ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd26h02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009620.1| Triticum aestivum clone wre1n.pk0126.e11:fis, ful... 860 0.0
2dbj|AK111569.1| Oryza sativa (japonica cultivar-group) cDNA clon... 210 4e-51
3gb|AY112561.1| Zea mays CL39582_1 mRNA sequence 163 8e-37
4dbj|AK111837.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 3e-21
5gb|AC147427.2| Oryza sativa chromosome 3 B1394A07 genomic seque... 107 4e-20
6gb|AC128646.5| Oryza sativa chromosome 3 BAC OSJNBb0029I19 genom... 107 4e-20
7gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 107 4e-20
8dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 107 4e-20
9gb|AY112520.1| Zea mays CL889_1 mRNA sequence 80 1e-11
10dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 76 1e-10
11gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 76 1e-10
12emb|AL928780.5|CNS08CCA Oryza sativa chromosome 12, . BAC OSJNBa... 76 1e-10
13gb|AF475127.1| Triticum aestivum 18S subunit ribosomal protein m... 64 6e-07
14gb|AC183962.3| Pan troglodytes BAC clone CH251-711F5 from chromo... 42 2.1
15emb|AL590227.13| Human DNA sequence from clone RP11-343D24 on ch... 42 2.1
16gb|AC147332.2| Pan troglodytes BAC clone RP43-6C11 from chromoso... 42 2.1
17emb|AL713978.9| Mouse DNA sequence from clone RP23-159H8 on chro... 42 2.1
18dbj|AP002068.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 42 2.1
19ref|NM_124966.1| Arabidopsis thaliana unknown protein AT5G55840 ... 40 8.3
20gb|AC159273.4| Mus musculus BAC clone RP23-391G8 from chromosome... 40 8.3
21gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Ph... 40 8.3
22gb|AC112739.5| Rattus norvegicus 7 BAC CH230-108A12 (Children's ... 40 8.3
23gb|AY809924.1| Schistosoma japonicum SJCHGC02321 protein mRNA, p... 40 8.3
24gb|AC093662.4| Homo sapiens BAC clone RP11-477A19 from 7, comple... 40 8.3
25gb|AC147133.2| Pan troglodytes BAC clone CH251-372A19 from Y, co... 40 8.3
26ref|XM_810237.1| Trypanosoma cruzi strain CL Brener acyl-CoA deh... 40 8.3
27ref|XM_814523.1| Trypanosoma cruzi strain CL Brener acyl-CoA deh... 40 8.3
28gb|AC044798.7| Homo sapiens chromosome 16 clone RP11-22D3, compl... 40 8.3
29gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete seq... 40 8.3
30emb|AL512307.12| Human DNA sequence from clone RP11-285B6 on chr... 40 8.3
31emb|CR628337.1| Legionella pneumophila str. Lens complete genome 40 8.3
32emb|CR628336.1| Legionella pneumophila str. Paris complete genome 40 8.3
33emb|BX927156.1| Corynebacterium glutamicum ATCC 13032, IS finger... 40 8.3
34gb|CP000077.1| Sulfolobus acidocaldarius DSM 639, complete genome 40 8.3
35dbj|BS000642.2| Pan troglodytes chromosome Y clone: PTB-307G08, ... 40 8.3
36gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 40 8.3
37gb|AC159216.2| Pan troglodytes BAC clone CH251-477A18 from chrom... 40 8.3
38gb|AC016817.6| Homo sapiens chromosome 10 clone RP11-13G8, compl... 40 8.3
39gb|AC159034.2| Pan troglodytes BAC clone CH251-335D18 from chrom... 40 8.3
40gb|AC093469.11| Mus musculus chromosome 7, clone RP23-21I4, comp... 40 8.3
41gb|AC007614.7| Homo sapiens chromosome 16 clone RP11-491F9, comp... 40 8.3
42dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, compl... 40 8.3
43gb|AC146450.5| Pan troglodytes BAC clone clone CH251-552K12 from... 40 8.3
44emb|BX000984.7| Zebrafish DNA sequence from clone CH211-157C7, c... 40 8.3
45dbj|AB018120.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 8.3
46gb|AC006371.2|AC006371 Homo sapiens BAC clone RP11-304C24 from Y... 40 8.3
47gb|AC006561.8|AC006561 Homo sapiens 12 PAC RPCI3-474D1 (Roswell ... 40 8.3
48gb|AY449458.1| Oikopleura dioica clone BACOIKO002 4xj18, complet... 40 8.3
49gb|AE015927.1| Clostridium tetani E88, complete genome 40 8.3
50gb|AC087587.14| Homo sapiens 12 BAC CTC-465D4 (CalTech Human BAC... 40 8.3 
>gb|BT009620.1| Triticum aestivum clone wre1n.pk0126.e11:fis, full insert mRNA
           sequence
          Length = 862

 Score =  860 bits (434), Expect = 0.0
 Identities = 563/608 (92%), Gaps = 21/608 (3%)
 Strand = Plus / Minus

                                                                       
Query: 14  aactcatatacagacaaaagaatcaacatcttcagaatacagctttcgacgtgcatgctt 73
           ||||||||||||||||||||||||||||| | |||||||||||||||||| |||| ||||
Sbjct: 786 aactcatatacagacaaaagaatcaacatatccagaatacagctttcgacatgcaagctt 727

