ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd26i03 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X57408.1|TAPSB0 Wheat PsbO mRNA for 33kDa oxygen evolving protein of photosystem II Length = 1217 Score = 297 bits (150), Expect = 8e-78 Identities = 203/220 (92%), Gaps = 8/220 (3%) Strand = Plus / Minus Query: 29 acacattgttgcctcgattctttcctctccaccgaccaacccacgtatgcatgcacaaaa 88 ||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||| || Sbjct: 1094 acacattgttgcctcgattgtttcctctccaccgatcaacccacgtacgcatgcacacaa 1035 Query: 89 gat--gagtatcttcacttctgctatgctctagttagactcgagctgcgcgtaccacaca 146 ||| || |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1034 gataggatcttcttcacttctgctctgctctagttagactcgagctgcgcgtaccacaca 975 Query: 147 ccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgacggctgcacg 206 |||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 974 ccctggatcttgacatccttgggcgcct------cgaggtcggtgtctgacggctgcacg 921 Query: 207 ctctcgaagacgcctatcacctcgccggtctccggcttgc 246 |||||||||||||| ||||||||||||||||||||||||| Sbjct: 920 ctctcgaagacgccgatcacctcgccggtctccggcttgc 881
>ref|NM_193698.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1002 Score = 188 bits (95), Expect = 6e-45 Identities = 116/123 (94%) Strand = Plus / Minus Query: 124 actcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccga 183 |||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| Sbjct: 1000 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 941 Query: 184 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 243 |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 940 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 881 Query: 244 tgc 246 ||| Sbjct: 880 tgc 878
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 188 bits (95), Expect = 6e-45 Identities = 116/123 (94%) Strand = Plus / Minus Query: 124 actcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccga 183 |||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| Sbjct: 17346636 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 17346577 Query: 184 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 243 |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 17346576 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 17346517 Query: 244 tgc 246 ||| Sbjct: 17346516 tgc 17346514
>dbj|AP003203.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1080D07 Length = 173856 Score = 188 bits (95), Expect = 6e-45 Identities = 116/123 (94%) Strand = Plus / Minus Query: 124 actcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccga 183 |||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| Sbjct: 112897 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 112838 Query: 184 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 243 |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 112837 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 112778 Query: 244 tgc 246 ||| Sbjct: 112777 tgc 112775
>dbj|AK119515.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-D11, full insert sequence Length = 1286 Score = 188 bits (95), Expect = 6e-45 Identities = 116/123 (94%) Strand = Plus / Minus Query: 124 actcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccga 183 |||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| Sbjct: 1065 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 1006 Query: 184 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 243 |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 1005 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 946 Query: 244 tgc 246 ||| Sbjct: 945 tgc 943
>dbj|AK119188.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-G10, full insert sequence Length = 1217 Score = 188 bits (95), Expect = 6e-45 Identities = 116/123 (94%) Strand = Plus / Minus Query: 124 actcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccga 183 |||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| Sbjct: 1072 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 1013 Query: 184 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 243 |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 1012 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 953 Query: 244 tgc 246 ||| Sbjct: 952 tgc 950
>dbj|AK119163.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-D09, full insert sequence Length = 1293 Score = 188 bits (95), Expect = 6e-45 Identities = 116/123 (94%) Strand = Plus / Minus Query: 124 actcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccga 183 |||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| Sbjct: 1072 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 1013 Query: 184 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 243 |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 1012 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 953 Query: 244 tgc 246 ||| Sbjct: 952 tgc 950
>dbj|AK104760.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-G12, full insert sequence Length = 1292 Score = 188 bits (95), Expect = 6e-45 Identities = 116/123 (94%) Strand = Plus / Minus Query: 124 actcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccga 183 |||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| Sbjct: 1069 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 1010 Query: 184 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 243 |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 1009 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 950 Query: 244 tgc 246 ||| Sbjct: 949 tgc 947
>dbj|AK104649.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-B02, full insert sequence Length = 1272 Score = 188 bits (95), Expect = 6e-45 Identities = 116/123 (94%) Strand = Plus / Minus Query: 124 actcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccga 183 |||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| Sbjct: 1049 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 990 Query: 184 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 243 |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 989 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 930 Query: 244 tgc 246 ||| Sbjct: 929 tgc 927
>dbj|AK104080.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-A06, full insert sequence Length = 1159 Score = 188 bits (95), Expect = 6e-45 Identities = 116/123 (94%) Strand = Plus / Minus Query: 124 actcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccga 183 |||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| Sbjct: 1049 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 990 Query: 184 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 243 |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 989 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 930 Query: 244 tgc 246 ||| Sbjct: 929 tgc 927
>dbj|AK103937.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-G02, full insert sequence Length = 1290 Score = 188 bits (95), Expect = 6e-45 Identities = 116/123 (94%) Strand = Plus / Minus Query: 124 actcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccga 183 |||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| Sbjct: 1069 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 1010 Query: 184 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 243 |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 1009 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 950 Query: 244 tgc 246 ||| Sbjct: 949 tgc 947
