>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 70/80 (87%), Gaps = 1/80 (1%)
 Strand = Plus / Minus

                                                                           
Query: 370     tatacctgtacagatgcaactaatcatgttgaagcaacctccgctgctctctgtctcatc 429
               |||| |||||||||||| |||| || | ||| |||||| || ||||||||||||||||||
Sbjct: 1996651 tatagctgtacagatgccactactcgt-ttgcagcaacttctgctgctctctgtctcatc 1996593

                                   
Query: 430     atctcattaacagcagccct 449
               || ||||| |||||||||||
Sbjct: 1996592 atttcatttacagcagccct 1996573



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 53/60 (88%), Gaps = 3/60 (5%)
 Strand = Plus / Minus

                                                                           
Query: 30      aaaacaagattagtccaactagtacagg---tcaaacgaaagaatcaccacacccaaggg 86
               |||||||||||||| | |||||||||||   |||||  ||||||||||||||||||||||
Sbjct: 1997057 aaaacaagattagttccactagtacaggaggtcaaataaaagaatcaccacacccaaggg 1996998

>dbj|AP005647.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0026E05
          Length = 159860

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 70/80 (87%), Gaps = 1/80 (1%)
 Strand = Plus / Minus

                                                                         
Query: 370   tatacctgtacagatgcaactaatcatgttgaagcaacctccgctgctctctgtctcatc 429
             |||| |||||||||||| |||| || | ||| |||||| || ||||||||||||||||||
Sbjct: 46859 tatagctgtacagatgccactactcgt-ttgcagcaacttctgctgctctctgtctcatc 46801

                                 
Query: 430   atctcattaacagcagccct 449
             || ||||| |||||||||||
Sbjct: 46800 atttcatttacagcagccct 46781



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 53/60 (88%), Gaps = 3/60 (5%)
 Strand = Plus / Minus

                                                                         
Query: 30    aaaacaagattagtccaactagtacagg---tcaaacgaaagaatcaccacacccaaggg 86
             |||||||||||||| | |||||||||||   |||||  ||||||||||||||||||||||
Sbjct: 47265 aaaacaagattagttccactagtacaggaggtcaaataaaagaatcaccacacccaaggg 47206

>dbj|AP005474.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0081C13
          Length = 144624

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 70/80 (87%), Gaps = 1/80 (1%)
 Strand = Plus / Minus

                                                                          
Query: 370    tatacctgtacagatgcaactaatcatgttgaagcaacctccgctgctctctgtctcatc 429
              |||| |||||||||||| |||| || | ||| |||||| || ||||||||||||||||||
Sbjct: 136212 tatagctgtacagatgccactactcgt-ttgcagcaacttctgctgctctctgtctcatc 136154

                                  
Query: 430    atctcattaacagcagccct 449
              || ||||| |||||||||||
Sbjct: 136153 atttcatttacagcagccct 136134



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 53/60 (88%), Gaps = 3/60 (5%)
 Strand = Plus / Minus

                                                                          
Query: 30     aaaacaagattagtccaactagtacagg---tcaaacgaaagaatcaccacacccaaggg 86
              |||||||||||||| | |||||||||||   |||||  ||||||||||||||||||||||
Sbjct: 136618 aaaacaagattagttccactagtacaggaggtcaaataaaagaatcaccacacccaaggg 136559

>ref|XM_464063.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 4872

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                            
Query: 402  agcaacctccgctgctctctgtctcatcatctcattaacagcagccct 449
            |||||| || |||||||||||||||||||| ||||| |||||||||||
Sbjct: 4860 agcaacttctgctgctctctgtctcatcatttcatttacagcagccct 4813

>emb|BX000520.12| Mouse DNA sequence from clone RP23-261N8 on chromosome X, complete
             sequence
          Length = 112153

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 171   ttcacccttccttaggagaatgg 193
             |||||||||||||||||||||||
Sbjct: 26491 ttcacccttccttaggagaatgg 26469

>emb|BX908733.14| Zebrafish DNA sequence from clone CH211-190N7 in linkage group 22,
            complete sequence
          Length = 153031

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 411  cgctgctctctgtctcatcatctca 435
            |||||||||||||||||||| ||||
Sbjct: 2293 cgctgctctctgtctcatcacctca 2269

>gb|AC022033.10| Homo sapiens chromosome 8, clone RP11-214C21, complete sequence
          Length = 175298

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 321    tgagaggactgagaccctgca 341
              |||||||||||||||||||||
Sbjct: 118944 tgagaggactgagaccctgca 118924