                                                                       
Query: 74  tccttggtgaaattccaaaaaa------cactttatgtgtctttgttcttccaggtcagg 127
           ||||||||||||||||||||||      ||||||||||||||||||||||||||||||||
Sbjct: 726 tccttggtgaaattccaaaaaaaaaaaacactttatgtgtctttgttcttccaggtcagg 667

                                                                       
Query: 128 cagcaaccaatcaccaaaggctggaaataccagtacatggtctttccaggtttttatata 187
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 666 cagcaaccaatcaccaaaggctggaaataccagtacatggtctttccaggttcttatata 607

                                                                       
Query: 188 gaacacaaaacaggtatacatcaggtgagaaacaatcattcaatttttcccaggtgtaat 247
           ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 606 gaacacaaaacaggtatacatcaggtgagaaacaacccttcaatttttcccaggtgtaat 547

                                                                       
Query: 248 tccgactacgacgttgctgaccagtttacccttttcgtcgacagtcatagggttctcaac 307
           ||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 546 tccaactacgacgttgctgaccagtttacccttttcgtcaactgtcatagggttctcaac 487

                                                                       
Query: 308 aacaacggttacattctggggctgagatgtgggaacagaagctgatgaagcattatatgc 367
           ||| ||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||
Sbjct: 486 aacgacggttacattctggggttgaggtgtgggaacagaagctgatgaggcattatatgc 427

                                                                       
Query: 368 agattcatttgatgtaggccttggacatggtgcaggtgacatggtgtttattccagtat- 426
           ||||||||||||||||||      |||||| || |||| |||||| ||||||||||||| 
Sbjct: 426 agattcatttgatgtagg------acatggcgcgggtggcatggtatttattccagtatt 373

                                                                       
Query: 427 --------tcgtgataaaatcgcagatggcacatttgacagaaggtgctccatgtggata 478
                   | |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tgtgatatttgtgatataatcgcagatggcacatttgacagaaggtgctccatgtggata 313

                                                                       
Query: 479 catcaaagttgtccggcaccgaccacaattcacgtgggctatattattgactggtctgac 538
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 312 catcaaagttgtccggcaccgaccacagttcacgtgggctatattattgactggtctgac 253

                                                                       
Query: 539 aagattgactgtactgcaacatgagcatctcacagtgtctgcattacgggtgtacatcag 598
           ||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 252 aagattgacagtactgcaacatgagcatctcacggtgcctgcattacgggtgtacatcag 193

                   
Query: 599 caaagttc 606
           ||||||||
Sbjct: 192 caaagttc 185
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>dbj|AK111569.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013071E13, full
           insert sequence
          Length = 1089

 Score =  210 bits (106), Expect = 4e-51
 Identities = 214/250 (85%)
 Strand = Plus / Minus

                                                                       
Query: 357 gcattatatgcagattcatttgatgtaggccttggacatggtgcaggtgacatggtgttt 416
           |||||||||| |||| || ||||||||||| ||||| |||| |  |||| ||  || || 
Sbjct: 626 gcattatatgaagatccacttgatgtaggcattggagatggcgtgggtgccacagtattc 567

                                                                       
Query: 417 attccagtattcgtgataaaatcgcagatggcacatttgacagaaggtgctccatgtgga 476
           ||||| || || |||||| ||| ||| ||||||||||||||||||||||| |||| ||||
Sbjct: 566 attccggtgtttgtgatataatggcatatggcacatttgacagaaggtgcgccatatgga 507

                                                                       
Query: 477 tacatcaaagttgtccggcaccgaccacaattcacgtgggctatattattgactggtctg 536
           ||||||||||| ||||||||| | |||||  |||| || ||||||||||| |||||||| 
Sbjct: 506 tacatcaaagtcgtccggcactggccacagctcacatgtgctatattattcactggtcta 447

                                                                       
Query: 537 acaagattgactgtactgcaacatgagcatctcacagtgtctgcattacgggtgtacatc 596
           |||||||||||||||||||||||||| |||||||||||||| ||||| || || ||||||
Sbjct: 446 acaagattgactgtactgcaacatgaacatctcacagtgtccgcattgcgagtatacatc 387

                     
Query: 597 agcaaagttc 606
           ||||| ||||
Sbjct: 386 agcaatgttc 377



 Score =  129 bits (65), Expect = 1e-26
 Identities = 98/109 (89%)
 Strand = Plus / Minus

                                                                       
Query: 233 tttcccaggtgtaattccgactacgacgttgctgaccagtttacccttttcgtcgacagt 292
           |||||||| ||||| ||| ||||| || ||||| ||||||||||||||||| || |||||
Sbjct: 780 tttcccagttgtaactccaactacaacattgctaaccagtttacccttttcatcaacagt 721

                                                            
Query: 293 catagggttctcaacaacaacggttacattctggggctgagatgtggga 341
           |||||||||||| |||||||||||||||||||||||  |||||||||||
Sbjct: 720 catagggttctcgacaacaacggttacattctggggtcgagatgtggga 672



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 67/82 (81%)
 Strand = Plus / Minus