>dbj|AK103920.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-B04, full insert sequence Length = 1313 Score = 188 bits (95), Expect = 6e-45 Identities = 116/123 (94%) Strand = Plus / Minus Query: 124 actcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccga 183 |||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| Sbjct: 1052 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 993 Query: 184 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 243 |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 992 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 933 Query: 244 tgc 246 ||| Sbjct: 932 tgc 930
>dbj|AK067715.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119C03, full insert sequence Length = 1332 Score = 188 bits (95), Expect = 6e-45 Identities = 116/123 (94%) Strand = Plus / Minus Query: 124 actcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccga 183 |||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| Sbjct: 1074 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 1015 Query: 184 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 243 |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 1014 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 955 Query: 244 tgc 246 ||| Sbjct: 954 tgc 952
>dbj|AK060886.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-B05, full insert sequence Length = 1208 Score = 188 bits (95), Expect = 6e-45 Identities = 116/123 (94%) Strand = Plus / Minus Query: 124 actcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccga 183 |||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| Sbjct: 1069 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 1010 Query: 184 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 243 |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 1009 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 950 Query: 244 tgc 246 ||| Sbjct: 949 tgc 947
>gb|AY109341.1| Zea mays CL4601_3 mRNA sequence Length = 1460 Score = 159 bits (80), Expect = 5e-36 Identities = 111/123 (90%) Strand = Plus / Minus Query: 124 actcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccga 183 |||||||||| |||||||| | ||||||||||||||||||||||||||||| |||| Sbjct: 1322 actcgagctgagcgtaccagannnnntggatcttgacatccttgggcgccttggccccga 1263 Query: 184 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 243 |||||||||| |||||||||||||||||||||||||| || ||||||||||||||||| | Sbjct: 1262 ggtcggtgtcggacggctgcacgctctcgaagacgccgatgacctcgccggtctccgggt 1203 Query: 244 tgc 246 ||| Sbjct: 1202 tgc 1200
>dbj|D21109.1|RICYK174 Oryza sativa mRNA for oxygen-evolving protein, partial sequence Length = 328 Score = 83.8 bits (42), Expect = 2e-13 Identities = 53/57 (92%) Strand = Plus / Minus Query: 128 gagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccgag 184 |||||||||||||||||| || ||||||||||||||||||||| |||| |||||||| Sbjct: 86 gagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttngcgccgag 30
>dbj|AP006108.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT11O06, TM0194, complete sequence Length = 108277 Score = 63.9 bits (32), Expect = 2e-07 Identities = 101/124 (81%) Strand = Plus / Plus Query: 123 gactcgagctgcgcgtaccacacaccctggatcttgacatccttgggcgccttggcgccg 182 ||||||||||| || ||||| || ||||||||||| |||||||| || || || || || Sbjct: 66564 gactcgagctgagcataccaaactccctggatcttcacatcctttggagctttcgctccc 66623 Query: 183 aggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggc 242 | || ||||| |||||||| | ||||||||| || || |||||||| ||||| || ||| Sbjct: 66624 aaatcagtgtcggacggctgaatgctctcgaacacaccaatcacctcaccggtatcaggc 66683 Query: 243 ttgc 246 |||| Sbjct: 66684 ttgc 66687 Score = 40.1 bits (20), Expect = 3.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 123 gactcgagctgcgcgtaccacacaccctggatcttgacatcctt 166 ||||| ||||| || ||||| || ||||||||||| |||||||| Sbjct: 55661 gactcaagctgagcataccaaactccctggatcttcacatcctt 55704
>emb|BX831411.1|CNS09ZD1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS88ZC06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1099 Score = 58.0 bits (29), Expect = 1e-05 Identities = 89/109 (81%) Strand = Plus / Minus Query: 138 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 197 |||||||| || |||||||| |||||||| || |||| || |||| ||| || || ||| Sbjct: 999 taccacaccccttggatcttcacatcctttggtaccttagcaccgaagtcagtatccgac 940 Query: 198 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgc 246 ||||| | |||||||| || || |||||||| || ||||||||||||| Sbjct: 939 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgc 891
>emb|Y15433.1|ATY15433 Arabidopsis thaliana psbO gene Length = 1520 Score = 58.0 bits (29), Expect = 1e-05 Identities = 89/109 (81%) Strand = Plus / Minus Query: 138 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 197 |||||||| || |||||||| |||||||| || |||| || || | ||| ||||| ||| Sbjct: 1400 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtgtccgac 1341 Query: 198 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgc 246 ||||| | |||||||| || || |||||||| || ||||||||||||| Sbjct: 1340 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgc 1292
>ref|NM_126055.2| Arabidopsis thaliana PSBO-1 (OXYGEN-EVOLVING ENHANCER 33) AT5G66570 (PSBO-1) mRNA, complete cds Length = 1239 Score = 50.1 bits (25), Expect = 0.003 Identities = 88/109 (80%) Strand = Plus / Minus Query: 138 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 197 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 1069 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 1010 Query: 198 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgc 246 ||||| | |||||||| || || |||||||| || ||||||||||||| Sbjct: 1009 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgc 961
>gb|BT015528.1| Arabidopsis thaliana At5g66570 mRNA sequence Length = 744 Score = 50.1 bits (25), Expect = 0.003 Identities = 88/109 (80%) Strand = Plus / Minus Query: 138 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 197 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 728 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 669 Query: 198 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgc 246 ||||| | |||||||| || || |||||||| || ||||||||||||| Sbjct: 668 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgc 620
>gb|BT000407.1| Arabidopsis thaliana 33 kDa polypeptide of oxygen-evolving complex (OEC) in photosystem II (At5g66570) mRNA, complete cds Length = 1031 Score = 50.1 bits (25), Expect = 0.003 Identities = 88/109 (80%) Strand = Plus / Minus Query: 138 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 197 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 983 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 924 Query: 198 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgc 246 ||||| | |||||||| || || |||||||| || ||||||||||||| Sbjct: 923 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgc 875
>gb|AY136291.1| Arabidopsis thaliana 33 kDa polypeptide of oxygen-evolving complex (OEC) in photosystem II (At5g66570) mRNA, complete cds Length = 1114 Score = 50.1 bits (25), Expect = 0.003 Identities = 88/109 (80%) Strand = Plus / Minus Query: 138 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 197 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 1028 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 969 Query: 198 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgc 246 ||||| | |||||||| || || |||||||| || ||||||||||||| Sbjct: 968 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgc 920
