ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd26g21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC108871.3| Oryza sativa (japonica cultivar-group) chromosome... 139 1e-29
2dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 139 1e-29
3dbj|AK104853.1| Oryza sativa (japonica cultivar-group) cDNA clon... 139 1e-29
4gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 139 1e-29
5gb|AY323129.1| Oryza sativa (japonica cultivar-group) putative R... 137 5e-29
6dbj|AK068493.1| Oryza sativa (japonica cultivar-group) cDNA clon... 131 3e-27
7gb|BT018556.1| Zea mays clone EL01N0439F08.d mRNA sequence 121 3e-24
8emb|AL445675.9| Human DNA sequence from clone RP11-498M14 on chr... 44 0.54
9gb|AY842547.1| Sus scrofa isolate KNP69 sex determining region Y... 42 2.1
10gb|AY842546.1| Sus scrofa isolate KNP49 sex determining region Y... 42 2.1
11gb|AY842545.1| Sus scrofa isolate KNP48 sex determining region Y... 42 2.1
12gb|AY842544.1| Sus scrofa coreanus isolate KS37 sex determining ... 42 2.1
13gb|AY842543.1| Sus scrofa coreanus isolate KS34 sex determining ... 42 2.1
14gb|AY842542.1| Sus scrofa coreanus isolate KWB6 sex determining ... 42 2.1
15gb|AY842541.1| Sus scrofa coreanus isolate KWB3 sex determining ... 42 2.1
16gb|AY842540.1| Sus scrofa isolate JNP15 sex determining region Y... 42 2.1
17gb|AY842539.1| Sus scrofa isolate JNP10 sex determining region Y... 42 2.1
18gb|AY842538.1| Sus scrofa isolate JNP6 sex determining region Y ... 42 2.1
19gb|AY842537.1| Sus scrofa isolate JNP3 sex determining region Y ... 42 2.1
20gb|AY842536.1| Sus scrofa isolate JNP1 sex determining region Y ... 42 2.1
21gb|AY842535.1| Sus scrofa isolate CP2S sex determining region Y ... 42 2.1
22gb|AY842534.1| Sus scrofa isolate CN1S sex determining region Y ... 42 2.1
23gb|AY842533.1| Sus scrofa isolate CW5S sex determining region Y ... 42 2.1
24gb|AY842532.1| Sus scrofa isolate CJ1S sex determining region Y ... 42 2.1
25gb|AY842531.1| Sus scrofa isolate Y0330 sex determining region Y... 42 2.1
26gb|AY842530.1| Sus scrofa isolate L0333 sex determining region Y... 42 2.1
27gb|AY842529.1| Sus scrofa isolate H69-3 sex determining region Y... 42 2.1
28gb|AY842528.1| Sus scrofa isolate D03154 sex determining region ... 42 2.1
29gb|AY842527.1| Sus scrofa isolate B0453 sex determining region Y... 42 2.1
30gb|AC099884.12| Mus musculus chromosome 15, clone RP23-11F24, co... 42 2.1
31emb|CT025402.2| Xenopus tropicalis finished cDNA, clone TGas023b12 42 2.1
32gb|AC126550.3| Mus musculus BAC clone RP24-405L5 from chromosome... 42 2.1
33gb|AC025456.7| Homo sapiens chromosome 5 clone CTD-2197O4, compl... 42 2.1
34gb|AC150799.4| Medicago truncatula chromosome 2 BAC clone mth2-4... 42 2.1
35gb|U49860.1|SSU49860 Sus scrofa SRY protein (SRY) gene, complete... 42 2.1
36gb|AC026437.5|AC026437 Homo sapiens chromosome 5 clone CTD-2251O... 42 2.1
37ref|NM_214452.1| Sus scrofa sex determining region Y (SRY), mRNA 42 2.1
38emb|BX004850.11| Zebrafish DNA sequence from clone CH211-51M24 i... 42 2.1
39emb|AL935202.7| Zebrafish DNA sequence from clone CH211-197E11, ... 42 2.1
40emb|AL935279.5| Zebrafish DNA sequence from clone CH211-195M9 in... 42 2.1
41gb|AC119980.7| Mus musculus chromosome 8, clone RP24-495J19, com... 40 8.4
42ref|XM_460737.1| Debaryomyces hansenii CBS767 hypothetical prote... 40 8.4
43gb|AC117662.13| Mus musculus chromosome 16, clone RP23-351D19, c... 40 8.4
44gb|AC002487.1| Homo sapiens BAC clone CTA-369K23 from 7, complet... 40 8.4
45ref|XM_961186.1| Plasmodium falciparum 3D7 hypothetical protein ... 40 8.4
46ref|XM_500780.1| Yarrowia lipolytica CLIB122, YALI0B11924g predi... 40 8.4
47emb|AL365184.12| Human DNA sequence from clone RP11-80B9 on chro... 40 8.4
48emb|AL138822.13| Human DNA sequence from clone RP11-57H24 on chr... 40 8.4
49ref|XM_776814.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 8.4
50emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS... 40 8.4
51emb|CR382401.1| Plasmodium falciparum chromosome 6, complete seq... 40 8.4
52emb|AL929351.1|PFA929351 Plasmodium falciparum strain 3D7, chrom... 40 8.4
53emb|AJ002594.1|PFRNASUB1 Plasmodium falciparum mRNA for subtilis... 40 8.4
54emb|AJ002233.1|PFJ002233 Plasmodium falciparum genomic gene for ... 40 8.4
55gb|AC024257.25| Homo sapiens 12 BAC RP11-370I10 (Roswell Park Ca... 40 8.4
56gb|AC069353.9| Homo sapiens chromosome 8, clone RP11-37B2, compl... 40 8.4
57emb|BX927196.10| Zebrafish DNA sequence from clone DKEY-121D19 i... 40 8.4
58gb|AC159188.2| Mus musculus BAC clone RP24-247J24 from chromosom... 40 8.4
59emb|BX572647.10| Zebrafish DNA sequence from clone CH211-149N1 i... 40 8.4
60gb|AC099816.2| Homo sapiens, clone RP11-18K20, complete sequence 40 8.4
61gb|AC107326.4| Drosophila melanogaster X BAC RP98-33A8 (Roswell ... 40 8.4
62gb|AC174221.4| Mus musculus BAC clone RP24-237K1 from chromosome... 40 8.4
63gb|AC154285.2| Mus musculus BAC clone RP23-452P8 from chromosome... 40 8.4
64gb|AC145578.5| Mus musculus BAC clone RP24-108H11 from chromosom... 40 8.4
65gb|AC007978.15|AC007978 Mus musculus BAC MGS3-335O7 (Genome Sys... 40 8.4
66gb|AC133477.2| Homo sapiens 3 BAC RP11-364M20 (Roswell Park Canc... 40 8.4
67gb|AC154232.1| Mus musculus BAC clone RP24-340J3 from chromosome... 40 8.4
68emb|BX649445.5| Zebrafish DNA sequence from clone DKEY-177H9 in ... 40 8.4
69emb|AL845419.18| Zebrafish DNA sequence from clone CH211-198O19 ... 40 8.4
70emb|CR848045.10| Zebrafish DNA sequence from clone DKEY-8K3 in l... 40 8.4
71gb|AE003421.2| Drosophila melanogaster chromosome X, section 5 o... 40 8.4
72emb|CT030705.12| Mouse DNA sequence from clone RP23-118N11 on ch... 40 8.4
73gb|CP000102.1| Methanosphaera stadtmanae DSM 3091, complete genome 40 8.4
74emb|AL935147.9| Mouse DNA sequence from clone RP23-33O19 on chro... 40 8.4
75emb|AL929307.8| Zebrafish DNA sequence from clone CH211-85A24 in... 40 8.4
76emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB1... 40 8.4
77emb|AL928881.4| Zebrafish DNA sequence from clone CH211-180J19, ... 40 8.4
78emb|AL009189.1|DMC25D2 Drosophila melanogaster cosmid clone 25D2 40 8.4 
>gb|AC108871.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBb0077M24, complete sequence
          Length = 128920

