ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd26g15 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1023 bits (516), Expect = 0.0 Identities = 591/617 (95%), Gaps = 4/617 (0%) Strand = Plus / Plus Query: 1 aaaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| Sbjct: 78151 aaaagaagatctagaatatatccag-atgtgtgtgtatatttatctaaattctatattta 78209 Query: 61 tagataataatgtagtccttctaaaaaatatccttatttttactcttattgaatcgcggt 120 |||||||| ||| ||||||| ||||| ||||||||||| ||||||||||||||||||| Sbjct: 78210 tagataat---gtaatccttcttaaaaaaatccttattttgactcttattgaatcgcggt 78266 Query: 121 aaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttattt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78267 aaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttattt 78326 Query: 181 gttaatttataaacttaccaaataagacaannnnnnnggtttgttccgccatcccaccca 240 |||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 78327 gttaatttataaacttaccaaataagacaatttttttggtttgttccgccatcccaccca 78386 Query: 241 atgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78387 atgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccca 78446 Query: 301 ctgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttcttt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78447 ctgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttcttt 78506 Query: 361 ccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaatttg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 78507 ccgagttaattttctcagttttattaacccgggcggctctttattattgctttaaatttg 78566 Query: 421 tagttcttctttcaagttacaatttttcattctctattagttttattatattgatgcttt 480 |||||||| |||||||||| ||||||| ||||||||||| |||||||||||||||||||| Sbjct: 78567 tagttcttgtttcaagttaaaatttttaattctctattatttttattatattgatgcttt 78626 Query: 481 ttcacattgccttttatgatgtaattcatagaccatacacagnggaattctatatcttat 540 |||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||| Sbjct: 78627 atcacattgccttttatgatgtaattcatagaccatacatagtggaatcctatatcttat 78686 Query: 541 ttatttcctcttccttctttctatcatccctccctttatccacatccctttagttttgct 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78687 ttatttcctcttccttctttctatcatccctccctttatccacatccctttagttttgct 78746 Query: 601 tcacaacctanaatccc 617 |||||||||| |||||| Sbjct: 78747 tcacaacctagaatccc 78763
>gb|DQ113928.1| Calamagrostis muiriana isolate B1 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 837 bits (422), Expect = 0.0 Identities = 567/615 (92%), Gaps = 5/615 (0%) Strand = Plus / Plus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattt-a 60 ||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| | Sbjct: 26 aaagaagatctagaatatatctag-atgtgtgtgtctatttatctaaattctatatttta 84 Query: 61 tagataataatgtagtccttctaaaaaatatccttatttttactcttattgaatcgcggt 120 ||||| || ||| ||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 85 tagatgat---gtaatccttaaaaaaaatatccttatttttactcttattgaataatggt 141 Query: 121 aaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttattt 180 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 142 aaagtattctaattcaaaaagtatttcgcgggcgaatatttactctttcctgtcttattt 201 Query: 181 gttaatttataaacttaccaaataagacaannnnnnnggtttgttccgccatcccaccca 240 |||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 202 gttaatttataaccttaccaaataagacaatttttttggtttgttccgccatcccaccca 261 Query: 241 atgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccca 300 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 262 atgaagtattaggattcttttcaataaaatcctatggaatcataggttctgtcgttccca 321 Query: 301 ctgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttcttt 360 |||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||| Sbjct: 322 ctgcttctccttgaatggttaggtctgaattccacaatggagcttccaaaaaatttcttt 381 Query: 361 ccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaatttg 420 ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| Sbjct: 382 ccgagttaattttctcagttttattaaccagggcggctctttattattgctttaaatttc 441 Query: 421 tagttcttctttcaagttacaatttttcattctctattagttttattatattgatgcttt 480 |||||||| ||||||||||| |||| | ||||||||||| |||||||||||||||||||| Sbjct: 442 tagttcttgtttcaagttacgatttctaattctctattatttttattatattgatgcttt 501 Query: 481 ttcacattgccttttatgatgtaattcatagaccatacacagnggaattctatatcttat 540 ||||||||| |||||||||| ||||||||||||||||| | ||||| |||||||||| Sbjct: 502 atcacattgctttttatgatgcaattcatagaccatacatattggaatcctatatcttac 561 Query: 541 ttatttcctcttccttctttctatcatccctccctttatccacatccctttagttttgct 600 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 562 ttaattcctcttccttctttctatcatccctccctttatccacatccctttagttttcct 621 Query: 601 tcacaacctanaatc 615 |||||||||| |||| Sbjct: 622 tcacaacctagaatc 636
>gb|DQ113934.1| Calamagrostis breweri isolate X17 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 821 bits (414), Expect = 0.0 Identities = 565/615 (91%), Gaps = 5/615 (0%) Strand = Plus / Plus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattt-a 60 ||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| | Sbjct: 26 aaagaagatctagaatatatctag-atgtgtgtgtctatttatctaaattctatatttta 84 Query: 61 tagataataatgtagtccttctaaaaaatatccttatttttactcttattgaatcgcggt 120 | ||| || ||| ||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 85 tggatgat---gtaatccttaaaaaaaatatccttatttttactcttattgaataatggt 141 Query: 121 aaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttattt 180 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 142 aaagtattctaattcaaaaagtatttcgcgggcgaatatttactctttcctgtcttattt 201 Query: 181 gttaatttataaacttaccaaataagacaannnnnnnggtttgttccgccatcccaccca 240 |||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 202 gttaatttataaccttaccaaataagacaatttttttggtttgttccgccatcccaccca 261 Query: 241 atgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccca 300 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 262 atgaagtattaggattcttttcaataaaatcctatggaatcataggttctgtcgttccca 321 Query: 301 ctgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttcttt 360 |||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||| Sbjct: 322 ctgcttctccttgaatggttaggtctgaattccacaatggagcttccaaaaaatttcttt 381 Query: 361 ccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaatttg 420 ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| Sbjct: 382 ccgagttaattttctcagttttattaaccagggcggctctttattattgctttaaatttc 441 Query: 421 tagttcttctttcaagttacaatttttcattctctattagttttattatattgatgcttt 480 |||||||| |||||||||| |||| | ||||||||||| |||||||||||||||||||| Sbjct: 442 tagttcttgtttcaagttatgatttctaattctctattatttttattatattgatgcttt 501 Query: 481 ttcacattgccttttatgatgtaattcatagaccatacacagnggaattctatatcttat 540 ||||||||| |||||||||| ||||||||||||||||| | ||||| |||||||||| Sbjct: 502 atcacattgctttttatgatgcaattcatagaccatacatattggaatcctatatcttac 561 Query: 541 ttatttcctcttccttctttctatcatccctccctttatccacatccctttagttttgct 600 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 562 ttaattcctcttccttctttctatcatccctccctttatccacatccctttagttttcct 621 Query: 601 tcacaacctanaatc 615 |||||||||| |||| Sbjct: 622 tcacaacctagaatc 636
>gb|DQ113933.1| Calamagrostis breweri isolate RMP0198 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 821 bits (414), Expect = 0.0 Identities = 565/615 (91%), Gaps = 5/615 (0%) Strand = Plus / Plus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattt-a 60 ||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| | Sbjct: 26 aaagaagatctagaatatatctag-atgtgtgtgtctatttatctaaattctatatttta 84 Query: 61 tagataataatgtagtccttctaaaaaatatccttatttttactcttattgaatcgcggt 120 | ||| || ||| ||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 85 tggatgat---gtaatccttaaaaaaaatatccttatttttactcttattgaataatggt 141 Query: 121 aaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttattt 180 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 142 aaagtattctaattcaaaaagtatttcgcgggcgaatatttactctttcctgtcttattt 201 Query: 181 gttaatttataaacttaccaaataagacaannnnnnnggtttgttccgccatcccaccca 240 |||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 202 gttaatttataaccttaccaaataagacaatttttttggtttgttccgccatcccaccca 261 Query: 241 atgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccca 300 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 262 atgaagtattaggattcttttcaataaaatcctatggaatcataggttctgtcgttccca 321 Query: 301 ctgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttcttt 360 |||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||| Sbjct: 322 ctgcttctccttgaatggttaggtctgaattccacaatggagcttccaaaaaatttcttt 381 Query: 361 ccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaatttg 420 ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| Sbjct: 382 ccgagttaattttctcagttttattaaccagggcggctctttattattgctttaaatttc 441 Query: 421 tagttcttctttcaagttacaatttttcattctctattagttttattatattgatgcttt 480 |||||||| |||||||||| |||| | ||||||||||| |||||||||||||||||||| Sbjct: 442 tagttcttgtttcaagttatgatttctaattctctattatttttattatattgatgcttt 501 Query: 481 ttcacattgccttttatgatgtaattcatagaccatacacagnggaattctatatcttat 540 ||||||||| |||||||||| ||||||||||||||||| | ||||| |||||||||| Sbjct: 502 atcacattgctttttatgatgcaattcatagaccatacatattggaatcctatatcttac 561 Query: 541 ttatttcctcttccttctttctatcatccctccctttatccacatccctttagttttgct 600 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 562 ttaattcctcttccttctttctatcatccctccctttatccacatccctttagttttcct 621 Query: 601 tcacaacctanaatc 615 |||||||||| |||| Sbjct: 622 tcacaacctagaatc 636
>gb|DQ113932.1| Calamagrostis breweri isolate BW8259 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 821 bits (414), Expect = 0.0 Identities = 565/615 (91%), Gaps = 5/615 (0%) Strand = Plus / Plus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattt-a 60 ||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| | Sbjct: 26 aaagaagatctagaatatatctag-atgtgtgtgtctatttatctaaattctatatttta 84 Query: 61 tagataataatgtagtccttctaaaaaatatccttatttttactcttattgaatcgcggt 120 | ||| || ||| ||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 85 tggatgat---gtaatccttaaaaaaaatatccttatttttactcttattgaataatggt 141 Query: 121 aaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttattt 180 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 142 aaagtattctaattcaaaaagtatttcgcgggcgaatatttactctttcctgtcttattt 201 Query: 181 gttaatttataaacttaccaaataagacaannnnnnnggtttgttccgccatcccaccca 240 |||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 202 gttaatttataaccttaccaaataagacaatttttttggtttgttccgccatcccaccca 261 Query: 241 atgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccca 300 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 262 atgaagtattaggattcttttcaataaaatcctatggaatcataggttctgtcgttccca 321 Query: 301 ctgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttcttt 360 |||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||| Sbjct: 322 ctgcttctccttgaatggttaggtctgaattccacaatggagcttccaaaaaatttcttt 381 Query: 361 ccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaatttg 420 ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| Sbjct: 382 ccgagttaattttctcagttttattaaccagggcggctctttattattgctttaaatttc 441 Query: 421 tagttcttctttcaagttacaatttttcattctctattagttttattatattgatgcttt 480 |||||||| |||||||||| |||| | ||||||||||| |||||||||||||||||||| Sbjct: 442 tagttcttgtttcaagttatgatttctaattctctattatttttattatattgatgcttt 501 Query: 481 ttcacattgccttttatgatgtaattcatagaccatacacagnggaattctatatcttat 540 ||||||||| |||||||||| ||||||||||||||||| | ||||| |||||||||| Sbjct: 502 atcacattgctttttatgatgcaattcatagaccatacatattggaatcctatatcttac 561 Query: 541 ttatttcctcttccttctttctatcatccctccctttatccacatccctttagttttgct 600 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 562 ttaattcctcttccttctttctatcatccctccctttatccacatccctttagttttcct 621 Query: 601 tcacaacctanaatc 615 |||||||||| |||| Sbjct: 622 tcacaacctagaatc 636
>gb|DQ113931.1| Calamagrostis breweri isolate RMP0007 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 821 bits (414), Expect = 0.0 Identities = 565/615 (91%), Gaps = 5/615 (0%) Strand = Plus / Plus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattt-a 60 ||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| | Sbjct: 26 aaagaagatctagaatatatctag-atgtgtgtgtctatttatctaaattctatatttta 84 Query: 61 tagataataatgtagtccttctaaaaaatatccttatttttactcttattgaatcgcggt 120 | ||| || ||| ||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 85 tggatgat---gtaatccttaaaaaaaatatccttatttttactcttattgaataatggt 141 Query: 121 aaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttattt 180 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 142 aaagtattctaattcaaaaagtatttcgcgggcgaatatttactctttcctgtcttattt 201 Query: 181 gttaatttataaacttaccaaataagacaannnnnnnggtttgttccgccatcccaccca 240 |||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 202 gttaatttataaccttaccaaataagacaatttttttggtttgttccgccatcccaccca 261 Query: 241 atgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccca 300 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 262 atgaagtattaggattcttttcaataaaatcctatggaatcataggttctgtcgttccca 321 Query: 301 ctgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttcttt 360 |||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||| Sbjct: 322 ctgcttctccttgaatggttaggtctgaattccacaatggagcttccaaaaaatttcttt 381 Query: 361 ccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaatttg 420 ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| Sbjct: 382 ccgagttaattttctcagttttattaaccagggcggctctttattattgctttaaatttc 441 Query: 421 tagttcttctttcaagttacaatttttcattctctattagttttattatattgatgcttt 480 |||||||| |||||||||| |||| | ||||||||||| |||||||||||||||||||| Sbjct: 442 tagttcttgtttcaagttatgatttctaattctctattatttttattatattgatgcttt 501 Query: 481 ttcacattgccttttatgatgtaattcatagaccatacacagnggaattctatatcttat 540 ||||||||| |||||||||| ||||||||||||||||| | ||||| |||||||||| Sbjct: 502 atcacattgctttttatgatgcaattcatagaccatacatattggaatcctatatcttac 561 Query: 541 ttatttcctcttccttctttctatcatccctccctttatccacatccctttagttttgct 600 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 562 ttaattcctcttccttctttctatcatccctccctttatccacatccctttagttttcct 621 Query: 601 tcacaacctanaatc 615 |||||||||| |||| Sbjct: 622 tcacaacctagaatc 636
>gb|DQ113930.1| Calamagrostis muiriana isolate B4 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 821 bits (414), Expect = 0.0 Identities = 565/615 (91%), Gaps = 5/615 (0%) Strand = Plus / Plus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattt-a 60 ||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| | Sbjct: 26 aaagaagatctagaatatatctag-atgtgtgtgtctatttatctaaattctatatttta 84 Query: 61 tagataataatgtagtccttctaaaaaatatccttatttttactcttattgaatcgcggt 120 | ||| || ||| ||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 85 tggatgat---gtaatccttaaaaaaaatatccttatttttactcttattgaataatggt 141 Query: 121 aaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttattt 180 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 142 aaagtattctaattcaaaaagtatttcgcgggcgaatatttactctttcctgtcttattt 201 Query: 181 gttaatttataaacttaccaaataagacaannnnnnnggtttgttccgccatcccaccca 240 |||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 202 gttaatttataaccttaccaaataagacaatttttttggtttgttccgccatcccaccca 261 Query: 241 atgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccca 300 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 262 atgaagtattaggattcttttcaataaaatcctatggaatcataggttctgtcgttccca 321 Query: 301 ctgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttcttt 360 |||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||| Sbjct: 322 ctgcttctccttgaatggttaggtctgaattccacaatggagcttccaaaaaatttcttt 381 Query: 361 ccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaatttg 420 ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| Sbjct: 382 ccgagttaattttctcagttttattaaccagggcggctctttattattgctttaaatttc 441 Query: 421 tagttcttctttcaagttacaatttttcattctctattagttttattatattgatgcttt 480 |||||||| |||||||||| |||| | ||||||||||| |||||||||||||||||||| Sbjct: 442 tagttcttgtttcaagttatgatttctaattctctattatttttattatattgatgcttt 501 Query: 481 ttcacattgccttttatgatgtaattcatagaccatacacagnggaattctatatcttat 540 ||||||||| |||||||||| ||||||||||||||||| | ||||| |||||||||| Sbjct: 502 atcacattgctttttatgatgcaattcatagaccatacatattggaatcctatatcttac 561 Query: 541 ttatttcctcttccttctttctatcatccctccctttatccacatccctttagttttgct 600 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 562 ttaattcctcttccttctttctatcatccctccctttatccacatccctttagttttcct 621 Query: 601 tcacaacctanaatc 615 |||||||||| |||| Sbjct: 622 tcacaacctagaatc 636
