>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific|
           protein homolog) (Latex allergen Hev b 13)
          Length = 391

 Score = 98.6 bits (244), Expect = 1e-20
 Identities = 58/144 (40%), Positives = 73/144 (50%), Gaps = 11/144 (7%)
 Frame = -3

Query: 513 SDYDSVGCLKTYNEFAQRHNAMVQQKLQVLRLKYPKARIMYADYYGAAMSFAKNPKQFGF 334
           ++ DS GC K YNE AQ  N  +++ +  LR   P A  ++ D Y    S    P++ GF
Sbjct: 239 AEKDSAGCAKAYNEVAQHFNHKLKEIVAQLRKDLPLATFVHVDIYSVKYSLFSEPEKHGF 298

Query: 333 KQGPLKTCCGGGGPYNFNPTASCG-----------VRGSSVCADPSAYANWDGVHLTEAA 187
            + PL TCCG GG YNF+ TA CG           V GS  CA PS   NWDG H TEAA
Sbjct: 299 -EFPLITCCGYGGKYNFSVTAPCGDTVTADDGTKIVVGS--CACPSVRVNWDGAHYTEAA 355

Query: 186 YHAIADSILHGPYTSPRLL*PPAC 115
                D I  G ++ P +    AC
Sbjct: 356 NEYFFDQISTGAFSDPPVPLNMAC 379

>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)|
           (Alpha-L-fucoside fucohydrolase 2)
           (Alpha-1,2-fucosidase) (AtFXG1)
          Length = 372

 Score = 87.0 bits (214), Expect = 3e-17
 Identities = 52/140 (37%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
 Frame = -3

Query: 546 AYLTXHPGRNSSDYDSVGCLKTYNEFAQRHNAMVQQKLQVLRLKYPKARIMYADYYGAAM 367
           AY+       +SD+DS GC+   N  AQ+ N  ++Q +  LR    +A I Y D Y    
Sbjct: 226 AYVIERFPNKASDFDSHGCVSPLNHLAQQFNHALKQAVIELRSSLSEAAITYVDVYSLKH 285

Query: 366 SFAKNPKQFGFKQGPLKTCCGGGGPYNFNPTASCG----VRGSSV-----CADPSAYANW 214
               + +  GFK G L +CCG GG YN+N    CG    V+G  V     C +P     W
Sbjct: 286 ELFVHAQGHGFK-GSLVSCCGHGGKYNYNKGIGCGMKKIVKGKEVYIGKPCDEPDKAVVW 344

Query: 213 DGVHLTEAAYHAIADSILHG 154
           DGVH T+AA   I D I  G
Sbjct: 345 DGVHFTQAANKFIFDKIAPG 364

>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor|
          Length = 534

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 32/106 (30%), Positives = 47/106 (44%)
 Frame = -3

Query: 492 CLKTYNEFAQRHNAMVQQKLQVLRLKYPKARIMYADYYGAAMSFAKNPKQFGFKQGPLKT 313
           C +  N  +Q  N+ +   L  L    P +  +Y D Y       + P  +GF++   K 
Sbjct: 419 CNEELNYASQLFNSKLLLILGQLSKTLPNSTFVYMDIYTIISQMLETPAAYGFEETK-KP 477

Query: 312 CCGGGGPYNFNPTASCGVRGSSVCADPSAYANWDGVHLTEAAYHAI 175
           CC  G     +  A C    S +C + S+Y  WDGVH T+ AY  I
Sbjct: 478 CCKTG---LLSAGALCKKSTSKICPNTSSYLFWDGVHPTQRAYKTI 520

>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)|
           (Fragment)
          Length = 449

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 4/107 (3%)
 Frame = -3

Query: 492 CLKTYNEFAQRHNAMVQQKLQVLRLKYPKARIMYADYYGAAMSFAKNPKQFGFKQGPLKT 313
           C +  N  AQ  N+ +   L  L    P + I+Y D Y       ++P+ +GF++   K 
Sbjct: 336 CNEDLNYAAQLFNSKLVIILGQLSKTLPNSTIVYGDIYSIFSKMLESPEDYGFEE-IKKP 394

Query: 312 CC----GGGGPYNFNPTASCGVRGSSVCADPSAYANWDGVHLTEAAY 184
           CC      GG +       C  R     ++ S+Y  WDG+H ++ AY
Sbjct: 395 CCKIGLTKGGVF-------CKERTLKNMSNASSYLFWDGLHPSQRAY 434

>TOP1_ARCFU (O28469) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)|
           (Omega-protein) (Relaxing enzyme) (Untwisting enzyme)
           (Swivelase)
          Length = 663

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 20/71 (28%), Positives = 38/71 (53%)
 Frame = -3

Query: 540 LTXHPGRNSSDYDSVGCLKTYNEFAQRHNAMVQQKLQVLRLKYPKARIMYADYYGAAMSF 361
           ++ H GR   D+ SVG ++T          +V ++L++   K  K   ++A++ G     
Sbjct: 180 ISVHSGRMGKDFLSVGRVQT-----PTLRLIVDRELEIQNFKPEKYYEIFAEFEG---FI 231