 Score =  139 bits (70), Expect = 1e-29
 Identities = 156/184 (84%), Gaps = 3/184 (1%)
 Strand = Plus / Plus

                                                                         
Query: 422   tttcagtaaccctctcattgcttggttctgtagtgggacaaacttcagaagcagatgttg 481
             |||| ||||| ||||||||||||| ||||||| |||||  |||||||||||  ||| |||
Sbjct: 61945 tttctgtaactctctcattgcttgattctgtactgggaataacttcagaagtggatattg 62004

                                                                         
Query: 482   ttgggctatagcttggtctacca---cttcctctagtttccaaacgctccatcatcctcg 538
              ||||| ||  |||| |||||||   || ||||||||||||| ||||||||||||||| |
Sbjct: 62005 ctgggccatcacttgttctaccattactacctctagtttccagacgctccatcatccttg 62064

                                                                         
Query: 539   atacagatgcaattccattgttaacttctcgtctcacttcagaaccaagatcagacacag 598
             |||| ||||||||||||   |||||||||| ||| ||||||||||||||||| | |||||
Sbjct: 62065 atacggatgcaattccagcattaacttctcttcttacttcagaaccaagatctgccacag 62124

                 
Query: 599   atga 602
             ||||
Sbjct: 62125 atga 62128



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 186   atcaaaccaatacatcaaatt 206
             |||||||||||||||||||||
Sbjct: 61334 atcaaaccaatacatcaaatt 61354
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  139 bits (70), Expect = 1e-29
 Identities = 156/184 (84%), Gaps = 3/184 (1%)
 Strand = Plus / Plus

                                                                            
Query: 422      tttcagtaaccctctcattgcttggttctgtagtgggacaaacttcagaagcagatgttg 481
                |||| ||||| ||||||||||||| ||||||| |||||  |||||||||||  ||| |||
Sbjct: 20626937 tttctgtaactctctcattgcttgattctgtactgggaataacttcagaagtggatattg 20626996