>gb|AY061924.1| Arabidopsis thaliana AT5g66570/K1F13_25 mRNA, complete cds Length = 999 Score = 50.1 bits (25), Expect = 0.003 Identities = 88/109 (80%) Strand = Plus / Minus Query: 138 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 197 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 983 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 924 Query: 198 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgc 246 ||||| | |||||||| || || |||||||| || ||||||||||||| Sbjct: 923 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgc 875
>gb|AF424626.1|AF424626 Arabidopsis thaliana AT5g66570/K1F13_25 mRNA, complete cds Length = 1141 Score = 50.1 bits (25), Expect = 0.003 Identities = 88/109 (80%) Strand = Plus / Minus Query: 138 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 197 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 1017 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 958 Query: 198 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgc 246 ||||| | |||||||| || || |||||||| || ||||||||||||| Sbjct: 957 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgc 909
>gb|AY056401.1| Arabidopsis thaliana AT5g66570/K1F13_25 mRNA, complete cds Length = 1156 Score = 50.1 bits (25), Expect = 0.003 Identities = 88/109 (80%) Strand = Plus / Minus Query: 138 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 197 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 1023 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 964 Query: 198 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgc 246 ||||| | |||||||| || || |||||||| || ||||||||||||| Sbjct: 963 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgc 915
>gb|AY054583.1| Arabidopsis thaliana 33 kDa polypeptide of oxygen-evolving complex (At5g66570; K1F13.25) mRNA, complete cds Length = 1118 Score = 50.1 bits (25), Expect = 0.003 Identities = 88/109 (80%) Strand = Plus / Minus Query: 138 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 197 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 1019 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 960 Query: 198 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgc 246 ||||| | |||||||| || || |||||||| || ||||||||||||| Sbjct: 959 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgc 911
>gb|AY052299.1| Arabidopsis thaliana AT5g66570/K1F13_25 mRNA, complete cds Length = 1132 Score = 50.1 bits (25), Expect = 0.003 Identities = 88/109 (80%) Strand = Plus / Minus Query: 138 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 197 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 1017 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 958 Query: 198 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgc 246 ||||| | |||||||| || || |||||||| || ||||||||||||| Sbjct: 957 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgc 909
>gb|AF372898.1|AF372898 Arabidopsis thaliana AT5g66570/K1F13_25 mRNA, complete cds Length = 1150 Score = 50.1 bits (25), Expect = 0.003 Identities = 88/109 (80%) Strand = Plus / Minus Query: 138 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 197 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 1017 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 958 Query: 198 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgc 246 ||||| | |||||||| || || |||||||| || ||||||||||||| Sbjct: 957 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgc 909
>emb|BX830796.1|CNS09ZFE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS24ZC09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1499 Score = 50.1 bits (25), Expect = 0.003 Identities = 88/109 (80%) Strand = Plus / Minus Query: 138 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 197 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 1399 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 1340 Query: 198 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgc 246 ||||| | |||||||| || || |||||||| || ||||||||||||| Sbjct: 1339 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgc 1291
>emb|BX831462.1|CNS09ZGC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS93ZC11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1099 Score = 50.1 bits (25), Expect = 0.003 Identities = 88/109 (80%) Strand = Plus / Minus Query: 138 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 197 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 1008 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 949 Query: 198 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgc 246 ||||| | |||||||| || || |||||||| || ||||||||||||| Sbjct: 948 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgc 900
>gb|AY087630.1| Arabidopsis thaliana clone 37218 mRNA, complete sequence Length = 1202 Score = 50.1 bits (25), Expect = 0.003 Identities = 88/109 (80%) Strand = Plus / Minus Query: 138 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 197 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 1069 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 1010 Query: 198 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgc 246 ||||| | |||||||| || || |||||||| || ||||||||||||| Sbjct: 1009 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgc 961
>dbj|AB013389.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K1F13 Length = 83511 Score = 50.1 bits (25), Expect = 0.003 Identities = 88/109 (80%) Strand = Plus / Minus Query: 138 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 197 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 59024 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 58965 Query: 198 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgc 246 ||||| | |||||||| || || |||||||| || ||||||||||||| Sbjct: 58964 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgc 58916
>emb|X52428.1|ATOEP A.thaliana mRNA for 33 kDa oxygen-evolving protein Length = 1140 Score = 50.1 bits (25), Expect = 0.003 Identities = 88/109 (80%) Strand = Plus / Minus Query: 138 taccacacaccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgac 197 |||||||| || |||||||| |||||||| || |||| || || | ||| || || ||| Sbjct: 1016 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 957 Query: 198 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgc 246 ||||| | |||||||| || || |||||||| || ||||||||||||| Sbjct: 956 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgc 908
>dbj|AB043960.2| Bruguiera gymnorrhiza psbO mRNA for oxygen evolving enhancer protein 1 precursor, complete cds Length = 1102 Score = 48.1 bits (24), Expect = 0.013 Identities = 81/100 (81%) Strand = Plus / Minus Query: 147 ccctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgacggctgcacg 206 |||||||||||||||||||| || |||| || || | || ||||| || || |||| | Sbjct: 980 ccctggatcttgacatccttagggacctttgctcccaaatcagtgtcagatggttgcagg 921 Query: 207 ctctcgaagacgcctatcacctcgccggtctccggcttgc 246 |||||||| || || || ||||| |||||||| ||||||| Sbjct: 920 ctctcgaacactccaataacctctccggtctcaggcttgc 881
>gb|AC164105.4| Mus musculus BAC clone RP23-433B2 from chromosome 9, complete sequence Length = 215089 Score = 46.1 bits (23), Expect = 0.052 Identities = 29/31 (93%) Strand = Plus / Minus Query: 3 ggttttatactagcatacacacacaaacaca 33 ||||| ||||||||||||||||||| ||||| Sbjct: 164218 ggtttgatactagcatacacacacacacaca 164188
>gb|AY456395.1| 'Chlorella' ellipsoidea oxygen-evolving enhancer protein 1 mRNA, partial cds Length = 817 Score = 46.1 bits (23), Expect = 0.052 Identities = 44/51 (86%) Strand = Plus / Minus Query: 152 gatcttgacatccttgggcgccttggcgccgaggtcggtgtctgacggctg 202 |||||||||||||||||| ||||||| || ||||| ||||| || ||||| Sbjct: 489 gatcttgacatccttgggggccttggaccccaggtctgtgtcagagggctg 439
