjct: 6237 gatgtggacgccgatggcgatgaggaagatggtgaggagtgcgaagtagaggacggcgtg 6296 Query: 250 gacgaggatggccatggcgctggtgtg 276 ||||| |||||| | | |||||||||| Sbjct: 6297 gacgatgatggcgaggccgctggtgtg 6323
>ref|XM_472284.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 213 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 322 cagcagccccggggacagcagcacgaacagcaccaccgcgatcaccaccggcccccagtc 381 |||||||||||| ||||||| ||||||||||||||| | | |||||||||| ||||||| Sbjct: 66 cagcagccccggcgacagcaccacgaacagcaccactcccaccaccaccggcgcccagtc 7 Query: 382 c 382 | Sbjct: 6 c 6
>dbj|AK063212.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-112-D08, full insert sequence Length = 762 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 322 cagcagccccggggacagcagcacgaacagcaccaccgcgatcaccaccggcccccagtc 381 |||||||||||| ||||||| ||||||||||||||| | | |||||||||| ||||||| Sbjct: 279 cagcagccccggcgacagcaccacgaacagcaccactcccaccaccaccggcgcccagtc 220 Query: 382 c 382 | Sbjct: 219 c 219
>ref|NM_111060.2| Arabidopsis thaliana unknown protein AT3G01940 mRNA, complete cds Length = 223 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 344 acgaacagcaccaccgcgatcaccaccggcccccagtccg 383 ||||||||||||||||| | | |||||||||||||||||| Sbjct: 50 acgaacagcaccaccgcaaccgccaccggcccccagtccg 11
>gb|AC011664.10|ATAC011664 Arabidopsis thaliana chromosome III BAC F1C9 genomic sequence, complete sequence Length = 103960 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 344 acgaacagcaccaccgcgatcaccaccggcccccagtccg 383 ||||||||||||||||| | | |||||||||||||||||| Sbjct: 86333 acgaacagcaccaccgcaaccgccaccggcccccagtccg 86294
>gb|AC010797.4|ATAC010797 Arabidopsis thaliana chromosome III BAC F28J7 genomic sequence, complete sequence Length = 89154 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 344 acgaacagcaccaccgcgatcaccaccggcccccagtccg 383 ||||||||||||||||| | | |||||||||||||||||| Sbjct: 67701 acgaacagcaccaccgcaaccgccaccggcccccagtccg 67740
>gb|U63815.1|ATU63815 Arabidopsis thaliana AT.I.24-1, AT.I.24-2, AT.I.24-3, AT.I.24-4, AT.I.24-5, AT.I.24-6, AT.I.24-9 and AT.I.24-14 genes, partial cds, AT.I.24-7, ascorbate peroxidase (ATHAPX1), EF-1alpha-A1, -A2 and -A3 (EF-1alpha) and AT.I.24-13 genes, complete cds Length = 63093 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 344 acgaacagcaccaccgcgatcaccaccggcccccagtccg 383 ||||||||||||||||| | | |||||||||||||||||| Sbjct: 16135 acgaacagcaccaccgcaaccgccaccggcccccagtccg 16096
>ref|XM_477594.1| Oryza sativa (japonica cultivar-group), mRNA Length = 237 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 232 gaagtagatgatggcgtggacgaggatggccatggcgctggtgtgcatgttgccgaactc 291 |||||||| |||||||||||||||||||| | | |||||||| ||||||||| | ||| Sbjct: 165 gaagtagaggatggcgtggacgaggatggagaggccgctggtgcccatgttgcccagctc 106 Query: 292 cac 294 ||| Sbjct: 105 cac 103
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 232 gaagtagatgatggcgtggacgaggatggccatggcgctggtgtgcatgttgccgaactc 291 |||||||| |||||||||||||||||||| | | |||||||| ||||||||| | ||| Sbjct: 11736177 gaagtagaggatggcgtggacgaggatggagaggccgctggtgcccatgttgcccagctc 11736118 Query: 292 cac 294 ||| Sbjct: 11736117 cac 11736115
>dbj|AP006344.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0680C01 Length = 145580 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 232 gaagtagatgatggcgtggacgaggatggccatggcgctggtgtgcatgttgccgaactc 291 |||||||| |||||||||||||||||||| | | |||||||| ||||||||| | ||| Sbjct: 94336 gaagtagaggatggcgtggacgaggatggagaggccgctggtgcccatgttgcccagctc 94277 Query: 292 cac 294 ||| Sbjct: 94276 cac 94274
>ref|XM_465910.1| Oryza sativa (japonica cultivar-group), mRNA Length = 213 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Minus Query: 226 gagggcgaagtagatgatggcgtggacgaggatggccatggcgctggtgtgcatgttgcc 285 |||| ||||| ||| || |||||||||||||| || | | |||||||| ||||||||| Sbjct: 165 gaggacgaagaagaagacggcgtggacgaggacggagacgccgctggtgcacatgttgcc 106 Query: 286 gaactccac 294 ||||||||| Sbjct: 105 gaactccac 97
>gb|AY107575.1| Zea mays PCO083849 mRNA sequence Length = 727 Score = 50.1 bits (25), Expect = 0.006 Identities = 52/61 (85%) Strand = Plus / Minus Query: 323 agcagccccggggacagcagcacgaacagcaccaccgcgatcaccaccggcccccagtcc 382 ||||| ||||| || |||||||||||||||||||| | | |||||| || ||||||||| Sbjct: 255 agcaggcccggcgagagcagcacgaacagcaccacgcccaccaccacggggccccagtcc 196 Query: 383 g 383 | Sbjct: 195 g 195
>gb|AC005405.1|AC005405 BAC F18A17 from chromosome V containing TINY at 60.5 cM, complete sequence Length = 94362 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Minus Query: 103 aaaaacaaaagtaaagaaagaagcagaa 130 ||||||||||||||| |||||||||||| Sbjct: 44503 aaaaacaaaagtaaataaagaagcagaa 44476
>gb|AC118646.23| Mus musculus chromosome 15, clone RP24-116A18, complete sequence Length = 205272 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 103 aaaaacaaaagtaaagaaagaagcaga 129 ||||||||||||||| ||||||||||| Sbjct: 153552 aaaaacaaaagtaaaaaaagaagcaga 153578
>ref|XM_475056.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 219 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Minus Query: 226 gagggcgaagtagatgatggcgtggacgaggatgg 260 |||||||||| ||| ||||| |||||||||||||| Sbjct: 162 gagggcgaagaagaggatggtgtggacgaggatgg 128
>ref|XM_562845.1| Anopheles gambiae str. PEST ENSANGP00000028106 (ENSANGG00000024566), partial mRNA Length = 912 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 334 ggacagcagcacgaacagcacca 356 ||||||||||||||||||||||| Sbjct: 243 ggacagcagcacgaacagcacca 221
>gb|AC018632.1|AC018632 Genomic Sequence For Arabidopsis thaliana Clone F3F24, Chromosome V, complete sequence Length = 151828 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 108 caaaagtaaagaaagaagcagaagagg 134 |||||||||||||||||| |||||||| Sbjct: 10032 caaaagtaaagaaagaagaagaagagg 10058
>dbj|AK062996.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-109-G10, full insert sequence Length = 517 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Minus Query: 226 gagggcgaagtagatgatggcgtggacgaggatgg 260 |||||||||| ||| ||||| |||||||||||||| Sbjct: 278 gagggcgaagaagaggatggtgtggacgaggatgg 244
>gb|AC122263.5| Mus musculus BAC clone RP23-190O11 from 15, complete sequence Length = 207234 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 392 cctcaccctcttccttcctcttc 414 ||||||||||||||||||||||| Sbjct: 108375 cctcaccctcttccttcctcttc 108353
>emb|AL732563.5| Mouse DNA sequence from clone RP23-209M8 on chromosome 4, complete sequence Length = 199818 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 388 cctccctcaccctcttccttcctcttc 414 |||||| |||||||||||||||||||| Sbjct: 116177 cctcccacaccctcttccttcctcttc 116203