                                                                            
Query: 482      ttgggctatagcttggtctacca---cttcctctagtttccaaacgctccatcatcctcg 538
                 ||||| ||  |||| |||||||   || ||||||||||||| ||||||||||||||| |
Sbjct: 20626997 ctgggccatcacttgttctaccattactacctctagtttccagacgctccatcatccttg 20627056

                                                                            
Query: 539      atacagatgcaattccattgttaacttctcgtctcacttcagaaccaagatcagacacag 598
                |||| ||||||||||||   |||||||||| ||| ||||||||||||||||| | |||||
Sbjct: 20627057 atacggatgcaattccagcattaacttctcttcttacttcagaaccaagatctgccacag 20627116

                    
Query: 599      atga 602
                ||||
Sbjct: 20627117 atga 20627120



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 186      atcaaaccaatacatcaaatt 206
                |||||||||||||||||||||
Sbjct: 20626326 atcaaaccaatacatcaaatt 20626346
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>dbj|AK104853.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-B04, full
           insert sequence
          Length = 742

 Score =  139 bits (70), Expect = 1e-29
 Identities = 156/184 (84%), Gaps = 3/184 (1%)
 Strand = Plus / Minus

                                                                       
Query: 422 tttcagtaaccctctcattgcttggttctgtagtgggacaaacttcagaagcagatgttg 481
           |||| ||||| ||||||||||||| ||||||| |||||  |||||||||||  ||| |||
Sbjct: 364 tttctgtaactctctcattgcttgattctgtactgggaataacttcagaagtggatattg 305

                                                                       
Query: 482 ttgggctatagcttggtctacca---cttcctctagtttccaaacgctccatcatcctcg 538
            ||||| ||  |||| |||||||   || ||||||||||||| ||||||||||||||| |
Sbjct: 304 ctgggccatcacttgttctaccattactacctctagtttccagacgctccatcatccttg 245

                                                                       
Query: 539 atacagatgcaattccattgttaacttctcgtctcacttcagaaccaagatcagacacag 598
           |||| ||||||||||||   |||||||||| ||| ||||||||||||||||| | |||||
Sbjct: 244 atacggatgcaattccagcattaacttctcttcttacttcagaaccaagatctgccacag 185

               
Query: 599 atga 602
           ||||
Sbjct: 184 atga 181



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 186 atcaaaccaatacatcaaatt 206
           |||||||||||||||||||||
Sbjct: 617 atcaaaccaatacatcaaatt 597
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  139 bits (70), Expect = 1e-29
 Identities = 156/184 (84%), Gaps = 3/184 (1%)
 Strand = Plus / Plus

                                                                            
Query: 422      tttcagtaaccctctcattgcttggttctgtagtgggacaaacttcagaagcagatgttg 481
                |||| ||||| ||||||||||||| ||||||| |||||  |||||||||||  ||| |||
Sbjct: 20937172 tttctgtaactctctcattgcttgattctgtactgggaataacttcagaagtggatattg 20937231

                                                                            
Query: 482      ttgggctatagcttggtctacca---cttcctctagtttccaaacgctccatcatcctcg 538
                 ||||| ||  |||| |||||||   || ||||||||||||| ||||||||||||||| |
Sbjct: 20937232 ctgggccatcacttgttctaccattactacctctagtttccagacgctccatcatccttg 20937291

                                                                            
Query: 539      atacagatgcaattccattgttaacttctcgtctcacttcagaaccaagatcagacacag 598
                |||| ||||||||||||   |||||||||| ||| ||||||||||||||||| | |||||
Sbjct: 20937292 atacggatgcaattccagcattaacttctcttcttacttcagaaccaagatctgccacag 20937351

                    
Query: 599      atga 602
                ||||
Sbjct: 20937352 atga 20937355



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 186      atcaaaccaatacatcaaatt 206
                |||||||||||||||||||||
Sbjct: 20936561 atcaaaccaatacatcaaatt 20936581
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>gb|AY323129.1| Oryza sativa (japonica cultivar-group) putative RING-H2 zinc finger
            protein (RHF) mRNA, complete cds
          Length = 1623

 Score =  137 bits (69), Expect = 5e-29
 Identities = 167/199 (83%), Gaps = 3/199 (1%)
 Strand = Plus / Minus

                                                                        
Query: 422  tttcagtaaccctctcattgcttggttctgtagtgggacaaacttcagaagcagatgttg 481
            |||| ||||| ||||||||||||| ||||||| |||||  |||||||||||  ||| |||
Sbjct: 1237 tttctgtaactctctcattgcttgattctgtactgggaataacttcagaagtggatattg 1178

                                                                        
Query: 482  ttgggctatagcttggtctacca---cttcctctagtttccaaacgctccatcatcctcg 538
             ||||| ||  |||| |||||||   || ||||||||||||| ||||||||||||||| |
Sbjct: 1177 ctgggccatcacttgttctaccattactacctctagtttccagacgctccatcatccttg 1118

                                                                        
Query: 539  atacagatgcaattccattgttaacttctcgtctcacttcagaaccaagatcagacacag 598
            |||| || |||||||||   |||||||||| ||| ||||||||||||||||| | |||||
Sbjct: 1117 atacggacgcaattccagcattaacttctcttcttacttcagaaccaagatctgccacag 1058