>gb|DQ113929.1| Calamagrostis muiriana isolate B3 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 821 bits (414), Expect = 0.0 Identities = 565/615 (91%), Gaps = 5/615 (0%) Strand = Plus / Plus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattt-a 60 ||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| | Sbjct: 26 aaagaagatctagaatatatctag-atgtgtgtgtctatttatctaaattctatatttta 84 Query: 61 tagataataatgtagtccttctaaaaaatatccttatttttactcttattgaatcgcggt 120 | ||| || ||| ||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 85 tggatgat---gtaatccttaaaaaaaatatccttatttttactcttattgaataatggt 141 Query: 121 aaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttattt 180 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 142 aaagtattctaattcaaaaagtatttcgcgggcgaatatttactctttcctgtcttattt 201 Query: 181 gttaatttataaacttaccaaataagacaannnnnnnggtttgttccgccatcccaccca 240 |||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 202 gttaatttataaccttaccaaataagacaatttttttggtttgttccgccatcccaccca 261 Query: 241 atgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccca 300 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 262 atgaagtattaggattcttttcaataaaatcctatggaatcataggttctgtcgttccca 321 Query: 301 ctgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttcttt 360 |||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||| Sbjct: 322 ctgcttctccttgaatggttaggtctgaattccacaatggagcttccaaaaaatttcttt 381 Query: 361 ccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaatttg 420 ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| Sbjct: 382 ccgagttaattttctcagttttattaaccagggcggctctttattattgctttaaatttc 441 Query: 421 tagttcttctttcaagttacaatttttcattctctattagttttattatattgatgcttt 480 |||||||| |||||||||| |||| | ||||||||||| |||||||||||||||||||| Sbjct: 442 tagttcttgtttcaagttatgatttctaattctctattatttttattatattgatgcttt 501 Query: 481 ttcacattgccttttatgatgtaattcatagaccatacacagnggaattctatatcttat 540 ||||||||| |||||||||| ||||||||||||||||| | ||||| |||||||||| Sbjct: 502 atcacattgctttttatgatgcaattcatagaccatacatattggaatcctatatcttac 561 Query: 541 ttatttcctcttccttctttctatcatccctccctttatccacatccctttagttttgct 600 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 562 ttaattcctcttccttctttctatcatccctccctttatccacatccctttagttttcct 621 Query: 601 tcacaacctanaatc 615 |||||||||| |||| Sbjct: 622 tcacaacctagaatc 636
>gb|DQ113927.1| Calamagrostis muiriana isolate A7 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 821 bits (414), Expect = 0.0 Identities = 565/615 (91%), Gaps = 5/615 (0%) Strand = Plus / Plus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattt-a 60 ||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| | Sbjct: 26 aaagaagatctagaatatatctag-atgtgtgtgtctatttatctaaattctatatttta 84 Query: 61 tagataataatgtagtccttctaaaaaatatccttatttttactcttattgaatcgcggt 120 | ||| || ||| ||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 85 tggatgat---gtaatccttaaaaaaaatatccttatttttactcttattgaataaaggt 141 Query: 121 aaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttattt 180 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 142 aaagtattctaattcaaaaagtatttcgcgggcgaatatttactctttcctgtcttattt 201 Query: 181 gttaatttataaacttaccaaataagacaannnnnnnggtttgttccgccatcccaccca 240 |||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 202 gttaatttataaccttaccaaataagacaatttttttggtttgttccgccatcccaccca 261 Query: 241 atgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccca 300 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 262 atgaagtattaggattcttttcaataaaatcctatggaatcataggttctgtcgttccca 321 Query: 301 ctgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttcttt 360 |||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||| Sbjct: 322 ctgcttctccttgaatggttaggtctgaattccacaatggagcttccaaaaaatttcttt 381 Query: 361 ccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaatttg 420 ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| Sbjct: 382 ccgagttaattttctcagttttattaaccagggcggctctttattattgctttaaatttc 441 Query: 421 tagttcttctttcaagttacaatttttcattctctattagttttattatattgatgcttt 480 |||||||| |||||||||| |||| | ||||||||||| |||||||||||||||||||| Sbjct: 442 tagttcttgtttcaagttatgatttctaattctctattatttttattatattgatgcttt 501 Query: 481 ttcacattgccttttatgatgtaattcatagaccatacacagnggaattctatatcttat 540 ||||||||| |||||||||| ||||||||||||||||| | ||||| |||||||||| Sbjct: 502 atcacattgctttttatgatgcaattcatagaccatacatattggaatcctatatcttac 561 Query: 541 ttatttcctcttccttctttctatcatccctccctttatccacatccctttagttttgct 600 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 562 ttaattcctcttccttctttctatcatccctccctttatccacatccctttagttttcct 621 Query: 601 tcacaacctanaatc 615 |||||||||| |||| Sbjct: 622 tcacaacctagaatc 636
>gb|DQ113926.1| Calamagrostis muiriana isolate A1 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 821 bits (414), Expect = 0.0 Identities = 565/615 (91%), Gaps = 5/615 (0%) Strand = Plus / Plus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattt-a 60 ||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| | Sbjct: 26 aaagaagatctagaatatatctag-atgtgtgtgtctatttatctaaattctatatttta 84 Query: 61 tagataataatgtagtccttctaaaaaatatccttatttttactcttattgaatcgcggt 120 | ||| || ||| ||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 85 tggatgat---gtaatccttaaaaaaaatatccttatttttactcttattgaataaaggt 141 Query: 121 aaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttattt 180 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 142 aaagtattctaattcaaaaagtatttcgcgggcgaatatttactctttcctgtcttattt 201 Query: 181 gttaatttataaacttaccaaataagacaannnnnnnggtttgttccgccatcccaccca 240 |||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 202 gttaatttataaccttaccaaataagacaatttttttggtttgttccgccatcccaccca 261 Query: 241 atgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccca 300 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 262 atgaagtattaggattcttttcaataaaatcctatggaatcataggttctgtcgttccca 321 Query: 301 ctgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttcttt 360 |||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||| Sbjct: 322 ctgcttctccttgaatggttaggtctgaattccacaatggagcttccaaaaaatttcttt 381 Query: 361 ccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaatttg 420 ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| Sbjct: 382 ccgagttaattttctcagttttattaaccagggcggctctttattattgctttaaatttc 441 Query: 421 tagttcttctttcaagttacaatttttcattctctattagttttattatattgatgcttt 480 |||||||| |||||||||| |||| | ||||||||||| |||||||||||||||||||| Sbjct: 442 tagttcttgtttcaagttatgatttctaattctctattatttttattatattgatgcttt 501 Query: 481 ttcacattgccttttatgatgtaattcatagaccatacacagnggaattctatatcttat 540 ||||||||| |||||||||| ||||||||||||||||| | ||||| |||||||||| Sbjct: 502 atcacattgctttttatgatgcaattcatagaccatacatattggaatcctatatcttac 561 Query: 541 ttatttcctcttccttctttctatcatccctccctttatccacatccctttagttttgct 600 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 562 ttaattcctcttccttctttctatcatccctccctttatccacatccctttagttttcct 621 Query: 601 tcacaacctanaatc 615 |||||||||| |||| Sbjct: 622 tcacaacctagaatc 636
>gb|AY847072.1| Melica altissima ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1139 Score = 781 bits (394), Expect = 0.0 Identities = 564/618 (91%), Gaps = 8/618 (1%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 |||||||||||||||||||||||| |||||| || |||||||||| ||||||| ||||| Sbjct: 784 aaagaagatctagaatatatccag-atgtgtatgtctatttatctatattctat-tttat 727 Query: 62 agataataatgtagtccttctaaaaaatatcc--ttatttttactcttattgaatcgcgg 119 ||||||| ||| ||||||| ||||| ||| |||||||||||||||||||||||||| Sbjct: 726 agataat---gtaatccttcttaaaaaaatctatttatttttactcttattgaatcgcgg 670 Query: 120 taaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatt 179 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 669 taaagtattctaattcaataagtatttcgcgggcgaatatttactctttcctgtcttatt 610 Query: 180 tgttaatttataaacttaccaaataagacaannnnnnnggtttgttccgccatcccaccc 239 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct: 609 tgttaatttataatcttaccaaataagacaatttttttggtttgttccgccatcccaccc 550 Query: 240 aatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccc 299 |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 549 aatgaagtattaggattcttttcaataaaatcctatggagtcataggttctgtcgttccc 490 Query: 300 actgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctt 359 ||||||||||| |||||||||||||||||||||||||| ||||||||| ||||| | || Sbjct: 489 actgcttctccctgaatggttaggtctgaatcccgcaatggagcttccttaaaatgtttt 430 Query: 360 tccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaattt 419 |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| Sbjct: 429 tccgagttaattttctcagttttattaaccgcggcggctctttattattgctttaaattt 370 Query: 420 gtagttcttctttcaagttacaatttttcattctctattagttttattatattgatgctt 479 ||| ||||| ||| ||||||| |||| ||||||| ||| ||||||||||||||||||| Sbjct: 369 gtacttcttattttaagttacgatttcgaattctctcttatttttattatattgatgctt 310 Query: 480 tttcacattgccttttatgatgtaattcatagaccatacacagnggaattctatatctta 539 | |||||||||||||||||||| ||||||||||||||||| | |||| ||||||||||| Sbjct: 309 tatcacattgccttttatgatgcaattcatagaccatacatattggaactctatatctta 250 Query: 540 tttatttcctcttccttctttctatcatccctccctttatccacatccctttagttttgc 599 || ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 249 ctt-ttttctcttccttctttctatcatccctccctttatccacatccctttagttttgc 191 Query: 600 ttcacaacctanaatccc 617 ||||||||||| |||||| Sbjct: 190 ttcacaacctagaatccc 173
>gb|AY847071.1| Glyceria striata ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1142 Score = 765 bits (386), Expect = 0.0 Identities = 562/618 (90%), Gaps = 8/618 (1%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 |||||||||| |||||||||| || |||||| || |||||||||| ||||||| ||| | Sbjct: 785 aaagaagatccagaatatatctag-atgtgtatgtctatttatctatattctat-tttct 728 Query: 62 agataataatgtagtccttct--aaaaaatatccttatttttactcttattgaatcgcgg 119 ||||||| ||| ||||||| |||||||||| |||||||||||||||||||||||||| Sbjct: 727 agataat---gtaatccttcttaaaaaaatatctttatttttactcttattgaatcgcgg 671 Query: 120 taaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatt 179 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 670 taaagtattctaattcaataagtatttcgcgggcgaatatttactctttcctgtcttatt 611 Query: 180 tgttaatttataaacttaccaaataagacaannnnnnnggtttgttccgccatcccaccc 239 ||||||||||||| |||||||||||||| || |||||||||||||||||||||| Sbjct: 610 tgttaatttataagcttaccaaataagagaatttttttggtttgttccgccatcccaccc 551 Query: 240 aatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccc 299 |||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||| Sbjct: 550 aatgaagtattaggattctttttaataaaatcctatggagtcataggttctgtcgttccc 491 Query: 300 actgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctt 359 ||||||||||| |||||||||||||||||||||||||| ||||||||| |||||| | || Sbjct: 490 actgcttctccctgaatggttaggtctgaatcccgcaatggagcttcctaaaaatatgtt 431 Query: 360 tccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaattt 419 |||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||| Sbjct: 430 tccgagttaattttctcagttttactaactgcggcggctctttattattgctttgaattt 371 Query: 420 gtagttcttctttcaagttacaatttttcattctctattagttttattatattgatgctt 479 ||||||||| ||| ||||||| |||| ||||||| ||| ||||||||||||||||||| Sbjct: 370 gtagttcttattttaagttacgatttcgaattctctcttatttttattatattgatgctt 311 Query: 480 tttcacattgccttttatgatgtaattcatagaccatacacagnggaattctatatctta 539 | |||||||||||||||||||| ||||||||||||||||| | |||||||||||||||| Sbjct: 310 tatcacattgccttttatgatgcaattcatagaccatacatattggaattctatatctta 251 Query: 540 tttatttcctcttccttctttctatcatccctccctttatccacatccctttagttttgc 599 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 250 cttattt-ctcttccttctttctatcatccctccctttatccacatccctttagttttgc 192 Query: 600 ttcacaacctanaatccc 617 ||||||||||| |||||| Sbjct: 191 ttcacaacctagaatccc 174
>gb|AY847115.1| Streptogyna americana ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1160 Score = 759 bits (383), Expect = 0.0 Identities = 562/620 (90%), Gaps = 11/620 (1%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||||| ||||||| ||||| Sbjct: 822 aaagaagatctagaatatatctag-atgtgtgtgtttatttatctatattctat-tttat 765 Query: 62 agataataatgtagtccttct-----aaaaaatatccttatttttactcttattgaatcg 116 ||||||| ||| || |||| ||||||| |||||||||||||||||||||||||| Sbjct: 764 agataat---gtaatctttcttaaaaaaaaaatctccttatttttactcttattgaatcg 708 Query: 117 cggtaaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtctt 176 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 707 cggtaaagtattctaattcaataaagatttcgcgggcgaatatttactctttcctgtctt 648 Query: 177 atttgttaatttataaacttaccaaataagacaannnnnnnggtttgttccgccatccca 236 ||||||||||| |||| ||||||||||||| ||| ||||||||||||||||||| Sbjct: 647 atttgttaattcataaccttaccaaataaggcaatttttttggtttgttccgccatccca 588 Query: 237 cccaatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgtt 296 ||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||| Sbjct: 587 cccaatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctgtcgtt 528 Query: 297 cccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaattt 356 |||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||| Sbjct: 527 cccactgcttctcctttaatggttaggtttgaatcccgcaatggagcttccaaaaaattt 468 Query: 357 ctttccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaa 416 |||||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 467 ctttccgagtcaattttatcagttttattaacccgggccgctctttattattgcttaaaa 408 Query: 417 tttgtagttcttctttcaagttacaatttttcattctctattagttttattatattgatg 476 ||| || ||||| ||||||||||| |||| ||||||| ||| |||||||||||||||| Sbjct: 407 tttttatttcttgtttcaagttacgatttcgaattctctgttatttttattatattgatg 348 Query: 477 ctttttcacattgccttttatgatgtaattcatagaccatacacagnggaattctatatc 536 |||| |||||||||||||||||||||||||||||||||||||| | ||||| ||||||| Sbjct: 347 ctttatcacattgccttttatgatgtaattcatagaccatacatattggaatcctatatc 288 Query: 537 ttatttatttcctcttccttctttctatcatccctccctttatccacatccctttagttt 596 || ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 287 tttctta-ttcctcttccttctttctatcatccctccttttatccacatccctttagttt 229 Query: 597 tgcttcacaacctanaatcc 616 ||||||||||| || ||||| Sbjct: 228 tgcttcacaacttagaatcc 209
>gb|AY847092.1| Arundoclaytonia dissimilis ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1053 Score = 747 bits (377), Expect = 0.0 Identities = 560/619 (90%), Gaps = 10/619 (1%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||||| ||||||| ||||| Sbjct: 718 aaagaagatctagaatatatctag-atgtgtgtgtctatttatctatattctat-tttat 661 Query: 62 agataataatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgc 117 | ||||||||| ||||||| ||||||| ||||||||||||||||||||||||||| Sbjct: 660 a---aataatgtaatccttcttttaaaaaaatctccttatttttactcttattgaatcgc 604 Query: 118 ggtaaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtctta 177 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 603 ggtaaagtattctaattcaataaagatttcgcgggcgaatatttactctttcctgtctta 544 Query: 178 tttgttaatttataaacttaccaaataagacaannnnnnnggtttgttccgccatcccac 237 ||||||||||| ||| ||||||||||||| ||| |||||||||||||||||||| Sbjct: 543 tttgttaatttgtaaccttaccaaataaggcaatttttttggtttgttccgccatcccac 484 Query: 238 ccaatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttc 297 |||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 483 ccaatgaagtattaggattcttttcaataaaatcctatccattcataggttctgtcgttc 424 Query: 298 ccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttc 357 ||||| ||||||||| ||||||||||||||||| || ||| ||||||||||||||||||| Sbjct: 423 ccactacttctcctttaatggttaggtctgaattccacaatggagcttccaaaaaatttc 364 Query: 358 tttccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaat 417 ||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 363 tttccgagtcaattttctcagttttcttaacccgggccgctctttattattgcttaaaat 304 Query: 418 ttgtagttcttctttcaagttacaatttttcattctctattagttttattatattgatgc 477 ||||| ||||| |||| |||||| |||| ||||||| ||| ||||||||||||||||| Sbjct: 303 ttgtatttcttgtttcgagttacgatttcgaattctctgttatttttattatattgatgc 244 Query: 478 tttttcacattgccttttatgatgtaattcatagaccatacacagnggaattctatatct 537 ||| |||||||||||||||||||||||||||||||||||||| | ||||| |||||||| Sbjct: 243 tttatcacattgccttttatgatgtaattcatagaccatacatattggaatcctatatct 184 Query: 538 tatttatttcctcttccttctttctatcatccctccctttatccacatccctttagtttt 597 | ||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 183 ttctta-ttcctcttctttctttctatcatccctccttttatccacatccctttagtttt 125 Query: 598 gcttcacaacctanaatcc 616 ||||||||||||| ||||| Sbjct: 124 gcttcacaacctagaatcc 106
>gb|AY912189.1| Arthrostylidium ecuadorense ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1224 Score = 741 bits (374), Expect = 0.0 Identities = 562/624 (90%), Gaps = 14/624 (2%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||||| ||||||||||||| Sbjct: 845 aaagaagatctagaatatatctag-atgtgtgtgtctatttatctatattctatatttat 787 Query: 62 agataataatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgc 117 | ||||||||| ||||||| ||||||| ||||||||||||||||||||||||||| Sbjct: 786 a---aataatgtaatccttcttttaaaaaaatctccttatttttactcttattgaatcgc 730 Query: 118 ggtaaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtctta 177 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 729 ggtaaagtattctaattcaataaagatttcgcgggcgaatatttactctttcctgtctta 670 Query: 178 tttgttaatttata-----aacttaccaaataagacaannnnnnnggtttgttccgccat 232 |||||||||||||| | ||||||||||||| ||| ||||||||||||||| Sbjct: 669 tttgttaatttatattataaccttaccaaataaggcaatttttttggtttgttccgccat 610 Query: 233 cccacccaatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgt 292 ||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||| Sbjct: 609 cccacccaatgaagtattaggattcttttcaataaaatcctatccattcataggttctgt 550 Query: 293 cgttcccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaa 352 |||||||||| ||||||||| ||||||||||||||||| || ||| |||||||||||||| Sbjct: 549 cgttcccactacttctcctttaatggttaggtctgaattccacaatggagcttccaaaaa 490 Query: 353 atttctttccgagttaattttctcagttttattaacccgggcggctctttattattgctt 412 |||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 489 atttctttccgagtcaattttctcagttttcttaacccgggccgctctttattattgctt 430 Query: 413 aaaatttgtagttcttctttcaagttacaatttttcattctctattagttttattatatt 472 |||||||||| ||||| |||| |||||| |||| ||||||| ||| |||||||||||| Sbjct: 429 aaaatttgtatttcttgtttcgagttacgatttcgaattctctgttatttttattatatt 370 Query: 473 gatgctttttcacattgccttttatgatgtaattcatagaccatacacagnggaattcta 532 |||||||| |||||||||||||||||||||||||||||||||||||| | ||||| ||| Sbjct: 369 gatgctttatcacattgccttttatgatgtaattcatagaccatacatattggaatccta 310 Query: 533 tatcttatttatttcctcttccttctttctatcatccctccctttatccacatcccttta 592 |||||| ||| ||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 309 tatctttctta-ttcctcttctttctttctatcatccctccttttatccacatcccttta 251 Query: 593 gttttgcttcacaacctanaatcc 616 |||||||||||||||||| ||||| Sbjct: 250 gttttgcttcacaacctagaatcc 227