>dbj|AP001207.3| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1562D12 Length = 153936 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Plus Query: 103 aaaaacaaaagtaaagaaagaagcagaagaggaag 137 ||||| ||||| ||||||||||| ||||||||||| Sbjct: 100593 aaaaagaaaagaaaagaaagaagaagaagaggaag 100627
>gb|AC102663.6| Mus musculus chromosome 6, clone RP23-244M15, complete sequence Length = 223742 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 111 aagtaaagaaagaagcagaaga 132 |||||||||||||||||||||| Sbjct: 37825 aagtaaagaaagaagcagaaga 37804
>gb|DQ485413.1| Bos taurus BTA04 BES6_Contig314_677 genomic sequence contig containing highly polymorphic single nucleotide sites Length = 12089 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 391 ccctcaccctcttccttcctct 412 |||||||||||||||||||||| Sbjct: 7477 ccctcaccctcttccttcctct 7498
>emb|AL356319.18| Human DNA sequence from clone RP11-810G21 on chromosome 13 Contains a CpG island, complete sequence Length = 137260 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 116 aagaaagaagcagaagaggaaggaga 141 |||||||||| ||||||||||||||| Sbjct: 49663 aagaaagaagaagaagaggaaggaga 49638
>gb|AF527443.1| Phaseolus vulgaris clone PvDR-10 hypothetical protein mRNA, complete cds Length = 467 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Minus Query: 341 agcacgaacagcaccaccgcgatcaccaccggccccca 378 ||||||||||||||||| ||||| | |||||| ||||| Sbjct: 80 agcacgaacagcaccactgcgatgatcaccgggcccca 43
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 341 agcacgaacagcaccaccgcga 362 |||||||||||||||||||||| Sbjct: 3615899 agcacgaacagcaccaccgcga 3615920
>dbj|AK071540.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023101E05, full insert sequence Length = 683 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Minus Query: 227 agggcgaagtagatgatggcgtggacgaggatgg 260 ||||||||| ||| ||||| |||||||||||||| Sbjct: 280 agggcgaagaagaggatggtgtggacgaggatgg 247
>emb|AL808132.5| Mouse DNA sequence from clone RP23-125A12 on chromosome X, complete sequence Length = 201114 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 103 aaaaacaaaagtaaagaaagaa 124 |||||||||||||||||||||| Sbjct: 201017 aaaaacaaaagtaaagaaagaa 200996
>emb|AL831760.3| Mouse DNA sequence from clone RP23-382F2 on chromosome X, complete sequence Length = 138140 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 103 aaaaacaaaagtaaagaaagaa 124 |||||||||||||||||||||| Sbjct: 1903 aaaaacaaaagtaaagaaagaa 1882
>gb|AC124664.14| Mus musculus chromosome 1, clone RP23-103B18, complete sequence Length = 220456 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 390 tccctcaccctcttccttcctcttc 414 |||||||| |||||||||||||||| Sbjct: 33594 tccctcactctcttccttcctcttc 33618
>ref|XM_549812.1| Oryza sativa (japonica cultivar-group), mRNA Length = 219 Score = 42.1 bits (21), Expect = 1.6 Identities = 48/57 (84%) Strand = Plus / Minus Query: 322 cagcagccccggggacagcagcacgaacagcaccaccgcgatcaccaccggccccca 378 ||||| |||||| | |||||||||||||| |||| |||||||| ||| || ||||| Sbjct: 72 cagcaaccccggcgtcagcagcacgaacaagaccaacgcgatcagcactggacccca 16
>gb|BT016869.1| Zea mays clone Contig702 mRNA sequence Length = 1808 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 405 cttcctcttctccgacgccggcgac 429 |||| |||||||||||||||||||| Sbjct: 1738 cttcttcttctccgacgccggcgac 1762
>gb|AC115896.9| Mus musculus chromosome 1, clone RP24-443M8, complete sequence Length = 203303 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 390 tccctcaccctcttccttcctcttc 414 |||||||| |||||||||||||||| Sbjct: 36327 tccctcactctcttccttcctcttc 36303
>gb|BC073025.1| Xenopus laevis hypothetical protein LOC443609, mRNA (cDNA clone IMAGE:5048812), partial cds Length = 1950 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 394 tcaccctcttccttcctcttc 414 ||||||||||||||||||||| Sbjct: 967 tcaccctcttccttcctcttc 987
>ref|XM_414504.1| PREDICTED: Gallus gallus similar to SLIT3 (LOC416171), mRNA Length = 1907 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 388 cctccctcaccctcttccttcctct 412 ||||||||||||||| ||||||||| Sbjct: 212 cctccctcaccctctcccttcctct 236
>ref|XM_665128.1| Plasmodium berghei strain ANKA hypothetical protein (PB405875.00.0) partial mRNA Length = 696 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 109 aaaagtaaagaaagaagcaga 129 ||||||||||||||||||||| Sbjct: 511 aaaagtaaagaaagaagcaga 531
>ref|XM_670931.1| Plasmodium berghei strain ANKA U2 snRNP auxiliary factor, (PB001017.03.0) partial mRNA Length = 1893 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 109 aaaagtaaagaaagaagcaga 129 ||||||||||||||||||||| Sbjct: 322 aaaagtaaagaaagaagcaga 342
>gb|AC157737.2| Xenopus tropicalis clone ISB1-388J19, complete sequence Length = 74648 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 118 gaaagaagcagaagaggaagg 138 ||||||||||||||||||||| Sbjct: 39930 gaaagaagcagaagaggaagg 39910
>gb|AC123178.4| Rattus norvegicus 7 BAC CH230-20I17 (Children's Hospital Oakland Research Institute) complete sequence Length = 221236 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 115 aaagaaagaagcagaagaggaagga 139 ||||||||| ||||||||||||||| Sbjct: 136244 aaagaaagaggcagaagaggaagga 136268
>emb|CR533559.1| Homo sapiens full open reading frame cDNA clone RZPDo834F0821D for gene TIGD6, tigger transposable element derived 6; complete cds, incl. stopcodon Length = 1766 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 93 agagtcagccaaaaacaaaagtaaagaaa 121 |||| |||||||||||||||| ||||||| Sbjct: 1754 agagacagccaaaaacaaaagaaaagaaa 1726
>emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete genome; segment 10/29 Length = 310550 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 349 cagcaccaccgcgatcaccac 369 ||||||||||||||||||||| Sbjct: 163238 cagcaccaccgcgatcaccac 163218
>emb|AL929353.1|PFA929353 Plasmodium falciparum strain 3D7, chromosome 5, segment 3/4 Length = 343050 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 101 ccaaaaacaaaagtaaagaaagaag 125 ||||||| ||||||||||||||||| Sbjct: 272496 ccaaaaaaaaaagtaaagaaagaag 272520
>emb|AL136539.1|HSM801513 Homo sapiens mRNA; cDNA DKFZp761E2110 (from clone DKFZp761E2110) Length = 3434 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 93 agagtcagccaaaaacaaaagtaaagaaa 121 |||| |||||||||||||||| ||||||| Sbjct: 1940 agagacagccaaaaacaaaagaaaagaaa 1912
>gb|AC109211.10| Mus musculus chromosome 8, clone RP23-27N18, complete sequence Length = 212670 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 112 agtaaagaaagaagcagaaga 132 ||||||||||||||||||||| Sbjct: 91459 agtaaagaaagaagcagaaga 91439