                                                                       
Query: 16  ctcatatacagacaaaagaatcaacatcttcagaatacagctttcgacgtgcatgctttc 75
           |||||||||| | |||||||||||||  | || |||||| |||| | ||| ||| |||||
Sbjct: 980 ctcatatacaaagaaaagaatcaacagatacaaaatacaactttaggcgttcatactttc 921

                                 
Query: 76  cttggtgaaattccaaaaaaca 97
           ||| |  | |||||||||||||
Sbjct: 920 ctttgcaagattccaaaaaaca 899
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>gb|AY112561.1| Zea mays CL39582_1 mRNA sequence
          Length = 749

 Score =  163 bits (82), Expect = 8e-37
 Identities = 301/374 (80%)
 Strand = Plus / Plus

                                                                       
Query: 233 tttcccaggtgtaattccgactacgacgttgctgaccagtttacccttttcgtcgacagt 292
           |||||||| ||| | ||| ||||| ||| ||||||| ||||| ||||| || || || ||
Sbjct: 316 tttcccagctgtgactccaactacaacgctgctgacaagttttcccttgtcatcaactgt 375

                                                                       
Query: 293 catagggttctcaacaacaacggttacattctggggctgagatgtgggaacagaagctga 352
           ||||||||||||||||||||| ||||||||||| |  |||||| | ||| ||||||  ||
Sbjct: 376 catagggttctcaacaacaacagttacattctgagattgagatttaggagcagaagtaga 435

                                                                       
Query: 353 tgaagcattatatgcagattcatttgatgtaggccttggacatggtgcaggtgacatggt 412
           |||  || |||||| |||  ||| |||||| ||||| | | |||| |  |||| ||  ||
Sbjct: 436 tgagccactatatgaagacccatctgatgttggcctcgcagatggggtgggtgccacagt 495

                                                                       
Query: 413 gtttattccagtattcgtgataaaatcgcagatggcacatttgacagaaggtgctccatg 472
            |||| |||||||   |||| | ||| ||| | ||||||||| || |||||||| || | 
Sbjct: 496 atttactccagtagctgtgacataattgcatacggcacattttactgaaggtgcgccgta 555

                                                                       
Query: 473 tggatacatcaaagttgtccggcaccgaccacaattcacgtgggctatattattgactgg 532
           ||||||||||||||||||||||||| | || || ||||| || ||||||||||| |||||
Sbjct: 556 tggatacatcaaagttgtccggcactggccgcagttcacatgagctatattattcactgg 615

                                                                       
Query: 533 tctgacaagattgactgtactgcaacatgagcatctcacagtgtctgcattacgggtgta 592
           ||| ||||| || |||||  |||||||||| || || || ||||||||| | || || ||
Sbjct: 616 tctaacaaggttcactgtgttgcaacatgaacaccttacggtgtctgcactgcgagtata 675

                         
Query: 593 catcagcaaagttc 606
           ||||||||||||||
Sbjct: 676 catcagcaaagttc 689
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>dbj|AK111837.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023139G05, full
           insert sequence
          Length = 1182

 Score =  111 bits (56), Expect = 3e-21
 Identities = 113/132 (85%)
 Strand = Plus / Minus

                                                                       
Query: 420 ccagtattcgtgataaaatcgcagatggcacatttgacagaaggtgctccatgtggatac 479
           |||||||| || ||||||| |||||| ||||| ||||||||||||||||| | |||||||
Sbjct: 553 ccagtatttgtaataaaattgcagatagcacacttgacagaaggtgctccgtatggatac 494

                                                                       
Query: 480 atcaaagttgtccggcaccgaccacaattcacgtgggctatattattgactggtctgaca 539
           |||||   |||| ||||| | ||||| |||| ||| |||||| || | ||||||||||||
Sbjct: 493 atcaacactgtctggcactggccacagttcaagtgagctatactactcactggtctgaca 434

                       
Query: 540 agattgactgta 551
           ||||||||||||
Sbjct: 433 agattgactgta 422



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 61/74 (82%)
 Strand = Plus / Minus

                                                                       
Query: 252 actacgacgttgctgaccagtttacccttttcgtcgacagtcatagggttctcaacaaca 311
           ||||| |||||||| ||||  || |||||| | || || |||||||| || |||||||||
Sbjct: 706 actacaacgttgctcaccaactttccctttgcatctaccgtcataggattttcaacaaca 647

                         
Query: 312 acggttacattctg 325
           || || ||||||||
Sbjct: 646 acagtaacattctg 633
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>gb|AC147427.2| Oryza sativa chromosome 3  B1394A07 genomic sequence, complete sequence
          Length = 175704

 Score =  107 bits (54), Expect = 4e-20
 Identities = 69/74 (93%)
 Strand = Plus / Minus

                                                                          
Query: 267    accagtttacccttttcgtcgacagtcatagggttctcaacaacaacggttacattctgg 326
              ||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||
Sbjct: 173435 accagtttacccttttcatcaacagtcatagggttctcgacaacaacggttacattctgg 173376

                            
Query: 327    ggctgagatgtggg 340
              ||  ||||||||||
Sbjct: 173375 ggtcgagatgtggg 173362



 Score =  101 bits (51), Expect = 3e-18
 Identities = 90/103 (87%)
 Strand = Plus / Minus