>gb|AC103986.4| Homo sapiens, clone RP11-197M8, complete sequence Length = 160981 Score = 46.1 bits (23), Expect = 0.052 Identities = 26/27 (96%) Strand = Plus / Minus Query: 8 tatactagcatacacacacaaacacat 34 ||||||| ||||||||||||||||||| Sbjct: 130845 tatactaccatacacacacaaacacat 130819
>gb|AC009432.7|AC009432 Homo sapiens chromosome 15, clone RP11-57P19, complete sequence Length = 199609 Score = 46.1 bits (23), Expect = 0.052 Identities = 26/27 (96%) Strand = Plus / Plus Query: 8 tatactagcatacacacacaaacacat 34 ||||||| ||||||||||||||||||| Sbjct: 120993 tatactaccatacacacacaaacacat 121019
>gb|AC099601.6| Mus musculus chromosome 7, clone RP23-240K1, complete sequence Length = 252659 Score = 44.1 bits (22), Expect = 0.20 Identities = 22/22 (100%) Strand = Plus / Plus Query: 16 catacacacacaaacacattgt 37 |||||||||||||||||||||| Sbjct: 110152 catacacacacaaacacattgt 110173
>emb|AL031595.4|HS671O14 Human DNA sequence from clone RP4-671O14 on chromosome 22q13.2-13.33, complete sequence Length = 102739 Score = 44.1 bits (22), Expect = 0.20 Identities = 22/22 (100%) Strand = Plus / Minus Query: 12 ctagcatacacacacaaacaca 33 |||||||||||||||||||||| Sbjct: 90519 ctagcatacacacacaaacaca 90498
>gb|AC155333.5| Mus musculus 6 BAC RP24-475M8 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 189462 Score = 44.1 bits (22), Expect = 0.20 Identities = 25/26 (96%) Strand = Plus / Minus Query: 9 atactagcatacacacacaaacacat 34 |||| ||||||||||||||||||||| Sbjct: 42004 atacaagcatacacacacaaacacat 41979
>dbj|AP003144.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0507H06 Length = 136351 Score = 44.1 bits (22), Expect = 0.20 Identities = 22/22 (100%) Strand = Plus / Minus Query: 124 actcgagctgcgcgtaccacac 145 |||||||||||||||||||||| Sbjct: 28 actcgagctgcgcgtaccacac 7
>emb|CT030636.13| Mouse DNA sequence from clone RP23-432O2 on chromosome 17, complete sequence Length = 204320 Score = 44.1 bits (22), Expect = 0.20 Identities = 22/22 (100%) Strand = Plus / Minus Query: 14 agcatacacacacaaacacatt 35 |||||||||||||||||||||| Sbjct: 51641 agcatacacacacaaacacatt 51620
>gb|AC116804.22| Mus musculus chromosome 17, clone RP24-343C24, complete sequence Length = 186153 Score = 44.1 bits (22), Expect = 0.20 Identities = 22/22 (100%) Strand = Plus / Minus Query: 14 agcatacacacacaaacacatt 35 |||||||||||||||||||||| Sbjct: 77460 agcatacacacacaaacacatt 77439
>gb|AC167817.4| Mus musculus BAC clone RP23-146N9 from chromosome 17, complete sequence Length = 213670 Score = 44.1 bits (22), Expect = 0.20 Identities = 22/22 (100%) Strand = Plus / Minus Query: 14 agcatacacacacaaacacatt 35 |||||||||||||||||||||| Sbjct: 145008 agcatacacacacaaacacatt 144987
>gb|AC118547.41| Mus musculus strain C57BL/6J clone rp23-3g4 map 17, complete sequence Length = 234061 Score = 44.1 bits (22), Expect = 0.20 Identities = 22/22 (100%) Strand = Plus / Plus Query: 14 agcatacacacacaaacacatt 35 |||||||||||||||||||||| Sbjct: 18832 agcatacacacacaaacacatt 18853
>gb|AC161519.11| Mus musculus chromosome 18, clone RP24-83L9, complete sequence Length = 233631 Score = 42.1 bits (21), Expect = 0.81 Identities = 21/21 (100%) Strand = Plus / Minus Query: 14 agcatacacacacaaacacat 34 ||||||||||||||||||||| Sbjct: 151698 agcatacacacacaaacacat 151678
>gb|AC129943.8| Mus musculus chromosome 5, clone RP23-410M21, complete sequence Length = 178544 Score = 42.1 bits (21), Expect = 0.81 Identities = 24/25 (96%) Strand = Plus / Minus Query: 9 atactagcatacacacacaaacaca 33 ||||| ||||||||||||||||||| Sbjct: 151395 atacttgcatacacacacaaacaca 151371
>gb|AC147721.6| Mus musculus chromosome 10, clone RP24-250J7, complete sequence Length = 70656 Score = 42.1 bits (21), Expect = 0.81 Identities = 24/25 (96%) Strand = Plus / Minus Query: 17 atacacacacaaacacattgttgcc 41 ||||||||||| ||||||||||||| Sbjct: 66999 atacacacacatacacattgttgcc 66975
>gb|AC184800.2| Pan troglodytes chromosome X clone PTB-18K16 map human ortholog p11.23, complete sequence Length = 142154 Score = 42.1 bits (21), Expect = 0.81 Identities = 21/21 (100%) Strand = Plus / Plus Query: 13 tagcatacacacacaaacaca 33 ||||||||||||||||||||| Sbjct: 116709 tagcatacacacacaaacaca 116729
>gb|AY071483.1| Drosophila melanogaster RE55321 full insert cDNA Length = 952 Score = 42.1 bits (21), Expect = 0.81 Identities = 21/21 (100%) Strand = Plus / Minus Query: 146 accctggatcttgacatcctt 166 ||||||||||||||||||||| Sbjct: 131 accctggatcttgacatcctt 111
>gb|AC132610.3| Mus musculus BAC clone RP23-374N15 from chromosome 6, complete sequence Length = 195587 Score = 42.1 bits (21), Expect = 0.81 Identities = 21/21 (100%) Strand = Plus / Minus Query: 19 acacacacaaacacattgttg 39 ||||||||||||||||||||| Sbjct: 125345 acacacacaaacacattgttg 125325
>gb|AC095904.7| Rattus norvegicus 9 BAC CH230-10L20 (Children's Hospital Oakland Research Institute) complete sequence Length = 212732 Score = 42.1 bits (21), Expect = 0.81 Identities = 21/21 (100%) Strand = Plus / Plus Query: 13 tagcatacacacacaaacaca 33 ||||||||||||||||||||| Sbjct: 31304 tagcatacacacacaaacaca 31324
>emb|AL022578.1|HS393P12 Human DNA sequence from clone RP3-393P12 on chromosome Xp11.21 Contains a C2H2 type zinc finger pseudogene, a WAS protein family member 2 (WASF2) pseudogene (LOC286404), a ribosomal protein L7 (RPL7) pseudogene and the 5' end of a gene for a novel zinc finger protein, complete sequence Length = 104597 Score = 42.1 bits (21), Expect = 0.81 Identities = 21/21 (100%) Strand = Plus / Plus Query: 13 tagcatacacacacaaacaca 33 ||||||||||||||||||||| Sbjct: 19937 tagcatacacacacaaacaca 19957
>emb|AL596022.12| Zebrafish DNA sequence from clone BUSM1-107O16 in linkage group 17 Contains part of a novel gene for a protein similar to vertebrate anaplastic lymphoma kinase (ALK) and leukocyte tyrosine kinase receptor prescursor (LTK or TYK1) and part of a novel gene for a protein similar to vertebrate inositol 1,4,5-triphosphate 3-kinase (ITPKA), complete sequence Length = 121941 Score = 42.1 bits (21), Expect = 0.81 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 acacacacaaacacattgttg 39 ||||||||||||||||||||| Sbjct: 38879 acacacacaaacacattgttg 38899
>emb|AL805944.8| Mouse DNA sequence from clone RP24-387A5 on chromosome 4 Contains a novel pseudogene, complete sequence Length = 195873 Score = 42.1 bits (21), Expect = 0.81 Identities = 21/21 (100%) Strand = Plus / Minus Query: 13 tagcatacacacacaaacaca 33 ||||||||||||||||||||| Sbjct: 138562 tagcatacacacacaaacaca 138542
>gb|DQ122908.1| Chlamydomonas incerta chloroplast oxygen-evolving enhancer protein 1 (Psb1) mRNA, complete cds; nuclear gene for chloroplast product Length = 1213 Score = 42.1 bits (21), Expect = 0.81 Identities = 36/41 (87%) Strand = Plus / Minus Query: 162 tccttgggcgccttggcgccgaggtcggtgtctgacggctg 202 |||||||| ||||||||||| ||||| ||||| || ||||| Sbjct: 857 tccttgggggccttggcgcccaggtcagtgtccgagggctg 817
>ref|NM_143543.2| Drosophila melanogaster Jonah 99Fi CG18030-RA (Jon99Fi), mRNA Length = 939 Score = 42.1 bits (21), Expect = 0.81 Identities = 21/21 (100%) Strand = Plus / Minus Query: 146 accctggatcttgacatcctt 166 ||||||||||||||||||||| Sbjct: 131 accctggatcttgacatcctt 111
>ref|NM_143542.1| Drosophila melanogaster Jonah 99Fii CG2229-RA (Jon99Fii), mRNA Length = 914 Score = 42.1 bits (21), Expect = 0.81 Identities = 21/21 (100%) Strand = Plus / Minus Query: 146 accctggatcttgacatcctt 166 ||||||||||||||||||||| Sbjct: 131 accctggatcttgacatcctt 111