>dbj|AK056604.1| Homo sapiens cDNA FLJ32042 fis, clone NTONG2000878, weakly similar to MAJOR CENTROMERE AUTOANTIGEN B Length = 2582 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 93 agagtcagccaaaaacaaaagtaaagaaa 121 |||| |||||||||||||||| ||||||| Sbjct: 2017 agagacagccaaaaacaaaagaaaagaaa 1989
>gb|AC011406.5| Homo sapiens chromosome 5 clone CTB-46E9, complete sequence Length = 89012 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 93 agagtcagccaaaaacaaaagtaaagaaa 121 |||| |||||||||||||||| ||||||| Sbjct: 58229 agagacagccaaaaacaaaagaaaagaaa 58201
>ref|NM_030953.2| Homo sapiens tigger transposable element derived 6 (TIGD6), mRNA Length = 3508 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 93 agagtcagccaaaaacaaaagtaaagaaa 121 |||| |||||||||||||||| ||||||| Sbjct: 2016 agagacagccaaaaacaaaagaaaagaaa 1988
>gb|AC010256.6| Homo sapiens chromosome 5 clone CTC-445M6, complete sequence Length = 141488 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 117 agaaagaagcagaagaggaag 137 ||||||||||||||||||||| Sbjct: 65151 agaaagaagcagaagaggaag 65131
>gb|AC025882.7| Homo sapiens chromosome 17, clone RP11-445F12, complete sequence Length = 181991 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 391 ccctcaccctcttccttcctc 411 ||||||||||||||||||||| Sbjct: 114244 ccctcaccctcttccttcctc 114264
>gb|AC009941.5|AC009941 Homo sapiens, clone RP11-115D10, complete sequence Length = 168829 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 104 aaaacaaaagtaaagaaagaagcagaaga 132 |||| ||||||||||||||||| |||||| Sbjct: 90917 aaaagaaaagtaaagaaagaagaagaaga 90945
>gb|AC096734.3| Homo sapiens BAC clone RP11-109E24 from 4, complete sequence Length = 179753 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 104 aaaacaaaagtaaagaaagaa 124 ||||||||||||||||||||| Sbjct: 171794 aaaacaaaagtaaagaaagaa 171774
>gb|AC093901.2| Homo sapiens BAC clone RP11-730J4 from 2, complete sequence Length = 161153 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 397 ccctcttccttcctcttctcc 417 ||||||||||||||||||||| Sbjct: 105414 ccctcttccttcctcttctcc 105434
>gb|AC131954.1| Homo sapiens BAC clone RP11-761I13 from 2, complete sequence Length = 100732 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 124 agcagaagaggaaggagagcagctt 148 |||||||||||||||| |||||||| Sbjct: 94067 agcagaagaggaaggacagcagctt 94043
>dbj|AP003727.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0672D08 Length = 173729 Score = 42.1 bits (21), Expect = 1.6 Identities = 48/57 (84%) Strand = Plus / Plus Query: 322 cagcagccccggggacagcagcacgaacagcaccaccgcgatcaccaccggccccca 378 ||||| |||||| | |||||||||||||| |||| |||||||| ||| || ||||| Sbjct: 85935 cagcaaccccggcgtcagcagcacgaacaagaccaacgcgatcagcactggacccca 85991
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 343 cacgaacagcaccaccgcgatcacc 367 |||||||||||||||||| |||||| Sbjct: 2311939 cacgaacagcaccaccgccatcacc 2311915
>gb|AC003956.1|AC003956 Homo sapiens DNA from chromosome 19, cosmid R34078, complete sequence Length = 46327 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 397 ccctcttccttcctcttctcc 417 ||||||||||||||||||||| Sbjct: 10369 ccctcttccttcctcttctcc 10349
>emb|AL512359.2|CNS07EF8 Human chromosome 14 DNA sequence BAC R-286B5 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 157395 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 104 aaaacaaaagtaaagaaagaagcagaaga 132 ||||||||| |||||||||||| |||||| Sbjct: 109566 aaaacaaaaataaagaaagaagaagaaga 109538
>gb|M35333.1|DVUHYDAB D.fructosovorans periplasmic hydrogenase (hydA and hydB) gene, complete cds Length = 3180 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 cgaggatggccatggcgctgg 272 ||||||||||||||||||||| Sbjct: 1980 cgaggatggccatggcgctgg 1960
>emb|AL671759.10| Mouse DNA sequence from clone RP23-151A15 on chromosome 4, complete sequence Length = 141790 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 103 aaaaacaaaagtaaagaaagaagcagaagagga 135 ||||| ||||| ||||||||||| ||||||||| Sbjct: 9683 aaaaaaaaaagaaaagaaagaaggagaagagga 9715
>dbj|AP002969.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0455C04 Length = 147940 Score = 42.1 bits (21), Expect = 1.6 Identities = 48/57 (84%) Strand = Plus / Plus Query: 322 cagcagccccggggacagcagcacgaacagcaccaccgcgatcaccaccggccccca 378 ||||| |||||| | |||||||||||||| |||| |||||||| ||| || ||||| Sbjct: 36679 cagcaaccccggcgtcagcagcacgaacaagaccaacgcgatcagcactggacccca 36735
>dbj|AP003610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0402A09 Length = 141966 Score = 42.1 bits (21), Expect = 1.6 Identities = 48/57 (84%) Strand = Plus / Plus Query: 322 cagcagccccggggacagcagcacgaacagcaccaccgcgatcaccaccggccccca 378 ||||| |||||| | |||||||||||||| |||| |||||||| ||| || ||||| Sbjct: 73063 cagcaaccccggcgtcagcagcacgaacaagaccaacgcgatcagcactggacccca 73119
>gb|AC114667.12| Mus musculus chromosome 1, clone RP24-175L10, complete sequence Length = 171306 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 391 ccctcaccctcttccttcctcttc 414 |||||||||||||||| ||||||| Sbjct: 103402 ccctcaccctcttcctgcctcttc 103425
>ref|XM_514796.1| PREDICTED: Pan troglodytes similar to Myelin transcription factor 1 (MYT1) (MYTI) (Proteolipid protein binding protein) (PLPB1) (LOC458428), mRNA Length = 4848 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 agctgcagcagcagccccgg 333 |||||||||||||||||||| Sbjct: 1837 agctgcagcagcagccccgg 1856
>gb|AC151736.6| Mus musculus BAC clone RP23-9L16 from chromosome 8, complete sequence Length = 239812 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 390 tccctcaccctcttccttcctcttctcc 417 |||||| |||||||||||||||| |||| Sbjct: 73333 tccctctccctcttccttcctctcctcc 73360
>gb|AC163657.3| Mus musculus BAC clone RP24-302A24 from chromosome 1, complete sequence Length = 197913 Score = 40.1 bits (20), Expect = 6.2 Identities = 32/36 (88%) Strand = Plus / Minus Query: 102 caaaaacaaaagtaaagaaagaagcagaagaggaag 137 ||||||||||| ||| ||||||| ||||||||||| Sbjct: 158000 caaaaacaaaaaaaaaaaaagaagaagaagaggaag 157965
>ref|NM_004535.2| Homo sapiens myelin transcription factor 1 (MYT1), mRNA Length = 5550 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 agctgcagcagcagccccgg 333 |||||||||||||||||||| Sbjct: 2426 agctgcagcagcagccccgg 2445
>gb|AC149420.2| Phakopsora pachyrhizi clone JGIAFNA-77J16, complete sequence Length = 29644 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 caacaaagtaaacatcatca 53 |||||||||||||||||||| Sbjct: 22831 caacaaagtaaacatcatca 22850
>gb|AC159972.5| Mus musculus chromosome 1, clone RP23-35D23, complete sequence Length = 199094 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 aaagaagcagaagaggaaggagag 142 |||||||||||| ||||||||||| Sbjct: 184161 aaagaagcagaataggaaggagag 184184
