ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd26h19 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY810151.1| Schistosoma japonicum SJCHGC07130 protein mRNA, partial cds Length = 549 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 606 cagctgcggcagctgctgcagctg 629 |||||||||||||||||||||||| Sbjct: 358 cagctgcggcagctgctgcagctg 335
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 606 cagctgcggcagctgctgcagctggag 632 |||| |||||||||||||||||||||| Sbjct: 6682974 cagcggcggcagctgctgcagctggag 6682948
>dbj|AP001800.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443E05 Length = 176935 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 606 cagctgcggcagctgctgcagctggag 632 |||| |||||||||||||||||||||| Sbjct: 35126 cagcggcggcagctgctgcagctggag 35100
>gb|AF235097.2| Homo sapiens chromosome X multiple clones map p11.23, complete sequence Length = 140335 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 605 ccagctgcggcagctgctgcagctgg 630 |||||||||||||||||||| ||||| Sbjct: 77755 ccagctgcggcagctgctgctgctgg 77730
>ref|XM_617555.2| PREDICTED: Bos taurus similar to nuclear receptor co-repressor/HDAC3 complex subunit (LOC537393), partial mRNA Length = 1285 Score = 44.1 bits (22), Expect = 0.57 Identities = 28/30 (93%) Strand = Plus / Plus Query: 600 aagcaccagctgcggcagctgctgcagctg 629 ||||| ||||||| |||||||||||||||| Sbjct: 483 aagcagcagctgctgcagctgctgcagctg 512
>ref|NM_033215.3| Homo sapiens protein phosphatase 1, regulatory (inhibitor) subunit 3F (PPP1R3F), mRNA Length = 2941 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 605 ccagctgcggcagctgctgcagctgg 630 |||||||||||||||||||| ||||| Sbjct: 941 ccagctgcggcagctgctgctgctgg 916
>ref|XM_746375.1| Aspergillus fumigatus Af293 hypothetical protein (Afu4g13630) partial mRNA Length = 3564 Score = 44.1 bits (22), Expect = 0.57 Identities = 28/30 (93%) Strand = Plus / Plus Query: 598 agaagcaccagctgcggcagctgctgcagc 627 ||||||| ||||||| |||||||||||||| Sbjct: 729 agaagcagcagctgcagcagctgctgcagc 758
>dbj|AK056909.1| Homo sapiens cDNA FLJ32347 fis, clone PROST2006988, moderately similar to Mus musculus DXImx48e protein (DXImx48e) mRNA Length = 2680 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 605 ccagctgcggcagctgctgcagctgg 630 |||||||||||||||||||| ||||| Sbjct: 777 ccagctgcggcagctgctgctgctgg 752
>gb|AC102124.16| Mus musculus chromosome 18, clone RP23-188D1, complete sequence Length = 222450 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 595 aggagaagcaccagctgcggcagctgctg 623 |||||||| || ||||||||||||||||| Sbjct: 60615 aggagaaggacaagctgcggcagctgctg 60587
>gb|AC148920.1| Mus musculus BAC clone RP23-273O10 from chromosome 19, complete sequence Length = 224526 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 285 aagaatttgcagaggtcctag 305 ||||||||||||||||||||| Sbjct: 184899 aagaatttgcagaggtcctag 184919
>ref|XM_619554.3| PREDICTED: Mus musculus lipoxygenase homology domains 1 (Loxhd1), mRNA Length = 3814 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 595 aggagaagcaccagctgcggcagctgctg 623 |||||||| || ||||||||||||||||| Sbjct: 2588 aggagaaggacaagctgcggcagctgctg 2616
>ref|XM_973146.1| PREDICTED: Mus musculus lipoxygenase homology domains 1 (Loxhd1), mRNA Length = 7225 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 595 aggagaagcaccagctgcggcagctgctg 623 |||||||| || ||||||||||||||||| Sbjct: 2993 aggagaaggacaagctgcggcagctgctg 3021
>ref|XM_916184.2| PREDICTED: Mus musculus lipoxygenase homology domains 1 (Loxhd1), mRNA Length = 7537 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 595 aggagaagcaccagctgcggcagctgctg 623 |||||||| || ||||||||||||||||| Sbjct: 2993 aggagaaggacaagctgcggcagctgctg 3021
>gb|AC118227.12| Mus musculus chromosome 15, clone RP23-379H6, complete sequence Length = 200663 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 609 ctgcggcagctgctgcagctg 629 ||||||||||||||||||||| Sbjct: 134321 ctgcggcagctgctgcagctg 134301
>emb|CR626875.10| Zebrafish DNA sequence from clone DKEY-31J4 in linkage group 15, complete sequence Length = 212742 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 153 cttcaattgtgtatgaagctcccag 177 |||||||||||||| |||||||||| Sbjct: 176829 cttcaattgtgtataaagctcccag 176853
>emb|BX901973.12| Zebrafish DNA sequence from clone DKEY-26L17 in linkage group 3, complete sequence Length = 226081 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 458 tcacgcagaggaggagcttcc 478 ||||||||||||||||||||| Sbjct: 213562 tcacgcagaggaggagcttcc 213582