                                                                          
Query: 429    gtgataaaatcgcagatggcacatttgacagaaggtgctccatgtggatacatcaaagtt 488
              |||||| ||| ||| ||||||||||||||||||||||| |||| ||||||||||||||| 
Sbjct: 173055 gtgatataatggcatatggcacatttgacagaaggtgcgccatatggatacatcaaagtc 172996

                                                         
Query: 489    gtccggcaccgaccacaattcacgtgggctatattattgactg 531
              ||||||||| | |||||  |||| || ||||||||||| ||||
Sbjct: 172995 gtccggcactggccacagctcacatgtgctatattattcactg 172953



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 71/78 (91%)
 Strand = Plus / Minus

                                                                          
Query: 529    ctggtctgacaagattgactgtactgcaacatgagcatctcacagtgtctgcattacggg 588
              ||||||| |||||||||||||||||||||||||| |||||||||||||| ||||| || |
Sbjct: 171829 ctggtctaacaagattgactgtactgcaacatgaacatctcacagtgtccgcattgcgag 171770

                                
Query: 589    tgtacatcagcaaagttc 606
              | ||||||||||| ||||
Sbjct: 171769 tatacatcagcaatgttc 171752



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 67/82 (81%)
 Strand = Plus / Minus

                                                                          
Query: 16     ctcatatacagacaaaagaatcaacatcttcagaatacagctttcgacgtgcatgctttc 75
              |||||||||| | |||||||||||||  | || |||||| |||| | ||| ||| |||||
Sbjct: 173770 ctcatatacaaagaaaagaatcaacagatacaaaatacaactttaggcgttcatactttc 173711

                                    
Query: 76     cttggtgaaattccaaaaaaca 97
              ||| |  | |||||||||||||
Sbjct: 173710 ctttgcaagattccaaaaaaca 173689



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                       
Query: 357    gcattatatgcagattcatttgatgtaggccttggacatgg 397
              |||||||||| |||| || ||||||||||| ||||| ||||
Sbjct: 173229 gcattatatgaagatccacttgatgtaggcattggagatgg 173189
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>gb|AC128646.5| Oryza sativa chromosome 3 BAC OSJNBb0029I19 genomic sequence, complete
             sequence
          Length = 120254

 Score =  107 bits (54), Expect = 4e-20
 Identities = 69/74 (93%)
 Strand = Plus / Minus

                                                                         
Query: 267   accagtttacccttttcgtcgacagtcatagggttctcaacaacaacggttacattctgg 326
             ||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||
Sbjct: 11532 accagtttacccttttcatcaacagtcatagggttctcgacaacaacggttacattctgg 11473

                           
Query: 327   ggctgagatgtggg 340
             ||  ||||||||||
Sbjct: 11472 ggtcgagatgtggg 11459



 Score =  101 bits (51), Expect = 3e-18
 Identities = 90/103 (87%)
 Strand = Plus / Minus

                                                                         
Query: 429   gtgataaaatcgcagatggcacatttgacagaaggtgctccatgtggatacatcaaagtt 488
             |||||| ||| ||| ||||||||||||||||||||||| |||| ||||||||||||||| 
Sbjct: 11152 gtgatataatggcatatggcacatttgacagaaggtgcgccatatggatacatcaaagtc 11093

                                                        
Query: 489   gtccggcaccgaccacaattcacgtgggctatattattgactg 531
             ||||||||| | |||||  |||| || ||||||||||| ||||
Sbjct: 11092 gtccggcactggccacagctcacatgtgctatattattcactg 11050



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 71/78 (91%)
 Strand = Plus / Minus

                                                                        
Query: 529  ctggtctgacaagattgactgtactgcaacatgagcatctcacagtgtctgcattacggg 588
            ||||||| |||||||||||||||||||||||||| |||||||||||||| ||||| || |
Sbjct: 9926 ctggtctaacaagattgactgtactgcaacatgaacatctcacagtgtccgcattgcgag 9867

                              
Query: 589  tgtacatcagcaaagttc 606
            | ||||||||||| ||||
Sbjct: 9866 tatacatcagcaatgttc 9849



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 67/82 (81%)
 Strand = Plus / Minus

                                                                         
Query: 16    ctcatatacagacaaaagaatcaacatcttcagaatacagctttcgacgtgcatgctttc 75
             |||||||||| | |||||||||||||  | || |||||| |||| | ||| ||| |||||
Sbjct: 11867 ctcatatacaaagaaaagaatcaacagatacaaaatacaactttaggcgttcatactttc 11808

                                   
Query: 76    cttggtgaaattccaaaaaaca 97
             ||| |  | |||||||||||||
Sbjct: 11807 ctttgcaagattccaaaaaaca 11786



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                      
Query: 357   gcattatatgcagattcatttgatgtaggccttggacatgg 397
             |||||||||| |||| || ||||||||||| ||||| ||||
Sbjct: 11326 gcattatatgaagatccacttgatgtaggcattggagatgg 11286
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  107 bits (54), Expect = 4e-20
 Identities = 69/74 (93%)
 Strand = Plus / Plus

                                                                            
Query: 267      accagtttacccttttcgtcgacagtcatagggttctcaacaacaacggttacattctgg 326
                ||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||
Sbjct: 24462425 accagtttacccttttcatcaacagtcatagggttctcgacaacaacggttacattctgg 24462484

                              
Query: 327      ggctgagatgtggg 340
                ||  ||||||||||
Sbjct: 24462485 ggtcgagatgtggg 24462498