                               
Query: 599  atgagctacgtgaaaaaag 617
            ||||  |||| ||||||||
Sbjct: 1057 atgaattacgcgaaaaaag 1039



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 186  atcaaaccaatacatcaaatt 206
            |||||||||||||||||||||
Sbjct: 1488 atcaaaccaatacatcaaatt 1468
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>dbj|AK068493.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013157D07, full
            insert sequence
          Length = 1689

 Score =  131 bits (66), Expect = 3e-27
 Identities = 155/184 (84%), Gaps = 3/184 (1%)
 Strand = Plus / Minus

                                                                        
Query: 422  tttcagtaaccctctcattgcttggttctgtagtgggacaaacttcagaagcagatgttg 481
            |||| ||||| ||||||||||||| ||||||| |||||  |||||||||||  ||| |||
Sbjct: 1298 tttctgtaactctctcattgcttgattctgtactgggaataacttcagaagtggatattg 1239

                                                                        
Query: 482  ttgggctatagcttggtctacca---cttcctctagtttccaaacgctccatcatcctcg 538
             ||||| ||  |||| |||||||   || ||||||||||||| |||| |||||||||| |
Sbjct: 1238 ctgggccatcacttgttctaccattactacctctagtttccagacgccccatcatccttg 1179

                                                                        
Query: 539  atacagatgcaattccattgttaacttctcgtctcacttcagaaccaagatcagacacag 598
            |||| ||||||||||||   |||||||||| ||| ||||||||||||||||| | |||||
Sbjct: 1178 atacggatgcaattccagcattaacttctcttcttacttcagaaccaagatctgccacag 1119

                
Query: 599  atga 602
            ||||
Sbjct: 1118 atga 1115



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 186  atcaaaccaatacatcaaatt 206
            |||||||||||||||||||||
Sbjct: 1551 atcaaaccaatacatcaaatt 1531
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>gb|BT018556.1| Zea mays clone EL01N0439F08.d mRNA sequence
          Length = 1703

 Score =  121 bits (61), Expect = 3e-24
 Identities = 166/201 (82%)
 Strand = Plus / Minus

                                                                        
Query: 414  agagttactttcagtaaccctctcattgcttggttctgtagtgggacaaacttcagaagc 473
            |||||| || || |||||||| |||||||||| ||||||||  ||   ||||||||||| 
Sbjct: 1214 agagttgctctctgtaaccctttcattgcttgattctgtagcagggggaacttcagaagt 1155

                                                                        
Query: 474  agatgttgttgggctatagcttggtctaccacttcctctagtttccaaacgctccatcat 533
             |||| ||  |||||||  |||| ||| | | ||||||||||||||| ||||||||||||
Sbjct: 1154 ggatgctgccgggctatcacttgttctgctatttcctctagtttccagacgctccatcat 1095

                                                                        
Query: 534  cctcgatacagatgcaattccattgttaacttctcgtctcacttcagaaccaagatcaga 593
            ||  ||||| || |||||||||   |||||||||| ||||||||||||||||||||| | 
Sbjct: 1094 ccgtgatacggacgcaattccagcattaacttctcttctcacttcagaaccaagatccgc 1035

                                 
Query: 594  cacagatgagctacgtgaaaa 614
            ||| |||||  ||||||||||
Sbjct: 1034 cacggatgaattacgtgaaaa 1014
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>emb|AL445675.9| Human DNA sequence from clone RP11-498M14 on chromosome 1 Contains a
             CpG island, complete sequence
          Length = 171985

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 358   ccagacatggtcacacaagggg 379
             ||||||||||||||||||||||
Sbjct: 92565 ccagacatggtcacacaagggg 92544
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>gb|AY842547.1| Sus scrofa isolate KNP69 sex determining region Y (SRY) gene,
           complete cds
          Length = 721

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 498 tctaccacttcctctagtttc 518
           |||||||||||||||||||||
Sbjct: 175 tctaccacttcctctagtttc 155
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>gb|AY842546.1| Sus scrofa isolate KNP49 sex determining region Y (SRY) gene,
           complete cds
          Length = 721

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 498 tctaccacttcctctagtttc 518
           |||||||||||||||||||||
Sbjct: 175 tctaccacttcctctagtttc 155
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>gb|AY842545.1| Sus scrofa isolate KNP48 sex determining region Y (SRY) gene,
           complete cds
          Length = 721

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 498 tctaccacttcctctagtttc 518
           |||||||||||||||||||||
Sbjct: 175 tctaccacttcctctagtttc 155
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>gb|AY842544.1| Sus scrofa coreanus isolate KS37 sex determining region Y (SRY)
           gene, complete cds
          Length = 721

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 498 tctaccacttcctctagtttc 518
           |||||||||||||||||||||
Sbjct: 175 tctaccacttcctctagtttc 155
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>gb|AY842543.1| Sus scrofa coreanus isolate KS34 sex determining region Y (SRY)
           gene, complete cds
          Length = 721