>gb|AC153131.5| Mus musculus BAC clone RP24-356O12 from chromosome 19, complete sequence Length = 184864 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 285 aagaatttgcagaggtcctag 305 ||||||||||||||||||||| Sbjct: 78398 aagaatttgcagaggtcctag 78418
>gb|AE012146.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 54 of 460 of the complete genome Length = 12022 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 601 agcaccagctgcggcagctgc 621 ||||||||||||||||||||| Sbjct: 5932 agcaccagctgcggcagctgc 5952
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 601 agcaccagctgcggcagctgc 621 ||||||||||||||||||||| Sbjct: 593788 agcaccagctgcggcagctgc 593808
>dbj|AK030047.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4932417K07 product:HYPOTHETICAL 76.6 KDA PROTEIN homolog [Macaca fascicularis], full insert sequence Length = 3814 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 595 aggagaagcaccagctgcggcagctgctg 623 |||||||| || ||||||||||||||||| Sbjct: 2588 aggagaaggacaagctgcggcagctgctg 2616
>gb|AC155259.1| Mus musculus BAC clone RP24-70C15 from 9, complete sequence Length = 222729 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 548 tgactgctactgtcaccctca 568 ||||||||||||||||||||| Sbjct: 119029 tgactgctactgtcaccctca 119009
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 612 cggcagctgctgcagctggag 632 ||||||||||||||||||||| Sbjct: 1000074 cggcagctgctgcagctggag 1000054
>gb|BC060320.1| Homo sapiens transducin (beta)-like 1X-linked receptor 1, mRNA (cDNA clone IMAGE:4358996), partial cds Length = 566 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 606 cagctgcggcagctgctgcagctg 629 |||||||||||||||| ||||||| Sbjct: 529 cagctgcggcagctgcagcagctg 506
>ref|NM_128172.2| Arabidopsis thaliana FTSH4; ATP-dependent peptidase/ ATPase/ metallopeptidase AT2G26140 (FTSH4) mRNA, complete cds Length = 2713 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 606 cagctgcggcagctgctgcagctg 629 ||||||||||||||||||| |||| Sbjct: 2284 cagctgcggcagctgctgcggctg 2261
>gb|AY423026.1| Danio rerio dystrobrevin, beta (DTNB) mRNA, complete cds Length = 3069 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 caggaagcttcagcgcctcc 260 |||||||||||||||||||| Sbjct: 481 caggaagcttcagcgcctcc 462
>gb|AC168217.2| Mus musculus BAC clone RP24-498P8 from chromosome 9, complete sequence Length = 171426 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 614 gcagctgctgcagctggagc 633 |||||||||||||||||||| Sbjct: 163766 gcagctgctgcagctggagc 163785
>ref|XM_520248.1| PREDICTED: Pan troglodytes similar to nuclear receptor subfamily 5, group A, member 1; fushi tarazu factor (Drosophila) homolog 1; steroidogenic factor-1 (LOC464724), mRNA Length = 1401 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 614 gcagctgctgcagctggagc 633 |||||||||||||||||||| Sbjct: 747 gcagctgctgcagctggagc 766
>ref|XM_526387.1| PREDICTED: Pan troglodytes similar to nuclear receptor co-repressor/HDAC3 complex subunit; TBL1-related protein 1 (LOC471003), mRNA Length = 1635 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 606 cagctgcggcagctgctgcagctg 629 |||||||||||||||| ||||||| Sbjct: 442 cagctgcggcagctgcagcagctg 419
>ref|NM_024665.3| Homo sapiens transducin (beta)-like 1X-linked receptor 1 (TBL1XR1), mRNA Length = 5911 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 606 cagctgcggcagctgctgcagctg 629 |||||||||||||||| ||||||| Sbjct: 602 cagctgcggcagctgcagcagctg 579
>gb|AY571622.1| Eimeria tenella RAPD-SCAR marker Tn-A09-1383 genomic sequence Length = 1383 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 606 cagctgcggcagctgctgcagctg 629 ||||||| |||||||||||||||| Sbjct: 1251 cagctgctgcagctgctgcagctg 1274
>gb|BC078644.1| Mus musculus dachshund 1 (Drosophila), mRNA (cDNA clone IMAGE:6513381), partial cds Length = 4829 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 606 cagctgcggcagctgctgcagctg 629 ||||||| |||||||||||||||| Sbjct: 943 cagctgctgcagctgctgcagctg 966
>gb|AC136710.8| Mus musculus chromosome 19, clone RP23-35B13, complete sequence Length = 206056 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 aagaggagttggatgaagaa 289 |||||||||||||||||||| Sbjct: 122953 aagaggagttggatgaagaa 122934
>ref|XM_601010.2| PREDICTED: Bos taurus similar to bassoon (LOC522724), mRNA Length = 10599 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 614 gcagctgctgcagctggagc 633 |||||||||||||||||||| Sbjct: 5922 gcagctgctgcagctggagc 5941