 Score =  101 bits (51), Expect = 3e-18
 Identities = 90/103 (87%)
 Strand = Plus / Plus

                                                                            
Query: 429      gtgataaaatcgcagatggcacatttgacagaaggtgctccatgtggatacatcaaagtt 488
                |||||| ||| ||| ||||||||||||||||||||||| |||| ||||||||||||||| 
Sbjct: 24462805 gtgatataatggcatatggcacatttgacagaaggtgcgccatatggatacatcaaagtc 24462864

                                                           
Query: 489      gtccggcaccgaccacaattcacgtgggctatattattgactg 531
                ||||||||| | |||||  |||| || ||||||||||| ||||
Sbjct: 24462865 gtccggcactggccacagctcacatgtgctatattattcactg 24462907



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 71/78 (91%)
 Strand = Plus / Plus

                                                                            
Query: 529      ctggtctgacaagattgactgtactgcaacatgagcatctcacagtgtctgcattacggg 588
                ||||||| |||||||||||||||||||||||||| |||||||||||||| ||||| || |
Sbjct: 24464031 ctggtctaacaagattgactgtactgcaacatgaacatctcacagtgtccgcattgcgag 24464090

                                  
Query: 589      tgtacatcagcaaagttc 606
                | ||||||||||| ||||
Sbjct: 24464091 tatacatcagcaatgttc 24464108



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 67/82 (81%)
 Strand = Plus / Plus

                                                                            
Query: 16       ctcatatacagacaaaagaatcaacatcttcagaatacagctttcgacgtgcatgctttc 75
                |||||||||| | |||||||||||||  | || |||||| |||| | ||| ||| |||||
Sbjct: 24462090 ctcatatacaaagaaaagaatcaacagatacaaaatacaactttaggcgttcatactttc 24462149

                                      
Query: 76       cttggtgaaattccaaaaaaca 97
                ||| |  | |||||||||||||
Sbjct: 24462150 ctttgcaagattccaaaaaaca 24462171



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                         
Query: 357      gcattatatgcagattcatttgatgtaggccttggacatgg 397
                |||||||||| |||| || ||||||||||| ||||| ||||
Sbjct: 24462631 gcattatatgaagatccacttgatgtaggcattggagatgg 24462671
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  107 bits (54), Expect = 4e-20
 Identities = 69/74 (93%)
 Strand = Plus / Plus

                                                                            
Query: 267      accagtttacccttttcgtcgacagtcatagggttctcaacaacaacggttacattctgg 326
                ||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||
Sbjct: 24379894 accagtttacccttttcatcaacagtcatagggttctcgacaacaacggttacattctgg 24379953

                              
Query: 327      ggctgagatgtggg 340
                ||  ||||||||||
Sbjct: 24379954 ggtcgagatgtggg 24379967



 Score =  101 bits (51), Expect = 3e-18
 Identities = 90/103 (87%)
 Strand = Plus / Plus

                                                                            
Query: 429      gtgataaaatcgcagatggcacatttgacagaaggtgctccatgtggatacatcaaagtt 488
                |||||| ||| ||| ||||||||||||||||||||||| |||| ||||||||||||||| 
Sbjct: 24380274 gtgatataatggcatatggcacatttgacagaaggtgcgccatatggatacatcaaagtc 24380333

                                                           
Query: 489      gtccggcaccgaccacaattcacgtgggctatattattgactg 531
                ||||||||| | |||||  |||| || ||||||||||| ||||
Sbjct: 24380334 gtccggcactggccacagctcacatgtgctatattattcactg 24380376



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 71/78 (91%)
 Strand = Plus / Plus

                                                                            
Query: 529      ctggtctgacaagattgactgtactgcaacatgagcatctcacagtgtctgcattacggg 588
                ||||||| |||||||||||||||||||||||||| |||||||||||||| ||||| || |
Sbjct: 24381500 ctggtctaacaagattgactgtactgcaacatgaacatctcacagtgtccgcattgcgag 24381559

                                  
Query: 589      tgtacatcagcaaagttc 606
                | ||||||||||| ||||
Sbjct: 24381560 tatacatcagcaatgttc 24381577



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 67/82 (81%)
 Strand = Plus / Plus

                                                                            
Query: 16       ctcatatacagacaaaagaatcaacatcttcagaatacagctttcgacgtgcatgctttc 75
                |||||||||| | |||||||||||||  | || |||||| |||| | ||| ||| |||||
Sbjct: 24379559 ctcatatacaaagaaaagaatcaacagatacaaaatacaactttaggcgttcatactttc 24379618

                                      
Query: 76       cttggtgaaattccaaaaaaca 97
                ||| |  | |||||||||||||
Sbjct: 24379619 ctttgcaagattccaaaaaaca 24379640



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                         
Query: 357      gcattatatgcagattcatttgatgtaggccttggacatgg 397
                |||||||||| |||| || ||||||||||| ||||| ||||
Sbjct: 24380100 gcattatatgaagatccacttgatgtaggcattggagatgg 24380140
to top
>gb|AY112520.1| Zea mays CL889_1 mRNA sequence
          Length = 1158

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 106/128 (82%)
 Strand = Plus / Minus