>gb|AY070585.1| Drosophila melanogaster RE68767 full length cDNA Length = 937 Score = 42.1 bits (21), Expect = 0.81 Identities = 21/21 (100%) Strand = Plus / Minus Query: 146 accctggatcttgacatcctt 166 ||||||||||||||||||||| Sbjct: 132 accctggatcttgacatcctt 112
>gb|AY069737.1| Drosophila melanogaster LP05501 full length cDNA Length = 4651 Score = 42.1 bits (21), Expect = 0.81 Identities = 21/21 (100%) Strand = Plus / Minus Query: 146 accctggatcttgacatcctt 166 ||||||||||||||||||||| Sbjct: 3832 accctggatcttgacatcctt 3812
>emb|BX539317.4| Zebrafish DNA sequence from clone DKEY-170L10 in linkage group 17, complete sequence Length = 117893 Score = 42.1 bits (21), Expect = 0.81 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 acacacacaaacacattgttg 39 ||||||||||||||||||||| Sbjct: 35597 acacacacaaacacattgttg 35617
>gb|AY220076.1| Nicotiana tabacum oxygen evolving complex 33 kDa photosystem II protein (PsbO) mRNA, complete cds; nuclear gene for chloroplast product Length = 1263 Score = 42.1 bits (21), Expect = 0.81 Identities = 81/101 (80%) Strand = Plus / Minus Query: 146 accctggatcttgacatccttgggcgccttggcgccgaggtcggtgtctgacggctgcac 205 ||||||||| || ||||||||||| |||| || ||||| || || || || ||||| | Sbjct: 991 accctggattttcacatccttggggacctttgcaccgagatcagtatcagatggctggat 932 Query: 206 gctctcgaagacgcctatcacctcgccggtctccggcttgc 246 |||||| || || || || ||||| |||||||| ||||||| Sbjct: 931 gctctcaaatactccaatgacctcaccggtctctggcttgc 891
>gb|AC024706.6| Homo sapiens BAC clone RP11-119J20 from 4, complete sequence Length = 169557 Score = 42.1 bits (21), Expect = 0.81 Identities = 21/21 (100%) Strand = Plus / Minus Query: 14 agcatacacacacaaacacat 34 ||||||||||||||||||||| Sbjct: 48660 agcatacacacacaaacacat 48640
>gb|AC008299.5|AC008299 Drosophila melanogaster, chromosome 3R, region 99F4-99F11, BAC clone BACR48G16, complete sequence Length = 173844 Score = 42.1 bits (21), Expect = 0.81 Identities = 21/21 (100%) Strand = Plus / Minus Query: 146 accctggatcttgacatcctt 166 ||||||||||||||||||||| Sbjct: 59864 accctggatcttgacatcctt 59844 Score = 42.1 bits (21), Expect = 0.81 Identities = 21/21 (100%) Strand = Plus / Plus Query: 146 accctggatcttgacatcctt 166 ||||||||||||||||||||| Sbjct: 58565 accctggatcttgacatcctt 58585
>gb|AC012457.7| Homo sapiens BAC clone RP11-509E16 from 2, complete sequence Length = 95214 Score = 42.1 bits (21), Expect = 0.81 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 gcatacacacacaaacacatt 35 ||||||||||||||||||||| Sbjct: 94339 gcatacacacacaaacacatt 94319
>gb|AC012074.9| Homo sapiens BAC clone RP11-458N5 from 2, complete sequence Length = 197652 Score = 42.1 bits (21), Expect = 0.81 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 gcatacacacacaaacacatt 35 ||||||||||||||||||||| Sbjct: 1125 gcatacacacacaaacacatt 1105
>gb|AC154860.2| Mus musculus BAC clone RP23-9N20 from 13, complete sequence Length = 192309 Score = 42.1 bits (21), Expect = 0.81 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 gcatacacacacaaacacatt 35 ||||||||||||||||||||| Sbjct: 22835 gcatacacacacaaacacatt 22855
>gb|AC104892.10| Mus musculus chromosome 18, clone RP23-262H4, complete sequence Length = 190380 Score = 42.1 bits (21), Expect = 0.81 Identities = 21/21 (100%) Strand = Plus / Plus Query: 14 agcatacacacacaaacacat 34 ||||||||||||||||||||| Sbjct: 155039 agcatacacacacaaacacat 155059
>gb|AE003774.3| Drosophila melanogaster chromosome 3R, section 112 of 118 of the complete sequence Length = 239051 Score = 42.1 bits (21), Expect = 0.81 Identities = 21/21 (100%) Strand = Plus / Minus Query: 146 accctggatcttgacatcctt 166 ||||||||||||||||||||| Sbjct: 57447 accctggatcttgacatcctt 57427 Score = 42.1 bits (21), Expect = 0.81 Identities = 21/21 (100%) Strand = Plus / Plus Query: 146 accctggatcttgacatcctt 166 ||||||||||||||||||||| Sbjct: 56148 accctggatcttgacatcctt 56168
>dbj|AP002427.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-90I16, complete sequence Length = 154159 Score = 42.1 bits (21), Expect = 0.81 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 catacacacacaaacacattg 36 ||||||||||||||||||||| Sbjct: 63889 catacacacacaaacacattg 63909
>emb|CT009684.7| Mouse DNA sequence from clone RP23-127L21 on chromosome 13, complete sequence Length = 205067 Score = 42.1 bits (21), Expect = 0.81 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 gcatacacacacaaacacatt 35 ||||||||||||||||||||| Sbjct: 141959 gcatacacacacaaacacatt 141979
>emb|AL928553.8| Mouse DNA sequence from clone RP23-312N5 on chromosome 2, complete sequence Length = 148202 Score = 42.1 bits (21), Expect = 0.81 Identities = 24/25 (96%) Strand = Plus / Plus Query: 19 acacacacaaacacattgttgcctc 43 ||||||||| ||||||||||||||| Sbjct: 84913 acacacacacacacattgttgcctc 84937
>emb|AL845273.7| Mouse DNA sequence from clone RP23-334D15 on chromosome 2, complete sequence Length = 158861 Score = 42.1 bits (21), Expect = 0.81 Identities = 21/21 (100%) Strand = Plus / Minus Query: 13 tagcatacacacacaaacaca 33 ||||||||||||||||||||| Sbjct: 15056 tagcatacacacacaaacaca 15036
>gb|AC169669.1| Mus musculus chromosome 7, clone wi1-1415D6, complete sequence Length = 37683 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 catacacacacaaacacatt 35 |||||||||||||||||||| Sbjct: 16941 catacacacacaaacacatt 16922
>gb|AC168117.2| Mus musculus BAC clone RP23-461G13 from chromosome 17, complete sequence Length = 169205 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 gcatacacacacaaacacat 34 |||||||||||||||||||| Sbjct: 123007 gcatacacacacaaacacat 122988
>gb|AC165247.2| Mus musculus BAC clone RP24-213G21 from chromosome 13, complete sequence Length = 162597 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 agcatacacacacaaacaca 33 |||||||||||||||||||| Sbjct: 74510 agcatacacacacaaacaca 74491
>gb|AC163020.9| Mus musculus chromosome 7, clone RP23-36L11, complete sequence Length = 215384 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 gcatacacacacaaacacat 34 |||||||||||||||||||| Sbjct: 102720 gcatacacacacaaacacat 102739
>gb|AC131065.16| Mus musculus chromosome 18, clone RP23-21J21, complete sequence Length = 208270 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 gcatacacacacaaacacat 34 |||||||||||||||||||| Sbjct: 195461 gcatacacacacaaacacat 195442
>gb|AC130658.36| Mus musculus chromosome 1, clone RP23-309D5, complete sequence Length = 184094 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 gcatacacacacaaacacat 34 |||||||||||||||||||| Sbjct: 132602 gcatacacacacaaacacat 132621 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 gcatacacacacaaacacat 34 |||||||||||||||||||| Sbjct: 132495 gcatacacacacaaacacat 132514
>gb|AC161412.10| Mus musculus chromosome 7, clone RP24-78I5, complete sequence Length = 172087 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 gcatacacacacaaacacat 34 |||||||||||||||||||| Sbjct: 137657 gcatacacacacaaacacat 137676 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 catacacacacaaacacatt 35 |||||||||||||||||||| Sbjct: 11237 catacacacacaaacacatt 11218
>gb|CP000067.1| Trypanosoma brucei chromosome 4, complete sequence Length = 1590432 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 catacacacacaaacacatt 35 |||||||||||||||||||| Sbjct: 735714 catacacacacaaacacatt 735695
>gb|AC087606.2| Trypanosoma brucei chromosome 4 clone RPCI93-4J6, complete sequence Length = 37931 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 catacacacacaaacacatt 35 |||||||||||||||||||| Sbjct: 34424 catacacacacaaacacatt 34405