>ref|XM_425745.1| PREDICTED: Gallus gallus similar to Carbonic anhydrase VI precursor (Carbonate dehydratase VI) (CA-VI) (Secreted carbonic anhydrase) (Salivary carbonic anhydrase) (LOC428187), mRNA Length = 1836 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 614 gcagctgctgcagctggagc 633 |||||||||||||||||||| Sbjct: 360 gcagctgctgcagctggagc 379
>ref|XM_595770.2| PREDICTED: Bos taurus similar to X Kell blood group precursor-related family, member 4 (LOC517598), partial mRNA Length = 1312 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 ggcagggggcgcctcttgac 380 |||||||||||||||||||| Sbjct: 233 ggcagggggcgcctcttgac 214
>ref|NM_007826.2| Mus musculus dachshund 1 (Drosophila) (Dach1), transcript variant 1, mRNA Length = 5225 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 606 cagctgcggcagctgctgcagctg 629 ||||||| |||||||||||||||| Sbjct: 1187 cagctgctgcagctgctgcagctg 1210
>ref|NM_001038610.1| Mus musculus dachshund 1 (Drosophila) (Dach1), transcript variant 2, mRNA Length = 5069 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 606 cagctgcggcagctgctgcagctg 629 ||||||| |||||||||||||||| Sbjct: 1187 cagctgctgcagctgctgcagctg 1210
>ref|NM_144612.4| Homo sapiens lipoxygenase homology domains 1 (LOXHD1), mRNA Length = 4775 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 595 aggagaagcaccagctgcggcagctgct 622 |||||||| || |||||||||||||||| Sbjct: 2066 aggagaaggacaagctgcggcagctgct 2093
>gb|AF040659.1| Caenorhabditis elegans cosmid ZK484, complete sequence Length = 32750 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 606 cagctgcggcagctgctgca 625 |||||||||||||||||||| Sbjct: 3586 cagctgcggcagctgctgca 3605
>ref|XR_002861.1| PREDICTED: Mus musculus similar to 60S ribosomal protein L29 (P23) (LOC670211), mRNA Length = 1119 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 606 cagctgcggcagctgctgcagctg 629 ||||||| |||||||||||||||| Sbjct: 403 cagctgctgcagctgctgcagctg 380
>ref|XM_543571.2| PREDICTED: Canis familiaris similar to RIM binding protein 2 (RIM-BP2) (LOC486445), mRNA Length = 5211 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 606 cagctgcggcagctgctgca 625 |||||||||||||||||||| Sbjct: 295 cagctgcggcagctgctgca 314
>gb|AC140320.2| Mus musculus BAC clone RP23-401C13 from chromosome 19, complete sequence Length = 197365 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 aagaggagttggatgaagaa 289 |||||||||||||||||||| Sbjct: 133544 aagaggagttggatgaagaa 133563
>ref|XM_755880.1| Ustilago maydis 521 hypothetical protein (UM04826.1) partial mRNA Length = 2331 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 611 gcggcagctgctgcagctggagca 634 ||||||||||||||||||| |||| Sbjct: 377 gcggcagctgctgcagctgcagca 354
>ref|XM_846937.1| PREDICTED: Canis familiaris similar to nuclear receptor subfamily 5, group A, member 1 (LOC609642), mRNA Length = 1398 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 614 gcagctgctgcagctggagc 633 |||||||||||||||||||| Sbjct: 696 gcagctgctgcagctggagc 715
>gb|AC126264.3| Mus musculus BAC clone RP23-376F13 from chromosome 14, complete sequence Length = 169909 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 606 cagctgcggcagctgctgcagctg 629 ||||||| |||||||||||||||| Sbjct: 33683 cagctgctgcagctgctgcagctg 33706
>emb|CR695516.2|CNS0FZM0 Tetraodon nigroviridis full-length cDNA Length = 532 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 606 cagctgcggcagctgctgcagctg 629 |||||||| ||||||||||||||| Sbjct: 266 cagctgcgccagctgctgcagctg 243
>gb|AY358455.1| Homo sapiens clone DNA35680 SQFE253 (UNQ253) mRNA, complete cds Length = 3531 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 606 cagctgcggcagctgctgcagctg 629 ||||||| |||||||||||||||| Sbjct: 101 cagctgctgcagctgctgcagctg 78
>gb|AC137824.25| Medicago truncatula clone mth2-10l10, complete sequence Length = 114536 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 264 cagtggaagaggagttggatgaagaatt 291 ||||||||||||| |||||||| ||||| Sbjct: 37742 cagtggaagaggatttggatgatgaatt 37715
>gb|BC059934.1| Mus musculus cDNA clone IMAGE:6826750 Length = 5088 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 606 cagctgcggcagctgctgcagctg 629 ||||||| |||||||||||||||| Sbjct: 1187 cagctgctgcagctgctgcagctg 1210
>emb|AL731897.12| Human DNA sequence from clone RP11-284G10 on chromosome 9 Contains a novel gene, complete sequence Length = 125196 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 ccagcaggcaggaagagcac 226 |||||||||||||||||||| Sbjct: 73809 ccagcaggcaggaagagcac 73790
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 439 ttggcggaggggacgagcat 458 |||||||||||||||||||| Sbjct: 1966214 ttggcggaggggacgagcat 1966195