>gb|AC158348.4| Mus musculus chromosome 8, clone RP24-134G9, complete sequence Length = 175836 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 aagcagaagaggaaggagag 142 |||||||||||||||||||| Sbjct: 138245 aagcagaagaggaaggagag 138226
>gb|AC005364.1| Homo sapiens chromosome 16, cosmid clone 53H2 (LANL), complete sequence Length = 36342 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 387 tcctccctcaccctcttccttcctcttc 414 ||||||||| ||||| |||||||||||| Sbjct: 1147 tcctccctctccctcctccttcctcttc 1174
>gb|AC005347.1| Homo sapiens chromosome 16, cosmid clone 308C6 (LANL), complete sequence Length = 35828 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 387 tcctccctcaccctcttccttcctcttc 414 ||||||||| ||||| |||||||||||| Sbjct: 21935 tcctccctctccctcctccttcctcttc 21962
>gb|AC102075.7| Mus musculus chromosome 5, clone RP23-389F20, complete sequence Length = 208311 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 cctcttccttcctcttctcc 417 |||||||||||||||||||| Sbjct: 10908 cctcttccttcctcttctcc 10889
>gb|AC168275.4| Mus musculus 10 BAC RP23-350O21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 188458 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 389 ctccctcaccctcttccttcctct 412 ||||||| |||||||||||||||| Sbjct: 4850 ctccctctccctcttccttcctct 4873
>gb|AC168276.3| Mus musculus BAC RP24-485I12 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 186675 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 389 ctccctcaccctcttccttcctct 412 ||||||| |||||||||||||||| Sbjct: 118753 ctccctctccctcttccttcctct 118776
>gb|AC113291.16| Mus musculus chromosome 9, clone RP23-417K23, complete sequence Length = 200428 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 389 ctccctcaccctcttccttcctct 412 |||||||||||||| ||||||||| Sbjct: 88718 ctccctcaccctctcccttcctct 88741
>gb|AC068064.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-199I14, complete sequence Length = 152776 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 389 ctccctcaccctcttccttcctct 412 ||||||| |||||||||||||||| Sbjct: 90054 ctccctctccctcttccttcctct 90031
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 acgaacagcaccaccgcgatcacc 367 ||||||||||||||||| |||||| Sbjct: 2585486 acgaacagcaccaccgccatcacc 2585463
>gb|AC137002.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBb0061M13, complete sequence Length = 174910 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 410 tcttctccgacgccggcgac 429 |||||||||||||||||||| Sbjct: 45725 tcttctccgacgccggcgac 45706
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 337 cagcagcacgaacagcaccaccgc 360 ||||||||||||||||| |||||| Sbjct: 2512155 cagcagcacgaacagcatcaccgc 2512178
>gb|AC101714.10| Mus musculus chromosome 8, clone RP23-283I2, complete sequence Length = 157233 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 aagcagaagaggaaggagag 142 |||||||||||||||||||| Sbjct: 20918 aagcagaagaggaaggagag 20899
>gb|AC098390.6| Rattus norvegicus 1 BAC CH230-1M24 (Children's Hospital Oakland Research Institute) complete sequence Length = 196477 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 agtaaagaaagaagcagaag 131 |||||||||||||||||||| Sbjct: 39556 agtaaagaaagaagcagaag 39575
>gb|AC147905.2| Xenopus tropicalis clone CH216-68C1, complete sequence Length = 159448 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 gaaagaagcagaagaggaag 137 |||||||||||||||||||| Sbjct: 109536 gaaagaagcagaagaggaag 109555
>gb|AC108798.11| Mus musculus chromosome 5, clone RP23-419N6, complete sequence Length = 211603 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 cctcttccttcctcttctcc 417 |||||||||||||||||||| Sbjct: 35819 cctcttccttcctcttctcc 35800
>gb|AY278407.1| Drosophila serrata histone H2A gene, partial cds; and histone H2B-like gene, partial sequence Length = 488 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 aagaagcagaagaggaaggagagc 143 ||||||| |||||||||||||||| Sbjct: 427 aagaagcggaagaggaaggagagc 450
>gb|AY147438.1| Drosophila punjabiensis isolate YY001339 histone H2A gene, partial cds; H2A/H2B intergenic spacer region, complete sequence; and histone H2B gene, partial cds Length = 488 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 aagaagcagaagaggaaggagagc 143 ||||||| |||||||||||||||| Sbjct: 428 aagaagcggaagaggaaggagagc 451
>gb|AY147437.1| Drosophila leontia isolate YY001338 histone H2A gene, partial cds; H2A/H2B intergenic spacer region, complete sequence; and histone H2B-like gene, partial sequence Length = 497 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 aagaagcagaagaggaaggagagc 143 ||||||| |||||||||||||||| Sbjct: 436 aagaagcggaagaggaaggagagc 459
>gb|AY147436.1| Drosophila leontia isolate YY001337 histone H2A gene, partial cds; H2A/H2B intergenic spacer region, complete sequence; and histone H2B-like gene, partial sequence Length = 497 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 aagaagcagaagaggaaggagagc 143 ||||||| |||||||||||||||| Sbjct: 436 aagaagcggaagaggaaggagagc 459
>gb|AY147435.1| Drosophila kikkawai isolate YY001336 histone H2A gene, partial cds; H2A/H2B intergenic spacer region, complete sequence; and histone H2B gene, partial cds Length = 494 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 aagaagcagaagaggaaggagagc 143 ||||||| |||||||||||||||| Sbjct: 435 aagaagcggaagaggaaggagagc 458
>gb|AY147434.1| Drosophila jambulina isolate YY001335 histone H2A gene, partial cds; H2A/H2B intergenic spacer region, complete sequence; and histone H2B gene, partial cds Length = 484 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 aagaagcagaagaggaaggagagc 143 ||||||| |||||||||||||||| Sbjct: 425 aagaagcggaagaggaaggagagc 448
>gb|AY147429.1| Drosophila seguyi isolate YY001340 histone H2A gene, partial cds; H2A/H2B intergenic spacer region, complete sequence; and histone H2B-like gene, partial sequence Length = 488 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 aagaagcagaagaggaaggagagc 143 ||||||| |||||||||||||||| Sbjct: 427 aagaagcggaagaggaaggagagc 450
>gb|AY147428.1| Drosophila birchii isolate YY001334 histone H2A gene, partial cds; H2A/H2B intergenic spacer region, complete sequence; and histone H2B gene, partial cds Length = 495 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 aagaagcagaagaggaaggagagc 143 ||||||| |||||||||||||||| Sbjct: 436 aagaagcggaagaggaaggagagc 459
>gb|AY147427.1| Drosophila bocki isolate YY001333 histone H2A gene, partial cds; H2A/H2B intergenic spacer region, complete sequence; and histone H2B gene, partial cds Length = 494 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 aagaagcagaagaggaaggagagc 143 ||||||| |||||||||||||||| Sbjct: 435 aagaagcggaagaggaaggagagc 458