>gb|AC080131.9| Trypanosoma brucei chromosome 4 clone RPCI93-2H8, complete sequence Length = 163689 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 catacacacacaaacacatt 35 |||||||||||||||||||| Sbjct: 146865 catacacacacaaacacatt 146884
>gb|AC107679.19| Mus musculus chromosome 1, clone RP23-256H11, complete sequence Length = 168732 Score = 40.1 bits (20), Expect = 3.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 actagcatacacacacaaacacat 34 ||||||||||||||||| |||||| Sbjct: 129119 actagcatacacacacagacacat 129142
>gb|AC127756.4| Rattus norvegicus 16 BAC CH230-166D23 (Children's Hospital Oakland Research Institute) complete sequence Length = 176794 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 gcatacacacacaaacacat 34 |||||||||||||||||||| Sbjct: 172975 gcatacacacacaaacacat 172994
>gb|AC112155.3| Mus musculus BAC clone RP24-100G17 from chromosome 16, complete sequence Length = 169864 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 gcatacacacacaaacacat 34 |||||||||||||||||||| Sbjct: 89167 gcatacacacacaaacacat 89186
>gb|AC159638.2| Mus musculus BAC clone RP24-78C16 from chromosome 12, complete sequence Length = 190196 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 agcatacacacacaaacaca 33 |||||||||||||||||||| Sbjct: 152532 agcatacacacacaaacaca 152551
>gb|AC157994.2| Mus musculus BAC clone RP24-349B6 from chromosome 9, complete sequence Length = 226187 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 catacacacacaaacacatt 35 |||||||||||||||||||| Sbjct: 179648 catacacacacaaacacatt 179667
>gb|AC116392.12| Mus musculus chromosome 10, clone RP23-93D3, complete sequence Length = 275200 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 catacacacacaaacacatt 35 |||||||||||||||||||| Sbjct: 49213 catacacacacaaacacatt 49232
>gb|AC124552.3| Mus musculus BAC clone RP23-222M11 from chromosome 19, complete sequence Length = 237281 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 gcatacacacacaaacacat 34 |||||||||||||||||||| Sbjct: 63490 gcatacacacacaaacacat 63509
>gb|AC122882.4| Mus musculus BAC clone RP23-80M17 from chromosome 7, complete sequence Length = 260989 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 agcatacacacacaaacaca 33 |||||||||||||||||||| Sbjct: 170271 agcatacacacacaaacaca 170290
>gb|AC132092.3| Mus musculus BAC clone RP24-470A15 from chromosome 16, complete sequence Length = 174558 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 catacacacacaaacacatt 35 |||||||||||||||||||| Sbjct: 27628 catacacacacaaacacatt 27647
>gb|AC126257.4| Mus musculus BAC clone RP24-247A8 from chromosome 9, complete sequence Length = 174764 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 gcatacacacacaaacacat 34 |||||||||||||||||||| Sbjct: 58645 gcatacacacacaaacacat 58664
>gb|AC134331.2| Mus musculus BAC clone RP24-344O12 from chromosome 19, complete sequence Length = 155342 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 gcatacacacacaaacacat 34 |||||||||||||||||||| Sbjct: 113770 gcatacacacacaaacacat 113789
>gb|AC123056.4| Mus musculus BAC clone RP23-182H4 from chromosome 13, complete sequence Length = 183076 Score = 40.1 bits (20), Expect = 3.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 9 atactagcatacacacacaaacacattg 36 ||||| ||||||||||||| |||||||| Sbjct: 4261 atacttgcatacacacacatacacattg 4234
>gb|AC118020.11| Mus musculus, clone RP23-459B19, complete sequence Length = 191669 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 catacacacacaaacacatt 35 |||||||||||||||||||| Sbjct: 46454 catacacacacaaacacatt 46435
>gb|AC073590.5| Mus musculus chromosome 12 clone RP23-206K17, complete sequence Length = 204107 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 gcatacacacacaaacacat 34 |||||||||||||||||||| Sbjct: 82319 gcatacacacacaaacacat 82300
>gb|AC123857.4| Mus musculus BAC clone RP23-344L21 from chromosome 13, complete sequence Length = 192371 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 gcatacacacacaaacacat 34 |||||||||||||||||||| Sbjct: 19427 gcatacacacacaaacacat 19408
>gb|AC092089.2| Danio rerio clone 85I7, complete sequence Length = 62442 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 acacacacaaacacattgtt 38 |||||||||||||||||||| Sbjct: 7761 acacacacaaacacattgtt 7780
>emb|AL441963.7| Human DNA sequence from clone RP11-280O24 on chromosome 9 Contains a ATP synthase, H+ transporting, mitochondrial F0 complex, subunit d (ATP5H) (ATPQ, ATP5JD) pseudogene, the 3' end of the NFIB gene for nuclear factor I/B (NFIB2, NFIB3, NFI-RED) and a ribosomal protein L7a (RPL7A) pseudogene, complete sequence Length = 159476 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 gcatacacacacaaacacat 34 |||||||||||||||||||| Sbjct: 34181 gcatacacacacaaacacat 34200
>gb|AC121601.4| Mus musculus BAC clone RP23-305F2 from 1, complete sequence Length = 190653 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 catacacacacaaacacatt 35 |||||||||||||||||||| Sbjct: 36485 catacacacacaaacacatt 36504
>gb|AC115120.4| Mus musculus BAC clone RP23-116M23 from 16, complete sequence Length = 222066 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 catacacacacaaacacatt 35 |||||||||||||||||||| Sbjct: 6244 catacacacacaaacacatt 6225
>gb|AC117217.2| Mus musculus BAC clone RP23-318C3 from 17, complete sequence Length = 199711 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 gcatacacacacaaacacat 34 |||||||||||||||||||| Sbjct: 74154 gcatacacacacaaacacat 74135
>gb|AC023141.6| Homo sapiens BAC clone RP11-548K12 from 7, complete sequence Length = 197637 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 gcatacacacacaaacacat 34 |||||||||||||||||||| Sbjct: 115539 gcatacacacacaaacacat 115520
>gb|AC119996.7| Mus musculus chromosome 19, clone RP24-120D1, complete sequence Length = 172160 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 gcatacacacacaaacacat 34 |||||||||||||||||||| Sbjct: 150708 gcatacacacacaaacacat 150689
>gb|AC117629.16| Mus musculus chromosome 19, clone RP23-179C21, complete sequence Length = 248718 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 gcatacacacacaaacacat 34 |||||||||||||||||||| Sbjct: 28105 gcatacacacacaaacacat 28086
>gb|AC124230.6| Mus musculus chromosome 1, clone RP23-474K11, complete sequence Length = 202996 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 agcatacacacacaaacaca 33 |||||||||||||||||||| Sbjct: 170050 agcatacacacacaaacaca 170031
>gb|AC131390.3| Homo sapiens chromosome 16 clone RP11-349E19, complete sequence Length = 199827 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 gcatacacacacaaacacat 34 |||||||||||||||||||| Sbjct: 155785 gcatacacacacaaacacat 155766
>emb|AL844175.17| Human DNA sequence from clone XXyac-29IB3 on chromosome X Contains a novel gene and gene FLJ30416, complete sequence Length = 67853 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 catacacacacaaacacatt 35 |||||||||||||||||||| Sbjct: 63027 catacacacacaaacacatt 63046
>emb|AL592430.8| Human DNA sequence from clone RP11-388P9 on chromosome 10 Contains part of the ANK3 gene for ankyrin 3, node of Ranvier (ankyrin G) and a novel gene, complete sequence Length = 145136 Score = 40.1 bits (20), Expect = 3.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 95 tatcttcacttctgctatgctctagtta 122 ||||| |||||||||| ||||||||||| Sbjct: 137608 tatctgcacttctgctgtgctctagtta 137635
>gb|AC091514.2| Rattus norvegicus strain Brown Norway clone RP31-223K12, complete sequence Length = 148370 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 catacacacacaaacacatt 35 |||||||||||||||||||| Sbjct: 43989 catacacacacaaacacatt 43970