>gb|AY912212.1| Sirochloa parvifolia ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1217 Score = 733 bits (370), Expect = 0.0 Identities = 561/624 (89%), Gaps = 14/624 (2%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||||| ||||||||||||| Sbjct: 838 aaagaagatctagaatatatctag-atgtgtgtgtctatttatctatattctatatttat 780 Query: 62 agataataatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgc 117 ||||||| ||| || |||| ||||||| ||||||||||||||||||||||||||| Sbjct: 779 agataat---gtaatctttcttaacaaaaaatctccttatttttactcttattgaatcgc 723 Query: 118 ggtaaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtctta 177 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 722 ggtaaagtattctaattcaataaagatttcgcgggcgaatatttactctttcctgtctta 663 Query: 178 tttgttaatttata-----aacttaccaaataagacaannnnnnnggtttgttccgccat 232 |||||||||||||| | ||||||||||||| ||| ||||||||||||||| Sbjct: 662 tttgttaatttatattataaccttaccaaataaggcaattattttggtttgttccgccat 603 Query: 233 cccacccaatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgt 292 ||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||| Sbjct: 602 cccacccaatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctgt 543 Query: 293 cgttcccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaa 352 |||||||||| ||||||||| |||||||||||||||||||| ||| |||||||||||||| Sbjct: 542 cgttcccactacttctcctttaatggttaggtctgaatcccacaatggagcttccaaaaa 483 Query: 353 atttctttccgagttaattttctcagttttattaacccgggcggctctttattattgctt 412 |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| || Sbjct: 482 atttctttccgagtcaattttctcagttttattaacccgggccgctctttattattgttt 423 Query: 413 aaaatttgtagttcttctttcaagttacaatttttcattctctattagttttattatatt 472 ||||||||| ||||| ||||||||||| |||| ||||||| ||| |||||||||||| Sbjct: 422 taaatttgtatttcttgtttcaagttacgatttcgaattctctgttatttttattatatt 363 Query: 473 gatgctttttcacattgccttttatgatgtaattcatagaccatacacagnggaattcta 532 |||||||| ||||||||| ||||||||||||| |||||||||||||| | ||||| ||| Sbjct: 362 gatgctttatcacattgctttttatgatgtaactcatagaccatacatattggaatccta 303 Query: 533 tatcttatttatttcctcttccttctttctatcatccctccctttatccacatcccttta 592 |||||| ||| ||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 302 tatctttctta-ttcctcttctttctttctatcatccctccttttatccacatcccttta 244 Query: 593 gttttgcttcacaacctanaatcc 616 |||||||||||||||||| ||||| Sbjct: 243 gttttgcttcacaacctagaatcc 220
>gb|AY912199.1| Cephalostachyum pergracile ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1226 Score = 733 bits (370), Expect = 0.0 Identities = 561/624 (89%), Gaps = 14/624 (2%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||||| ||||||||||||| Sbjct: 847 aaagaagatctagaatatatctag-atgtgtgtgtctatttatctatattctatatttat 789 Query: 62 agataataatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgc 117 ||||||| ||| || |||| ||||||| ||||||||||||||||||||||||||| Sbjct: 788 agataat---gtaatctttcttaacaaaaaatctccttatttttactcttattgaatcgc 732 Query: 118 ggtaaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtctta 177 ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 731 ggtaaagtattttaattcaataaagatttcgcgggcgaatatttactctttcctgtctta 672 Query: 178 tttgttaatttata-----aacttaccaaataagacaannnnnnnggtttgttccgccat 232 |||||||||||||| | ||||||||||||| ||| ||||||||||||||| Sbjct: 671 tttgttaatttatattataaccttaccaaataaggcaatttttttggtttgttccgccat 612 Query: 233 cccacccaatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgt 292 ||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||| Sbjct: 611 cccacccaatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctgt 552 Query: 293 cgttcccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaa 352 |||||||||| ||||||||| |||||||||||||||||||| ||| |||||||||||||| Sbjct: 551 cgttcccactacttctcctttaatggttaggtctgaatcccacaatggagcttccaaaaa 492 Query: 353 atttctttccgagttaattttctcagttttattaacccgggcggctctttattattgctt 412 |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| || Sbjct: 491 atttctttccgagtcaattttctcagttttattaacccgggccgctctttattattgttt 432 Query: 413 aaaatttgtagttcttctttcaagttacaatttttcattctctattagttttattatatt 472 ||||||||| ||||| ||||||||||| |||| ||||||| ||| |||||||||||| Sbjct: 431 taaatttgtatttcttgtttcaagttacgatttcgaattctctgttatttttattatatt 372 Query: 473 gatgctttttcacattgccttttatgatgtaattcatagaccatacacagnggaattcta 532 |||||||| ||||||||||||||||||||||| |||||||||||||| | ||||| ||| Sbjct: 371 gatgctttatcacattgccttttatgatgtaactcatagaccatacatattggaatccta 312 Query: 533 tatcttatttatttcctcttccttctttctatcatccctccctttatccacatcccttta 592 |||||| ||| ||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 311 tatctttctta-ttcctcttctttctttctatcatccctccttttatccacatcccttta 253 Query: 593 gttttgcttcacaacctanaatcc 616 |||||||||||||||||| ||||| Sbjct: 252 gttttgcttcacaacctagaatcc 229
>gb|AY912193.1| Oxytenanthera abyssinica ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1222 Score = 733 bits (370), Expect = 0.0 Identities = 561/624 (89%), Gaps = 14/624 (2%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||||| ||||||||||||| Sbjct: 843 aaagaagatctagaatatatctag-atgtgtgtgtctatttatctatattctatatttat 785 Query: 62 agataataatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgc 117 |||||| ||| || |||| ||||||| ||||||||||||||||||||||||||| Sbjct: 784 ggataat---gtaatctttcttaacaaaaaatctccttatttttactcttattgaatcgc 728 Query: 118 ggtaaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtctta 177 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 727 ggtaaagtattctaattcaataaagatttcgcgggcgaatatttactctttcctgtctta 668 Query: 178 tttgttaatttata-----aacttaccaaataagacaannnnnnnggtttgttccgccat 232 |||||||||||||| | ||||||||||||| ||| ||||||||||||||| Sbjct: 667 tttgttaatttatattataaccttaccaaataaggcaatttttttggtttgttccgccat 608 Query: 233 cccacccaatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgt 292 ||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||| Sbjct: 607 cccacccaatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctgt 548 Query: 293 cgttcccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaa 352 |||||||||| ||||||||| |||||||||||||||||||| ||| |||||||||||||| Sbjct: 547 cgttcccactacttctcctttaatggttaggtctgaatcccacaatggagcttccaaaaa 488 Query: 353 atttctttccgagttaattttctcagttttattaacccgggcggctctttattattgctt 412 |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| || Sbjct: 487 atttctttccgagtcaattttctcagttttattaacccgggccgctctttattattgttt 428 Query: 413 aaaatttgtagttcttctttcaagttacaatttttcattctctattagttttattatatt 472 ||||||||| ||||| ||||||||||| |||| ||||||| ||| |||||||||||| Sbjct: 427 taaatttgtatttcttgtttcaagttacgatttcgaattctctgttatttttattatatt 368 Query: 473 gatgctttttcacattgccttttatgatgtaattcatagaccatacacagnggaattcta 532 |||||||| ||||||||||||||||||||||| |||||||||||||| | ||||| ||| Sbjct: 367 gatgctttatcacattgccttttatgatgtaactcatagaccatacatattggaatccta 308 Query: 533 tatcttatttatttcctcttccttctttctatcatccctccctttatccacatcccttta 592 |||||| ||| ||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 307 tatctttctta-ttcctcttctttctttctatcatccctccttttatccacatcccttta 249 Query: 593 gttttgcttcacaacctanaatcc 616 |||||||||||||||||| ||||| Sbjct: 248 gttttgcttcacaacctagaatcc 225
>gb|AY912192.1| Bambusa vulgaris ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1227 Score = 733 bits (370), Expect = 0.0 Identities = 561/624 (89%), Gaps = 14/624 (2%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||||| ||||||||||||| Sbjct: 848 aaagaagatctagaatatatctag-atgtgtgtgtctatttatctatattctatatttat 790 Query: 62 agataataatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgc 117 |||||| ||| || |||| ||||||| ||||||||||||||||||||||||||| Sbjct: 789 ggataat---gtaatctttcttaacaaaaaatctccttatttttactcttattgaatcgc 733 Query: 118 ggtaaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtctta 177 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 732 ggtaaagtattctaattcaataaagatttcgcgggcgaatatttactctttcctgtctta 673 Query: 178 tttgttaatttata-----aacttaccaaataagacaannnnnnnggtttgttccgccat 232 |||||||||||||| | ||||||||||||| ||| ||||||||||||||| Sbjct: 672 tttgttaatttatattataaccttaccaaataaggcaatttttttggtttgttccgccat 613 Query: 233 cccacccaatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgt 292 ||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||| Sbjct: 612 cccacccaatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctgt 553 Query: 293 cgttcccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaa 352 |||||||||| ||||||||| |||||||||||||||||||| ||| |||||||||||||| Sbjct: 552 cgttcccactacttctcctttaatggttaggtctgaatcccacaatggagcttccaaaaa 493 Query: 353 atttctttccgagttaattttctcagttttattaacccgggcggctctttattattgctt 412 |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| || Sbjct: 492 atttctttccgagtcaattttctcagttttattaacccgggccgctctttattattgttt 433 Query: 413 aaaatttgtagttcttctttcaagttacaatttttcattctctattagttttattatatt 472 ||||||||| ||||| ||||||||||| |||| ||||||| ||| |||||||||||| Sbjct: 432 taaatttgtatttcttgtttcaagttacgatttcgaattctctgttatttttattatatt 373 Query: 473 gatgctttttcacattgccttttatgatgtaattcatagaccatacacagnggaattcta 532 |||||||| ||||||||||||||||||||||| |||||||||||||| | ||||| ||| Sbjct: 372 gatgctttatcacattgccttttatgatgtaactcatagaccatacatattggaatccta 313 Query: 533 tatcttatttatttcctcttccttctttctatcatccctccctttatccacatcccttta 592 |||||| ||| ||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 312 tatctttctta-ttcctcttctttctttctatcatccctccttttatccacatcccttta 254 Query: 593 gttttgcttcacaacctanaatcc 616 |||||||||||||||||| ||||| Sbjct: 253 gttttgcttcacaacctagaatcc 230
>gb|AY912213.1| Valiha diffusa ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1163 Score = 726 bits (366), Expect = 0.0 Identities = 560/624 (89%), Gaps = 14/624 (2%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||| | ||||||||||||| Sbjct: 837 aaagaagatctagaatatatctag-atgtgtgtgtctatttatccatattctatatttat 779 Query: 62 agataataatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgc 117 ||||||| ||| || |||| ||||||| ||||||||||||||||||||||||||| Sbjct: 778 agataat---gtaatctttcttaacaaaaaatctccttatttttactcttattgaatcgc 722 Query: 118 ggtaaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtctta 177 ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| Sbjct: 721 ggtaaagtattctaattcaataaagatttcgcgggcgaatattaactctttcctgtctta 662 Query: 178 tttgttaatttata-----aacttaccaaataagacaannnnnnnggtttgttccgccat 232 |||||||||||||| | ||||||||||||| ||| ||||||||||||||| Sbjct: 661 tttgttaatttatattataaccttaccaaataaggcaattattttggtttgttccgccat 602 Query: 233 cccacccaatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgt 292 ||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||| Sbjct: 601 cccacccaatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctgt 542 Query: 293 cgttcccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaa 352 |||||||||| ||||||||| |||||||||||||||||||| ||| |||||||||||||| Sbjct: 541 cgttcccactacttctcctttaatggttaggtctgaatcccacaatggagcttccaaaaa 482 Query: 353 atttctttccgagttaattttctcagttttattaacccgggcggctctttattattgctt 412 |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| || Sbjct: 481 atttctttccgagtcaattttctcagttttattaacccgggccgctctttattattgttt 422 Query: 413 aaaatttgtagttcttctttcaagttacaatttttcattctctattagttttattatatt 472 |||||||||| ||||| ||||||||||| |||| ||||||| ||| |||||||||||| Sbjct: 421 aaaatttgtatttcttgtttcaagttacgatttcgaattctctgttatttttattatatt 362 Query: 473 gatgctttttcacattgccttttatgatgtaattcatagaccatacacagnggaattcta 532 |||||||| ||||||||| ||||||||||||| |||||||||||||| | ||||| ||| Sbjct: 361 gatgctttatcacattgctttttatgatgtaactcatagaccatacatattggaatccta 302 Query: 533 tatcttatttatttcctcttccttctttctatcatccctccctttatccacatcccttta 592 |||||| ||| ||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 301 tatctttctta-ttcctcttctttctttctatcatccctccttttatccacatcccttta 243 Query: 593 gttttgcttcacaacctanaatcc 616 |||||||||||||||||| ||||| Sbjct: 242 gttttgcttcacaacctagaatcc 219
>gb|AY912202.1| Cathariostachys madagascariensis ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1085 Score = 726 bits (366), Expect = 0.0 Identities = 560/624 (89%), Gaps = 14/624 (2%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||||| ||||||||||||| Sbjct: 838 aaagaagatctagaatatatctag-atgtgtgtgtctatttatctatattctatatttat 780 Query: 62 agataataatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgc 117 ||||||| ||| || |||| ||||||| ||||||||||||||||||||||||||| Sbjct: 779 agataat---gtaatctttcttaacaaaaaatctccttatttttactcttattgaatcgc 723 Query: 118 ggtaaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtctta 177 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 722 ggtaaagtattctaattcaataaagatttcgcgggcgaatatttactctttcctgtctta 663 Query: 178 tttgttaatttata-----aacttaccaaataagacaannnnnnnggtttgttccgccat 232 |||||||||||||| | |||| |||||||| ||| ||||||||||||||| Sbjct: 662 tttgttaatttatattataaccttatcaaataaggcaattattttggtttgttccgccat 603 Query: 233 cccacccaatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgt 292 ||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||| Sbjct: 602 cccacccaatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctgt 543 Query: 293 cgttcccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaa 352 |||||||||| ||||||||| |||||||||||||||||||| ||| |||||||||||||| Sbjct: 542 cgttcccactacttctcctttaatggttaggtctgaatcccacaatggagcttccaaaaa 483 Query: 353 atttctttccgagttaattttctcagttttattaacccgggcggctctttattattgctt 412 |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| || Sbjct: 482 atttctttccgagtcaattttctcagttttattaacccgggccgctctttattattgttt 423 Query: 413 aaaatttgtagttcttctttcaagttacaatttttcattctctattagttttattatatt 472 ||||||||| ||||| ||||||||||| |||| ||||||| ||| |||||||||||| Sbjct: 422 taaatttgtatttcttgtttcaagttacgatttcgaattctctgttatttttattatatt 363 Query: 473 gatgctttttcacattgccttttatgatgtaattcatagaccatacacagnggaattcta 532 |||||||| ||||||||| ||||||||||||| |||||||||||||| | ||||| ||| Sbjct: 362 gatgctttatcacattgctttttatgatgtaactcatagaccatacatattggaatccta 303 Query: 533 tatcttatttatttcctcttccttctttctatcatccctccctttatccacatcccttta 592 |||||| ||| ||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 302 tatctttctta-ttcctcttctttctttctatcatccctccttttatccacatcccttta 244 Query: 593 gttttgcttcacaacctanaatcc 616 |||||||||||||||||| ||||| Sbjct: 243 gttttgcttcacaacctagaatcc 220
>gb|AY912208.1| Nastus elegantissimus ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1224 Score = 718 bits (362), Expect = 0.0 Identities = 559/624 (89%), Gaps = 14/624 (2%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||||| ||||||||||||| Sbjct: 846 aaagaagatctagaatatatctag-atgtgtgtgtctatttatctatattctatatttat 788 Query: 62 agataataatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgc 117 ||||||| ||| || |||| ||||||| ||||||||||||||||||||||||||| Sbjct: 787 agataat---gtaatctttcttaacaaaaaatctccttatttttactcttattgaatcgc 731 Query: 118 ggtaaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtctta 177 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 730 ggtaaagtattctaattcaataaagatttcgcgggcgaatatttactctttcctgtctta 671 Query: 178 tttgttaatttata-----aacttaccaaataagacaannnnnnnggtttgttccgccat 232 |||||||||||||| | ||||||||||||| ||| ||||||||||||||| Sbjct: 670 tttgttaatttatattaaaaccttaccaaataaggcaatttttttggtttgttccgccat 611 Query: 233 cccacccaatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgt 292 ||||||||||||||| ||||||||||||||||||||||||| || | ||||||||||||| Sbjct: 610 cccacccaatgaagtattaggattcttttcaataaaatcctgtgcagtcataggttctgt 551 Query: 293 cgttcccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaa 352 |||||||||| ||||||||| |||| ||||||||||||||| ||| |||||||||||||| Sbjct: 550 cgttcccactacttctcctttaatgattaggtctgaatcccacaatggagcttccaaaaa 491 Query: 353 atttctttccgagttaattttctcagttttattaacccgggcggctctttattattgctt 412 |||||||||||||| |||||| |||||||||||||||||||| |||||||||||||| || Sbjct: 490 atttctttccgagtcaattttatcagttttattaacccgggccgctctttattattgttt 431 Query: 413 aaaatttgtagttcttctttcaagttacaatttttcattctctattagttttattatatt 472 ||||||||| ||||| ||||||||||| |||| ||||||| ||| |||||||||||| Sbjct: 430 taaatttgtatttcttgtttcaagttacgatttcgaattctctgttatttttattatatt 371 Query: 473 gatgctttttcacattgccttttatgatgtaattcatagaccatacacagnggaattcta 532 |||||||| ||||||||||||||||||||||| |||||||||||||| | ||||| ||| Sbjct: 370 gatgctttatcacattgccttttatgatgtaactcatagaccatacatattggaatccta 311 Query: 533 tatcttatttatttcctcttccttctttctatcatccctccctttatccacatcccttta 592 |||||| ||| ||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 310 tatctttctta-ttcctcttctttctttctatcatccctccttttatccacatcccttta 252 Query: 593 gttttgcttcacaacctanaatcc 616 |||||||||||||||||| ||||| Sbjct: 251 gttttgcttcacaacctagaatcc 228