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 498 tctaccacttcctctagtttc 518
           |||||||||||||||||||||
Sbjct: 175 tctaccacttcctctagtttc 155
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>gb|AY842542.1| Sus scrofa coreanus isolate KWB6 sex determining region Y (SRY)
           gene, complete cds
          Length = 721

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 498 tctaccacttcctctagtttc 518
           |||||||||||||||||||||
Sbjct: 175 tctaccacttcctctagtttc 155
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>gb|AY842541.1| Sus scrofa coreanus isolate KWB3 sex determining region Y (SRY)
           gene, complete cds
          Length = 721

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 498 tctaccacttcctctagtttc 518
           |||||||||||||||||||||
Sbjct: 175 tctaccacttcctctagtttc 155
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>gb|AY842540.1| Sus scrofa isolate JNP15 sex determining region Y (SRY) gene,
           complete cds
          Length = 721

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 498 tctaccacttcctctagtttc 518
           |||||||||||||||||||||
Sbjct: 175 tctaccacttcctctagtttc 155
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>gb|AY842539.1| Sus scrofa isolate JNP10 sex determining region Y (SRY) gene,
           complete cds
          Length = 721

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 498 tctaccacttcctctagtttc 518
           |||||||||||||||||||||
Sbjct: 175 tctaccacttcctctagtttc 155
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>gb|AY842538.1| Sus scrofa isolate JNP6 sex determining region Y (SRY) gene,
           complete cds
          Length = 721

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 498 tctaccacttcctctagtttc 518
           |||||||||||||||||||||
Sbjct: 175 tctaccacttcctctagtttc 155
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>gb|AY842537.1| Sus scrofa isolate JNP3 sex determining region Y (SRY) gene,
           complete cds
          Length = 721

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 498 tctaccacttcctctagtttc 518
           |||||||||||||||||||||
Sbjct: 175 tctaccacttcctctagtttc 155
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>gb|AY842536.1| Sus scrofa isolate JNP1 sex determining region Y (SRY) gene,
           complete cds
          Length = 721

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 498 tctaccacttcctctagtttc 518
           |||||||||||||||||||||
Sbjct: 175 tctaccacttcctctagtttc 155
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>gb|AY842535.1| Sus scrofa isolate CP2S sex determining region Y (SRY) gene,
           complete cds
          Length = 721

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 498 tctaccacttcctctagtttc 518
           |||||||||||||||||||||
Sbjct: 175 tctaccacttcctctagtttc 155
to top
>gb|AY842534.1| Sus scrofa isolate CN1S sex determining region Y (SRY) gene,
           complete cds
          Length = 721

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 498 tctaccacttcctctagtttc 518
           |||||||||||||||||||||
Sbjct: 175 tctaccacttcctctagtttc 155
to top
>gb|AY842533.1| Sus scrofa isolate CW5S sex determining region Y (SRY) gene,
           complete cds
          Length = 721

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 498 tctaccacttcctctagtttc 518
           |||||||||||||||||||||
Sbjct: 175 tctaccacttcctctagtttc 155
to top
>gb|AY842532.1| Sus scrofa isolate CJ1S sex determining region Y (SRY) gene,
           complete cds
          Length = 721

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 498 tctaccacttcctctagtttc 518
           |||||||||||||||||||||
Sbjct: 175 tctaccacttcctctagtttc 155
to top
>gb|AY842531.1| Sus scrofa isolate Y0330 sex determining region Y (SRY) gene,
           complete cds
          Length = 721

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 498 tctaccacttcctctagtttc 518
           |||||||||||||||||||||
Sbjct: 175 tctaccacttcctctagtttc 155
to top
>gb|AY842530.1| Sus scrofa isolate L0333 sex determining region Y (SRY) gene,
           complete cds
          Length = 721

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 498 tctaccacttcctctagtttc 518
           |||||||||||||||||||||
Sbjct: 175 tctaccacttcctctagtttc 155
to top
>gb|AY842529.1| Sus scrofa isolate H69-3 sex determining region Y (SRY) gene,
           complete cds
          Length = 721

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 498 tctaccacttcctctagtttc 518
           |||||||||||||||||||||
Sbjct: 175 tctaccacttcctctagtttc 155
to top
>gb|AY842528.1| Sus scrofa isolate D03154 sex determining region Y (SRY) gene,
           complete cds
          Length = 721

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 498 tctaccacttcctctagtttc 518
           |||||||||||||||||||||
Sbjct: 175 tctaccacttcctctagtttc 155
to top
>gb|AY842527.1| Sus scrofa isolate B0453 sex determining region Y (SRY) gene,
           complete cds
          Length = 721

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 498 tctaccacttcctctagtttc 518
           |||||||||||||||||||||
Sbjct: 175 tctaccacttcctctagtttc 155
to top
>gb|AC099884.12| Mus musculus chromosome 15, clone RP23-11F24, complete sequence
          Length = 265797

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 4     tgcaacagcatcaaaccctta 24
             |||||||||||||||||||||
Sbjct: 37629 tgcaacagcatcaaaccctta 37609
to top
>emb|CT025402.2| Xenopus tropicalis finished cDNA, clone TGas023b12
          Length = 3483