>gb|AY147426.1| Drosophila baimaii isolate YY001332 histone H2A gene, partial cds; H2A/H2B intergenic spacer region, complete sequence; and histone H2B gene, partial cds Length = 487 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 aagaagcagaagaggaaggagagc 143 ||||||| |||||||||||||||| Sbjct: 427 aagaagcggaagaggaaggagagc 450
>gb|AY147425.1| Drosophila barbarae isolate DPYY1331 histone H2A gene, partial cds; H2A/H2B intergenic spacer region, complete sequence; and histone H2B gene, partial cds Length = 492 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 aagaagcagaagaggaaggagagc 143 ||||||| |||||||||||||||| Sbjct: 433 aagaagcggaagaggaaggagagc 456
>gb|AY147424.1| Drosophila triauraria isolate YY001330 histone H2A gene, partial cds; H2A/H2B intergenic spacer region, complete sequence; and histone H2B gene, partial cds Length = 487 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 aagaagcagaagaggaaggagagc 143 ||||||| |||||||||||||||| Sbjct: 427 aagaagcggaagaggaaggagagc 450
>gb|AY147423.1| Drosophila tani isolate YY001329 histone H2A gene, partial cds; H2A/H2B intergenic spacer region, complete sequence; and histone H2B gene, partial cds Length = 488 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 aagaagcagaagaggaaggagagc 143 ||||||| |||||||||||||||| Sbjct: 429 aagaagcggaagaggaaggagagc 452
>gb|AY147422.1| Drosophila rufa isolate YY001328 histone H2A gene, partial cds; H2A/H2B intergenic spacer region, complete sequence; and histone H2B gene, partial cds Length = 486 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 aagaagcagaagaggaaggagagc 143 ||||||| |||||||||||||||| Sbjct: 427 aagaagcggaagaggaaggagagc 450
>gb|AY147421.1| Drosophila quadraria isolate YY001327 histone H2A gene, partial cds; H2A/H2B intergenic spacer region, complete sequence; and histone H2B gene, partial cds Length = 487 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 aagaagcagaagaggaaggagagc 143 ||||||| |||||||||||||||| Sbjct: 426 aagaagcggaagaggaaggagagc 449
>gb|AY147420.1| Drosophila biauraria isolate YY001326 histone H2A gene, partial cds; H2A/H2B intergenic spacer region, complete sequence; and histone H2B gene, partial cds Length = 487 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 aagaagcagaagaggaaggagagc 143 ||||||| |||||||||||||||| Sbjct: 427 aagaagcggaagaggaaggagagc 450
>gb|AY147419.1| Drosophila auraria isolate DPAJ1325 histone H2A gene, partial cds; H2A/H2B intergenic spacer region, complete sequence; and histone H2B gene, partial cds Length = 486 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 aagaagcagaagaggaaggagagc 143 ||||||| |||||||||||||||| Sbjct: 426 aagaagcggaagaggaaggagagc 449
>gb|AY147418.1| Drosophila auraria isolate YY001325 histone H2A gene, partial cds; H2A/H2B intergenic spacer region, complete sequence; and histone H2B gene, partial cds Length = 486 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 aagaagcagaagaggaaggagagc 143 ||||||| |||||||||||||||| Sbjct: 426 aagaagcggaagaggaaggagagc 449
>ref|XM_823473.1| Trypanosoma brucei TREU927 hypothetical protein (Tb11.02.2520) partial mRNA Length = 1179 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 cctcttccttcctcttctcc 417 |||||||||||||||||||| Sbjct: 829 cctcttccttcctcttctcc 810
>gb|AC107664.8| Mus musculus chromosome 17, clone RP23-103F2, complete sequence Length = 208198 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 agaaagaagcagaagaggaa 136 |||||||||||||||||||| Sbjct: 39283 agaaagaagcagaagaggaa 39264
>gb|AC126942.4| Mus musculus BAC clone RP23-174P9 from chromosome 17, complete sequence Length = 182423 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 agaaagaagcagaagaggaa 136 |||||||||||||||||||| Sbjct: 162648 agaaagaagcagaagaggaa 162629
>gb|AC122344.3| Mus musculus BAC clone RP23-364M19 from chromosome 9, complete sequence Length = 209165 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 aaagaaagaagcagaagagg 134 |||||||||||||||||||| Sbjct: 186636 aaagaaagaagcagaagagg 186655
>emb|AL591791.1|SME591791 Sinorhizobium meliloti 1021 complete chromosome; segment 10/12 Length = 340900 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 416 ccgacgccggcgaccacgta 435 |||||||||||||||||||| Sbjct: 219525 ccgacgccggcgaccacgta 219506
>gb|AC102573.10| Mus musculus chromosome 1, clone RP23-237L7, complete sequence Length = 185146 Score = 40.1 bits (20), Expect = 6.2 Identities = 32/36 (88%) Strand = Plus / Minus Query: 102 caaaaacaaaagtaaagaaagaagcagaagaggaag 137 ||||||||||| ||| ||||||| ||||||||||| Sbjct: 15599 caaaaacaaaaaaaaaaaaagaagaagaagaggaag 15564
>gb|AC125094.5| Mus musculus BAC clone RP24-176L12 from chromosome 16, complete sequence Length = 170842 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 389 ctccctcaccctcttccttcctct 412 ||||||| |||||||||||||||| Sbjct: 3588 ctccctctccctcttccttcctct 3565
>ref|XM_648718.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (71.t00023) partial mRNA Length = 861 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 110 aaagtaaagaaagaagcagaagag 133 |||| ||||||||||||||||||| Sbjct: 538 aaagcaaagaaagaagcagaagag 561 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 110 aaagtaaagaaagaagcagaagag 133 |||| ||||||||||||||||||| Sbjct: 514 aaagcaaagaaagaagcagaagag 537 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 110 aaagtaaagaaagaagcagaagag 133 |||| ||||||||||||||||||| Sbjct: 490 aaagcaaagaaagaagcagaagag 513 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 110 aaagtaaagaaagaagcagaagag 133 |||| ||||||||||||||||||| Sbjct: 466 aaagcaaagaaagaagcagaagag 489
>gb|AC164570.3| Mus musculus BAC clone CH25-194I22 from chromosome 5, complete sequence Length = 103796 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 caccctcttccttcctcttc 414 |||||||||||||||||||| Sbjct: 76021 caccctcttccttcctcttc 76002
>gb|AC079440.38| Mus musculus strain 129/Sv clone ct7-340l7 map 2, complete sequence Length = 131387 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 cctcttccttcctcttctcc 417 |||||||||||||||||||| Sbjct: 56020 cctcttccttcctcttctcc 56039
>gb|BC053638.1| Homo sapiens myelin transcription factor 1, mRNA (cDNA clone IMAGE:4933873), partial cds Length = 4362 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 agctgcagcagcagccccgg 333 |||||||||||||||||||| Sbjct: 1238 agctgcagcagcagccccgg 1257
>gb|AC163440.3| Mus musculus chromosome 1, clone RP23-445K8, complete sequence Length = 194714 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 391 ccctcaccctcttccttcctcttc 414 |||||||||||||||| ||||||| Sbjct: 183297 ccctcaccctcttcctgcctcttc 183274