>gb|AY912207.1| Nastus borbonicus ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1219 Score = 718 bits (362), Expect = 0.0 Identities = 559/624 (89%), Gaps = 14/624 (2%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||||| |||| |||||||| Sbjct: 847 aaagaagatctagaatatatctag-atgtgtgtgtctatttatctatattccatatttat 789 Query: 62 agataataatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgc 117 ||||||| ||| || |||| ||||||| ||||||||||||||||||||||||||| Sbjct: 788 agataat---gtaatctttcttaacaaaaaatctccttatttttactcttattgaatcgc 732 Query: 118 ggtaaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtctta 177 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 731 ggtaaagtattctaattcaataaagatttcgcgggcgaatatttactctttcctgtctta 672 Query: 178 tttgttaatttata-----aacttaccaaataagacaannnnnnnggtttgttccgccat 232 |||||||||||||| | ||||||||||||| ||| ||||||||||||||| Sbjct: 671 tttgttaatttatattataaccttaccaaataaggcaatttttttggtttgttccgccat 612 Query: 233 cccacccaatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgt 292 ||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||| Sbjct: 611 cccacccaatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctgt 552 Query: 293 cgttcccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaa 352 |||||||||| ||||||||| |||||||||||||||||||| ||| |||||||||||||| Sbjct: 551 cgttcccactacttctcctttaatggttaggtctgaatcccacaatggagcttccaaaaa 492 Query: 353 atttctttccgagttaattttctcagttttattaacccgggcggctctttattattgctt 412 |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| || Sbjct: 491 atttctttccgagtcaattttctcagttttattaacccgggccgctctttattattgttt 432 Query: 413 aaaatttgtagttcttctttcaagttacaatttttcattctctattagttttattatatt 472 ||||||||| ||||| ||||||||||| |||| ||||||| ||| ||||| |||||| Sbjct: 431 taaatttgtatttcttgtttcaagttacgatttcgaattctctgttatttttaatatatt 372 Query: 473 gatgctttttcacattgccttttatgatgtaattcatagaccatacacagnggaattcta 532 |||||||| ||||||||| ||||||||||||| |||||||||||||| | ||||| ||| Sbjct: 371 gatgctttatcacattgctttttatgatgtaactcatagaccatacatattggaatccta 312 Query: 533 tatcttatttatttcctcttccttctttctatcatccctccctttatccacatcccttta 592 |||||| ||| ||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 311 tatctttctta-ttcctcttctttctttctatcatccctccttttatccacatcccttta 253 Query: 593 gttttgcttcacaacctanaatcc 616 |||||||||||||||||| ||||| Sbjct: 252 gttttgcttcacaacctagaatcc 229
>gb|AY912216.1| Streptogyna americana ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1172 Score = 716 bits (361), Expect = 0.0 Identities = 563/630 (89%), Gaps = 20/630 (3%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||||| ||||||||||||| Sbjct: 834 aaagaagatctagaatatatctag-atgtgtgtgtttatttatctatattctatatttat 776 Query: 62 agataataatgtagtccttct-----aaaaaatatccttattttta-----ctctt---- 107 ||||| ||||| || |||| ||||||| |||||||||||| ||||| Sbjct: 775 agata---atgtaatctttcttaaaaaaaaaatctccttatttttattttactcttattg 719 Query: 108 -attgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaatatttactct 166 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 718 aattgaatcgcggtaaagtattctaattcaataaagatttcgcgggcgaatatttactct 659 Query: 167 ttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnnggtttgttc 226 ||||||||||||||||||||| |||| ||||||||||||| ||| ||||||||| Sbjct: 658 ttcctgtcttatttgttaattcataaccttaccaaataaggcaatttttttggtttgttc 599 Query: 227 cgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatcatagg 286 ||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||| Sbjct: 598 cgccatcccacccaatgaagtattaggattcttttcaataaaatcctatgcagtcatagg 539 Query: 287 ttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttc 346 |||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||| Sbjct: 538 ttctgtcgttcccactgcttctcctttaatggttaggtttgaatcccgcaatggagcttc 479 Query: 347 caaaaaatttctttccgagttaattttctcagttttattaacccgggcggctctttatta 406 |||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||| Sbjct: 478 caaaaaatttctttccgagtcaattttatcagttttattaacccgggccgctctttatta 419 Query: 407 ttgcttaaaatttgtagttcttctttcaagttacaatttttcattctctattagttttat 466 ||||||||||||| || ||||| ||||||||||| |||| ||||||| ||| |||||| Sbjct: 418 ttgcttaaaatttttatttcttgtttcaagttacgatttcgaattctctgttatttttat 359 Query: 467 tatattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagngga 526 |||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||| Sbjct: 358 tatattgatgctttatcacattgccttttatgatgtaattcatagaccatacatattgga 299 Query: 527 attctatatcttatttatttcctcttccttctttctatcatccctccctttatccacatc 586 || ||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 298 atcctatatctttctta-ttcctcttccttctttctatcatccctccttttatccacatc 240 Query: 587 cctttagttttgcttcacaacctanaatcc 616 ||||||||||||||||||||| || ||||| Sbjct: 239 cctttagttttgcttcacaacttagaatcc 210
>gb|AY912211.1| Perrierbambus madagascariensis ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1214 Score = 712 bits (359), Expect = 0.0 Identities = 561/628 (89%), Gaps = 15/628 (2%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||||| ||||||||||||| Sbjct: 836 aaagaagatctagaatatatctag-atgtgtgtgtctatttatctatattctatatttat 778 Query: 62 agataata----atgtagtccttct----aaaaaatatccttatttttactcttattgaa 113 |||| ||| ||||| || |||| ||||||| ||||||||||||||||||||||| Sbjct: 777 agattatagataatgtaatctttcttaacaaaaaatctccttatttttactcttattgaa 718 Query: 114 tcgcggtaaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgt 173 ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct: 717 tcgcggtaaagtattctaattcaataaagatttcccgggcgaatatttactctttcctgt 658 Query: 174 cttatttgttaatttata-----aacttaccaaataagacaannnnnnnggtttgttccg 228 |||||||||||||||||| | ||||||||||||| ||| ||||||||||| Sbjct: 657 cttatttgttaatttatattataaccttaccaaataaggcaattattttggtttgttccg 598 Query: 229 ccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatcataggtt 288 ||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||| Sbjct: 597 ccatcccacccaatgaagtattaggattcttttcaataaaatcctatgcagtcataggtt 538 Query: 289 ctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttcca 348 |||||||||||||| ||||||||| |||||||||||||||||||| ||| |||||||||| Sbjct: 537 ctgtcgttcccactacttctcctttaatggttaggtctgaatcccacaatggagcttcca 478 Query: 349 aaaaatttctttccgagttaattttctcagttttattaacccgggcggctctttattatt 408 |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| Sbjct: 477 aaaaatttctttccgagtcaattttctcagttttattaacccgggccgctctttattatt 418 Query: 409 gcttaaaatttgtagttcttctttcaagttacaatttttcattctctattagttttatta 468 | |||||||||| ||||| ||||||||||| |||| ||||||| ||| |||||||| Sbjct: 417 tttaaaaatttgtatttcttgtttcaagttacgatttcgaattctctgttatttttatta 358 Query: 469 tattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagnggaat 528 |||||||||||| ||||||||| ||||||||||||| |||||||||||||| | ||||| Sbjct: 357 tattgatgctttatcacattgctttttatgatgtaactcatagaccatacatattggaat 298 Query: 529 tctatatcttatttatttcctcttccttctttctatcatccctccctttatccacatccc 588 ||||||||| ||| ||||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 297 cctatatctttctta-ttcctcttctttctttctatcatccctccttttatccacatccc 239 Query: 589 tttagttttgcttcacaacctanaatcc 616 |||||||||||||||||||||| ||||| Sbjct: 238 tttagttttgcttcacaacctagaatcc 211
>gb|AF133469.1|AF133469 Nastus elatus ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1211 Score = 712 bits (359), Expect = 0.0 Identities = 559/624 (89%), Gaps = 16/624 (2%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||||| ||||||||||||| Sbjct: 867 aaagaagatctagaatatatctag-atgtgtgtgtctatttatctatattctatatttat 809 Query: 62 agataataatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgc 117 ||||| |||| || |||| ||||||| |||||||||| |||||||||||||||| Sbjct: 808 agata----tgtaatctttcttaacaaaaaatctccttatttt-actcttattgaatcgc 754 Query: 118 ggtaaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtctta 177 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 753 ggtaaagtattctaattcaataaagatttcgcgggcgaatatttactctttcctgtctta 694 Query: 178 tttgttaatttata-----aacttaccaaataagacaannnnnnnggtttgttccgccat 232 |||||||||||||| | ||||||||||||| ||| ||||||||||||||| Sbjct: 693 tttgttaatttatattataaccttaccaaataaggcaatttttttggtttgttccgccat 634 Query: 233 cccacccaatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgt 292 ||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||| Sbjct: 633 cccacccaatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctgt 574 Query: 293 cgttcccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaa 352 |||||||||| ||||||||| |||| ||||||||||||||| ||| |||||||||||||| Sbjct: 573 cgttcccactacttctcctttaatgattaggtctgaatcccacaatggagcttccaaaaa 514 Query: 353 atttctttccgagttaattttctcagttttattaacccgggcggctctttattattgctt 412 |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| || Sbjct: 513 atttctttccgagtcaattttctcagttttattaacccgggccgctctttattattgttt 454 Query: 413 aaaatttgtagttcttctttcaagttacaatttttcattctctattagttttattatatt 472 ||||||||| ||||| ||||||||||| |||| ||||||| ||| |||||||||||| Sbjct: 453 taaatttgtatttcttgtttcaagttacgatttcgaattctctgttatttttattatatt 394 Query: 473 gatgctttttcacattgccttttatgatgtaattcatagaccatacacagnggaattcta 532 |||||||| ||||||||||||||||||||||| |||||||||||||| | ||||| ||| Sbjct: 393 gatgctttatcacattgccttttatgatgtaactcatagaccatacatattggaatccta 334 Query: 533 tatcttatttatttcctcttccttctttctatcatccctccctttatccacatcccttta 592 |||||| ||| ||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 333 tatctttctta-ttcctcttctttctttctatcatccctccttttatccacatcccttta 275 Query: 593 gttttgcttcacaacctanaatcc 616 |||||||||||||||||| ||||| Sbjct: 274 gttttgcttcacaacctagaatcc 251
>gb|AF133461.1|AF133461 Buergersiochloa bambusoides ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1216 Score = 712 bits (359), Expect = 0.0 Identities = 555/616 (90%), Gaps = 8/616 (1%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 |||||||||| |||||||||| || ||||||||| |||||||||| ||||||||||||| Sbjct: 853 aaagaagatccagaatatatctag-atgtgtgtgtctatttatctatattctatatttat 795 Query: 62 agataataatgtagtccttctaaaaaatatccttatttttactcttattgaatcgcggta 121 |||| |||||| | | ||||||| |||||||||| |||||||||||||||||||| Sbjct: 794 agat---aatgtatta-taaaaaaaaatctccttatttt-actcttattgaatcgcggta 740 Query: 122 aagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttg 181 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 739 aagtattctaattcaataaggatttcgcgggcgaatatttactctttcctgtcttatttg 680 Query: 182 ttaatttataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaa 241 ||||||||||| ||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 679 ttaatttataaccttaccaaataaggcaatttttttggtttgttccgccatcccacccaa 620 Query: 242 tgaagtgttaggattcttttcaataaaa-tcctatggaatcataggttctgtcgttccca 300 |||||| |||| ||||||||||| |||| ||||||| | ||||||||||||||||||||| Sbjct: 619 tgaagtattagaattcttttcaaaaaaaatcctatgtagtcataggttctgtcgttccca 560 Query: 301 ctgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttcttt 360 || ||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||| Sbjct: 559 ctacttctcctttaatggttaggtctgaatcccacaatggagcttccaaaaaatttcttt 500 Query: 361 ccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaatttg 420 |||||| |||||||||||||||||||||||| || ||||||||||||||||| ||||||| Sbjct: 499 ccgagtcaattttctcagttttattaacccgagctgctctttattattgctttaaatttg 440 Query: 421 tagttcttctttcaagttacaatttttcattctctattagttttattatattgatgcttt 480 || ||||| |||||||||||||||| ||||||| ||| |||||||||||||||||||| Sbjct: 439 tatttcttgtttcaagttacaatttcgaattctctgttatttttattatattgatgcttt 380 Query: 481 ttcacattgccttttatgatgtaattcatagaccatacacagnggaattctatatcttat 540 | ||||||||||||||||||||| |||||||||||||| | ||||| ||||||||| Sbjct: 379 attacattgccttttatgatgtaactcatagaccatacatattggaatcctatatctttc 320 Query: 541 ttatttcctcttccttctttctatcatccctccctttatccacatccctttagttttgct 600 ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 319 tta-ttcctcttccttctttctatcatccctccttttatccacatccctttagttttgct 261 Query: 601 tcacaacctanaatcc 616 ||||||| || ||||| Sbjct: 260 tcacaacgtagaatcc 245
>gb|U54746.1|NEU54746 Nastus elatus ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1071 Score = 712 bits (359), Expect = 0.0 Identities = 559/624 (89%), Gaps = 16/624 (2%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||||| ||||||||||||| Sbjct: 844 aaagaagatctagaatatatctag-atgtgtgtgtctatttatctatattctatatttat 786 Query: 62 agataataatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgc 117 ||||| |||| || |||| ||||||| |||||||||| |||||||||||||||| Sbjct: 785 agata----tgtaatctttcttaacaaaaaatctccttatttt-actcttattgaatcgc 731 Query: 118 ggtaaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtctta 177 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 730 ggtaaagtattctaattcaataaagatttcgcgggcgaatatttactctttcctgtctta 671 Query: 178 tttgttaatttata-----aacttaccaaataagacaannnnnnnggtttgttccgccat 232 |||||||||||||| | ||||||||||||| ||| ||||||||||||||| Sbjct: 670 tttgttaatttatattataaccttaccaaataaggcaatttttttggtttgttccgccat 611 Query: 233 cccacccaatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgt 292 ||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||| Sbjct: 610 cccacccaatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctgt 551 Query: 293 cgttcccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaa 352 |||||||||| ||||||||| |||| ||||||||||||||| ||| |||||||||||||| Sbjct: 550 cgttcccactacttctcctttaatgattaggtctgaatcccacaatggagcttccaaaaa 491 Query: 353 atttctttccgagttaattttctcagttttattaacccgggcggctctttattattgctt 412 |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| || Sbjct: 490 atttctttccgagtcaattttctcagttttattaacccgggccgctctttattattgttt 431 Query: 413 aaaatttgtagttcttctttcaagttacaatttttcattctctattagttttattatatt 472 ||||||||| ||||| ||||||||||| |||| ||||||| ||| |||||||||||| Sbjct: 430 taaatttgtatttcttgtttcaagttacgatttcgaattctctgttatttttattatatt 371 Query: 473 gatgctttttcacattgccttttatgatgtaattcatagaccatacacagnggaattcta 532 |||||||| ||||||||||||||||||||||| |||||||||||||| | ||||| ||| Sbjct: 370 gatgctttatcacattgccttttatgatgtaactcatagaccatacatattggaatccta 311 Query: 533 tatcttatttatttcctcttccttctttctatcatccctccctttatccacatcccttta 592 |||||| ||| ||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 310 tatctttctta-ttcctcttctttctttctatcatccctccttttatccacatcccttta 252 Query: 593 gttttgcttcacaacctanaatcc 616 |||||||||||||||||| ||||| Sbjct: 251 gttttgcttcacaacctagaatcc 228
>gb|AY912203.1| Decaryochloa diadelpha ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1173 Score = 710 bits (358), Expect = 0.0 Identities = 558/624 (89%), Gaps = 14/624 (2%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 |||||||||| |||||||||| || ||||||||| |||||||||| ||||||||||||| Sbjct: 845 aaagaagatccagaatatatctag-atgtgtgtgtctatttatctatattctatatttat 787 Query: 62 agataataatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgc 117 ||||||| ||| || |||| ||||||| ||||||||||||||||||||||||||| Sbjct: 786 agataat---gtaatctttcttaacaaaaaatctccttatttttactcttattgaatcgc 730 Query: 118 ggtaaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtctta 177 ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| Sbjct: 729 ggtaaagtattctaattcaataaagatttcgcgggcgaatattgactctttcctgtctta 670 Query: 178 tttgttaattt-----ataaacttaccaaataagacaannnnnnnggtttgttccgccat 232 ||||||||||| |||| ||||||||||||| ||| ||||||||||||||| Sbjct: 669 tttgttaatttttattataaccttaccaaataaggcaattattttggtttgttccgccat 610 Query: 233 cccacccaatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgt 292 ||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||| Sbjct: 609 cccacccaatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctgt 550 Query: 293 cgttcccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaa 352 |||||||||| ||||||||| |||||||||||||||||||| ||| |||||||||||||| Sbjct: 549 cgttcccactacttctcctttaatggttaggtctgaatcccacaatggagcttccaaaaa 490 Query: 353 atttctttccgagttaattttctcagttttattaacccgggcggctctttattattgctt 412 |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| || Sbjct: 489 atttctttccgagtcaattttctcagttttattaacccgggccgctctttattattgttt 430 Query: 413 aaaatttgtagttcttctttcaagttacaatttttcattctctattagttttattatatt 472 |||||||| ||||| ||||||||||| |||| ||||||| ||| |||||||||||| Sbjct: 429 tcaatttgtatttcttgtttcaagttacgatttcgaattctctgttatttttattatatt 370 Query: 473 gatgctttttcacattgccttttatgatgtaattcatagaccatacacagnggaattcta 532 |||||||| ||||||||| ||||||||||||| |||||||||||||| | ||||| ||| Sbjct: 369 gatgctttatcacattgctttttatgatgtaactcatagaccatacatattggaatccta 310 Query: 533 tatcttatttatttcctcttccttctttctatcatccctccctttatccacatcccttta 592 |||||| ||| ||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 309 tatctttctta-ttcctcttctttctttctatcatccctccttttatccacatcccttta 251 Query: 593 gttttgcttcacaacctanaatcc 616 |||||||||||||||||| ||||| Sbjct: 250 gttttgcttcacaacctagaatcc 227