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 548 caattccattgttaacttctc 568
           |||||||||||||||||||||
Sbjct: 610 caattccattgttaacttctc 590
to top
>gb|AC126550.3| Mus musculus BAC clone RP24-405L5 from chromosome 17, complete sequence
          Length = 171820

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 300   gatgaagaatgagcacatgca 320
             |||||||||||||||||||||
Sbjct: 91691 gatgaagaatgagcacatgca 91711
to top
>gb|AC025456.7| Homo sapiens chromosome 5 clone CTD-2197O4, complete sequence
          Length = 139086

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 458   gacaaacttcagaagcagatg 478
             |||||||||||||||||||||
Sbjct: 62014 gacaaacttcagaagcagatg 62034
to top
>gb|AC150799.4| Medicago truncatula chromosome 2 BAC clone mth2-47j13, complete sequence
          Length = 119159

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                   
Query: 559    ttaacttctcgtctcacttcagaaccaagatcagaca 595
              |||||||||||  | |||||||| |||||||||||||
Sbjct: 104964 ttaacttctcgcttaacttcagatccaagatcagaca 104928
to top
>gb|U49860.1|SSU49860 Sus scrofa SRY protein (SRY) gene, complete cds
          Length = 1771

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 498 tctaccacttcctctagtttc 518
           |||||||||||||||||||||
Sbjct: 780 tctaccacttcctctagtttc 760
to top
>gb|AC026437.5|AC026437 Homo sapiens chromosome 5 clone CTD-2251O21, complete sequence
          Length = 91770

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 458   gacaaacttcagaagcagatg 478
             |||||||||||||||||||||
Sbjct: 91718 gacaaacttcagaagcagatg 91738
to top
>ref|NM_214452.1| Sus scrofa sex determining region Y (SRY), mRNA
          Length = 627

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 498 tctaccacttcctctagtttc 518
           |||||||||||||||||||||
Sbjct: 165 tctaccacttcctctagtttc 145
to top
>emb|BX004850.11| Zebrafish DNA sequence from clone CH211-51M24 in linkage group 19,
             complete sequence
          Length = 121375

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 392   tagtactcgtaatagtagtagtaga 416
             ||||| |||||||||||||||||||
Sbjct: 53735 tagtagtcgtaatagtagtagtaga 53711



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 392   tagtactcgtaatagtagtagtaga 416
             ||||| |||||||||||||||||||
Sbjct: 53474 tagtagtcgtaatagtagtagtaga 53450



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 392   tagtactcgtaatagtagtagtaga 416
             ||||| |||||||||||||||||||
Sbjct: 53431 tagtagtcgtaatagtagtagtaga 53407



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 393   agtactcgtaatagtagtagtaga 416
             |||| |||||||||||||||||||
Sbjct: 53519 agtagtcgtaatagtagtagtaga 53496



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 392   tagtactcgtaatagtagtagtag 415
             ||||| ||||||||||||||||||
Sbjct: 53290 tagtagtcgtaatagtagtagtag 53267
to top
>emb|AL935202.7| Zebrafish DNA sequence from clone CH211-197E11, complete sequence
          Length = 189096

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 392    tagtactcgtaatagtagtagtaga 416
              ||||| |||||||||||||||||||
Sbjct: 122075 tagtaatcgtaatagtagtagtaga 122051
to top
>emb|AL935279.5| Zebrafish DNA sequence from clone CH211-195M9 in linkage group 24,
             complete sequence
          Length = 193366

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 114   tttttaattacagagatgaaa 134
             |||||||||||||||||||||
Sbjct: 15673 tttttaattacagagatgaaa 15653
to top
>gb|AC119980.7| Mus musculus chromosome 8, clone RP24-495J19, complete sequence
          Length = 145150

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 301   atgaagaatgagcacatgca 320
             ||||||||||||||||||||
Sbjct: 63332 atgaagaatgagcacatgca 63313
to top
>ref|XM_460737.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0F09515g)
           partial mRNA
          Length = 2232

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 241 agttgagatggcatcatgtc 260
           ||||||||||||||||||||
Sbjct: 506 agttgagatggcatcatgtc 487
to top
>gb|AC117662.13| Mus musculus chromosome 16, clone RP23-351D19, complete sequence
          Length = 293822

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 276    atgccacctgcccatacctt 295
              ||||||||||||||||||||
Sbjct: 223815 atgccacctgcccatacctt 223796
to top
>gb|AC002487.1| Homo sapiens BAC clone CTA-369K23 from 7, complete sequence
          Length = 181588

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 253   atcatgtcgttggagtttcagcta 276
             ||||||| ||||||||||||||||
Sbjct: 65100 atcatgtggttggagtttcagcta 65077
to top
>ref|XM_961186.1| Plasmodium falciparum 3D7 hypothetical protein (PFF1440w) partial
            mRNA
          Length = 20286

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 391  ctagtactcgtaatagtagtagta 414
            |||||||| |||||||||||||||
Sbjct: 2753 ctagtactagtaatagtagtagta 2776
to top
>ref|XM_500780.1| Yarrowia lipolytica CLIB122, YALI0B11924g predicted mRNA
          Length = 2418