>emb|AL359983.7| Human DNA sequence from clone RP11-139L21 on chromosome 1 Contains part of a novel gene (FLJ10157), complete sequence Length = 166254 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 479 tggcggggagcagggcgagg 498 |||||||||||||||||||| Sbjct: 63338 tggcggggagcagggcgagg 63319
>emb|AL354979.17| Human DNA sequence from clone RP11-10J18 on chromosome 9, complete sequence Length = 85997 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 614 gcagctgctgcagctggagc 633 |||||||||||||||||||| Sbjct: 13617 gcagctgctgcagctggagc 13598
>emb|AL353788.33| Human DNA sequence from clone RP11-112K13 on chromosome Xq26.1-26.3, complete sequence Length = 162739 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 282 atgaagaatttgcagaggtcctag 305 |||| ||||||||||||||||||| Sbjct: 109668 atgatgaatttgcagaggtcctag 109645
>ref|NM_019146.1| Rattus norvegicus bassoon (Bsn), mRNA Length = 12507 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 614 gcagctgctgcagctggagc 633 |||||||||||||||||||| Sbjct: 7193 gcagctgctgcagctggagc 7212
>ref|NM_007567.1| Mus musculus bassoon (Bsn), mRNA Length = 11936 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 614 gcagctgctgcagctggagc 633 |||||||||||||||||||| Sbjct: 7134 gcagctgctgcagctggagc 7153
>gb|AC023235.24| Homo sapiens 3 BAC RP11-484D18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 169633 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 606 cagctgcggcagctgctgcagctg 629 |||||||||||||||| ||||||| Sbjct: 103483 cagctgcggcagctgcagcagctg 103506
>emb|AL121870.9|HSB166C10 Human DNA sequence from clone RP13-166C10 on chromosome Xq21.1-21.3, complete sequence Length = 122049 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 353 ggctggcgggcagggggcgcctct 376 ||||||| |||||||||||||||| Sbjct: 25883 ggctggcaggcagggggcgcctct 25860
>gb|AY673989.1| Canis familiaris steroidogenic factor 1 (Sf1) gene, exon 4 and partial cds Length = 615 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 614 gcagctgctgcagctggagc 633 |||||||||||||||||||| Sbjct: 369 gcagctgctgcagctggagc 388
>gb|AF360344.1| Arabidopsis thaliana At2g26140 mRNA sequence Length = 2678 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 606 cagctgcggcagctgctgcagctg 629 ||||||||||||||||||| |||| Sbjct: 2231 cagctgcggcagctgctgcggctg 2208
>emb|BX294015.1|NCB10N12 Neurospora crassa DNA linkage group V BAC contig B10N12 Length = 70199 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 430 aggggcatcttggcggaggggacg 453 ||||||||||||||||| |||||| Sbjct: 15462 aggggcatcttggcggacgggacg 15439
>emb|AL022600.1|SPBC13G1 S.pombe chromosome II cosmid c13G1 Length = 28000 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 aagaggagttggatgaagaa 289 |||||||||||||||||||| Sbjct: 14715 aagaggagttggatgaagaa 14734
>gb|AC018931.9| Homo sapiens chromosome 18, clone RP11-418K9, complete sequence Length = 185117 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 595 aggagaagcaccagctgcggcagctgct 622 |||||||| || |||||||||||||||| Sbjct: 180778 aggagaaggacaagctgcggcagctgct 180751
>emb|AJ005669.1|MMU5669 Mus musculus mRNA for dachshund protein Length = 2467 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 606 cagctgcggcagctgctgcagctg 629 ||||||| |||||||||||||||| Sbjct: 471 cagctgctgcagctgctgcagctg 494
>gb|AF314544.1| Homo sapiens nuclear receptor co-repressor/HDAC3 complex subunit TBLR1 (TBLR1) mRNA, complete cds Length = 1745 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 606 cagctgcggcagctgctgcagctg 629 |||||||||||||||| ||||||| Sbjct: 475 cagctgcggcagctgcagcagctg 452
>gb|AC036196.10| Homo sapiens chromosome 15, clone RP11-599A21, complete sequence Length = 180366 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 gaagaggagttggatgaaga 288 |||||||||||||||||||| Sbjct: 65348 gaagaggagttggatgaaga 65329
>ref|NM_004959.3| Homo sapiens nuclear receptor subfamily 5, group A, member 1 (NR5A1), mRNA Length = 3119 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 614 gcagctgctgcagctggagc 633 |||||||||||||||||||| Sbjct: 871 gcagctgctgcagctggagc 890
>gb|AC010666.4| Drosophila melanogaster 3L BAC RP98-22O21 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 175519 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 613 ggcagctgctgcagctggag 632 |||||||||||||||||||| Sbjct: 152614 ggcagctgctgcagctggag 152595
>gb|DQ397827.1| Cenarchaeum symbiosum clone C01A01, complete sequence Length = 37585 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 608 gctgcggcagctgctgcagc 627 |||||||||||||||||||| Sbjct: 29949 gctgcggcagctgctgcagc 29968
