Clone Name | rbasd26g22 |
---|---|
Clone Library Name | barley_pub |
>BLT4_HORVU (P25307) BLT4 protein precursor| Length = 130 Score = 59.3 bits (142), Expect = 2e-09 Identities = 29/29 (100%), Positives = 29/29 (100%) Frame = -3 Query: 286 TRSAPVSTALRSTDRTRAPHISSDRRLVG 200 TRSAPVSTALRSTDRTRAPHISSDRRLVG Sbjct: 102 TRSAPVSTALRSTDRTRAPHISSDRRLVG 130
>NLTP8_HORVU (Q43871) Nonspecific lipid-transfer protein Cw18 precursor (LTP| Cw-18) (PKG2316) Length = 115 Score = 32.0 bits (71), Expect = 0.40 Identities = 16/21 (76%), Positives = 16/21 (76%) Frame = -2 Query: 311 RCSGPHARYTISASVDCSKIH 249 RC G YTISASVDCSKIH Sbjct: 96 RC-GVSVPYTISASVDCSKIH 115
>LYST_HUMAN (Q99698) Lysosomal trafficking regulator (Beige homolog)| Length = 3801 Score = 30.8 bits (68), Expect = 0.89 Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 2/47 (4%) Frame = +1 Query: 121 TSSPLSLMEIITEDLFMYMYICVCDLNLPSVDRWRYG--EHVFDQWI 255 +SSP L+E +T+ +Y IC+ +LNL S + + HVF+ ++ Sbjct: 1251 SSSPNDLLENLTQGEIIYPEICMLELNLLSASKAKLDVLAHVFESFL 1297
>Y580_CLOAB (Q97LI1) UPF0229 protein CAC0580| Length = 391 Score = 29.3 bits (64), Expect = 2.6 Identities = 14/34 (41%), Positives = 23/34 (67%) Frame = +1 Query: 145 EIITEDLFMYMYICVCDLNLPSVDRWRYGEHVFD 246 E+ E++F Y+ + DLNLP++D+ +Y E V D Sbjct: 116 EVTIEEVFSYL---LEDLNLPNLDKKKYSEIVTD 146
>VP13A_HUMAN (Q96RL7) Vacuolar protein sorting 13A (Chorein)| (Chorea-acanthocytosis protein) Length = 3174 Score = 29.3 bits (64), Expect = 2.6 Identities = 17/65 (26%), Positives = 28/65 (43%) Frame = -2 Query: 317 ALRCSGPHARYTISASVDCSKIH*SNTCSPYLQRSTLGRLRSHTHIYIYMNKSSVMISMR 138 A++C G Y + ++D S + + R+ + T Y+ NKS IS+ Sbjct: 2282 AVKCKGLKMDYQVGVTIDLSSFN-------------ITRIVTFTPFYMIKNKSKYHISVA 2328 Query: 137 ERGED 123 E G D Sbjct: 2329 EEGND 2333
>MINC_ECOLI (P18196) Septum site-determining protein minC| Length = 231 Score = 28.5 bits (62), Expect = 4.4 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 8/47 (17%) Frame = -3 Query: 295 TRATRSAPVSTALRSTDRTRAP--------HISSDRRLVG*GHIHIY 179 T T++ + T +RS R AP H+S+ L+ G+IH+Y Sbjct: 120 TPVTKTRLIDTPVRSGQRIYAPQCDLIVTSHVSAGAELIADGNIHVY 166
>MINC_ECOL6 (Q8FI31) Septum site-determining protein minC| Length = 231 Score = 28.5 bits (62), Expect = 4.4 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 8/47 (17%) Frame = -3 Query: 295 TRATRSAPVSTALRSTDRTRAP--------HISSDRRLVG*GHIHIY 179 T T++ + T +RS R AP H+S+ L+ G+IH+Y Sbjct: 120 TPVTKTRLIDTPVRSGQRIYAPQCDLIVTSHVSAGAELIADGNIHVY 166
>MINC_ECO57 (Q8XDN0) Septum site-determining protein minC| Length = 231 Score = 28.5 bits (62), Expect = 4.4 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 8/47 (17%) Frame = -3 Query: 295 TRATRSAPVSTALRSTDRTRAP--------HISSDRRLVG*GHIHIY 179 T T++ + T +RS R AP H+S+ L+ G+IH+Y Sbjct: 120 TPVTKTRLIDTPVRSGQRIYAPQCDLIVTSHVSAGAELIADGNIHVY 166
>HISX_SALPA (Q5PDP3) Histidinol dehydrogenase (EC 1.1.1.23) (HDH)| Length = 434 Score = 28.1 bits (61), Expect = 5.8 Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Frame = -2 Query: 242 NTCSPYLQRSTLGRLRSHTHIYIYMNKSSVMISMRERGEDV-R*ASSTWPLTVVSVL 75 N+CSP QR+ L R I S ++ +++ RG+DV R S+ + T V+ L Sbjct: 10 NSCSPEQQRALLTRPAISASDSITRTVSDILYNVKTRGDDVLREYSAKFDKTEVTAL 66
>PHLX_RABIT (Q05017) Phospholipase AdRab-B precursor (EC 3.1.-.-)| Length = 1458 Score = 28.1 bits (61), Expect = 5.8 Identities = 16/52 (30%), Positives = 29/52 (55%) Frame = -1 Query: 243 EHVLPISPAIDAW*VEVTYTYIHIHE*ILCYDLHERERGGRTLSQLYMAAHC 88 E+V I A+D E+ T++++ E + LH+ ++GGR + L +HC Sbjct: 1227 EYVQHIQQALDVLYEELPRTFVNVVEVMELAGLHQ-DQGGRCATLLAAQSHC 1277
>YFNF_BACSU (O06484) Hypothetical protein yfnF| Length = 303 Score = 27.7 bits (60), Expect = 7.6 Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 2/30 (6%) Frame = +1 Query: 160 DLFMYMYICVCDLNLPSVD--RWRYGEHVF 243 D ++ VCD+ P V+ W YG+H F Sbjct: 197 DYMSELFPNVCDITTPGVNIGHWNYGQHTF 226
>ZEST_DROME (P09956) Regulatory protein zeste| Length = 574 Score = 27.3 bits (59), Expect = 9.9 Identities = 13/35 (37%), Positives = 21/35 (60%) Frame = -1 Query: 234 LPISPAIDAW*VEVTYTYIHIHE*ILCYDLHERER 130 LP++P A EV YT H+HE ++ D+ R++ Sbjct: 49 LPLTPRFTAEEKEVLYTLFHLHEEVI--DIKHRKK 81
>MINC_SHIFL (Q7UCU1) Septum site-determining protein minC| Length = 231 Score = 27.3 bits (59), Expect = 9.9 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 8/44 (18%) Frame = -3 Query: 286 TRSAPVSTALRSTDRTRAP--------HISSDRRLVG*GHIHIY 179 T++ + T +RS R AP H+S+ L+ G+IH+Y Sbjct: 123 TKTRLIDTPVRSGQRIYAPQCDLIVTSHVSAGAELIADGNIHVY 166 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 46,360,625 Number of Sequences: 219361 Number of extensions: 893176 Number of successful extensions: 2252 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 2228 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2251 length of database: 80,573,946 effective HSP length: 81 effective length of database: 62,805,705 effective search space used: 1507336920 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)