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 582  accaagatcagacacagatg 601
            ||||||||||||||||||||
Sbjct: 2368 accaagatcagacacagatg 2387
to top
>emb|AL365184.12| Human DNA sequence from clone RP11-80B9 on chromosome 1 Contains two
             novel genes, a protein-kinase interferon-inducible double
             stranded RNA dependent inhibitor repressor of (P58
             repressor) (PRKRIR) pseudogene, a riboflavin kinase (RFK)
             pseudogene and the 3' end of the RGS7 gene for regulator
             of G-protein signalling 7, complete sequence
          Length = 173634

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 225   aggtgatttatgcaacagtt 244
             ||||||||||||||||||||
Sbjct: 73301 aggtgatttatgcaacagtt 73320
to top
>emb|AL138822.13| Human DNA sequence from clone RP11-57H24 on chromosome 13 Contains a
             Eukaryotic initiation factor 4A (eIF4a) pseudogene,
             complete sequence
          Length = 126502

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 460   caaacttcagaagcagatgt 479
             ||||||||||||||||||||
Sbjct: 16206 caaacttcagaagcagatgt 16187
to top
>ref|XM_776814.1| PREDICTED: Strongylocentrotus purpuratus similar to zn-finger, CCHC
            type and RNA-directed DNA polymerase  and Integrase,
            catalytic domain containing protein (3J949) (LOC576514),
            mRNA
          Length = 5013

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 530  tcatcctcgatacagatgca 549
            ||||||||||||||||||||
Sbjct: 2525 tcatcctcgatacagatgca 2544
to top
>emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces
              hansenii
          Length = 2336804

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 241    agttgagatggcatcatgtc 260
              ||||||||||||||||||||
Sbjct: 759557 agttgagatggcatcatgtc 759538
to top
>emb|CR382401.1| Plasmodium falciparum chromosome 6, complete sequence; segment 4/5
          Length = 337203

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 391    ctagtactcgtaatagtagtagta 414
              |||||||| |||||||||||||||
Sbjct: 179219 ctagtactagtaatagtagtagta 179242
to top
>emb|AL929351.1|PFA929351 Plasmodium falciparum strain 3D7, chromosome 5, segment 1/4
          Length = 347050

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 392    tagtactcgtaatagtagtagtag 415
              ||||| ||||||||||||||||||
Sbjct: 308603 tagtagtcgtaatagtagtagtag 308580
to top
>emb|AJ002594.1|PFRNASUB1 Plasmodium falciparum mRNA for subtilisin-like protease
          Length = 2275

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 392  tagtactcgtaatagtagtagtag 415
            ||||| ||||||||||||||||||
Sbjct: 1081 tagtagtcgtaatagtagtagtag 1104
to top
>emb|AJ002233.1|PFJ002233 Plasmodium falciparum genomic gene for subtilisin-like protease
          Length = 3183

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 392  tagtactcgtaatagtagtagtag 415
            ||||| ||||||||||||||||||
Sbjct: 1349 tagtagtcgtaatagtagtagtag 1372
to top
>gb|AC024257.25| Homo sapiens 12 BAC RP11-370I10 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 184125

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 60    tatggaaattaccacatcca 79
             ||||||||||||||||||||
Sbjct: 91411 tatggaaattaccacatcca 91430
to top
>gb|AC069353.9| Homo sapiens chromosome 8, clone RP11-37B2, complete sequence
          Length = 170181

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 105    tctgaaggatttttaattacagag 128
              |||| |||||||||||||||||||
Sbjct: 150218 tctggaggatttttaattacagag 150195
to top
>emb|BX927196.10| Zebrafish DNA sequence from clone DKEY-121D19 in linkage group 17,
            complete sequence
          Length = 84911

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 392  tagtactcgtaatagtagtagtag 415
            ||||||| ||||||||||||||||
Sbjct: 3072 tagtactagtaatagtagtagtag 3049
to top
>gb|AC159188.2| Mus musculus BAC clone RP24-247J24 from chromosome 13, complete sequence
          Length = 197018

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 117    ttaattacagagatgaaacaggag 140
              |||||||||||| |||||||||||
Sbjct: 124185 ttaattacagagctgaaacaggag 124162
to top
>emb|BX572647.10| Zebrafish DNA sequence from clone CH211-149N1 in linkage group 10,
              complete sequence
          Length = 190639

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 392    tagtactcgtaatagtagtagtag 415
              ||||| ||||||||||||||||||
Sbjct: 175868 tagtagtcgtaatagtagtagtag 175891
to top
>gb|AC099816.2| Homo sapiens, clone RP11-18K20, complete sequence
          Length = 151460

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 105   tctgaaggatttttaattacagag 128
             |||| |||||||||||||||||||
Sbjct: 85789 tctggaggatttttaattacagag 85812
to top
>gb|AC107326.4| Drosophila melanogaster X BAC RP98-33A8 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 177096

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 541   acagatgcaattccattgtt 560
             ||||||||||||||||||||
Sbjct: 75269 acagatgcaattccattgtt 75288
to top
>gb|AC174221.4| Mus musculus BAC clone RP24-237K1 from chromosome y, complete sequence
          Length = 171789