>gb|AC017014.4| Homo sapiens BAC clone RP11-142D10 from 2, complete sequence
          Length = 182366

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 313    gtgggggatgagaggactgag 333
              |||||||||||||||||||||
Sbjct: 124117 gtgggggatgagaggactgag 124097

>dbj|AP001206.3| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1396H2
          Length = 162392

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 321   tgagaggactgagaccctgca 341
             |||||||||||||||||||||
Sbjct: 51444 tgagaggactgagaccctgca 51464

>ref|NM_101532.1| Arabidopsis thaliana transcription cofactor/ zinc ion binding
            AT1G16710 mRNA, complete cds
          Length = 5705

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 415  gctctctgtctcatcatctc 434
            ||||||||||||||||||||
Sbjct: 5093 gctctctgtctcatcatctc 5074

>gb|AC122262.3| Mus musculus BAC clone RP23-190N21 from chromosome 9, complete sequence
          Length = 193762

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 246    cttccatcttctaggacaat 265
              ||||||||||||||||||||
Sbjct: 155347 cttccatcttctaggacaat 155328

>gb|AC163746.5| Mus musculus BAC clone RP23-394B5 from chromosome 17, complete sequence
          Length = 199852

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 415    gctctctgtctcatcatctcatta 438
              ||||||| ||||||||||||||||
Sbjct: 169967 gctctctttctcatcatctcatta 169944

>gb|AC140222.3| Mus musculus BAC clone RP24-330A7 from chromosome 9, complete sequence
          Length = 145102

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 246    cttccatcttctaggacaat 265
              ||||||||||||||||||||
Sbjct: 133410 cttccatcttctaggacaat 133429

>gb|AC136921.8| Mus musculus chromosome 17, clone RP23-210D4, complete sequence
          Length = 244237

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 415    gctctctgtctcatcatctcatta 438
              ||||||| ||||||||||||||||
Sbjct: 147195 gctctctttctcatcatctcatta 147218

>gb|AC129095.12| Mus musculus strain C57BL/6J clone rp23-360g16 map 17, complete sequence
          Length = 209946

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 415    gctctctgtctcatcatctcatta 438
              ||||||| ||||||||||||||||
Sbjct: 208074 gctctctttctcatcatctcatta 208097

>emb|AL161793.9| Human DNA sequence from clone RP11-23I7 on chromosome 1q32.1-32.3
             Contains the 5' end of the LRRN5 gene for leucine rich
             repeat neuronal 5 and a novel gene, complete sequence
          Length = 162345

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 111   atcagcagcacagtcagcag 130
             ||||||||||||||||||||
Sbjct: 99340 atcagcagcacagtcagcag 99359

>gb|AC096675.2| Homo sapiens chromosome 1 clone RP11-80N9, complete sequence
          Length = 170467

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 111  atcagcagcacagtcagcag 130
            ||||||||||||||||||||
Sbjct: 1734 atcagcagcacagtcagcag 1753

>ref|XM_687704.1| PREDICTED: Danio rerio similar to transient receptor potential
           cation channel, subfamily C, member 6 (LOC564364), mRNA
          Length = 1506

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 173 cacccttccttaggagaatg 192
           ||||||||||||||||||||
Sbjct: 232 cacccttccttaggagaatg 213

>emb|BX817563.1|CNS0ABB7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL30ZC10 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1405

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 415 gctctctgtctcatcatctc 434
           ||||||||||||||||||||
Sbjct: 839 gctctctgtctcatcatctc 820

>gb|AC011808.4|AC011808 Arabidopsis thaliana chromosome I BAC F19K19 genomic sequence, complete
             sequence
          Length = 93485

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 415   gctctctgtctcatcatctc 434
             ||||||||||||||||||||
Sbjct: 16905 gctctctgtctcatcatctc 16924

>gb|AC026237.4|AC026237 Arabidopsis thaliana chromosome I BAC F17F16 genomic sequence, complete
             sequence
          Length = 90498

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 415   gctctctgtctcatcatctc 434
             ||||||||||||||||||||
Sbjct: 79182 gctctctgtctcatcatctc 79201


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,467,103
Number of Sequences: 3902068
Number of extensions: 3467103
Number of successful extensions: 53445
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53383
Number of HSP's gapped (non-prelim): 56
length of query: 454
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 432
effective length of database: 17,147,199,772
effective search space: 7407590301504
effective search space used: 7407590301504
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)