>gb|AF133471.1|AF133471 Glaziophyton mirabile ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1222 Score = 704 bits (355), Expect = 0.0 Identities = 559/624 (89%), Gaps = 17/624 (2%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||||| ||||||||||||| Sbjct: 864 aaagaagatctagaatatatctag-atgtgtgtgtctatttatctatattctatatttat 806 Query: 62 agataataatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgc 117 ||||| |||| || |||| ||||||| |||||||||| ||||||||||||||| Sbjct: 805 agata----tgtaatctttcttaaaaaaaaatctccttattttg-ctcttattgaatcgc 751 Query: 118 ggtaaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtctta 177 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 750 ggtaaagtattctaattcaataaggatttcgcgggcgaatatttactctttcctgtctta 691 Query: 178 tttgttaatttata-----aacttaccaaataagacaannnnnnnggtttgttccgccat 232 |||||||||||||| | ||||||||||||| ||| ||||||||||||||| Sbjct: 690 tttgttaatttatattataaccttaccaaataaggcaatttttttggtttgttccgccat 631 Query: 233 cccacccaatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgt 292 ||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||| Sbjct: 630 cccacccaatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctgt 571 Query: 293 cgttcccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaa 352 |||||||||| ||||||||| ||||||||||||| ||| || ||| |||||||||||||| Sbjct: 570 cgttcccactacttctcctttaatggttaggtcttaattccacaatggagcttccaaaaa 511 Query: 353 atttctttccgagttaattttctcagttttattaacccgggcggctctttattattgctt 412 |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 510 atttctttccgagtcaattttctcagttttattaacccgggccgctctttattattgctt 451 Query: 413 aaaatttgtagttcttctttcaagttacaatttttcattctctattagttttattatatt 472 |||||||||| ||||| |||| |||||| | ||| ||||||| ||| ||||||||| || Sbjct: 450 aaaatttgtatttcttgtttcgagttacga-tttcaattctctgttatttttattatttt 392 Query: 473 gatgctttttcacattgccttttatgatgtaattcatagaccatacacagnggaattcta 532 |||||||| |||||||||||||||||||||||||||||||||||||| | ||||| ||| Sbjct: 391 gatgctttatcacattgccttttatgatgtaattcatagaccatacatattggaatccta 332 Query: 533 tatcttatttatttcctcttccttctttctatcatccctccctttatccacatcccttta 592 |||||| ||| ||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 331 tatctttctta-ttcctcttctttctttctatcatccctccttttatccacatcccttta 273 Query: 593 gttttgcttcacaacctanaatcc 616 |||||||||||||||||| ||||| Sbjct: 272 gttttgcttcacaacctagaatcc 249
>gb|AF133470.1|AF133470 Bambusa longispiculata ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1206 Score = 704 bits (355), Expect = 0.0 Identities = 558/624 (89%), Gaps = 16/624 (2%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||||| ||||||||||||| Sbjct: 862 aaagaagatctagaatatatctag-atgtgtgtgtctatttatctatattctatatttat 804 Query: 62 agataataatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgc 117 ||||| ||| || |||| ||||||| |||||||||| |||||||||||||||| Sbjct: 803 ggataa----gtaatctttcttaacaaaaaatctccttatttt-actcttattgaatcgc 749 Query: 118 ggtaaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtctta 177 ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 748 ggttaagtattctaattcaataaagatttcgcgggcgaatatttactctttcctgtctta 689 Query: 178 tttgttaatttata-----aacttaccaaataagacaannnnnnnggtttgttccgccat 232 |||||||||||||| | ||||||||||||||||| ||||||||||||||| Sbjct: 688 tttgttaatttatattataaccttaccaaataagacaatttttttggtttgttccgccat 629 Query: 233 cccacccaatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgt 292 ||||||||||||||| ||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 628 cccacccaatgaagtattaggattcttttcaattaaatcctatgcagtcataggttctgt 569 Query: 293 cgttcccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaa 352 |||||||||| ||||||||| |||||||||||||||||||| ||| |||||||||||||| Sbjct: 568 cgttcccactacttctcctttaatggttaggtctgaatcccacaatggagcttccaaaaa 509 Query: 353 atttctttccgagttaattttctcagttttattaacccgggcggctctttattattgctt 412 |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| || Sbjct: 508 atttctttccgagtcaattttctcagttttattaacccgggccgctctttattattgttt 449 Query: 413 aaaatttgtagttcttctttcaagttacaatttttcattctctattagttttattatatt 472 ||||||||| ||||| ||||||||||| |||| ||||||| ||| |||||||||||| Sbjct: 448 taaatttgtatttcttgtttcaagttacgatttcgaattctctgttatttttattatatt 389 Query: 473 gatgctttttcacattgccttttatgatgtaattcatagaccatacacagnggaattcta 532 |||||||| ||||||||||||||||||||||| |||||||||||||| | ||||| ||| Sbjct: 388 gatgctttatcacattgccttttatgatgtaactcatagaccatacatattggaatccta 329 Query: 533 tatcttatttatttcctcttccttctttctatcatccctccctttatccacatcccttta 592 |||||| ||| ||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 328 tatctttctta-ttcctcttctttctttctatcatccctccttttatccacatcccttta 270 Query: 593 gttttgcttcacaacctanaatcc 616 |||||||||||||||||| ||||| Sbjct: 269 gttttgcttcacaacctagaatcc 246
>gb|U54748.1|GMU54748 Glaziophyton mirabile ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1068 Score = 704 bits (355), Expect = 0.0 Identities = 559/624 (89%), Gaps = 17/624 (2%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||||| ||||||||||||| Sbjct: 841 aaagaagatctagaatatatctag-atgtgtgtgtctatttatctatattctatatttat 783 Query: 62 agataataatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgc 117 ||||| |||| || |||| ||||||| |||||||||| ||||||||||||||| Sbjct: 782 agata----tgtaatctttcttaaaaaaaaatctccttattttg-ctcttattgaatcgc 728 Query: 118 ggtaaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtctta 177 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 727 ggtaaagtattctaattcaataaggatttcgcgggcgaatatttactctttcctgtctta 668 Query: 178 tttgttaatttata-----aacttaccaaataagacaannnnnnnggtttgttccgccat 232 |||||||||||||| | ||||||||||||| ||| ||||||||||||||| Sbjct: 667 tttgttaatttatattataaccttaccaaataaggcaatttttttggtttgttccgccat 608 Query: 233 cccacccaatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgt 292 ||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||| Sbjct: 607 cccacccaatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctgt 548 Query: 293 cgttcccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaa 352 |||||||||| ||||||||| ||||||||||||| ||| || ||| |||||||||||||| Sbjct: 547 cgttcccactacttctcctttaatggttaggtcttaattccacaatggagcttccaaaaa 488 Query: 353 atttctttccgagttaattttctcagttttattaacccgggcggctctttattattgctt 412 |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 487 atttctttccgagtcaattttctcagttttattaacccgggccgctctttattattgctt 428 Query: 413 aaaatttgtagttcttctttcaagttacaatttttcattctctattagttttattatatt 472 |||||||||| ||||| |||| |||||| | ||| ||||||| ||| ||||||||| || Sbjct: 427 aaaatttgtatttcttgtttcgagttacga-tttcaattctctgttatttttattatttt 369 Query: 473 gatgctttttcacattgccttttatgatgtaattcatagaccatacacagnggaattcta 532 |||||||| |||||||||||||||||||||||||||||||||||||| | ||||| ||| Sbjct: 368 gatgctttatcacattgccttttatgatgtaattcatagaccatacatattggaatccta 309 Query: 533 tatcttatttatttcctcttccttctttctatcatccctccctttatccacatcccttta 592 |||||| ||| ||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 308 tatctttctta-ttcctcttctttctttctatcatccctccttttatccacatcccttta 250 Query: 593 gttttgcttcacaacctanaatcc 616 |||||||||||||||||| ||||| Sbjct: 249 gttttgcttcacaacctagaatcc 226
>gb|U54745.1|BLU54745 Bambusa longispiculata ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1065 Score = 704 bits (355), Expect = 0.0 Identities = 558/624 (89%), Gaps = 16/624 (2%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||||| ||||||||||||| Sbjct: 839 aaagaagatctagaatatatctag-atgtgtgtgtctatttatctatattctatatttat 781 Query: 62 agataataatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgc 117 ||||| ||| || |||| ||||||| |||||||||| |||||||||||||||| Sbjct: 780 ggataa----gtaatctttcttaacaaaaaatctccttatttt-actcttattgaatcgc 726 Query: 118 ggtaaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtctta 177 ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 725 ggttaagtattctaattcaataaagatttcgcgggcgaatatttactctttcctgtctta 666 Query: 178 tttgttaatttata-----aacttaccaaataagacaannnnnnnggtttgttccgccat 232 |||||||||||||| | ||||||||||||||||| ||||||||||||||| Sbjct: 665 tttgttaatttatattataaccttaccaaataagacaatttttttggtttgttccgccat 606 Query: 233 cccacccaatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgt 292 ||||||||||||||| ||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 605 cccacccaatgaagtattaggattcttttcaattaaatcctatgcagtcataggttctgt 546 Query: 293 cgttcccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaa 352 |||||||||| ||||||||| |||||||||||||||||||| ||| |||||||||||||| Sbjct: 545 cgttcccactacttctcctttaatggttaggtctgaatcccacaatggagcttccaaaaa 486 Query: 353 atttctttccgagttaattttctcagttttattaacccgggcggctctttattattgctt 412 |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| || Sbjct: 485 atttctttccgagtcaattttctcagttttattaacccgggccgctctttattattgttt 426 Query: 413 aaaatttgtagttcttctttcaagttacaatttttcattctctattagttttattatatt 472 ||||||||| ||||| ||||||||||| |||| ||||||| ||| |||||||||||| Sbjct: 425 taaatttgtatttcttgtttcaagttacgatttcgaattctctgttatttttattatatt 366 Query: 473 gatgctttttcacattgccttttatgatgtaattcatagaccatacacagnggaattcta 532 |||||||| ||||||||||||||||||||||| |||||||||||||| | ||||| ||| Sbjct: 365 gatgctttatcacattgccttttatgatgtaactcatagaccatacatattggaatccta 306 Query: 533 tatcttatttatttcctcttccttctttctatcatccctccctttatccacatcccttta 592 |||||| ||| ||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 305 tatctttctta-ttcctcttctttctttctatcatccctccttttatccacatcccttta 247 Query: 593 gttttgcttcacaacctanaatcc 616 |||||||||||||||||| ||||| Sbjct: 246 gttttgcttcacaacctagaatcc 223
>gb|AF133465.1|AF133465 Arundinaria gigantea ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1225 Score = 702 bits (354), Expect = 0.0 Identities = 558/624 (89%), Gaps = 15/624 (2%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||||| ||||||||||||| Sbjct: 867 aaagaagatctagaatatatctag-atgtgtgtgtctatttatctatattctatatttat 809 Query: 62 agataataatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgc 117 ||||||| ||| || |||| ||||||| ||||||||| |||||||||||||||| Sbjct: 808 agataat---gtaatctttcttaaaaaaaaatctccttatttg-actcttattgaatcgc 753 Query: 118 ggtaaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtctta 177 || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 752 gggaaagtattctaattcaataaagatttcgcgggcgaatatttactctttcctgtctta 693 Query: 178 tttgttaatttataaacttaccaaataagacaannnnnnnggtttgttccgccatcccac 237 ||||||||||||||| ||||||||||||| ||| |||||||||||||||||||| Sbjct: 692 tttgttaatttataaccttaccaaataaggcaatttttttggtttgttccgccatcccac 633 Query: 238 ccaatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttc 297 |||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 632 ccaatgaagtcttaggattcttttcaataaaatcctatgcagtcataggttctgtcgttc 573 Query: 298 ccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttc 357 ||||| ||||||||| |||||||||||||||||||||||| ||||||| | ||||||||| Sbjct: 572 ccactacttctcctttaatggttaggtctgaatcccgcaatggagctttccaaaaatttc 513 Query: 358 tttccgagttaattttctcagttttattaacccgggcggctc-----tttattattgctt 412 ||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 512 tttccgagtcaattttctcagttttattaacccgggccgctctttattttattattgctt 453 Query: 413 aaaatttgtagttcttctttcaagttacaatttttcattctctattagttttattatatt 472 ||||||| || || || ||||||||||| |||| ||||||| ||| |||||||||||| Sbjct: 452 aaaatttctattttttgtttcaagttacgatttcgaattctctgttatttttattatatt 393 Query: 473 gatgctttttcacattgccttttatgatgtaattcatagaccatacacagnggaattcta 532 |||||||| ||||||||||||||||||||||| |||||||||||||| | ||||| ||| Sbjct: 392 gatgctttatcacattgccttttatgatgtaactcatagaccatacatattggaatccta 333 Query: 533 tatcttatttatttcctcttccttctttctatcatccctccctttatccacatcccttta 592 |||||| ||| ||| ||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 332 tatctttctta-ttcttcttccttctttctatcatccctccttttatccacatcccttta 274 Query: 593 gttttgcttcacaacctanaatcc 616 |||||||||||||||||| ||||| Sbjct: 273 gttttgcttcacaacctagaatcc 250
>gb|U54742.1|AGU54742 Arundinaria gigantea ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1065 Score = 702 bits (354), Expect = 0.0 Identities = 558/624 (89%), Gaps = 15/624 (2%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||||| ||||||||||||| Sbjct: 844 aaagaagatctagaatatatctag-atgtgtgtgtctatttatctatattctatatttat 786 Query: 62 agataataatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgc 117 ||||||| ||| || |||| ||||||| ||||||||| |||||||||||||||| Sbjct: 785 agataat---gtaatctttcttaaaaaaaaatctccttatttg-actcttattgaatcgc 730 Query: 118 ggtaaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtctta 177 || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 729 gggaaagtattctaattcaataaagatttcgcgggcgaatatttactctttcctgtctta 670 Query: 178 tttgttaatttataaacttaccaaataagacaannnnnnnggtttgttccgccatcccac 237 ||||||||||||||| ||||||||||||| ||| |||||||||||||||||||| Sbjct: 669 tttgttaatttataaccttaccaaataaggcaatttttttggtttgttccgccatcccac 610 Query: 238 ccaatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttc 297 |||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 609 ccaatgaagtcttaggattcttttcaataaaatcctatgcagtcataggttctgtcgttc 550 Query: 298 ccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttc 357 ||||| ||||||||| |||||||||||||||||||||||| ||||||| | ||||||||| Sbjct: 549 ccactacttctcctttaatggttaggtctgaatcccgcaatggagctttccaaaaatttc 490 Query: 358 tttccgagttaattttctcagttttattaacccgggcggctc-----tttattattgctt 412 ||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 489 tttccgagtcaattttctcagttttattaacccgggccgctctttattttattattgctt 430 Query: 413 aaaatttgtagttcttctttcaagttacaatttttcattctctattagttttattatatt 472 ||||||| || || || ||||||||||| |||| ||||||| ||| |||||||||||| Sbjct: 429 aaaatttctattttttgtttcaagttacgatttcgaattctctgttatttttattatatt 370 Query: 473 gatgctttttcacattgccttttatgatgtaattcatagaccatacacagnggaattcta 532 |||||||| ||||||||||||||||||||||| |||||||||||||| | ||||| ||| Sbjct: 369 gatgctttatcacattgccttttatgatgtaactcatagaccatacatattggaatccta 310 Query: 533 tatcttatttatttcctcttccttctttctatcatccctccctttatccacatcccttta 592 |||||| ||| ||| ||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 309 tatctttctta-ttcttcttccttctttctatcatccctccttttatccacatcccttta 251 Query: 593 gttttgcttcacaacctanaatcc 616 |||||||||||||||||| ||||| Sbjct: 250 gttttgcttcacaacctagaatcc 227
>gb|AY912200.1| Schizostachyum brachycladum ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1227 Score = 698 bits (352), Expect = 0.0 Identities = 557/624 (89%), Gaps = 12/624 (1%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||||| ||||||||| ||| Sbjct: 848 aaagaagatctagaatatatctag-atgtgtgtgtctatttatctatattctatatatat 790 Query: 62 agataataatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgc 117 | | | ||||||| || |||| ||||||| ||||||||||||||||||||||||||| Sbjct: 789 ataga-taatgtaatctttcttaacaaaaaatctccttatttttactcttattgaatcgc 731 Query: 118 ggtaaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtctta 177 ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 730 ggtaaagtattttaattcaataaagatttcgcgggcgaatatttactctttcctgtctta 671 Query: 178 tttgttaatttata-----aacttaccaaataagacaannnnnnnggtttgttccgccat 232 |||| ||||||||| | ||||||||||||| ||| || |||||||||||| Sbjct: 670 tttgctaatttatattataaccttaccaaataaggcaatttttttgggttgttccgccat 611 Query: 233 cccacccaatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgt 292 ||||||||||||||| ||| |||||||||||||||||||||||| | ||||||||||||| Sbjct: 610 cccacccaatgaagtattatgattcttttcaataaaatcctatgcagtcataggttctgt 551 Query: 293 cgttcccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaa 352 |||||||||| ||||||||| |||||||||||||||||||| ||| |||||||||||||| Sbjct: 550 cgttcccactacttctcctttaatggttaggtctgaatcccacaatggagcttccaaaaa 491 Query: 353 atttctttccgagttaattttctcagttttattaacccgggcggctctttattattgctt 412 |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| || Sbjct: 490 atttctttccgagtcaattttctcagttttattaacccgggccgctctttattattgttt 431 Query: 413 aaaatttgtagttcttctttcaagttacaatttttcattctctattagttttattatatt 472 ||||||||| ||||| ||||||||||| |||| ||||||| ||| |||||||||||| Sbjct: 430 taaatttgtatttcttgtttcaagttacgatttcgaattctctgttatttttattatatt 371 Query: 473 gatgctttttcacattgccttttatgatgtaattcatagaccatacacagnggaattcta 532 |||||||| ||||||||||||||||||||||| |||||||||||||| | ||||| ||| Sbjct: 370 gatgctttatcacattgccttttatgatgtaactcatagaccatacatattggaatccta 311 Query: 533 tatcttatttatttcctcttccttctttctatcatccctccctttatccacatcccttta 592 |||||| ||| ||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 310 tatctttctta-ttcctcttctttctttctatcatccctccttttatccacatcccttta 252 Query: 593 gttttgcttcacaacctanaatcc 616 |||||||||||||||||| ||||| Sbjct: 251 gttttgcttcacaacctagaatcc 228