Query: 360 AKNPKQFGFKQ 328
           AK+PK++G K+
Sbjct: 232 AKHPKRYGSKE 242

>SNIP_RAT (Q9QXY2) p130Cas-associated protein (p140Cap) (SNAP-25-interacting|
           protein) (SNIP)
          Length = 1197

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
 Frame = +2

Query: 224 YADGSAHTLDPRTPQLA--VGLKLYGPPPPQHVFSGP 328
           Y DG    L P +PQ    V     GPPPP   +SGP
Sbjct: 496 YGDGYGFRLPPSSPQKLADVSAPSGGPPPPHSPYSGP 532

>SNIP_MOUSE (Q9QWI6) p130Cas-associated protein (p140Cap) (SNAP-25-interacting|
           protein) (SNIP)
          Length = 1250

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
 Frame = +2

Query: 224 YADGSAHTLDPRTPQLA--VGLKLYGPPPPQHVFSGP 328
           Y DG    L P +PQ    V     GPPPP   +SGP
Sbjct: 528 YGDGYGFRLPPSSPQKLADVSAPSGGPPPPHSPYSGP 564

>HMD1_CHICK (P46692) Homeobox protein CHOX-CAD|
          Length = 248

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 26/88 (29%), Positives = 35/88 (39%), Gaps = 10/88 (11%)
 Frame = -3

Query: 531 HPGRNSSDYDSVGCLKTYNEFAQRHNAMV-------QQKLQVLRLKYPKARIMYADYYGA 373
           HPG N +  + V     Y++FA  H+           Q        Y  A+  +  Y  A
Sbjct: 8   HPGLNLNPQNYVPGPPQYSDFASYHHVPGINNDPHHGQPAAAWGSPYTPAKEDWHSYGTA 67

Query: 372 AMSFAKNPKQFGFKQ---GPLKTCCGGG 298
           A S A NP QFGF      P++   G G
Sbjct: 68  AASAATNPGQFGFSPPDFNPMQPHAGSG 95

>SNIP_HUMAN (Q9C0H9) p130Cas-associated protein (p140Cap) (SNAP-25-interacting|
           protein) (SNIP)
          Length = 1055

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
 Frame = +2

Query: 224 YADGSAHTLDPRTPQLA--VGLKLYGPPPPQHVFSGP 328
           Y DG    L P +PQ    V     GPPPP   +SGP
Sbjct: 334 YGDGYGFRLPPSSPQKLADVAAPPGGPPPPHSPYSGP 370

>FIBL_GALME (Q26427) Fibroin light chain precursor (Fib-L) (L-fibroin) (PG-1)|
          Length = 267

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 12/32 (37%), Positives = 13/32 (40%)
 Frame = -3

Query: 378 GAAMSFAKNPKQFGFKQGPLKTCCGGGGPYNF 283
           G     A NP    +  GP   C GGG  Y F
Sbjct: 140 GLISQLASNPDSLRYSSGPAGNCAGGGRSYQF 171

>PMPD_CHLTR (O84818) Probable outer membrane protein pmpD precursor|
           (Polymorphic membrane protein D)
          Length = 1531

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 18/59 (30%), Positives = 29/59 (49%)
 Frame = -3

Query: 381 YGAAMSFAKNPKQFGFKQGPLKTCCGGGGPYNFNPTASCGVRGSSVCADPSAYANWDGV 205
           + AA+ F +N  Q   ++  L  CCGGG  +  + T+   + G+S     + YA   GV
Sbjct: 578 HNAAVVFEQNRLQCSEEEATLLGCCGGGAVHGMDSTS---IVGNSSVRFGNNYAMGQGV 633

>DIAP3_HUMAN (Q9NSV4) Protein diaphanous homolog 3 (Diaphanous-related formin-3)|
           (DRF3)
          Length = 1110

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 9/58 (15%)
 Frame = +2

Query: 233 GSAHTLDPRTPQLAVGLKLYGPPPP---------QHVFSGPCLNPNCLGFLAKDMAAP 379
           G+ H+  P  P L  G  +  PPPP         +  FSGP   P  LGFL    + P
Sbjct: 569 GTGHSALPPPPPLPSGGGVPPPPPPPPPPPLPGMRMPFSGPVPPPPPLGFLGGQNSPP 626

>SYS_CHLCV (Q821P2) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)|
           (SerRS)
          Length = 426

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = -3

Query: 501 SVGCLKTYNEFAQRHNAMVQQKLQVLRLKYP 409
           SVG L T++ F  +H+  + QKLQ+L  K P
Sbjct: 125 SVGALPTFS-FTPKHHVELNQKLQILDFKLP 154


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.316    0.131    0.378 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,087,410
Number of Sequences: 219361
Number of extensions: 953945
Number of successful extensions: 3370
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3361
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4430660157
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)