>emb|AL136324.6| Human DNA sequence from clone RP5-944H6 on chromosome 1p22.3-31.2 Contains the 3' end of the PTGFR gene for prostaglandin, complete sequence Length = 135758 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 agcatacacacacaaacaca 33 |||||||||||||||||||| Sbjct: 8190 agcatacacacacaaacaca 8171
>emb|CR628395.7| Zebrafish DNA sequence from clone DKEY-165E24, complete sequence Length = 250797 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 cacacacaaacacattgttg 39 |||||||||||||||||||| Sbjct: 160427 cacacacaaacacattgttg 160408
>emb|AL645943.19| Mouse DNA sequence from clone RP23-130E22 on chromosome 11 Contains a prohibitin (Phb) pseudogene and a novel gene, complete sequence Length = 213383 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 catacacacacaaacacatt 35 |||||||||||||||||||| Sbjct: 205613 catacacacacaaacacatt 205594
>emb|AL662908.7| Mouse DNA sequence from clone RP23-478O10 on chromosome 11 Contains two NACHT, leucine rich repeat and PYD containing 1 (NALP1) pseudogenes, complete sequence Length = 96115 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 catacacacacaaacacatt 35 |||||||||||||||||||| Sbjct: 73131 catacacacacaaacacatt 73112
>emb|CR450726.6| Zebrafish DNA sequence from clone CH211-149F21 in linkage group 5, complete sequence Length = 93211 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 gcatacacacacaaacacat 34 |||||||||||||||||||| Sbjct: 72056 gcatacacacacaaacacat 72037
>emb|BX511166.9| Zebrafish DNA sequence from clone RP71-84B10 in linkage group 13, complete sequence Length = 152870 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 gcatacacacacaaacacat 34 |||||||||||||||||||| Sbjct: 41619 gcatacacacacaaacacat 41600
>emb|BX469911.9| Zebrafish DNA sequence from clone DKEY-13K9 in linkage group 5, complete sequence Length = 226730 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 catacacacacaaacacatt 35 |||||||||||||||||||| Sbjct: 102050 catacacacacaaacacatt 102069
>emb|BX901938.5| Zebrafish DNA sequence from clone CH211-254D18 in linkage group 1, complete sequence Length = 104059 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 agcatacacacacaaacaca 33 |||||||||||||||||||| Sbjct: 88852 agcatacacacacaaacaca 88871
>gb|AC117385.3| Homo sapiens 3 BAC RP11-13I22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 168186 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 gcatacacacacaaacacat 34 |||||||||||||||||||| Sbjct: 121745 gcatacacacacaaacacat 121764
>gb|DQ397600.1| Cenarchaeum symbiosum clone C07B08, complete sequence Length = 41295 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 ctggatcttgacatccttgg 168 |||||||||||||||||||| Sbjct: 19307 ctggatcttgacatccttgg 19288
>gb|DQ397575.1| Cenarchaeum symbiosum clone C11D05, complete sequence Length = 41867 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 ctggatcttgacatccttgg 168 |||||||||||||||||||| Sbjct: 36770 ctggatcttgacatccttgg 36751
>emb|CR623257.1| full-length cDNA clone CS0DI060YJ02 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1759 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 catacacacacaaacacatt 35 |||||||||||||||||||| Sbjct: 1469 catacacacacaaacacatt 1450
>emb|CR622234.1| full-length cDNA clone CS0DI014YN07 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1837 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 catacacacacaaacacatt 35 |||||||||||||||||||| Sbjct: 1485 catacacacacaaacacatt 1466
>gb|AC093452.50| Mus musculus strain C57BL/6J clone rp23-458j13 map 1, complete sequence Length = 199859 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 catacacacacaaacacatt 35 |||||||||||||||||||| Sbjct: 38351 catacacacacaaacacatt 38370
>dbj|AK091686.1| Homo sapiens cDNA FLJ34367 fis, clone FEBRA2016621 Length = 2256 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 gcatacacacacaaacacat 34 |||||||||||||||||||| Sbjct: 1082 gcatacacacacaaacacat 1063
>gb|AC078958.30| Homo sapiens X BAC RP11-609C15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 187547 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 catacacacacaaacacatt 35 |||||||||||||||||||| Sbjct: 66938 catacacacacaaacacatt 66919
>gb|AC107463.5| Homo sapiens BAC clone RP11-553P9 from 4, complete sequence Length = 93661 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 gcatacacacacaaacacat 34 |||||||||||||||||||| Sbjct: 81651 gcatacacacacaaacacat 81632
>dbj|AB073392.1| Homo sapiens primary neuroblastoma cDNA, clone:Nbla03771, full insert sequence Length = 2116 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 gcatacacacacaaacacat 34 |||||||||||||||||||| Sbjct: 937 gcatacacacacaaacacat 918
>gb|AC093896.3| Homo sapiens BAC clone RP11-719N9 from 4, complete sequence Length = 156177 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 catacacacacaaacacatt 35 |||||||||||||||||||| Sbjct: 122450 catacacacacaaacacatt 122469
>gb|AC091577.9| Homo sapiens chromosome 18, clone RP11-704J2, complete sequence Length = 158840 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 catacacacacaaacacatt 35 |||||||||||||||||||| Sbjct: 114159 catacacacacaaacacatt 114140
>gb|AC022893.6| Homo sapiens chromosome 8, clone RP11-531A24, complete sequence Length = 175229 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 gcatacacacacaaacacat 34 |||||||||||||||||||| Sbjct: 131298 gcatacacacacaaacacat 131317
>emb|BX571849.18| Zebrafish DNA sequence from clone DKEY-185N1 in linkage group 2, complete sequence Length = 128844 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 agcatacacacacaaacaca 33 |||||||||||||||||||| Sbjct: 66654 agcatacacacacaaacaca 66673
>gb|AC156551.5| Mus musculus chromosome 8, clone RP23-348E18, complete sequence Length = 207944 Score = 40.1 bits (20), Expect = 3.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 15 gcatacacacacaaacacattgttgcct 42 ||||||||||||| ||||| |||||||| Sbjct: 101400 gcatacacacacagacacactgttgcct 101427
>gb|AC137711.21| Mus musculus chromosome 5, clone RP23-282A16, complete sequence Length = 181459 Score = 40.1 bits (20), Expect = 3.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 actagcatacacacacaaacacat 34 |||| ||||||||||||||||||| Sbjct: 136740 actaacatacacacacaaacacat 136717
>gb|AC136742.15| Mus musculus chromosome 5, clone RP23-145H8, complete sequence Length = 197131 Score = 40.1 bits (20), Expect = 3.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 actagcatacacacacaaacacat 34 |||| ||||||||||||||||||| Sbjct: 1890 actaacatacacacacaaacacat 1867
>gb|AC159899.2| Mus musculus BAC clone RP23-114N1 from chromosome 9, complete sequence Length = 198173 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 catacacacacaaacacatt 35 |||||||||||||||||||| Sbjct: 32103 catacacacacaaacacatt 32122
>dbj|AK041666.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630028N07 product:unclassifiable, full insert sequence Length = 3306 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 catacacacacaaacacatt 35 |||||||||||||||||||| Sbjct: 2816 catacacacacaaacacatt 2835
>gb|AC015963.8|AC015963 Homo sapiens chromosome , clone RP11-112B21, complete sequence Length = 172657 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 catacacacacaaacacatt 35 |||||||||||||||||||| Sbjct: 97377 catacacacacaaacacatt 97396