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 262    ttggagtttcagctatgcca 281
              ||||||||||||||||||||
Sbjct: 159860 ttggagtttcagctatgcca 159841
to top
>gb|AC154285.2| Mus musculus BAC clone RP23-452P8 from chromosome 16, complete sequence
          Length = 183796

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 314    acatgcaggccttcttcaga 333
              ||||||||||||||||||||
Sbjct: 114693 acatgcaggccttcttcaga 114712
to top
>gb|AC145578.5| Mus musculus BAC clone RP24-108H11 from chromosome y, complete sequence
          Length = 148610

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 262    ttggagtttcagctatgcca 281
              ||||||||||||||||||||
Sbjct: 112307 ttggagtttcagctatgcca 112326
to top
>gb|AC007978.15|AC007978 Mus musculus  BAC MGS3-335O7 (Genome Systems Mouse BAC Library) complete
              sequence
          Length = 183936

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 262    ttggagtttcagctatgcca 281
              ||||||||||||||||||||
Sbjct: 129703 ttggagtttcagctatgcca 129684
to top
>gb|AC133477.2| Homo sapiens 3 BAC RP11-364M20 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 101061

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 108   gaaggatttttaattacaga 127
             ||||||||||||||||||||
Sbjct: 35021 gaaggatttttaattacaga 35002
to top
>gb|AC154232.1| Mus musculus BAC clone RP24-340J3 from chromosome 16, complete
            sequence
          Length = 141529

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 276  atgccacctgcccatacctt 295
            ||||||||||||||||||||
Sbjct: 2762 atgccacctgcccatacctt 2743
to top
>emb|BX649445.5| Zebrafish DNA sequence from clone DKEY-177H9 in linkage group 7, complete
              sequence
          Length = 159167

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 392    tagtactcgtaatagtagtagtag 415
              ||||||| ||||||||||||||||
Sbjct: 130982 tagtactagtaatagtagtagtag 130959
to top
>emb|AL845419.18| Zebrafish DNA sequence from clone CH211-198O19 in linkage group 16,
              complete sequence
          Length = 176379

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 392    tagtactcgtaatagtagtagtag 415
              ||||| ||||||||||||||||||
Sbjct: 175620 tagtagtcgtaatagtagtagtag 175643
to top
>emb|CR848045.10| Zebrafish DNA sequence from clone DKEY-8K3 in linkage group 16,
             complete sequence
          Length = 104737

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 80    atatttatacaagtaaacac 99
             ||||||||||||||||||||
Sbjct: 54754 atatttatacaagtaaacac 54735
to top
>gb|AE003421.2| Drosophila melanogaster chromosome X, section 5 of 74 of the complete
              sequence
          Length = 304204

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 541    acagatgcaattccattgtt 560
              ||||||||||||||||||||
Sbjct: 137579 acagatgcaattccattgtt 137598
to top
>emb|CT030705.12| Mouse DNA sequence from clone RP23-118N11 on chromosome 13, complete
              sequence
          Length = 125516

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 117    ttaattacagagatgaaacaggag 140
              |||||||||||| |||||||||||
Sbjct: 100230 ttaattacagagctgaaacaggag 100253
to top
>gb|CP000102.1| Methanosphaera stadtmanae DSM 3091, complete genome
          Length = 1767403

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 546     tgcaattccattgttaactt 565
               ||||||||||||||||||||
Sbjct: 1264229 tgcaattccattgttaactt 1264210
to top
>emb|AL935147.9| Mouse DNA sequence from clone RP23-33O19 on chromosome 2, complete
             sequence
          Length = 241249

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 351   atttgaaccagacatggtcacaca 374
             |||||||||||||||||| |||||
Sbjct: 31312 atttgaaccagacatggtgacaca 31335
to top
>emb|AL929307.8| Zebrafish DNA sequence from clone CH211-85A24 in linkage group 20,
              complete sequence
          Length = 176518

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 392    tagtactcgtaatagtagtagtag 415
              ||||||| ||||||||||||||||
Sbjct: 146857 tagtactagtaatagtagtagtag 146834
to top
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica
          Length = 3066374

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 582     accaagatcagacacagatg 601
               ||||||||||||||||||||
Sbjct: 1599235 accaagatcagacacagatg 1599254
to top
>emb|AL928881.4| Zebrafish DNA sequence from clone CH211-180J19, complete sequence
          Length = 150077

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 113    atttttaattacagagatgaaaca 136
              ||||||||||||| ||||||||||
Sbjct: 104957 atttttaattacacagatgaaaca 104980
to top
>emb|AL009189.1|DMC25D2 Drosophila melanogaster cosmid clone 25D2
          Length = 21509

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 541  acagatgcaattccattgtt 560
            ||||||||||||||||||||
Sbjct: 4667 acagatgcaattccattgtt 4686


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,732,900
Number of Sequences: 3902068
Number of extensions: 5732900
Number of successful extensions: 113935
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 113629
Number of HSP's gapped (non-prelim): 300
length of query: 620
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 597
effective length of database: 17,143,297,704
effective search space: 10234548729288
effective search space used: 10234548729288
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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