                                                                       
Query: 447 gcacatttgacagaaggtgctccatgtggatacatcaaagttgtccggcaccgaccacaa 506
           |||||||||||||| |||||||| | ||||||||||||   |||  ||||| | ||||| 
Sbjct: 444 gcacatttgacagacggtgctccgtatggatacatcaacactgtttggcactggccacag 385

                                                                       
Query: 507 ttcacgtgggctatattattgactggtctgacaagattgactgtactgcaacatgagcat 566
           ||||| || |||||  || | |||||||||||||||||||||||    ||||||||||||
Sbjct: 384 ttcacatgagctatgctactcactggtctgacaagattgactgtgtcacaacatgagcat 325

                   
Query: 567 ctcacagt 574
           || |||||
Sbjct: 324 cttacagt 317
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 86/102 (84%)
 Strand = Plus / Plus

                                                                            
Query: 420      ccagtattcgtgataaaatcgcagatggcacatttgacagaaggtgctccatgtggatac 479
                |||||||| || ||||||| |||||| ||||| ||||||||||||||||| | |||||||
Sbjct: 25849757 ccagtatttgtaataaaattgcagatagcacacttgacagaaggtgctccgtatggatac 25849816

                                                          
Query: 480      atcaaagttgtccggcaccgaccacaattcacgtgggctata 521
                |||||   |||| ||||| | ||||| |||| ||| ||||||
Sbjct: 25849817 atcaacactgtctggcactggccacagttcaagtgagctata 25849858



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 529      ctggtctgacaagattgactgta 551
                |||||||||||||||||||||||
Sbjct: 25850648 ctggtctgacaagattgactgta 25850670
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 86/102 (84%)
 Strand = Plus / Plus

                                                                            
Query: 420      ccagtattcgtgataaaatcgcagatggcacatttgacagaaggtgctccatgtggatac 479
                |||||||| || ||||||| |||||| ||||| ||||||||||||||||| | |||||||
Sbjct: 25777933 ccagtatttgtaataaaattgcagatagcacacttgacagaaggtgctccgtatggatac 25777992

                                                          
Query: 480      atcaaagttgtccggcaccgaccacaattcacgtgggctata 521
                |||||   |||| ||||| | ||||| |||| ||| ||||||
Sbjct: 25777993 atcaacactgtctggcactggccacagttcaagtgagctata 25778034



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 529      ctggtctgacaagattgactgta 551
                |||||||||||||||||||||||
Sbjct: 25778824 ctggtctgacaagattgactgta 25778846
to top
>emb|AL928780.5|CNS08CCA Oryza sativa chromosome 12, . BAC OSJNBa0018C20 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 137492

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 86/102 (84%)
 Strand = Plus / Plus

                                                                         
Query: 420   ccagtattcgtgataaaatcgcagatggcacatttgacagaaggtgctccatgtggatac 479
             |||||||| || ||||||| |||||| ||||| ||||||||||||||||| | |||||||
Sbjct: 71208 ccagtatttgtaataaaattgcagatagcacacttgacagaaggtgctccgtatggatac 71267

                                                       
Query: 480   atcaaagttgtccggcaccgaccacaattcacgtgggctata 521
             |||||   |||| ||||| | ||||| |||| ||| ||||||
Sbjct: 71268 atcaacactgtctggcactggccacagttcaagtgagctata 71309



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 529   ctggtctgacaagattgactgta 551
             |||||||||||||||||||||||
Sbjct: 72099 ctggtctgacaagattgactgta 72121
to top
>gb|AF475127.1| Triticum aestivum 18S subunit ribosomal protein mRNA, partial cds
          Length = 465

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 62/72 (86%)
 Strand = Plus / Minus

                                                                       
Query: 410 ggtgtttattccagtattcgtgataaaatcgcagatggcacatttgacagaaggtgctcc 469
           |||||| |||||| | || || ||||||| |||||| ||||||||||| |||| ||||||
Sbjct: 279 ggtgttcattccaatgtttgtaataaaattgcagatagcacatttgaccgaagatgctcc 220

                       
Query: 470 atgtggatacat 481
           || |||||||||
Sbjct: 219 atatggatacat 208



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 64/77 (83%)
 Strand = Plus / Minus

                                                                       
Query: 249 ccgactacgacgttgctgaccagtttacccttttcgtcgacagtcatagggttctcaaca 308
           ||||||||||||||||| |||| ||| ||||| || || || ||||| ||||| || || 
Sbjct: 440 ccgactacgacgttgctcaccaatttccccttgtcatctactgtcattgggttttcgacg 381

                            
Query: 309 acaacggttacattctg 325
           || || |||||||||||
Sbjct: 380 accaccgttacattctg 364



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 529 ctggtctgacaagattgactgtactgcaacatgagcatctcacagt 574
           |||||||| |||| |||||||||   |||||||||||||| |||||
Sbjct: 151 ctggtctggcaaggttgactgtatcacaacatgagcatctgacagt 106
to top
>gb|AC183962.3| Pan troglodytes BAC clone CH251-711F5 from chromosome 6, complete
              sequence
          Length = 196547

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 177    gtttttatatagaacacaaaa 197
              |||||||||||||||||||||
Sbjct: 148335 gtttttatatagaacacaaaa 148315
to top
>emb|AL590227.13| Human DNA sequence from clone RP11-343D24 on chromosome 6 Contains a
             glyceraldehyde-3-phosphate dehydrogenase (GAPD) pseudogene
             and a novel gene, complete sequence
          Length = 138027