>gb|AY912214.1| Temburongia simplex ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1075 Score = 696 bits (351), Expect = 0.0 Identities = 556/624 (89%), Gaps = 14/624 (2%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||||| ||||||||||||| Sbjct: 745 aaagaagatctagaatatatctag-atgtgtgtgtctatttatctatattctatatttat 687 Query: 62 agataataatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgc 117 ||||||| ||| || |||| ||||||| |||||| |||||||||||||||||||| Sbjct: 686 agataat---gtaatctttcttaacaaaaaatctccttaattttactcttattgaatcgc 630 Query: 118 ggtaaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtctta 177 ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| Sbjct: 629 ggtaaagtattctaattcaataaagatttcgcgggcgaataattactctttcctgtctta 570 Query: 178 tttgttaatttata-----aacttaccaaataagacaannnnnnnggtttgttccgccat 232 |||||||||||||| | ||||||||||||| || ||||||||||||||| Sbjct: 569 tttgttaatttatattataaccttaccaaataaggaaatttttttggtttgttccgccat 510 Query: 233 cccacccaatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgt 292 ||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||| Sbjct: 509 cccacccaatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctgt 450 Query: 293 cgttcccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaa 352 |||||||||| ||||||||| ||||||||||||||||| || ||| |||||||||||||| Sbjct: 449 cgttcccactacttctcctttaatggttaggtctgaattccacaatggagcttccaaaaa 390 Query: 353 atttctttccgagttaattttctcagttttattaacccgggcggctctttattattgctt 412 |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| || Sbjct: 389 atttctttccgagtcaattttctcagttttattaacccgggccgctctttattattgttt 330 Query: 413 aaaatttgtagttcttctttcaagttacaatttttcattctctattagttttattatatt 472 |||||||||| ||||| ||||||||||| |||| ||||||| ||| ||||||||||| Sbjct: 329 aaaatttgtatttcttgtttcaagttacgatttcgaattctctgttatttttattatatg 270 Query: 473 gatgctttttcacattgccttttatgatgtaattcatagaccatacacagnggaattcta 532 |||||||| ||||||||||||||||||||||| |||||||||||||| | ||||| ||| Sbjct: 269 gatgctttatcacattgccttttatgatgtaactcatagaccatacatattggaatccta 210 Query: 533 tatcttatttatttcctcttccttctttctatcatccctccctttatccacatcccttta 592 |||||| ||| ||||| | | ||||||||||||||||||| |||||||||||||||||| Sbjct: 209 tatctttctta-ttcctttnctttctttctatcatccctccttttatccacatcccttta 151 Query: 593 gttttgcttcacaacctanaatcc 616 |||||||||||||||||| ||||| Sbjct: 150 gttttgcttcacaacctagaatcc 127
>gb|AF133466.1|AF133466 Pseudosasa japonica ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1225 Score = 696 bits (351), Expect = 0.0 Identities = 557/624 (89%), Gaps = 15/624 (2%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||||| ||||||||||||| Sbjct: 867 aaagaagatctagaatatatctag-atgtgtgtgtctatttatctatattctatatttat 809 Query: 62 agataataatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgc 117 ||||||| ||| || |||| ||||||| ||||||||| |||||||||||||||| Sbjct: 808 agataat---gtaatctttcttaaaaaaaaatctccttatttg-actcttattgaatcgc 753 Query: 118 ggtaaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtctta 177 || |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 752 gggaaagtantctaattcaataaagatttcgcgggcgaatatttactctttcctgtctta 693 Query: 178 tttgttaatttataaacttaccaaataagacaannnnnnnggtttgttccgccatcccac 237 ||||||||||||||| ||||||||||||| ||| |||||||||||||||||||| Sbjct: 692 tttgttaatttataaccttaccaaataaggcaatttttttggtttgttccgccatcccac 633 Query: 238 ccaatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttc 297 |||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 632 ccaatgaagtcttaggattcttttcaataaaatcctatgcagtcataggttctgtcgttc 573 Query: 298 ccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttc 357 ||||| ||||||||| |||||||||||||||||||||||| ||||||| | ||||||||| Sbjct: 572 ccactacttctcctttaatggttaggtctgaatcccgcaatggagctttccaaaaatttc 513 Query: 358 tttccgagttaattttctcagttttattaacccgggcggctc-----tttattattgctt 412 ||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 512 tttccgagtcaattttctcagttttattaacccgggccgctctttattttattattgctt 453 Query: 413 aaaatttgtagttcttctttcaagttacaatttttcattctctattagttttattatatt 472 ||||||| || || || ||||||||||| |||| ||||||| ||| |||||||||||| Sbjct: 452 aaaatttctattttttgtttcaagttacgatttcgaattctctgttatttttattatatt 393 Query: 473 gatgctttttcacattgccttttatgatgtaattcatagaccatacacagnggaattcta 532 |||||||| ||||||||||||||||||||||| |||||||||||||| | ||||| ||| Sbjct: 392 gatgctttatcacattgccttttatgatgtaactcatagaccatacatattggaatccta 333 Query: 533 tatcttatttatttcctcttccttctttctatcatccctccctttatccacatcccttta 592 |||||| ||| ||| ||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 332 tatctttctta-ttcttcttccttctttctatcatccctccttttatccacatcccttta 274 Query: 593 gttttgcttcacaacctanaatcc 616 |||||||||||||||||| ||||| Sbjct: 273 gttttgcttcacaacctagaatcc 250
>gb|U54743.1|PJU54743 Pseudosasa japonica ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1065 Score = 696 bits (351), Expect = 0.0 Identities = 557/624 (89%), Gaps = 15/624 (2%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||||| ||||||||||||| Sbjct: 844 aaagaagatctagaatatatctag-atgtgtgtgtctatttatctatattctatatttat 786 Query: 62 agataataatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgc 117 ||||||| ||| || |||| ||||||| ||||||||| |||||||||||||||| Sbjct: 785 agataat---gtaatctttcttaaaaaaaaatctccttatttg-actcttattgaatcgc 730 Query: 118 ggtaaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtctta 177 || |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 729 gggaaagtantctaattcaataaagatttcgcgggcgaatatttactctttcctgtctta 670 Query: 178 tttgttaatttataaacttaccaaataagacaannnnnnnggtttgttccgccatcccac 237 ||||||||||||||| ||||||||||||| ||| |||||||||||||||||||| Sbjct: 669 tttgttaatttataaccttaccaaataaggcaatttttttggtttgttccgccatcccac 610 Query: 238 ccaatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttc 297 |||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 609 ccaatgaagtcttaggattcttttcaataaaatcctatgcagtcataggttctgtcgttc 550 Query: 298 ccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttc 357 ||||| ||||||||| |||||||||||||||||||||||| ||||||| | ||||||||| Sbjct: 549 ccactacttctcctttaatggttaggtctgaatcccgcaatggagctttccaaaaatttc 490 Query: 358 tttccgagttaattttctcagttttattaacccgggcggctc-----tttattattgctt 412 ||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 489 tttccgagtcaattttctcagttttattaacccgggccgctctttattttattattgctt 430 Query: 413 aaaatttgtagttcttctttcaagttacaatttttcattctctattagttttattatatt 472 ||||||| || || || ||||||||||| |||| ||||||| ||| |||||||||||| Sbjct: 429 aaaatttctattttttgtttcaagttacgatttcgaattctctgttatttttattatatt 370 Query: 473 gatgctttttcacattgccttttatgatgtaattcatagaccatacacagnggaattcta 532 |||||||| ||||||||||||||||||||||| |||||||||||||| | ||||| ||| Sbjct: 369 gatgctttatcacattgccttttatgatgtaactcatagaccatacatattggaatccta 310 Query: 533 tatcttatttatttcctcttccttctttctatcatccctccctttatccacatcccttta 592 |||||| ||| ||| ||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 309 tatctttctta-ttcttcttccttctttctatcatccctccttttatccacatcccttta 251 Query: 593 gttttgcttcacaacctanaatcc 616 |||||||||||||||||| ||||| Sbjct: 250 gttttgcttcacaacctagaatcc 227
>gb|AY912190.1| Atractantha radiata ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1175 Score = 692 bits (349), Expect = 0.0 Identities = 561/631 (88%), Gaps = 24/631 (3%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||||| ||||||||||||| Sbjct: 854 aaagaagatctagaatatatctag-atgtgtgtgtctatttatctatattctatatttat 796 Query: 62 agataataatgtagtccttct-------aaaaaatatccttatttttactcttattg--- 111 ||||| ||||| || |||| ||||||| ||||||||||||||||||||| Sbjct: 795 agata---atgtaatctttcttaaaaaaaaaaaatctccttatttttactcttattgtat 739 Query: 112 --aatcgcggtaaagtattctaattcaataagaatttcgcgggcgaatatttactctttc 169 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 738 tgaatcgcggtaaagtattctaattcaataa--atttcgcgggcgaatatttactctttc 681 Query: 170 ctgtcttatttgttaatttata-----aacttaccaaataagacaannnnnnnggtttgt 224 |||||||||||||||||||||| | ||||||||||||| ||| ||||||| Sbjct: 680 ctgtcttatttgttaatttatattataaccttaccaaataaggcaatttttttggtttgt 621 Query: 225 tccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatcata 284 ||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||| Sbjct: 620 tccgccatcccacccaatgaagtattaggattcttttcaataaaatcctatgcagtcata 561 Query: 285 ggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacggagct 344 |||||||||||||||||| ||||||||| ||||||||||||||||| || ||| |||||| Sbjct: 560 ggttctgtcgttcccactacttctcctttaatggttaggtctgaattccacaatggagct 501 Query: 345 tccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctctttat 404 |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| Sbjct: 500 tccaaaaaatttctttccgagtcaattttctcagttttattaacccgggccgctctttat 441 Query: 405 tattgcttaaaatttgtagttcttctttcaagttacaatttttcattctctattagtttt 464 | |||||||||||||||| ||||| |||| |||||| |||| ||||||| ||| |||| Sbjct: 440 tcttgcttaaaatttgtatttcttgtttcgagttacgatttcgaattctctgttattttt 381 Query: 465 attatattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagng 524 |||||||||||||||| |||||||||||||||||||||||||||||||||||||| | | Sbjct: 380 attatattgatgctttatcacattgccttttatgatgtaattcatagaccatacatattg 321 Query: 525 gaattctatatcttatttatttcctcttccttctttctatcatccctccctttatccaca 584 |||| ||||||||| ||| ||||||||| ||||||||||||||||||| |||||||||| Sbjct: 320 gaatcctatatctttctta-ttcctcttctttctttctatcatccctccttttatccaca 262 Query: 585 tccctttagttttgcttcacaacctanaatc 615 |||||||||||||||||||||||||| |||| Sbjct: 261 tccctttagttttgcttcacaacctagaatc 231
>gb|AF133487.1|AF133487 Puelia olyriformis ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1217 Score = 690 bits (348), Expect = 0.0 Identities = 483/531 (90%), Gaps = 5/531 (0%) Strand = Plus / Minus Query: 91 tccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcg 150 ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| Sbjct: 776 tccttatttttactcttattgaatcgcggtaaagtattctaatccaataaagatttcgcg 717 Query: 151 ggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaa 210 ||||||||||||||||||||||||||||||||||||| |||| |||||||||||| | | Sbjct: 716 ggcgaatatttactctttcctgtcttatttgttaattcataaccttaccaaataaagcta 657 Query: 211 nnnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 656 tttttttggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaat 597 Query: 271 cctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaat 330 |||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 596 cctatgcagtcataggttctgtcgttcccactgcttctcctttaatggttaggtctgaat 537 Query: 331 cccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaaccc 390 ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 536 cccgcaatggagcttccaaaaaatttctttccgagtcaattttctcagttttattaaccc 477 Query: 391 gggcggctctttattattgcttaaaatttgtagttcttctttcaagttacaatttttcat 450 |||| ||||||||||||||||| |||||| || ||||| ||||||||||| |||| || Sbjct: 476 gggccgctctttattattgctttaaatttttatttcttgtttcaagttacgatttcgaat 417 Query: 451 tctctattagttttattatattgatgctttttcacattgccttttatgatgtaattcata 510 |||| ||| |||||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 416 tctcagttatttttattatattgatgctttatcacattgccttttatgatataattcata 357 Query: 511 gaccatacacagnggaattctatatcttatttat-----ttcctcttccttctttctatc 565 ||||||||| | ||||| ||||||||| |||| ||||||||||||||||||||| Sbjct: 356 gaccatacatattggaatcctatatctttcttattcctcttcctcttccttctttctatc 297 Query: 566 atccctccctttatccacatccctttagttttgcttcacaacctanaatcc 616 |||||||| |||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 296 atccctccttttatccacatccctttatttttgcttcacaacctagaatcc 246 Score = 52.0 bits (26), Expect = 0.002 Identities = 42/46 (91%), Gaps = 1/46 (2%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatcta 47 ||||||||||||||||||||| || ||||||||| |||||||||| Sbjct: 863 aaagaagatctagaatatatctag-atgtgtgtgtctatttatcta 819
>gb|AY912191.1| Aulonemia patula ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1186 Score = 686 bits (346), Expect = 0.0 Identities = 554/623 (88%), Gaps = 14/623 (2%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || |||||||||| |||||||||| ||||||||||||| Sbjct: 815 aaagaagatctagaatatatctag-atgtgtgtggctatttatctatattctatatttat 757 Query: 62 agataataatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgc 117 ||||||| ||| || |||| ||||||| ||||||||||||||||||||||||||| Sbjct: 756 agataat---gtaatctttcttaaaaaaaaatctccttatttttactcttattgaatcgc 700 Query: 118 ggtaaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtctta 177 || |||| ||||||||||||||| |||||||||||||||||||||||||||||| |||| Sbjct: 699 gggaaagaattctaattcaataaagatttcgcgggcgaatatttactctttcctgcctta 640 Query: 178 tttgttaatttata-----aacttaccaaataagacaannnnnnnggtttgttccgccat 232 |||| ||||||||| | ||||||||||||| ||| || |||||||||||| Sbjct: 639 tttgctaatttatattataaccttaccaaataaggcaatttttttggnttgttccgccat 580 Query: 233 cccacccaatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgt 292 ||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||| Sbjct: 579 cccacccaatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctgt 520 Query: 293 cgttcccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaa 352 |||||||||| |||||| || ||||||||||||||||| || ||| |||||||||||||| Sbjct: 519 cgttcccactacttctcttttaatggttaggtctgaattccacaatggagcttccaaaaa 460 Query: 353 atttctttccgagttaattttctcagttttattaacccgggcggctctttattattgctt 412 |||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 459 gtttctttccgagccaattttctcagttttcttaacccgggccgctctttattattgctt 400 Query: 413 aaaatttgtagttcttctttcaagttacaatttttcattctctattagttttattatatt 472 |||||||||| ||||| |||| |||||| |||| ||||||| ||| |||||||||||| Sbjct: 399 aaaatttgtatttcttgtttcgagttacgatttcgaattctctgttatttttattatatt 340 Query: 473 gatgctttttcacattgccttttatgatgtaattcatagaccatacacagnggaattcta 532 |||||||| |||||||||||||||||||||||||||||||||||||| | ||||| ||| Sbjct: 339 gatgctttatcacattgccttttatgatgtaattcatagaccatacatattggaatccta 280 Query: 533 tatcttatttatttcctcttccttctttctatcatccctccctttatccacatcccttta 592 |||||| ||| ||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 279 tatctttctta-ttcctcttctttctttctatcatccctccttttatccacatcccttta 221 Query: 593 gttttgcttcacaacctanaatc 615 |||||||||||||||||| |||| Sbjct: 220 gttttgcttcacaacctagaatc 198
>gb|AF133467.1|AF133467 Phyllostachys pubescens ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1232 Score = 686 bits (346), Expect = 0.0 Identities = 556/624 (89%), Gaps = 15/624 (2%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||||| ||||||||||||| Sbjct: 867 aaagaagatctagaatatatctag-atgtgtgtgtctatttatctatattctatatttat 809 Query: 62 agataataatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgc 117 ||||||| ||| || |||| ||||||| |||||||| |||||||||||||||| Sbjct: 808 agataat---gtaatctttcttaaaaaaaaatctccttattcg-actcttattgaatcgc 753 Query: 118 ggtaaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtctta 177 || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 752 gggaaagtattctaattcaataaagatttcgcgggcgaatatttactctttcctgtctta 693 Query: 178 tttgttaatttataaacttaccaaataagacaannnnnnnggtttgttccgccatcccac 237 ||||||||||||||| ||||||||||||| ||| |||||||||||||||||||| Sbjct: 692 tttgttaatttataaccttaccaaataaggcaatttttttggtttgttccgccatcccac 633 Query: 238 ccaatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttc 297 |||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 632 ccaatgaagtcttaggattcttttcaataaaatcctatgcagtcataggttctgtcgttc 573 Query: 298 ccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttc 357 ||||| ||||||||| |||||||||||||||||||| ||| ||||||| | ||||||||| Sbjct: 572 ccactacttctcctttaatggttaggtctgaatcccacaatggagctttccaaaaatttc 513 Query: 358 tttccgagttaattttctcagttttattaacccgggcggctc-----tttattattgctt 412 ||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 512 tttccgagtcaattttctcagttttattaacccgggccgctctttattttattattgctt 453 Query: 413 aaaatttgtagttcttctttcaagttacaatttttcattctctattagttttattatatt 472 ||||||| || || || ||||||||||| |||| ||||||| ||| |||||||||||| Sbjct: 452 aaaatttctattttttgtttcaagttacgatttcgaattctctgttatttttattatatt 393 Query: 473 gatgctttttcacattgccttttatgatgtaattcatagaccatacacagnggaattcta 532 |||||||| ||||||||||||||||||||||| |||||||||||||| | ||||| ||| Sbjct: 392 gatgctttatcacattgccttttatgatgtaactcatagaccatacatattggaatccta 333 Query: 533 tatcttatttatttcctcttccttctttctatcatccctccctttatccacatcccttta 592 |||||| ||| ||| ||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 332 tatctttctta-ttcttcttccttctttctatcatccctccttttatccacatcccttta 274 Query: 593 gttttgcttcacaacctanaatcc 616 |||||||||||||||||| ||||| Sbjct: 273 gttttgcttcacaacctagaatcc 250
>gb|AF133460.1|AF133460 Streptogyna americana ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1228 Score = 686 bits (346), Expect = 0.0 Identities = 467/509 (91%), Gaps = 1/509 (0%) Strand = Plus / Minus Query: 108 attgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaatatttactctt 167 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 757 attgaatcgcggtaaagtattctaattcaataaagatttcgcgggcgaatatttactctt 698 Query: 168 tcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnnggtttgttcc 227 |||||||||||||||||||| |||| ||||||||||||| ||| |||||||||| Sbjct: 697 tcctgtcttatttgttaattcataaccttaccaaataagccaatttttttggtttgttcc 638 Query: 228 gccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatcataggt 287 |||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||| Sbjct: 637 gccatcccacccaatgaagtattaggattcttttcaataaaatcctatgcagtcataggt 578 Query: 288 tctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttcc 347 ||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||| Sbjct: 577 tctgtcgttcccactgcttctcctttaatggttaggtttgaatcccgcaatggagcttcc 518 Query: 348 aaaaaatttctttccgagttaattttctcagttttattaacccgggcggctctttattat 407 ||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||| Sbjct: 517 aaaaaatttctttccgagtcaattttatcagttttattaacccgggccgctctttattat 458 Query: 408 tgcttaaaatttgtagttcttctttcaagttacaatttttcattctctattagttttatt 467 |||||||||||| || ||||| ||||||||||| |||| ||||||| ||| |||| || Sbjct: 457 tgcttaaaatttttatttcttgtttcaagttacgatttcgaattctctgttatttttttt 398 Query: 468 atattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagnggaa 527 ||||||||||||| |||||||||||||||||||||||||||||||||||||| | |||| Sbjct: 397 atattgatgctttatcacattgccttttatgatgtaattcatagaccatacatattggaa 338 Query: 528 ttctatatcttatttatttcctcttccttctttctatcatccctccctttatccacatcc 587 | ||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 337 tcctatatctttctta-ttcctcttccttctttctatcatccctccttttatccacatcc 279 Query: 588 ctttagttttgcttcacaacctanaatcc 616 |||||||||||||||||||| || ||||| Sbjct: 278 ctttagttttgcttcacaacttagaatcc 250 Score = 61.9 bits (31), Expect = 2e-06 Identities = 53/59 (89%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 |||||||||||||||||| || || ||||||||| |||||||||| |||||||||||| Sbjct: 870 aaagaagatctagaatatgtctag-atgtgtgtgtttatttatctatattctatattta 813