>emb|BX830360.1|CNS0A01E Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB75ZG08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1088 Score = 40.1 bits (20), Expect = 3.2 Identities = 35/40 (87%) Strand = Plus / Minus Query: 207 ctctcgaagacgcctatcacctcgccggtctccggcttgc 246 |||||||| || || |||||||| || ||||||||||||| Sbjct: 947 ctctcgaacactccgatcacctctcctgtctccggcttgc 908
>gb|AC068492.2| Homo sapiens BAC clone RP11-809C23 from 2, complete sequence Length = 172281 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 agcatacacacacaaacaca 33 |||||||||||||||||||| Sbjct: 76667 agcatacacacacaaacaca 76686
>gb|AC154337.2| Mus musculus BAC clone RP23-254P20 from chromosome 17, complete sequence Length = 182101 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 catacacacacaaacacatt 35 |||||||||||||||||||| Sbjct: 21366 catacacacacaaacacatt 21385
>gb|AC009498.4| Homo sapiens BAC clone RP11-507C18 from 2, complete sequence Length = 199954 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 ttgcctcgattctttcctct 56 |||||||||||||||||||| Sbjct: 120467 ttgcctcgattctttcctct 120448
>gb|AC007380.3| Homo sapiens BAC clone RP11-150O13 from 2, complete sequence Length = 207362 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 gcatacacacacaaacacat 34 |||||||||||||||||||| Sbjct: 198533 gcatacacacacaaacacat 198552
>gb|AC084357.23| Homo sapiens 12q BAC RP11-415I12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 188527 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 catacacacacaaacacatt 35 |||||||||||||||||||| Sbjct: 49238 catacacacacaaacacatt 49257
>gb|AC125796.2| Homo sapiens chromosome 16 clone RP11-420N3, complete sequence Length = 162666 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 gcatacacacacaaacacat 34 |||||||||||||||||||| Sbjct: 147938 gcatacacacacaaacacat 147957
>emb|BX569780.6| Zebrafish DNA sequence from clone CH211-134A17 in linkage group 10, complete sequence Length = 187807 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 gcatacacacacaaacacat 34 |||||||||||||||||||| Sbjct: 70572 gcatacacacacaaacacat 70553
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 cgccttggcgccgaggtcgg 189 |||||||||||||||||||| Sbjct: 3379461 cgccttggcgccgaggtcgg 3379480
>emb|AL935299.11| Zebrafish DNA sequence from clone DKEY-38M5, complete sequence Length = 229574 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 catacacacacaaacacatt 35 |||||||||||||||||||| Sbjct: 158180 catacacacacaaacacatt 158161
>emb|BX647419.1|HSM807564 Homo sapiens mRNA; cDNA DKFZp686O19124 (from clone DKFZp686O19124) Length = 1973 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 catacacacacaaacacatt 35 |||||||||||||||||||| Sbjct: 1565 catacacacacaaacacatt 1546
>emb|AL671898.7| Mouse DNA sequence from clone RP23-194K1 on chromosome X, complete sequence Length = 212406 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 catacacacacaaacacatt 35 |||||||||||||||||||| Sbjct: 71032 catacacacacaaacacatt 71013
>emb|BX647170.1|HSM807314 Homo sapiens mRNA; cDNA DKFZp686H12223 (from clone DKFZp686H12223) Length = 4573 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 catacacacacaaacacatt 35 |||||||||||||||||||| Sbjct: 4219 catacacacacaaacacatt 4200
>emb|BX647105.1|HSM807249 Homo sapiens mRNA; cDNA DKFZp686N18124 (from clone DKFZp686N18124) Length = 1973 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 catacacacacaaacacatt 35 |||||||||||||||||||| Sbjct: 1565 catacacacacaaacacatt 1546
>emb|Z11999.1|LE33KOECP L.esculentum mRNA for 33kDa precursor protein of oxygen-evolving complex Length = 1175 Score = 40.1 bits (20), Expect = 3.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 146 accctggatcttgacatccttggg 169 ||||||||| |||||||||||||| Sbjct: 990 accctggattttgacatccttggg 967
>gb|AC123634.10| Mus musculus chromosome 3, clone RP24-434E24, complete sequence Length = 176948 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 catacacacacaaacacatt 35 |||||||||||||||||||| Sbjct: 140098 catacacacacaaacacatt 140079
>emb|CR954168.11| Zebrafish DNA sequence from clone DKEY-264P5 in linkage group 19, complete sequence Length = 128597 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 catacacacacaaacacatt 35 |||||||||||||||||||| Sbjct: 103762 catacacacacaaacacatt 103743
>emb|BX248511.4| Zebrafish DNA sequence from clone CH211-243G18 in linkage group 10, complete sequence Length = 176986 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 catacacacacaaacacatt 35 |||||||||||||||||||| Sbjct: 1740 catacacacacaaacacatt 1759
>emb|AL954363.27| Zebrafish DNA sequence from clone CH211-175L6 in linkage group 3, complete sequence Length = 160599 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 catacacacacaaacacatt 35 |||||||||||||||||||| Sbjct: 108426 catacacacacaaacacatt 108445
>tpe|BN000872.1| TPA: TPA_exp: Mus musculus immunoglobulin heavy chain variable region locus, strain C57BL/6 Length = 2500000 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 gcatacacacacaaacacat 34 |||||||||||||||||||| Sbjct: 1754729 gcatacacacacaaacacat 1754748
>emb|AL772403.11| Mouse DNA sequence from clone RP23-458E2 on chromosome 4, complete sequence Length = 108612 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 gcatacacacacaaacacat 34 |||||||||||||||||||| Sbjct: 10428 gcatacacacacaaacacat 10409
>gb|AC145610.4| Mus musculus BAC clone RP24-281O20 from 18, complete sequence Length = 182640 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 gcatacacacacaaacacat 34 |||||||||||||||||||| Sbjct: 173070 gcatacacacacaaacacat 173089
>gb|AC140293.4| Mus musculus BAC clone RP24-328A10 from 13, complete sequence Length = 188473 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 gcatacacacacaaacacat 34 |||||||||||||||||||| Sbjct: 42523 gcatacacacacaaacacat 42542
>emb|AL604045.7| Mouse DNA sequence from clone RP23-418O11 on chromosome 11, complete sequence Length = 221399 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 catacacacacaaacacatt 35 |||||||||||||||||||| Sbjct: 155310 catacacacacaaacacatt 155291
>emb|AL359087.17| Human DNA sequence from clone RP5-900A3, complete sequence Length = 109860 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 gcatacacacacaaacacat 34 |||||||||||||||||||| Sbjct: 68978 gcatacacacacaaacacat 68959
>emb|AL731778.12| Mouse DNA sequence from clone RP23-475B13 on chromosome 2, complete sequence Length = 211430 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 agcatacacacacaaacaca 33 |||||||||||||||||||| Sbjct: 190183 agcatacacacacaaacaca 190164
>gb|AC122127.31| Mus musculus chromosome 1, clone RP24-401K1, complete sequence Length = 193324 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 gcatacacacacaaacacat 34 |||||||||||||||||||| Sbjct: 139005 gcatacacacacaaacacat 139024
>emb|X00333.1|DVP161C Drosophila virilis simple DNA sequence (pDv-1) Length = 593 Score = 40.1 bits (20), Expect = 3.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 6 tttatactagcatacacacacaaacaca 33 |||||||| ||||||||||||| ||||| Sbjct: 194 tttatacttgcatacacacacacacaca 221 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,604,022 Number of Sequences: 3902068 Number of extensions: 2604022 Number of successful extensions: 261353 Number of sequences better than 10.0: 169 Number of HSP's better than 10.0 without gapping: 169 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 260281 Number of HSP's gapped (non-prelim): 1072 length of query: 247 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 225 effective length of database: 17,147,199,772 effective search space: 3858119948700 effective search space used: 3858119948700 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