>emb|AL591604.6| Human DNA sequence from clone RP11-356F4 on chromosome 1 Contains the 5' end of the SLICK gene for a sodium- and chloride-activated ATP-sensitive potassium channel, complete sequence Length = 185560 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 103 aaaaacaaaagtaaagaaagaagcagaa 130 ||||| |||||||||||||||| ||||| Sbjct: 70058 aaaaaaaaaagtaaagaaagaaacagaa 70085
>emb|AL445201.14| Human DNA sequence from clone RP11-358L16 on chromosome 10 Contains a AFR GTPase-activating protein (MRIP2) pseudogene, a novel gene, gene LOC93550, the 3' end of a KIAA0592 pseudogene and three CpG islands, complete sequence Length = 179193 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 aaaagtaaagaaagaagcag 128 |||||||||||||||||||| Sbjct: 88215 aaaagtaaagaaagaagcag 88234
>emb|AL357083.19| Human DNA sequence from clone RP11-562P17 on chromosome 13 Contains part of the NEAB gene for neurobeachin (BCL8B FLJ10197 KIAA1544) and a prohibitin (PHB) pseudogene, complete sequence Length = 134156 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 123 aagcagaagaggaaggagagcagc 146 |||||||||||||| ||||||||| Sbjct: 100479 aagcagaagaggaaagagagcagc 100502
>emb|AL359706.18| Human DNA sequence from clone RP11-245H20 on chromosome 13 Contains the 5' end of the NUFIP1 gene for nuclear fragile X mental retardation protein interacting protein 1, the gene for lipopolysaccharide specific response-7 protein (LSR7) and a CpG island, complete sequence Length = 61576 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 agaaagaagcagaagaggaa 136 |||||||||||||||||||| Sbjct: 24567 agaaagaagcagaagaggaa 24586
>emb|AL353682.11| Human DNA sequence from clone RP11-203D19 on chromosome 9 Contains the 3' end of the TLE1 gene for transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila) (ESG, GRG1), complete sequence Length = 90331 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 112 agtaaagaaagaagcagaagaggaagga 139 |||||||| ||||||||||| ||||||| Sbjct: 33263 agtaaagatagaagcagaaggggaagga 33290
>emb|AL158048.35| Human DNA sequence from clone RP5-963K15 on chromosome 1p36.21-36.33 Contains the SLC2A5 gene for solute carrier family 2 (facilitated glucose/fructose transporter) member 5, two novel genes and two CpG islands, complete sequence Length = 139111 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 ccctcttccttcctcttctc 416 |||||||||||||||||||| Sbjct: 45292 ccctcttccttcctcttctc 45273
>emb|AL157812.5| Human DNA sequence from clone RP11-14B2 on chromosome 13q21.1-21.3 Contains GSSs and STSs, complete sequence Length = 166971 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 agaaagaagcagaagaggaa 136 |||||||||||||||||||| Sbjct: 48246 agaaagaagcagaagaggaa 48265
>emb|AL137024.27| Human DNA sequence from clone RP11-45A16 on chromosome 9q32-33.3 Contains the 3' end of the PAPPA gene for pregnancy-associated plasma protein A, a novel gene and the 3'end of the ASTN2 gene for astrotactin 2, complete sequence Length = 159430 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 397 ccctcttccttcctcttctc 416 |||||||||||||||||||| Sbjct: 81486 ccctcttccttcctcttctc 81505
>emb|AL121581.41|HS1022E24 Human DNA sequence from clone RP5-1022E24 on chromosome 20 Contains the 3' end of the OPRL1 gene for opiate receptor-like 1 protein, the GPR8 gene encoding a G protein-coupled receptor, the KIAA0835 gene encoding a protein similar to the myelin transcription factor 1 (MYT1), a novel gene, 7 CpG islands, ESTs, STSs and GSSs, complete sequence Length = 179888 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 agctgcagcagcagccccgg 333 |||||||||||||||||||| Sbjct: 124849 agctgcagcagcagccccgg 124868
>gb|AY233689.1| Myrmecia pyriformis cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial gene for mitochondrial product Length = 886 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 gtaaagaaagaagcagaaga 132 |||||||||||||||||||| Sbjct: 383 gtaaagaaagaagcagaaga 364
>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome Length = 3523383 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 80 aagaacagaggcaagagtcagcca 103 |||||||||||||||| ||||||| Sbjct: 1238137 aagaacagaggcaagattcagcca 1238114
>gb|AC161816.5| Mus musculus BAC clone RP23-308L3 from chromosome 16, complete sequence Length = 213324 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 389 ctccctcaccctcttccttcctct 412 ||||||| |||||||||||||||| Sbjct: 127716 ctccctctccctcttccttcctct 127739
>gb|AC166324.1| Mus musculus BAC clone RP24-500J7 from chromosome 9, complete sequence Length = 168018 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 115 aaagaaagaagcagaagaggaagg 138 ||||||||||| |||||||||||| Sbjct: 156003 aaagaaagaagaagaagaggaagg 155980
>emb|BX842579.1| Mycobacterium tuberculosis H37Rv complete genome; segment 8/13 Length = 348247 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 acgaacagcaccaccgcgatcacc 367 ||||||||||||||||| |||||| Sbjct: 164801 acgaacagcaccaccgccatcacc 164778
>ref|NM_001016227.2| Xenopus tropicalis zinc finger protein 289, ID1 regulated (znf289), mRNA Length = 3414 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 taaagaaagaagcagaagag 133 |||||||||||||||||||| Sbjct: 817 taaagaaagaagcagaagag 836
>emb|BX248342.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 9/14 Length = 306550 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 acgaacagcaccaccgcgatcacc 367 ||||||||||||||||| |||||| Sbjct: 56235 acgaacagcaccaccgccatcacc 56212
>emb|AL731792.12| Mouse DNA sequence from clone RP23-189P1 on chromosome 11 Contains the 5' end of a novel gene, the 3' end of the Spnb2 gene for spectrin beta 2 and a CpG island, complete sequence Length = 143722 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 114 taaagaaagaagcagaagaggaag 137 |||||||||||| ||||||||||| Sbjct: 46523 taaagaaagaaggagaagaggaag 46546
>gb|AC010857.8| Homo sapiens chromosome 8, clone RP11-301G7, complete sequence Length = 155064 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 cctcttccttcctcttctcc 417 |||||||||||||||||||| Sbjct: 114972 cctcttccttcctcttctcc 114991
>dbj|AP007277.1| Grasseichthys gabonensis mitochondrial DNA, complete genome Length = 16867 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 gagggcgaagtagatgatgg 245 |||||||||||||||||||| Sbjct: 15452 gagggcgaagtagatgatgg 15433
>gb|AC026224.6| Homo sapiens chromosome 10 clone RP11-74N14, complete sequence Length = 167768 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 391 ccctcaccctcttccttcctcttc 414 |||||||||||||||||| ||||| Sbjct: 113282 ccctcaccctcttccttcatcttc 113259