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 ggcgggcagggggcgcctct 376 |||||||||||||||||||| Sbjct: 2419948 ggcgggcagggggcgcctct 2419967
>dbj|AK127869.1| Homo sapiens cDNA FLJ45972 fis, clone PLACE7018304 Length = 4775 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 595 aggagaagcaccagctgcggcagctgct 622 |||||||| || |||||||||||||||| Sbjct: 2066 aggagaaggacaagctgcggcagctgct 2093
>dbj|AK125187.1| Homo sapiens cDNA FLJ43197 fis, clone FEBRA2006396 Length = 2870 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 479 tggcggggagcagggcgagg 498 |||||||||||||||||||| Sbjct: 1107 tggcggggagcagggcgagg 1088
>dbj|AK022956.1| Homo sapiens cDNA FLJ12894 fis, clone NT2RP2004170, moderately similar to Homo sapiens mRNA for transducin (beta) like 1 protein Length = 2821 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 606 cagctgcggcagctgctgcagctg 629 |||||||||||||||| ||||||| Sbjct: 575 cagctgcggcagctgcagcagctg 552
>gb|AC068870.17| Homo sapiens chromosome , clone RP11-775C24, complete sequence Length = 194237 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 gaagaggagttggatgaaga 288 |||||||||||||||||||| Sbjct: 174310 gaagaggagttggatgaaga 174291
>gb|AC004747.3| Arabidopsis thaliana chromosome 2 clone T19L18 map B68, complete sequence Length = 87080 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 606 cagctgcggcagctgctgcagctg 629 ||||||||||||||||||| |||| Sbjct: 12488 cagctgcggcagctgctgcggctg 12465
>dbj|AK139060.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:A730010G10 product:dachshund 1 (Drosophila), full insert sequence Length = 4396 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 606 cagctgcggcagctgctgcagctg 629 ||||||| |||||||||||||||| Sbjct: 1410 cagctgctgcagctgctgcagctg 1433
>gb|AC094020.2| Homo sapiens chromosome 3 clone RP11-425J9, complete sequence Length = 194729 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 606 cagctgcggcagctgctgcagctg 629 ||||||| |||||||||||||||| Sbjct: 160740 cagctgctgcagctgctgcagctg 160717
>ref|XM_936752.1| PREDICTED: Homo sapiens hypothetical protein MGC35030 (MGC35030), mRNA Length = 1177 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 479 tggcggggagcagggcgagg 498 |||||||||||||||||||| Sbjct: 434 tggcggggagcagggcgagg 415
>ref|XM_290936.3| PREDICTED: Homo sapiens hypothetical protein MGC35030 (MGC35030), mRNA Length = 1177 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 479 tggcggggagcagggcgagg 498 |||||||||||||||||||| Sbjct: 434 tggcggggagcagggcgagg 415
>gb|AC040165.6| Homo sapiens chromosome 16 clone RP11-420O6, complete sequence Length = 209756 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 479 tggcggggagcagggcgagg 498 |||||||||||||||||||| Sbjct: 135531 tggcggggagcagggcgagg 135512
>ref|XM_941211.1| PREDICTED: Homo sapiens neurobeachin-like 2 (NBEAL2), mRNA Length = 8845 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 606 cagctgcggcagctgctgcagctg 629 ||||||| |||||||||||||||| Sbjct: 5173 cagctgctgcagctgctgcagctg 5150
>ref|XM_291064.5| PREDICTED: Homo sapiens neurobeachin-like 2 (NBEAL2), mRNA Length = 8788 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 606 cagctgcggcagctgctgcagctg 629 ||||||| |||||||||||||||| Sbjct: 5116 cagctgctgcagctgctgcagctg 5093
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 132 ttccagataccagtggcagacctt 155 |||||||||||||| ||||||||| Sbjct: 3528746 ttccagataccagtcgcagacctt 3528769
>emb|AJ633620.1| Pseudomonas aeruginosa alkB2 gene for alkane hydroxylase, strain CHA Length = 1383 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 484 gggagcagggcgaggacgatcatc 507 |||| ||||||||||||||||||| Sbjct: 1206 gggaacagggcgaggacgatcatc 1183
>emb|AJ633619.1| Pseudomonas aeruginosa alkB2 gene for alkane hydroxylase, strain ATCC15524 Length = 1360 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 484 gggagcagggcgaggacgatcatc 507 |||| ||||||||||||||||||| Sbjct: 1195 gggaacagggcgaggacgatcatc 1172
>emb|AJ633618.1| Pseudomonas aeruginosa alkB2 gene for alkane hydroxylase, strain CECT119 Length = 1405 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 484 gggagcagggcgaggacgatcatc 507 |||| ||||||||||||||||||| Sbjct: 1228 gggaacagggcgaggacgatcatc 1205
>emb|AJ633617.1| Pseudomonas aeruginosa alkB2 gene for alkane hydroxylase, strain 19G12 Length = 1372 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 484 gggagcagggcgaggacgatcatc 507 |||| ||||||||||||||||||| Sbjct: 1207 gggaacagggcgaggacgatcatc 1184