>gb|U54744.1|PPU54744 Phyllostachys pubescens ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1072 Score = 686 bits (346), Expect = 0.0 Identities = 556/624 (89%), Gaps = 15/624 (2%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||||| ||||||||||||| Sbjct: 844 aaagaagatctagaatatatctag-atgtgtgtgtctatttatctatattctatatttat 786 Query: 62 agataataatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgc 117 ||||||| ||| || |||| ||||||| |||||||| |||||||||||||||| Sbjct: 785 agataat---gtaatctttcttaaaaaaaaatctccttattcg-actcttattgaatcgc 730 Query: 118 ggtaaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtctta 177 || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 729 gggaaagtattctaattcaataaagatttcgcgggcgaatatttactctttcctgtctta 670 Query: 178 tttgttaatttataaacttaccaaataagacaannnnnnnggtttgttccgccatcccac 237 ||||||||||||||| ||||||||||||| ||| |||||||||||||||||||| Sbjct: 669 tttgttaatttataaccttaccaaataaggcaatttttttggtttgttccgccatcccac 610 Query: 238 ccaatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttc 297 |||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 609 ccaatgaagtcttaggattcttttcaataaaatcctatgcagtcataggttctgtcgttc 550 Query: 298 ccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttc 357 ||||| ||||||||| |||||||||||||||||||| ||| ||||||| | ||||||||| Sbjct: 549 ccactacttctcctttaatggttaggtctgaatcccacaatggagctttccaaaaatttc 490 Query: 358 tttccgagttaattttctcagttttattaacccgggcggctc-----tttattattgctt 412 ||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 489 tttccgagtcaattttctcagttttattaacccgggccgctctttattttattattgctt 430 Query: 413 aaaatttgtagttcttctttcaagttacaatttttcattctctattagttttattatatt 472 ||||||| || || || ||||||||||| |||| ||||||| ||| |||||||||||| Sbjct: 429 aaaatttctattttttgtttcaagttacgatttcgaattctctgttatttttattatatt 370 Query: 473 gatgctttttcacattgccttttatgatgtaattcatagaccatacacagnggaattcta 532 |||||||| ||||||||||||||||||||||| |||||||||||||| | ||||| ||| Sbjct: 369 gatgctttatcacattgccttttatgatgtaactcatagaccatacatattggaatccta 310 Query: 533 tatcttatttatttcctcttccttctttctatcatccctccctttatccacatcccttta 592 |||||| ||| ||| ||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 309 tatctttctta-ttcttcttccttctttctatcatccctccttttatccacatcccttta 251 Query: 593 gttttgcttcacaacctanaatcc 616 |||||||||||||||||| ||||| Sbjct: 250 gttttgcttcacaacctagaatcc 227
>gb|AY912209.1| Nastus elongatus ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1098 Score = 680 bits (343), Expect = 0.0 Identities = 554/624 (88%), Gaps = 20/624 (3%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||||| ||||||||||||| Sbjct: 721 aaagaagatctagaatatatctag-atgtgtgtgtctatttatctatattctatatttat 663 Query: 62 agataataatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgc 117 ||||||| ||| || |||| ||||||| | ||||||||||||||||||||||||| Sbjct: 662 agataat---gtaatctttcttaacaaaaaatcttcttatttttactcttattgaatcgc 606 Query: 118 ggtaaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtctta 177 ||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 605 ggtaaagtattctaa------aaagatttcgcgggcgaatatttactctttcctgtctta 552 Query: 178 tttgttaatttata-----aacttaccaaataagacaannnnnnnggtttgttccgccat 232 |||||||||||||| | ||||||||||||| ||| ||||||||||||||| Sbjct: 551 tttgttaatttatattataaccttaccaaataaggcaattattttggtttgttccgccat 492 Query: 233 cccacccaatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgt 292 ||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||| Sbjct: 491 cccacccaatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctgt 432 Query: 293 cgttcccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaa 352 |||||||||| ||||||||| |||||||||||||||||||| ||| |||||||||||||| Sbjct: 431 cgttcccactacttctcctttaatggttaggtctgaatcccacaatggagcttccaaaaa 372 Query: 353 atttctttccgagttaattttctcagttttattaacccgggcggctctttattattgctt 412 |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| || Sbjct: 371 atttctttccgagtcaattttctcagttttattaacccgggccgctctttattattgttt 312 Query: 413 aaaatttgtagttcttctttcaagttacaatttttcattctctattagttttattatatt 472 ||||||||| ||||| ||||||||||| |||| ||||||| ||| |||||||||||| Sbjct: 311 taaatttgtatttcttgtttcaagttacgatttcgaattctctgttatttttattatatt 252 Query: 473 gatgctttttcacattgccttttatgatgtaattcatagaccatacacagnggaattcta 532 |||||||| ||||||||| ||||||||||||| |||||||||||||| | ||||| ||| Sbjct: 251 gatgctttatcacattgctttttatgatgtaactcatagaccatacatattggaatccta 192 Query: 533 tatcttatttatttcctcttccttctttctatcatccctccctttatccacatcccttta 592 |||||| ||| ||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 191 tatctttctta-ttcctcttctttctttctatcatccctccttttatccacatcccttta 133 Query: 593 gttttgcttcacaacctanaatcc 616 |||||||||||||||||| ||||| Sbjct: 132 gttttgcttcacaacctagaatcc 109
>gb|AF133468.1|AF133468 Schizostachyum luzonicum ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1225 Score = 674 bits (340), Expect = 0.0 Identities = 556/625 (88%), Gaps = 17/625 (2%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||||| ||||||||||||| Sbjct: 868 aaagaagatctagaatatatctag-atgtgtgtgtctatttatctatattctatatttat 810 Query: 62 agataataatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgc 117 ||||| |||| || |||| ||||||| |||||||||| |||||||||||||||| Sbjct: 809 agata----tgtaatctttcttaacaaaaaatctccttatttt-actcttattgaatcgc 755 Query: 118 ggtaaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtctta 177 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 754 ggtaaagtattctaattcaataaagatttcgcgggcgaatatttactctttcctgtctta 695 Query: 178 tttgttaatttata-----aacttaccaaataagacaannnnnnnggtttgttccgccat 232 |||||||||||||| | ||||||||||||| ||| ||||||||||||||| Sbjct: 694 tttgttaatttatattataaccttaccaaataaggcaatttttttggtttgttccgccat 635 Query: 233 cccacccaatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgt 292 ||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||| Sbjct: 634 cccacccaatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctgt 575 Query: 293 cgttcccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaa 352 |||||||||| ||||||||| |||| ||||||||||||||| ||| |||||||||||||| Sbjct: 574 cgttcccactacttctcctttaatgattaggtctgaatcccacaatggagcttccaaaaa 515 Query: 353 atttctttccgagttaattttctcagttttattaacccgggcggctctttattattgctt 412 |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| || Sbjct: 514 atttctttccgagtcaattttctcagttttattaacccgggccgctctttattattgttt 455 Query: 413 aaaatttgtagttcttctttcaagttacaatttttcattctctatta-gttttattatat 471 ||||||||| ||||| ||||||||||| |||| ||||||| ||| |||| || ||| Sbjct: 454 taaatttgtatttcttgtttcaagttacgatttcgaattctctgttatttttttttttat 395 Query: 472 tgatgctttttcacattgccttttatgatgtaattcatagaccatacacagnggaattct 531 ||||||||| ||||||||||||||||||||||| |||||||||||||| | | ||| || Sbjct: 394 tgatgctttatcacattgccttttatgatgtaactcatagaccatacatattgaaatcct 335 Query: 532 atatcttatttatttcctcttccttctttctatcatccctccctttatccacatcccttt 591 ||||||| ||| ||||||||| ||||||||||||||||||| ||||||||||||||||| Sbjct: 334 atatctttctta-ttcctcttctttctttctatcatccctccttttatccacatcccttt 276 Query: 592 agttttgcttcacaacctanaatcc 616 ||||||||||||||||||| ||||| Sbjct: 275 agttttgcttcacaacctagaatcc 251
>gb|U54747.1|SLU54747 Schizostachyum luzonicum ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1065 Score = 674 bits (340), Expect = 0.0 Identities = 556/625 (88%), Gaps = 17/625 (2%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||||| ||||||||||||| Sbjct: 845 aaagaagatctagaatatatctag-atgtgtgtgtctatttatctatattctatatttat 787 Query: 62 agataataatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgc 117 ||||| |||| || |||| ||||||| |||||||||| |||||||||||||||| Sbjct: 786 agata----tgtaatctttcttaacaaaaaatctccttatttt-actcttattgaatcgc 732 Query: 118 ggtaaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtctta 177 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 731 ggtaaagtattctaattcaataaagatttcgcgggcgaatatttactctttcctgtctta 672 Query: 178 tttgttaatttata-----aacttaccaaataagacaannnnnnnggtttgttccgccat 232 |||||||||||||| | ||||||||||||| ||| ||||||||||||||| Sbjct: 671 tttgttaatttatattataaccttaccaaataaggcaatttttttggtttgttccgccat 612 Query: 233 cccacccaatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgt 292 ||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||| Sbjct: 611 cccacccaatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctgt 552 Query: 293 cgttcccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaa 352 |||||||||| ||||||||| |||| ||||||||||||||| ||| |||||||||||||| Sbjct: 551 cgttcccactacttctcctttaatgattaggtctgaatcccacaatggagcttccaaaaa 492 Query: 353 atttctttccgagttaattttctcagttttattaacccgggcggctctttattattgctt 412 |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| || Sbjct: 491 atttctttccgagtcaattttctcagttttattaacccgggccgctctttattattgttt 432 Query: 413 aaaatttgtagttcttctttcaagttacaatttttcattctctatta-gttttattatat 471 ||||||||| ||||| ||||||||||| |||| ||||||| ||| |||| || ||| Sbjct: 431 taaatttgtatttcttgtttcaagttacgatttcgaattctctgttatttttttttttat 372 Query: 472 tgatgctttttcacattgccttttatgatgtaattcatagaccatacacagnggaattct 531 ||||||||| ||||||||||||||||||||||| |||||||||||||| | | ||| || Sbjct: 371 tgatgctttatcacattgccttttatgatgtaactcatagaccatacatattgaaatcct 312 Query: 532 atatcttatttatttcctcttccttctttctatcatccctccctttatccacatcccttt 591 ||||||| ||| ||||||||| ||||||||||||||||||| ||||||||||||||||| Sbjct: 311 atatctttctta-ttcctcttctttctttctatcatccctccttttatccacatcccttt 253 Query: 592 agttttgcttcacaacctanaatcc 616 ||||||||||||||||||| ||||| Sbjct: 252 agttttgcttcacaacctagaatcc 228
>gb|AY912210.1| Nastus productus ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1067 Score = 672 bits (339), Expect = 0.0 Identities = 481/530 (90%), Gaps = 6/530 (1%) Strand = Plus / Minus Query: 92 ccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgg 151 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 751 ccttatttttactcttattgaatcgcggtaaagtattctaattcaataaagatttcgcgg 692 Query: 152 gcgaatatttactctttcctgtcttatttgttaatttata-----aacttaccaaataag 206 |||||||||||||||||||||||||||||||||||||||| | ||||||||||||| Sbjct: 691 gcgaatatttactctttcctgtcttatttgttaatttatattataaccttaccaaataag 632 Query: 207 acaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaata 266 ||| |||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 631 gcaatttttttggtttgttccgccatcccacccaatgaagtattaggattcttttcaata 572 Query: 267 aaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtct 326 |||||||||| | ||||||||||||||||||||||| ||||||||| |||| |||||||| Sbjct: 571 aaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatgattaggtct 512 Query: 327 gaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttatta 386 ||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 511 gaatcccacaatggagcttccaaaaaatttctttccgagtcaattttctcagttttatta 452 Query: 387 acccgggcggctctttattattgcttaaaatttgtagttcttctttcaagttacaatttt 446 ||| |||| |||||||||||||| || ||||||||| ||||| ||||||||||| |||| Sbjct: 451 acctgggccgctctttattattgttttaaatttgtatttcttgtttcaagttacgatttc 392 Query: 447 tcattctctattagttttattatattgatgctttttcacattgccttttatgatgtaatt 506 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 391 gaattctctgttatttttattatattgatgctttatcacattgccttttatgatgtaact 332 Query: 507 catagaccatacacagnggaattctatatcttatttatttcctcttccttctttctatca 566 ||||||||||||| | ||||| ||||||||| ||| ||||||||| |||||||||||| Sbjct: 331 catagaccatacatattggaatcctatatctttctta-ttcctcttctttctttctatca 273 Query: 567 tccctccctttatccacatccctttagttttgcttcacaacctanaatcc 616 ||||||| |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 272 tccctccttttatccacatccctttagttttgcttcacaacctagaatcc 223 Score = 85.7 bits (43), Expect = 2e-13 Identities = 62/67 (92%), Gaps = 1/67 (1%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||||| ||||||||||||| Sbjct: 843 aaagaagatctagaatatatctag-atgtgtgtgtctatttatctatattctatatttat 785 Query: 62 agataat 68 ||||||| Sbjct: 784 agataat 778
>gb|AY912205.1| Greslania rivularis ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1228 Score = 664 bits (335), Expect = 0.0 Identities = 553/624 (88%), Gaps = 16/624 (2%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||||| ||||||||||||| Sbjct: 850 aaagaagatctagaatatatctag-atgtgtgtgtctatttatctatattctatatttat 792 Query: 62 agataataatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgc 117 ||||||| ||| || |||| ||||||| ||||||||||||||||||||||||||| Sbjct: 791 agataat---gtaatctttcttaacaaaaaatctccttatttttactcttattgaatcgc 735 Query: 118 ggtaaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtctta 177 | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 734 gataaagtattctaattcaataaagatttcgcgggcgaatatttactctttcctgtctta 675 Query: 178 tttgttaatttata-----aacttaccaaataagacaannnnnnnggtttgttccgccat 232 |||||||||||||| | |||| |||||||| ||| ||||||||||||||| Sbjct: 674 tttgttaatttatattataaccttagcaaataaggcaatttttttggtttgttccgccat 615 Query: 233 cccacccaatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgt 292 |||||||||| |||| |||||||||||||||||||||||||||| | ||||||||||||| Sbjct: 614 cccacccaataaagtattaggattcttttcaataaaatcctatgcagtcataggttctgt 555 Query: 293 cgttcccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaa 352 |||||||||| ||||||||| |||| ||||||||||||||| ||| |||||||||||||| Sbjct: 554 cgttcccactacttctcctttaatgattaggtctgaatcccacaatggagcttccaaaaa 495 Query: 353 atttctttccgagttaattttctcagttttattaacccgggcggctctttattattgctt 412 |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| || Sbjct: 494 atttctttccgagtcaattttctcagttttattaacccgggccgctctttattattgttt 435 Query: 413 aaaatttgtagttcttctttcaagttacaatttttcattctctattagttttattatatt 472 ||||||||| ||||| ||||||||||| |||| ||||||| ||| ||| || |||| Sbjct: 434 taaatttgtatttcttgtttcaagttacgatttcgaattctctgtta--ttttttttatt 377 Query: 473 gatgctttttcacattgccttttatgatgtaattcatagaccatacacagnggaattcta 532 |||||||| ||||||||||||||||||||||| |||||||||||||| | ||||| ||| Sbjct: 376 gatgctttatcacattgccttttatgatgtaactcatagaccatacatattggaatccta 317 Query: 533 tatcttatttatttcctcttccttctttctatcatccctccctttatccacatcccttta 592 |||||| ||| ||||||||| |||||||||||||| |||| ||||||||||||| |||| Sbjct: 316 tatctttctta-ttcctcttctttctttctatcatctctccttttatccacatcctttta 258 Query: 593 gttttgcttcacaacctanaatcc 616 |||||||||||||||||| ||||| Sbjct: 257 gttttgcttcacaacctagaatcc 234
>gb|AY912204.1| Greslania circinata ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1170 Score = 650 bits (328), Expect = 0.0 Identities = 485/539 (89%), Gaps = 6/539 (1%) Strand = Plus / Minus Query: 83 aaaaaatatccttatttttactcttattgaatcgcggtaaagtattctaattcaataaga 142 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 789 aaaaaatctccttatttttactcttattgaatcgcggtaaagtattctaattcaataaag 730 Query: 143 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 197 ||||||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct: 729 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttatattataacctta 670 Query: 198 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 257 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 669 ccaaataaggcaattcttttggtttgttccgccatcccacccaatgaagtattaggattc 610 Query: 258 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 317 ||||||||||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 609 ttttcaataaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 550 Query: 318 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 377 ||||||||||||||| ||| ||||||||||| |||||||||||||||| |||||||||| Sbjct: 549 attaggtctgaatcccacaatggagcttccaataaatttctttccgagtcaattttctca 490 Query: 378 gttttattaacccgggcggctctttattattgcttaaaatttgtagttcttctttcaagt 437 ||||||||||||||| | ||||||| |||||| || ||||||||| ||||| |||||||| Sbjct: 489 gttttattaacccggtccgctctttgttattgttttaaatttgtatttcttgtttcaagt 430 Query: 438 tacaatttttcattctctattagttttattatattgatgctttttcacattgccttttat 497 || |||| ||||||| ||| |||| ||||||||||||||| |||||||||||||||| Sbjct: 429 tatgatttcgaattctctgttattttttttatattgatgctttatcacattgccttttat 370 Query: 498 gatgtaattcatagaccatacacagnggaattctatatcttatttatttcctcttccttc 557 ||||||| |||||||||||||| | ||||| ||||||||| ||| ||||||||| ||| Sbjct: 369 gatgtaactcatagaccatacatattggaatcctatatctttctta-ttcctcttctttc 311 Query: 558 tttctatcatccctccctttatccacatccctttagttttgcttcacaacctanaatcc 616 |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 310 tttctatcatccctccttttatccacatccctttagttttgcttcacaacctagaatcc 252