>dbj|AB028973.1| Homo sapiens mRNA for KIAA1050 protein, partial cds Length = 5969 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 agctgcagcagcagccccgg 333 |||||||||||||||||||| Sbjct: 1186 agctgcagcagcagccccgg 1205
>gb|AC103716.2| Homo sapiens chromosome 8, clone RP11-344I13, complete sequence Length = 180624 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 387 tcctccctcaccctcttccttcct 410 ||||||||||| |||||||||||| Sbjct: 6980 tcctccctcactctcttccttcct 6957
>gb|AC023192.8| Homo sapiens chromosome 18, clone RP11-562H1, complete sequence Length = 167944 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 cagccaaaaacaaaagtaaa 117 |||||||||||||||||||| Sbjct: 152240 cagccaaaaacaaaagtaaa 152221
>gb|AF169823.1| Spodoptera exigua nucleopolyhedrovirus complete genome Length = 135611 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 193 gtgcacgccgatgacgatgacaaa 216 |||||||||||| ||||||||||| Sbjct: 31454 gtgcacgccgattacgatgacaaa 31431
>gb|AC116336.2| Homo sapiens chromosome 5 clone CTD-2306L10, complete sequence Length = 145859 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 116 aagaaagaagcagaagaggaagga 139 |||||||||| ||||||||||||| Sbjct: 101390 aagaaagaagaagaagaggaagga 101413
>dbj|AK140840.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130041K16 product:unclassifiable, full insert sequence Length = 2998 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 aagcagaagaggaaggagag 142 |||||||||||||||||||| Sbjct: 386 aagcagaagaggaaggagag 367
>gb|AC022679.9| Homo sapiens chromosome 8, clone RP11-386G21, complete sequence Length = 160766 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 387 tcctccctcaccctcttccttcct 410 ||||||||||| |||||||||||| Sbjct: 66462 tcctccctcactctcttccttcct 66485
>gb|AC008125.9| Homo sapiens 12 BAC RPCI11-25E2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 189286 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 gaaagaagcagaagaggaag 137 |||||||||||||||||||| Sbjct: 36788 gaaagaagcagaagaggaag 36807
>gb|AC083902.5| Homo sapiens BAC clone RP11-766F14 from 4, complete sequence Length = 204860 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 103 aaaaacaaaagtaaagaaagaagcagaa 130 ||||| ||||||||||||||||| |||| Sbjct: 112695 aaaaaaaaaagtaaagaaagaagaagaa 112722
>gb|AC091198.6| Homo sapiens chromosome 18, clone RP11-258B16, complete sequence Length = 173237 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 cagccaaaaacaaaagtaaa 117 |||||||||||||||||||| Sbjct: 83574 cagccaaaaacaaaagtaaa 83593
>gb|AC024367.7| Homo sapiens chromosome 8, clone RP11-75G10, complete sequence Length = 170022 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 387 tcctccctcaccctcttccttcct 410 ||||||||| |||||||||||||| Sbjct: 74084 tcctccctccccctcttccttcct 74107
>gb|AC078948.11| Oryza sativa chromosome 10 BAC OSJNBa0001K12 genomic sequence, complete sequence Length = 144724 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 395 caccctcttccttcctcttc 414 |||||||||||||||||||| Sbjct: 114582 caccctcttccttcctcttc 114601
>gb|AC157924.6| Mus musculus chromosome 1, clone RP23-18J18, complete sequence Length = 206156 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 387 tcctccctcaccctcttccttcctcttc 414 ||||||||| ||||||||||||||||| Sbjct: 171155 tcctccctcttcctcttccttcctcttc 171128
>gb|AC125768.5| Rattus norvegicus X BAC CH230-211J9 (Children's Hospital Oakland Research Institute) complete sequence Length = 213348 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 tcctccctcaccctcttcct 406 |||||||||||||||||||| Sbjct: 2608 tcctccctcaccctcttcct 2627
>gb|BC062313.1| Homo sapiens myelin transcription factor 1, mRNA (cDNA clone MGC:71389 IMAGE:4301464), complete cds Length = 2077 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 agctgcagcagcagccccgg 333 |||||||||||||||||||| Sbjct: 1386 agctgcagcagcagccccgg 1405
>gb|AC158998.2| Mus musculus BAC clone RP24-290P19 from chromosome 9, complete sequence Length = 173036 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 115 aaagaaagaagcagaagaggaagg 138 ||||||||||| |||||||||||| Sbjct: 158538 aaagaaagaagaagaagaggaagg 158561
>gb|AC008522.6| Homo sapiens chromosome 5 clone CTC-463N11, complete sequence Length = 164462 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 caaaaacaaaagtaaagaaa 121 |||||||||||||||||||| Sbjct: 88258 caaaaacaaaagtaaagaaa 88277
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 caccctcttccttcctcttc 414 |||||||||||||||||||| Sbjct: 17077754 caccctcttccttcctcttc 17077735
>gb|AC008279.3| Homo sapiens BAC clone RP11-427F22 from 2, complete sequence Length = 157258 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 cctcttccttcctcttctcc 417 |||||||||||||||||||| Sbjct: 72227 cctcttccttcctcttctcc 72208
>gb|AC069145.5|AC069145 Oryza sativa chromosome 10 BAC OSJNBb0094K03 genomic sequence, complete sequence Length = 135216 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 caccctcttccttcctcttc 414 |||||||||||||||||||| Sbjct: 118246 caccctcttccttcctcttc 118227
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 337 cagcagcacgaacagcaccaccgcgatcacca 368 |||| |||||||||||||| |||||| ||||| Sbjct: 4783150 cagcggcacgaacagcaccgccgcgaccacca 4783181
>gb|AC093412.3| Homo sapiens chromosome 3 clone RP11-11L6, complete sequence Length = 178447 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 387 tcctccctcaccctcttccttcct 410 |||||||||| ||||||||||||| Sbjct: 108658 tcctccctcatcctcttccttcct 108635
>ref|XM_574839.1| PREDICTED: Rattus norvegicus hexosaminidase B (predicted) (Hexb_predicted), mRNA Length = 1677 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 ctgcagcagcagccccgggg 335 |||||||||||||||||||| Sbjct: 42 ctgcagcagcagccccgggg 23
>emb|BX901906.3| Mouse DNA sequence from clone RP23-328F9 on chromosome 2, complete sequence Length = 213629 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 cctcttccttcctcttctcc 417 |||||||||||||||||||| Sbjct: 164394 cctcttccttcctcttctcc 164413
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 acgaacagcaccaccgcgat 363 |||||||||||||||||||| Sbjct: 1442331 acgaacagcaccaccgcgat 1442350
>emb|BX571825.6| Zebrafish DNA sequence from clone DKEY-158E13 in linkage group 18, complete sequence Length = 200814 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 caaaaacaaaagtaaagaaa 121 |||||||||||||||||||| Sbjct: 181236 caaaaacaaaagtaaagaaa 181217
>emb|BX546483.5| Mouse DNA sequence from clone RP24-121F2 on chromosome X, complete sequence Length = 74439 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 aagaagcagaagaggaagga 139 |||||||||||||||||||| Sbjct: 52665 aagaagcagaagaggaagga 52646