>emb|AJ633616.1| Pseudomonas aeruginosa alkB2 gene for alkane hydroxylase, strain PAK Length = 1404 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 484 gggagcagggcgaggacgatcatc 507 |||| ||||||||||||||||||| Sbjct: 1228 gggaacagggcgaggacgatcatc 1205
>emb|AJ633615.1| Pseudomonas aeruginosa alkB2 gene for alkane hydroxylase, strain ATCC33818 Length = 1308 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 484 gggagcagggcgaggacgatcatc 507 |||| ||||||||||||||||||| Sbjct: 1131 gggaacagggcgaggacgatcatc 1108
>emb|AJ633614.1| Pseudomonas aeruginosa alkB2 gene for alkane hydroxylase, strain ATCC33356 Length = 1361 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 484 gggagcagggcgaggacgatcatc 507 |||| ||||||||||||||||||| Sbjct: 1195 gggaacagggcgaggacgatcatc 1172
>emb|AJ633613.1| Pseudomonas aeruginosa alkB2 gene for alkane hydroxylase, strain ATCC15691 Length = 1421 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 484 gggagcagggcgaggacgatcatc 507 |||| ||||||||||||||||||| Sbjct: 1207 gggaacagggcgaggacgatcatc 1184
>emb|AJ633612.1| Pseudomonas aeruginosa alkB2 gene for alkane hydroxylase, strain ATCC10145 Length = 1390 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 484 gggagcagggcgaggacgatcatc 507 |||| ||||||||||||||||||| Sbjct: 1228 gggaacagggcgaggacgatcatc 1205
>emb|AJ633611.1| Pseudomonas aeruginosa alkB2 gene for alkane hydroxylase, strain SG31 Length = 1372 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 484 gggagcagggcgaggacgatcatc 507 |||| ||||||||||||||||||| Sbjct: 1206 gggaacagggcgaggacgatcatc 1183
>emb|AJ633610.1| Pseudomonas aeruginosa alkB2 gene for alkane hydroxylase, strain 63741 Length = 1427 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 484 gggagcagggcgaggacgatcatc 507 |||| ||||||||||||||||||| Sbjct: 1234 gggaacagggcgaggacgatcatc 1211
>emb|AJ633609.1| Pseudomonas aeruginosa alkB2 gene for alkane hydroxylase, strain HJ2 Length = 1383 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 484 gggagcagggcgaggacgatcatc 507 |||| ||||||||||||||||||| Sbjct: 1206 gggaacagggcgaggacgatcatc 1183
>emb|AJ633608.1| Pseudomonas aeruginosa alkB2 gene for alkane hydroxylase, strain DM Length = 1353 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 484 gggagcagggcgaggacgatcatc 507 |||| ||||||||||||||||||| Sbjct: 1206 gggaacagggcgaggacgatcatc 1183
>emb|AJ633607.1| Pseudomonas aeruginosa alkB2 gene for alkane hydroxylase, strain DSM1128 Length = 1435 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 484 gggagcagggcgaggacgatcatc 507 |||| ||||||||||||||||||| Sbjct: 1246 gggaacagggcgaggacgatcatc 1223
>emb|AJ633606.1| Pseudomonas aeruginosa alkB2 gene for alkane hydroxylase, strain G7 Length = 1409 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 484 gggagcagggcgaggacgatcatc 507 |||| ||||||||||||||||||| Sbjct: 1195 gggaacagggcgaggacgatcatc 1172
>emb|AJ633605.1| Pseudomonas aeruginosa alkB2 gene for alkane hydroxylase, strain 892 Length = 1431 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 484 gggagcagggcgaggacgatcatc 507 |||| ||||||||||||||||||| Sbjct: 1223 gggaacagggcgaggacgatcatc 1200
>emb|AJ633604.1| Pseudomonas aeruginosa alkB2 gene for alkane hydroxylase, strain SG1 Length = 1430 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 484 gggagcagggcgaggacgatcatc 507 |||| ||||||||||||||||||| Sbjct: 1222 gggaacagggcgaggacgatcatc 1199
>emb|AJ633603.1| Pseudomonas aeruginosa alkB2 gene for alkane hydroxylase, strain K9 Length = 1383 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 484 gggagcagggcgaggacgatcatc 507 |||| ||||||||||||||||||| Sbjct: 1207 gggaacagggcgaggacgatcatc 1184
>emb|AJ633602.1| Pseudomonas aeruginosa alkB2 gene for alkane hydroxylase, strain RR1 Length = 1134 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 484 gggagcagggcgaggacgatcatc 507 |||| ||||||||||||||||||| Sbjct: 1046 gggaacagggcgaggacgatcatc 1023
>dbj|AK220842.1| Arabidopsis thaliana mRNA for FtsH like protease, partial cds, clone: RAFL22-38-C03 Length = 403 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 606 cagctgcggcagctgctgcagctg 629 ||||||||||||||||||| |||| Sbjct: 92 cagctgcggcagctgctgcggctg 69
>ref|NM_199709.1| Danio rerio dystrobrevin, beta (dtnb), mRNA Length = 3069 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 caggaagcttcagcgcctcc 260 |||||||||||||||||||| Sbjct: 481 caggaagcttcagcgcctcc 462
>gb|AC132370.9| Mus musculus BAC clone RP23-471F3 from chromosome 14, complete sequence Length = 169022 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 606 cagctgcggcagctgctgcagctg 629 ||||||| |||||||||||||||| Sbjct: 4956 cagctgctgcagctgctgcagctg 4933