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 177   gtttttatatagaacacaaaa 197
             |||||||||||||||||||||
Sbjct: 52250 gtttttatatagaacacaaaa 52230
to top
>gb|AC147332.2| Pan troglodytes BAC clone RP43-6C11 from chromosome 7, complete
             sequence
          Length = 23935

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 228   caatttttcccaggtgtaatt 248
             |||||||||||||||||||||
Sbjct: 19530 caatttttcccaggtgtaatt 19510
to top
>emb|AL713978.9| Mouse DNA sequence from clone RP23-159H8 on chromosome X, complete
              sequence
          Length = 183455

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 19     atatacagacaaaagaatcaa 39
              |||||||||||||||||||||
Sbjct: 116319 atatacagacaaaagaatcaa 116299
to top
>dbj|AP002068.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone: T8O3
          Length = 54386

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 77   ttggtgaaattccaaaaaaca 97
            |||||||||||||||||||||
Sbjct: 3242 ttggtgaaattccaaaaaaca 3222
to top
>ref|NM_124966.1| Arabidopsis thaliana unknown protein AT5G55840 mRNA, complete cds
          Length = 3825

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 191  cacaaaacaggtatacatca 210
            ||||||||||||||||||||
Sbjct: 2073 cacaaaacaggtatacatca 2054
to top
>gb|AC159273.4| Mus musculus BAC clone RP23-391G8 from chromosome 7, complete sequence
          Length = 227709

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 392   acatggtgcaggtgacatgg 411
             ||||||||||||||||||||
Sbjct: 54918 acatggtgcaggtgacatgg 54937
to top
>gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Philadelphia 1, complete
               genome
          Length = 3397754

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 346     aagctgatgaagcattatat 365
               ||||||||||||||||||||
Sbjct: 2375354 aagctgatgaagcattatat 2375335
to top
>gb|AC112739.5| Rattus norvegicus 7 BAC CH230-108A12 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 234420

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 333    gatgtgggaacagaagctga 352
              ||||||||||||||||||||
Sbjct: 111220 gatgtgggaacagaagctga 111239
to top
>gb|AY809924.1| Schistosoma japonicum SJCHGC02321 protein mRNA, partial cds
          Length = 1298

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 82   gaaattccaaaaaacacttt 101
            ||||||||||||||||||||
Sbjct: 1100 gaaattccaaaaaacacttt 1081
to top
>gb|AC093662.4| Homo sapiens BAC clone RP11-477A19 from 7, complete sequence
          Length = 48279

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 178   tttttatatagaacacaaaa 197
             ||||||||||||||||||||
Sbjct: 42002 tttttatatagaacacaaaa 42021
to top
>gb|AC147133.2| Pan troglodytes BAC clone CH251-372A19 from Y, complete sequence
          Length = 192074

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 327    ggctgagatgtgggaacaga 346
              ||||||||||||||||||||
Sbjct: 166669 ggctgagatgtgggaacaga 166650
to top
>ref|XM_810237.1| Trypanosoma cruzi strain CL Brener acyl-CoA dehydrogenase
           (Tc00.1047053509153.120) partial mRNA
          Length = 1206

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 231 tttttcccaggtgtaattcc 250
           ||||||||||||||||||||
Sbjct: 653 tttttcccaggtgtaattcc 634
to top
>ref|XM_814523.1| Trypanosoma cruzi strain CL Brener acyl-CoA dehydrogenase
           (Tc00.1047053510303.290) partial mRNA
          Length = 1206

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 231 tttttcccaggtgtaattcc 250
           ||||||||||||||||||||
Sbjct: 653 tttttcccaggtgtaattcc 634
to top
>gb|AC044798.7| Homo sapiens chromosome 16 clone RP11-22D3, complete sequence
          Length = 165651

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 330   tgagatgtgggaacagaagc 349
             ||||||||||||||||||||
Sbjct: 47008 tgagatgtgggaacagaagc 47027
to top
>gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete sequence
          Length = 3281944

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 437     atcgcagatggcacatttga 456
               ||||||||||||||||||||
Sbjct: 2589014 atcgcagatggcacatttga 2588995
to top
>emb|AL512307.12| Human DNA sequence from clone RP11-285B6 on chromosome 1 Contains part of
              the RGS7 gene for regulator of G-protein signalling 7,
              complete sequence
          Length = 182323

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 99     tttatgtgtctttgttcttc 118
              ||||||||||||||||||||
Sbjct: 150383 tttatgtgtctttgttcttc 150402
to top
>emb|CR628337.1| Legionella pneumophila str. Lens complete genome
          Length = 3345687

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 346     aagctgatgaagcattatat 365
               ||||||||||||||||||||
Sbjct: 2318924 aagctgatgaagcattatat 2318905
to top
>emb|CR628336.1| Legionella pneumophila str. Paris complete genome
          Length = 3503610

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 346     aagctgatgaagcattatat 365
               ||||||||||||||||||||
Sbjct: 2345300 aagctgatgaagcattatat 2345281
to top
>emb|BX927156.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5, complete
              genome; segment 9/10
          Length = 349115