>dbj|AB020642.1| Homo sapiens mRNA for KIAA0835 protein, partial cds Length = 5533 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 agctgcagcagcagccccgg 333 |||||||||||||||||||| Sbjct: 2426 agctgcagcagcagccccgg 2445
>ref|XM_316366.2| Anopheles gambiae str. PEST ENSANGP00000022675 (ENSANGG00000010539), partial mRNA Length = 1329 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 337 cagcagcacgaacagcaccaccgcgatc 364 ||||| ||||| |||||||||||||||| Sbjct: 462 cagcatcacgatcagcaccaccgcgatc 435
>ref|XM_316365.2| Anopheles gambiae str. PEST ENSANGP00000013028 (ENSANGG00000010539), partial mRNA Length = 1347 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 337 cagcagcacgaacagcaccaccgcgatc 364 ||||| ||||| |||||||||||||||| Sbjct: 582 cagcatcacgatcagcaccaccgcgatc 555
>ref|XM_311821.2| Anopheles gambiae str. PEST ENSANGP00000017562 (ENSANGG00000015073), partial mRNA Length = 1024 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 337 cagcagcacgaacagcacca 356 |||||||||||||||||||| Sbjct: 543 cagcagcacgaacagcacca 524
>dbj|AP001979.7| Homo sapiens genomic DNA, chromosome 11 clone:RP11-259P6, complete sequence Length = 147533 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 aaacaaaagtaaagaaagaa 124 |||||||||||||||||||| Sbjct: 62721 aaacaaaagtaaagaaagaa 62702
>emb|CR926298.2| Xenopus tropicalis finished cDNA, clone TEgg043a17 Length = 3414 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 taaagaaagaagcagaagag 133 |||||||||||||||||||| Sbjct: 817 taaagaaagaagcagaagag 836
>gb|AC110206.21| Mus musculus chromosome 19, clone RP23-155H17, complete sequence Length = 199583 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 tcctccctcaccctcttcct 406 |||||||||||||||||||| Sbjct: 28326 tcctccctcaccctcttcct 28345
>gb|BC079376.1| Rattus norvegicus hexosaminidase B, mRNA (cDNA clone MGC:94872 IMAGE:7110247), complete cds Length = 1907 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 ctgcagcagcagccccgggg 335 |||||||||||||||||||| Sbjct: 116 ctgcagcagcagccccgggg 97
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 caccctcttccttcctcttc 414 |||||||||||||||||||| Sbjct: 17086794 caccctcttccttcctcttc 17086775
>ref|NM_001011946.1| Rattus norvegicus hexosaminidase B (Hexb), mRNA Length = 1907 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 ctgcagcagcagccccgggg 335 |||||||||||||||||||| Sbjct: 116 ctgcagcagcagccccgggg 97
>gb|AC139158.3| Mus musculus BAC clone RP24-77I7 from 8, complete sequence Length = 203921 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 390 tccctcaccctcttccttcctcttctcc 417 |||||| |||||||||||||||| |||| Sbjct: 179586 tccctctccctcttccttcctctcctcc 179613
>gb|AC135360.3| Mus musculus BAC clone RP24-396P4 from 10, complete sequence Length = 154276 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 tcctccctcaccctcttcct 406 |||||||||||||||||||| Sbjct: 27748 tcctccctcaccctcttcct 27767
>gb|AC132414.4| Mus musculus BAC clone RP23-383E9 from 12, complete sequence Length = 185894 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 389 ctccctcaccctcttccttcctct 412 ||||||| |||||||||||||||| Sbjct: 54562 ctccctctccctcttccttcctct 54585
>gb|AC116108.9| Mus musculus chromosome 5, clone RP23-465P13, complete sequence Length = 179033 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 cctcttccttcctcttctcc 417 |||||||||||||||||||| Sbjct: 74175 cctcttccttcctcttctcc 74156
>emb|AL683811.6| Mouse DNA sequence from clone RP23-291K22 on chromosome 4, complete sequence Length = 171213 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 agaagcagaagaggaaggag 140 |||||||||||||||||||| Sbjct: 114285 agaagcagaagaggaaggag 114266
>gb|AY623036.1| Rattus norvegicus clone S33-D hypothetical protein mRNA, partial cds Length = 1746 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 agaagcagaagaggaaggag 140 |||||||||||||||||||| Sbjct: 696 agaagcagaagaggaaggag 715
>emb|AL596446.11| Mouse DNA sequence from clone RP23-386E10 on chromosome 11, complete sequence Length = 191735 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 agaaagaagcagaagaggaa 136 |||||||||||||||||||| Sbjct: 149616 agaaagaagcagaagaggaa 149635
>emb|AL807816.7| Mouse DNA sequence from clone RP23-13H12 on chromosome X, complete sequence Length = 193219 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 aacaaaagtaaagaaagaag 125 |||||||||||||||||||| Sbjct: 172522 aacaaaagtaaagaaagaag 172503
>gb|M96980.1|HUMMYT1A Homo sapiens myelin transcription factor 1 (MTF1) mRNA, 3' end Length = 2623 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 agctgcagcagcagccccgg 333 |||||||||||||||||||| Sbjct: 874 agctgcagcagcagccccgg 893
>gb|AC122127.31| Mus musculus chromosome 1, clone RP24-401K1, complete sequence Length = 193324 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 cctcttccttcctcttctcc 417 |||||||||||||||||||| Sbjct: 64570 cctcttccttcctcttctcc 64589
>emb|AJ224810.1|DSAJ4810 Drosophila seguyi histone H2A-H2B intergenic spacer Length = 479 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 aagaagcagaagaggaaggagagc 143 ||||||| |||||||||||||||| Sbjct: 420 aagaagcggaagaggaaggagagc 443
>emb|AJ224811.1|DKAJ4811 Drosophila kikkawai histone H2A-H2B intergenic spacer Length = 496 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 aagaagcagaagaggaaggagagc 143 ||||||| |||||||||||||||| Sbjct: 437 aagaagcggaagaggaaggagagc 460
>gb|AC164630.6| Mus musculus 10 BAC RP23-153M4 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 187031 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 397 ccctcttccttcctcttctc 416 |||||||||||||||||||| Sbjct: 140001 ccctcttccttcctcttctc 140020
>emb|AL645535.16| Mouse DNA sequence from clone RP23-145G23 on chromosome 11, complete sequence Length = 161363 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 392 cctcaccctcttccttcctcttct 415 |||| ||||||||||||||||||| Sbjct: 137461 cctccccctcttccttcctcttct 137484 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,499,573 Number of Sequences: 3902068 Number of extensions: 5499573 Number of successful extensions: 154722 Number of sequences better than 10.0: 212 Number of HSP's better than 10.0 without gapping: 214 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 153087 Number of HSP's gapped (non-prelim): 1635 length of query: 460 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 438 effective length of database: 17,147,199,772 effective search space: 7510473500136 effective search space used: 7510473500136 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