>ref|NM_001022480.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPBC13G1.09), partial mRNA Length = 1350 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 aagaggagttggatgaagaa 289 |||||||||||||||||||| Sbjct: 188 aagaggagttggatgaagaa 207
>ref|NM_059350.2| Caenorhabditis elegans ZK484.3 (ZK484.3) mRNA, complete cds Length = 1291 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 606 cagctgcggcagctgctgca 625 |||||||||||||||||||| Sbjct: 369 cagctgcggcagctgctgca 350
>gb|AY923834.1| Homo sapiens kinesin family member 26B (KIF26B) mRNA, complete cds Length = 7288 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 479 tggcggggagcagggcgagg 498 |||||||||||||||||||| Sbjct: 1107 tggcggggagcagggcgagg 1088
>dbj|AK053594.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130112M23 product:dachshund 1 (Drosophila), full insert sequence Length = 4489 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 606 cagctgcggcagctgctgcagctg 629 ||||||| |||||||||||||||| Sbjct: 618 cagctgctgcagctgctgcagctg 641
>dbj|AK047409.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930059B11 product:dachshund 1 (Drosophila), full insert sequence Length = 2799 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 606 cagctgcggcagctgctgcagctg 629 ||||||| |||||||||||||||| Sbjct: 275 cagctgctgcagctgctgcagctg 298
>emb|BX820113.1|CNS0AA0Z Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS75ZB07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2692 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 606 cagctgcggcagctgctgcagctg 629 ||||||||||||||||||| |||| Sbjct: 2289 cagctgcggcagctgctgcggctg 2266
>gb|AC127430.4| Homo sapiens chromosome 3 clone CTD-2563A18, complete sequence Length = 181750 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 606 cagctgcggcagctgctgcagctg 629 ||||||| |||||||||||||||| Sbjct: 17272 cagctgctgcagctgctgcagctg 17249
>dbj|D88155.2| Homo sapiens Ad4BP gene for steroidgenic factor 1 (SF-1), complete cds Length = 5256 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 614 gcagctgctgcagctggagc 633 |||||||||||||||||||| Sbjct: 2225 gcagctgctgcagctggagc 2244
>gb|AF268193.1|AF268193 Homo sapiens IRA1 mRNA, complete cds, alternatively spliced Length = 3885 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 606 cagctgcggcagctgctgcagctg 629 |||||||||||||||| ||||||| Sbjct: 509 cagctgcggcagctgcagcagctg 486
>gb|AC084480.1|CBRG02E15 Caenorhabditis briggsae cosmid G02E15, complete sequence Length = 42065 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 tctcaaaacatcaaacataa 62 |||||||||||||||||||| Sbjct: 35303 tctcaaaacatcaaacataa 35284
>ref|NM_214179.1| Sus scrofa steroidogenic factor-1 SF-1 (SF-1), mRNA Length = 2934 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 614 gcagctgctgcagctggagc 633 |||||||||||||||||||| Sbjct: 1551 gcagctgctgcagctggagc 1570
>gb|AE004581.1| Pseudomonas aeruginosa PAO1, section 142 of 529 of the complete genome Length = 13203 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 484 gggagcagggcgaggacgatcatc 507 |||| ||||||||||||||||||| Sbjct: 229 gggaacagggcgaggacgatcatc 252
>ref|XM_579421.1| PREDICTED: Rattus norvegicus hypothetical gene supported by NM_019146 (LOC497833), mRNA Length = 12491 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 614 gcagctgctgcagctggagc 633 |||||||||||||||||||| Sbjct: 7190 gcagctgctgcagctggagc 7209
>emb|BX648935.1|HSM809086 Homo sapiens mRNA; cDNA DKFZp686A0748 (from clone DKFZp686A0748) Length = 6568 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 606 cagctgcggcagctgctgcagctg 629 |||||||||||||||| ||||||| Sbjct: 610 cagctgcggcagctgcagcagctg 587
>dbj|AK131104.1| Homo sapiens mRNA for FLJ00341 protein Length = 8511 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 606 cagctgcggcagctgctgcagctg 629 ||||||| |||||||||||||||| Sbjct: 4991 cagctgctgcagctgctgcagctg 4968
>gb|AF129510.1|AF129510 Mus musculus DACH protein (Dach) mRNA, complete cds Length = 2704 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 606 cagctgcggcagctgctgcagctg 629 ||||||| |||||||||||||||| Sbjct: 1171 cagctgctgcagctgctgcagctg 1194
>gb|AF102547.1|AF102547 Mus musculus dachshund (Dach) mRNA, complete cds Length = 2256 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 606 cagctgcggcagctgctgcagctg 629 ||||||| |||||||||||||||| Sbjct: 953 cagctgctgcagctgctgcagctg 976