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 399    gcaggtgacatggtgtttat 418
              ||||||||||||||||||||
Sbjct: 310862 gcaggtgacatggtgtttat 310881
to top
>gb|CP000077.1| Sulfolobus acidocaldarius DSM 639, complete genome
          Length = 2225959

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 328     gctgagatgtgggaacagaa 347
               ||||||||||||||||||||
Sbjct: 1439210 gctgagatgtgggaacagaa 1439191
to top
>dbj|BS000642.2| Pan troglodytes chromosome Y clone: PTB-307G08, complete sequence
          Length = 162472

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 327   ggctgagatgtgggaacaga 346
             ||||||||||||||||||||
Sbjct: 36056 ggctgagatgtgggaacaga 36037
to top
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 327      ggctgagatgtgggaacaga 346
                ||||||||||||||||||||
Sbjct: 18871350 ggctgagatgtgggaacaga 18871369
to top
>gb|AC159216.2| Pan troglodytes BAC clone CH251-477A18 from chromosome unknown, complete
              sequence
          Length = 206361

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 347    agctgatgaagcattatatgcaga 370
              |||||||||||||||| |||||||
Sbjct: 189599 agctgatgaagcattaaatgcaga 189622
to top
>gb|AC016817.6| Homo sapiens chromosome 10 clone RP11-13G8, complete sequence
          Length = 159981

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 347   agctgatgaagcattatatgcaga 370
             |||||||||||||||| |||||||
Sbjct: 61304 agctgatgaagcattaaatgcaga 61281
to top
>gb|AC159034.2| Pan troglodytes BAC clone CH251-335D18 from chromosome unknown, complete
              sequence
          Length = 170276

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 347    agctgatgaagcattatatgcaga 370
              |||||||||||||||| |||||||
Sbjct: 110069 agctgatgaagcattaaatgcaga 110046
to top
>gb|AC093469.11| Mus musculus chromosome 7, clone RP23-21I4, complete sequence
          Length = 215022

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 392    acatggtgcaggtgacatgg 411
              ||||||||||||||||||||
Sbjct: 211820 acatggtgcaggtgacatgg 211839
to top
>gb|AC007614.7| Homo sapiens chromosome 16 clone RP11-491F9, complete sequence
          Length = 192347

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 330    tgagatgtgggaacagaagc 349
              ||||||||||||||||||||
Sbjct: 187937 tgagatgtgggaacagaagc 187956
to top
>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome
          Length = 3309401

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 399     gcaggtgacatggtgtttat 418
               ||||||||||||||||||||
Sbjct: 3131142 gcaggtgacatggtgtttat 3131161
to top
>gb|AC146450.5| Pan troglodytes BAC clone clone CH251-552K12 from y, complete sequence
          Length = 172072

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 327   ggctgagatgtgggaacaga 346
             ||||||||||||||||||||
Sbjct: 82150 ggctgagatgtgggaacaga 82131
to top
>emb|BX000984.7| Zebrafish DNA sequence from clone CH211-157C7, complete sequence
          Length = 160029

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 178    tttttatatagaacacaaaa 197
              ||||||||||||||||||||
Sbjct: 110802 tttttatatagaacacaaaa 110821
to top
>dbj|AB018120.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MWJ3
          Length = 42356

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 191  cacaaaacaggtatacatca 210
            ||||||||||||||||||||
Sbjct: 5353 cacaaaacaggtatacatca 5334
to top
>gb|AC006371.2|AC006371 Homo sapiens BAC clone RP11-304C24 from Y, complete sequence
          Length = 202354

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 327   ggctgagatgtgggaacaga 346
             ||||||||||||||||||||
Sbjct: 60083 ggctgagatgtgggaacaga 60102
to top
>gb|AC006561.8|AC006561 Homo sapiens 12 PAC RPCI3-474D1 (Roswell Park Cancer Institute Human
             PAC Library) complete sequence
          Length = 60801

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 180   tttatatagaacacaaaacaggta 203
             |||||||| |||||||||||||||
Sbjct: 29208 tttatatataacacaaaacaggta 29231
to top
>gb|AY449458.1| Oikopleura dioica clone BACOIKO002 4xj18, complete sequence
          Length = 188193

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 261    ttgctgaccagtttacccttttcgtcga 288
              ||||||||||||||||| ||||| ||||
Sbjct: 175814 ttgctgaccagtttaccgttttcctcga 175787
to top
>gb|AE015927.1| Clostridium tetani E88, complete genome
          Length = 2799251

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 29      aaaagaatcaacatcttcag 48
               ||||||||||||||||||||
Sbjct: 1352317 aaaagaatcaacatcttcag 1352298
to top
>gb|AC087587.14| Homo sapiens 12 BAC CTC-465D4 (CalTech Human BAC Library C) complete
              sequence
          Length = 198842

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 353    tgaagcattatatgcagattcatt 376
              ||||||| ||||||||||||||||
Sbjct: 147126 tgaagcaatatatgcagattcatt 147103


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,915,128
Number of Sequences: 3902068
Number of extensions: 5915128
Number of successful extensions: 123066
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 122555
Number of HSP's gapped (non-prelim): 508
length of query: 607
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 584
effective length of database: 17,143,297,704
effective search space: 10011685859136
effective search space used: 10011685859136
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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