>gb|BC032501.1| Homo sapiens nuclear receptor subfamily 5, group A, member 1, mRNA (cDNA clone MGC:45252 IMAGE:5227690), complete cds Length = 3119 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 614 gcagctgctgcagctggagc 633 |||||||||||||||||||| Sbjct: 871 gcagctgctgcagctggagc 890
>gb|AC137678.11| Mus musculus chromosome 9, clone RP24-484G16, complete sequence Length = 172337 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 614 gcagctgctgcagctggagc 633 |||||||||||||||||||| Sbjct: 123945 gcagctgctgcagctggagc 123926
>emb|Y16563.1|RNY16563 Rattus norvegicus mRNA for brain-specific synapse-associated protein, Bassoon Length = 12507 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 614 gcagctgctgcagctggagc 633 |||||||||||||||||||| Sbjct: 7193 gcagctgctgcagctggagc 7212
>gb|AF090437.1|AF090437 Mus musculus dachshund variant 2 (Dach) mRNA, complete cds Length = 2100 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 606 cagctgcggcagctgctgcagctg 629 ||||||| |||||||||||||||| Sbjct: 953 cagctgctgcagctgctgcagctg 976
>gb|AF090436.1|AF090436 Mus musculus dachshund variant 1 (Dach) mRNA, complete cds Length = 2256 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 606 cagctgcggcagctgctgcagctg 629 ||||||| |||||||||||||||| Sbjct: 953 cagctgctgcagctgctgcagctg 976
>gb|AE003599.2| Drosophila melanogaster chromosome 3L, section 80 of 83 of the complete sequence Length = 250029 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 613 ggcagctgctgcagctggag 632 |||||||||||||||||||| Sbjct: 28940 ggcagctgctgcagctggag 28921
>emb|Y17037.1|MMY17037 Mus musculus bassoon gene, exon 4 and 5 Length = 8748 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 614 gcagctgctgcagctggagc 633 |||||||||||||||||||| Sbjct: 6428 gcagctgctgcagctggagc 6447
>dbj|AP006210.1| Homo sapiens genomic DNA, chromosome 9, clone:RP11-449F3, complete sequence Length = 165755 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 ccagcaggcaggaagagcac 226 |||||||||||||||||||| Sbjct: 149607 ccagcaggcaggaagagcac 149588
>gb|U84399.1|SSU84399 Sus scrofa steroidogenic factor-1 SF-1 (SF-1) mRNA, complete cds Length = 2934 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 614 gcagctgctgcagctggagc 633 |||||||||||||||||||| Sbjct: 1551 gcagctgctgcagctggagc 1570
>gb|AF069324.1|AF069324 Mesembryanthemum crystallinum 26S proteasome regulatory subunit S5A mRNA, complete cds Length = 1805 Score = 40.1 bits (20), Expect = 8.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 603 caccagctgcggcagctgctgcagctggagca 634 ||||||||||||| || |||||||||| |||| Sbjct: 799 caccagctgcggctgcagctgcagctgcagca 768
>gb|BC042481.1| Homo sapiens hypothetical protein MGC35030, mRNA (cDNA clone MGC:35030 IMAGE:5164982), complete cds Length = 1255 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 479 tggcggggagcagggcgagg 498 |||||||||||||||||||| Sbjct: 440 tggcggggagcagggcgagg 421
>gb|U76388.1|HSU76388 Human steroidogenic factor 1 mRNA, complete cds Length = 1895 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 614 gcagctgctgcagctggagc 633 |||||||||||||||||||| Sbjct: 699 gcagctgctgcagctggagc 718
>emb|AL732474.8| Mouse DNA sequence from clone RP23-180I2 on chromosome 4, complete sequence Length = 151555 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 606 cagctgcggcagctgctgcagctg 629 ||||||| |||||||||||||||| Sbjct: 45227 cagctgctgcagctgctgcagctg 45204
>dbj|AB020873.1| Homo sapiens genomic DNA of 9q32 anti-oncogene of flat epitherium cancer , segment 5/10 Length = 100000 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 ccagcaggcaggaagagcac 226 |||||||||||||||||||| Sbjct: 97388 ccagcaggcaggaagagcac 97369
>dbj|AB011112.3| Homo sapiens mRNA for KIAA0540 protein, partial cds Length = 6364 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 606 cagctgcggcagctgctgcagctg 629 ||||||| |||||||||||||||| Sbjct: 2835 cagctgctgcagctgctgcagctg 2812 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,393,897 Number of Sequences: 3902068 Number of extensions: 5393897 Number of successful extensions: 116186 Number of sequences better than 10.0: 137 Number of HSP's better than 10.0 without gapping: 137 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 115574 Number of HSP's gapped (non-prelim): 611 length of query: 650 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 627 effective length of database: 17,143,297,704 effective search space: 10748847660408 effective search space used: 10748847660408 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