>gb|AF133476.1|AF133476 Brachyelytrum erectum ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1248 Score = 650 bits (328), Expect = 0.0 Identities = 464/511 (90%), Gaps = 1/511 (0%) Strand = Plus / Minus Query: 104 tcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaatatttac 163 ||||||||||| | | |||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 762 tcttattgaattgggttaaagtattctaattcaataaggatttcgcgggcgaatatttac 703 Query: 164 tctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnnggtttg 223 ||||||||||||||||||||||||||||| ||||||||||||| ||| |||||| Sbjct: 702 tctttcctgtcttatttgttaatttataaccttaccaaataaggcaatttttttggtttg 643 Query: 224 ttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatcat 283 ||||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||| Sbjct: 642 ttccgccatcccatccaatgaagtattaggattcttttcaataaaatcctatggagtcat 583 Query: 284 aggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacggagc 343 ||||||||||||||||||||||||| || ||||||||||||| |||||||||| ||||| Sbjct: 582 gggttctgtcgttcccactgcttctcttttaatggttaggtctcaatcccgcaatggagc 523 Query: 344 ttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctcttta 403 ||||||||||| | ||||||||| |||||||||||||||| |||||||| | |||||||| Sbjct: 522 ttccaaaaaatatatttccgagtaaattttctcagttttaataacccggaccgctcttta 463 Query: 404 ttattgcttaaaatttgtagttcttctttcaagttacaatttttcattctctattagttt 463 ||||||||| ||||| ||||||||| ||||||||||| |||| ||| ||| ||| ||| Sbjct: 462 ttattgctttaaattagtagttcttgtttcaagttacgatttcgaattttctgttatttt 403 Query: 464 tattatattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagn 523 ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| | Sbjct: 402 tattatattgatgctttatcacattgccttttatgatataattcatagaccatacatatt 343 Query: 524 ggaattctatatcttatttatttcctcttccttctttctatcatccctccctttatccac 583 ||||| ||||||||| |||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 342 ggaatcctatatctttttta-ttcctcttccttctttctatcatccttccctttatccac 284 Query: 584 atccctttagttttgcttcacaacctanaat 614 ||||||||||||||||||||||||||| ||| Sbjct: 283 atccctttagttttgcttcacaacctagaat 253 Score = 40.1 bits (20), Expect = 8.5 Identities = 51/60 (85%), Gaps = 1/60 (1%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||| ||||||||||| | |||| |||| |||||||| | ||||||||||||| Sbjct: 863 aaagaagatttagaatatatcta-aatgtttgtgtctatttatccatattctatatttat 805
>gb|AF133473.1|AF133473 Otatea acuminata ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1185 Score = 650 bits (328), Expect = 0.0 Identities = 467/515 (90%), Gaps = 6/515 (1%) Strand = Plus / Minus Query: 107 tattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaatatttactct 166 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 758 tattgaatcgcggtaaagtattctaattcaataaagatttcgcgggcgaatatttactct 699 Query: 167 ttcctgtcttatttgttaatttata-----aacttaccaaataagacaannnnnnnggtt 221 ||||||||||||||||||||||||| | ||||||||||||| ||| |||| Sbjct: 698 ttcctgtcttatttgttaatttatattataaccttaccaaataaggcaatttttttggtt 639 Query: 222 tgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatc 281 |||||||||||||||||||||||||| |||||||||||||||||||||||||||| | || Sbjct: 638 tgttccgccatcccacccaatgaagtattaggattcttttcaataaaatcctatgcagtc 579 Query: 282 ataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacgga 341 ||||||||||||||||||||| ||||||||| ||||||||||||||||| || ||| ||| Sbjct: 578 ataggttctgtcgttcccactacttctcctttaatggttaggtctgaattccacaatgga 519 Query: 342 gcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctctt 401 ||||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||| Sbjct: 518 gcttccaaaaaatttctttccaagtcaattttctcagttttattaacccgggccgctctt 459 Query: 402 tattattgcttaaaatttgtagttcttctttcaagttacaatttttcattctctattagt 461 ||||||||||| ||||||||| ||||| |||| |||||| |||| ||||||| ||| | Sbjct: 458 tattattgcttcaaatttgtatttcttgtttcgagttacgatttcgaattctctgttatt 399 Query: 462 tttattatattgatgctttttcacattgccttttatgatgtaattcatagaccatacaca 521 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 398 tttattatattgatgctttatcacattgccttttatgatgtaattcatagaccatacata 339 Query: 522 gnggaattctatatcttatttatttcctcttccttctttctatcatccctccctttatcc 581 ||||| ||||||||| ||| ||||||||| ||||||||||||||||||| ||||||| Sbjct: 338 ttggaatcctatatctttctta-ttcctcttctttctttctatcatccctccttttatcc 280 Query: 582 acatccctttagttttgcttcacaacctanaatcc 616 ||||||||||||||||||||||||||||| ||||| Sbjct: 279 acatccctttagttttgcttcacaacctagaatcc 245 Score = 81.8 bits (41), Expect = 3e-12 Identities = 60/65 (92%), Gaps = 1/65 (1%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||||| ||||||||||||| Sbjct: 820 aaagaagatctagaatatatctag-atgtgtgtgtctatttatctatattctatatttat 762 Query: 62 agata 66 ||||| Sbjct: 761 agata 757
>gb|U54749.1|OAU54749 Otatea acuminata ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1025 Score = 650 bits (328), Expect = 0.0 Identities = 467/515 (90%), Gaps = 6/515 (1%) Strand = Plus / Minus Query: 107 tattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaatatttactct 166 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 735 tattgaatcgcggtaaagtattctaattcaataaagatttcgcgggcgaatatttactct 676 Query: 167 ttcctgtcttatttgttaatttata-----aacttaccaaataagacaannnnnnnggtt 221 ||||||||||||||||||||||||| | ||||||||||||| ||| |||| Sbjct: 675 ttcctgtcttatttgttaatttatattataaccttaccaaataaggcaatttttttggtt 616 Query: 222 tgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatc 281 |||||||||||||||||||||||||| |||||||||||||||||||||||||||| | || Sbjct: 615 tgttccgccatcccacccaatgaagtattaggattcttttcaataaaatcctatgcagtc 556 Query: 282 ataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacgga 341 ||||||||||||||||||||| ||||||||| ||||||||||||||||| || ||| ||| Sbjct: 555 ataggttctgtcgttcccactacttctcctttaatggttaggtctgaattccacaatgga 496 Query: 342 gcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctctt 401 ||||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||| Sbjct: 495 gcttccaaaaaatttctttccaagtcaattttctcagttttattaacccgggccgctctt 436 Query: 402 tattattgcttaaaatttgtagttcttctttcaagttacaatttttcattctctattagt 461 ||||||||||| ||||||||| ||||| |||| |||||| |||| ||||||| ||| | Sbjct: 435 tattattgcttcaaatttgtatttcttgtttcgagttacgatttcgaattctctgttatt 376 Query: 462 tttattatattgatgctttttcacattgccttttatgatgtaattcatagaccatacaca 521 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 375 tttattatattgatgctttatcacattgccttttatgatgtaattcatagaccatacata 316 Query: 522 gnggaattctatatcttatttatttcctcttccttctttctatcatccctccctttatcc 581 ||||| ||||||||| ||| ||||||||| ||||||||||||||||||| ||||||| Sbjct: 315 ttggaatcctatatctttctta-ttcctcttctttctttctatcatccctccttttatcc 257 Query: 582 acatccctttagttttgcttcacaacctanaatcc 616 ||||||||||||||||||||||||||||| ||||| Sbjct: 256 acatccctttagttttgcttcacaacctagaatcc 222 Score = 81.8 bits (41), Expect = 3e-12 Identities = 60/65 (92%), Gaps = 1/65 (1%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||||| ||||||||||||| Sbjct: 797 aaagaagatctagaatatatctag-atgtgtgtgtctatttatctatattctatatttat 739 Query: 62 agata 66 ||||| Sbjct: 738 agata 734
>gb|AF133474.1|AF133474 Poa pratensis ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1097 Score = 636 bits (321), Expect = e-179 Identities = 472/526 (89%), Gaps = 7/526 (1%) Strand = Plus / Minus Query: 97 tttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaa 156 |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| Sbjct: 783 tttttactcttattgaataatggtaaagtattctaattcaataaggatttcgcgggcgaa 724 Query: 157 tatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnn 216 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 723 tatttactctttcctgtcttatttgttaatttataaccttaccaaataagacaatttttt 664 Query: 217 nggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatg 276 |||||| ||||||||||||||||||||||| |||||||| |||| ||||||||||||| Sbjct: 663 tggtttgctccgccatcccacccaatgaagtattaggatttttttaaataaaatcctatt 604 Query: 277 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 336 |||||||||||| |||||||||||||||||||||||||||||||||| ||| || || Sbjct: 603 aaatcataggttccgtcgttcccactgcttctccttgaatggttaggttctaattccaca 544 Query: 337 acggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcgg 396 | |||||||| ||||||| |||||||||||||||||||||||||||||||| |||| ||| Sbjct: 543 atggagcttcaaaaaaatatctttccgagttaattttctcagttttattaatccggtcgg 484 Query: 397 c-------tctttattattgcttaaaatttgtagttcttctttcaagttacaatttttca 449 | ||||||||||||||| |||||| ||||||| ||||||||||| |||| | | Sbjct: 483 ctctttattctttattattgctttaaatttagagttcttttttcaagttacgatttctaa 424 Query: 450 ttctctattagttttattatattgatgctttttcacattgccttttatgatgtaattcat 509 ||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||| Sbjct: 423 ttctctattagttttattatattgatgctttatcacattgttttttatgatgcaattcat 364 Query: 510 agaccatacacagnggaattctatatcttatttatttcctcttccttctttctatcatcc 569 |||||||||| | ||||| |||||||||| ||| ||||||||||||||||||||||||| Sbjct: 363 agaccatacatattggaatcctatatcttacttaattcctcttccttctttctatcatcc 304 Query: 570 ctccctttatccacatccctttagttttgcttcacaacctanaatc 615 ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 303 ctccctttatccacatccctttagttttgcttcacaacctagaatc 258
>gb|AF133475.1|AF133475 Avena sativa ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1187 Score = 620 bits (313), Expect = e-174 Identities = 550/628 (87%), Gaps = 23/628 (3%) Strand = Plus / Minus Query: 1 aaaagaagatctagaatatatccagtatgtgtgtggatat-ttatctaaattctatat-t 58 |||||||||||||||||||||| || ||||||||| ||| ||||||||||||||||| | Sbjct: 816 aaaagaagatctagaatatatctag-atgtgtgtgtctatattatctaaattctatattt 758 Query: 59 tatagataataatgtagtccttctaaaaaatatccttatttttactcttattgaa----- 113 |||||| | |||| |||| |||||||| |||||||||||||||||||| Sbjct: 757 tatagagagtaat-----cctt----aaaatatctttatttttactcttattgaataatg 707 Query: 114 -tcgcggtaaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctg 172 | ||||||||||||||||| | ||| |||||||||||||||||||||||||| ||| Sbjct: 706 gtaatggtaaagtattctaattttaaaaggatttcgcgggcgaatatttactcttttctg 647 Query: 173 tcttatttgttaatttataaacttaccaaataagacaannnnnnnggtttgttccgccat 232 |||||||||||||||||||| |||||||||||||| || ||||||||||||||| Sbjct: 646 tcttatttgttaatttataaccttaccaaataagaaaatttttttggtttgttccgccat 587 Query: 233 cccacccaatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgt 292 || |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 586 cctacccaatgaagtattaggattcttttcaataaaatcctatggaatcataggttctgt 527 Query: 293 cgttcccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaa 352 |||||||||||| ||||||||||||||||||||||||| || ||| |||||||||||||| Sbjct: 526 cgttcccactgcctctccttgaatggttaggtctgaattccacaatggagcttccaaaaa 467 Query: 353 atttctttccgagttaattttctcagttttattaacccgggcggctctttattattgctt 412 |||||||||| |||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 466 atttctttcccagttaattttctcagttttattaaccaggatggctctttattattgctt 407 Query: 413 aaaatttgtagttcttctttcaagttaca-----atttttcattctctattagttttatt 467 |||||| |||||||| ||||||||||| |||| | |||||||||| ||||||| Sbjct: 406 taaatttctagttcttgtttcaagttacgttacgatttctaattctctattttttttatt 347 Query: 468 atattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagnggaa 527 ||||||||||||| ||||||||| |||||||||| ||||||||||||||||| | |||| Sbjct: 346 atattgatgctttatcacattgctttttatgatgcaattcatagaccatacatattggaa 287 Query: 528 ttctatatcttatttatttcctcttccttctttctatcatccctccctttatccacatcc 587 | |||||||||| ||| | ||||||| ||||||||||||||||||||||||||| ||||| Sbjct: 286 tcctatatcttacttaatccctcttctttctttctatcatccctccctttatccgcatcc 227 Query: 588 ctttagttttgcttcacaacctanaatc 615 |||||||||| |||||||||||| |||| Sbjct: 226 ctttagttttccttcacaacctagaatc 199
>gb|AY912201.1| Cathariostachys capitata ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1202 Score = 609 bits (307), Expect = e-171 Identities = 545/624 (87%), Gaps = 14/624 (2%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||| | |||||||||| ||||||||||||| Sbjct: 845 aaagaagatctagaatatatctag-atgtgtgggtctatttatctatattctatatttat 787 Query: 62 agataataatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgc 117 ||||||| ||| || |||| ||||||| |||||||||||||||| |||||||||| Sbjct: 786 agataat---gtaatctttcttaacaaaaaatctccttatttttactctgattgaatcgc 730 Query: 118 ggtaaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtctta 177 || ||||||||||||||||||| ||||||||||||||||| |||||| |||||||| | Sbjct: 729 gggcaagtattctaattcaataaagatttcgcgggcgaatatctactctctcctgtctca 670 Query: 178 tttgttaatttata-----aacttaccaaataagacaannnnnnnggtttgttccgccat 232 ||||||||| |||| | |||| |||||||| ||| || |||||||||||| Sbjct: 669 tttgttaatctatatcataaccttatcaaataaggcaattattttggnttgttccgccat 610 Query: 233 cccacccaatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgt 292 ||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||| Sbjct: 609 cccacccaatgaagtattaggattcttttcaataaaatcctatgcaggcataggttctgt 550 Query: 293 cgttcccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaa 352 |||||||||| ||||||||| ||||| |||||||||||||| ||| |||||||||||||| Sbjct: 549 cgttcccactacttctcctttaatggataggtctgaatcccacaatggagcttccaaaaa 490 Query: 353 atttctttccgagttaattttctcagttttattaacccgggcggctctttattattgctt 412 |||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||| Sbjct: 489 atttctttccgagtcaattttctcaggtttattaacccgggccgctctttattattgctt 430 Query: 413 aaaatttgtagttcttctttcaagttacaatttttcattctctattagttttattatatt 472 ||||||| | ||||| ||||||||||| |||| || |||| | | |||||||||||| Sbjct: 429 taaatttggatttcttgtttcaagttacgatttcgaatgctctgtgatttttattatatt 370 Query: 473 gatgctttttcacattgccttttatgatgtaattcatagaccatacacagnggaattcta 532 |||||||| ||||||||| ||||||||||||| |||||| ||||||| | ||||| ||| Sbjct: 369 gatgctttatcacattgctttttatgatgtaactcataggccatacatattggaatccta 310 Query: 533 tatcttatttatttcctcttccttctttctatcatccctccctttatccacatcccttta 592 |||||| ||| ||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 309 tatctttctta-ttcctcttctttctttctatcatccctccttttatccacatcccttta 251 Query: 593 gttttgcttcacaacctanaatcc 616 |||||||||||||||||| ||||| Sbjct: 250 gttttgcttcacaacctagaatcc 227
>gb|AF133492.1|AF133492 Humbertochloa greenwayi ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1218 Score = 609 bits (307), Expect = e-171 Identities = 468/523 (89%), Gaps = 5/523 (0%) Strand = Plus / Minus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct: 769 ttttactcttattgaatcgcggtaaagtactctaattcaataaagatttcgcgggcgaat 710 Query: 158 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 217 |||||||||||||||||||||||||||||| |||| |||| |||||||| ||| Sbjct: 709 atttactctttcctgtcttatttgttaattcataaccttatcaaataaggcaactttttt 650 Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||| Sbjct: 649 ggtttgttccgccatcccacccaatgaagtattaggattgttttcaaaaaaatcctatcc 590 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | |||||||||||||||||||||| |||||||||| ||||||||||| |||||| ||||| Sbjct: 589 agtcataggttctgtcgttcccacagcttctcctttaatggttaggtttgaatctcgcaa 530 Query: 338 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 397 |||||||||||||||| ||||||||||| |||||||||||||||||||||||||| || Sbjct: 529 tggagcttccaaaaaatatctttccgagtccattttctcagttttattaacccgggctgc 470 Query: 398 tctttattattgcttaaaatttgtagttcttctttcaag----ttacaatttttcattct 453 ||||| |||||||||| |||||||| ||||| |||||| |||| ||||| ||||| Sbjct: 469 tctttgttattgcttagaatttgtatttcttgtttcaatcaaattacgattttgaattct 410 Query: 454 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 513 || || |||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 409 ctgctatttttattatattgatgctttatcacattgccttttatgatgtaattcatagac 350 Query: 514 catacacagnggaattctatatcttatttatttcctcttccttctttctatcatccctcc 573 |||||| | ||||| ||||||||| |||||| |||||||||||||||||||||||||| Sbjct: 349 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccctcc 291 Query: 574 ctttatccacatccctttagttttgcttcacaacctanaatcc 616 |||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 290 ttttatccacatccctttagttttggttcacaacctagaatcc 248 Score = 61.9 bits (31), Expect = 2e-06 Identities = 53/59 (89%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 ||||| ||||||||||||||| || ||||||||| |||||||||| |||||||||||| Sbjct: 868 aaagacgatctagaatatatctag-atgtgtgtgtttatttatctatattctatattta 811
>gb|U54750.1|RPU54750 Rhipidocladum pittieri ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1010 Score = 601 bits (303), Expect = e-168 Identities = 451/502 (89%), Gaps = 6/502 (1%) Strand = Plus / Minus Query: 120 taaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatt 179 ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 726 taaagtattctaattcaataaagatttcgcgggcgaatatttactctttcctgccttatt 667 Query: 180 tgttaatttata-----aacttaccaaataagacaannnnnnnggtttgttccgccatcc 234 |||||||||||| | ||||||||||||| ||| ||||||||||||||||| Sbjct: 666 tgttaatttatattataaccttaccaaataaggcaatttttttggtttgttccgccatcc 607 Query: 235 cacccaatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcg 294 ||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||| Sbjct: 606 cacccaatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctgtcg 547 Query: 295 ttcccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaat 354 |||||||| ||||||||| ||||||||||||||||| || ||| |||||||||||||||| Sbjct: 546 ttcccactacttctcctttaatggttaggtctgaattccacaatggagcttccaaaaaat 487 Query: 355 ttctttccgagttaattttctcagttttattaacccgggcggctctttattattgcttaa 414 |||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 486 ttctttccgagtcaattttctcagttttattaaccccggacgctctttattattgcttaa 427 Query: 415 aatttgtagttcttctttcaagttacaatttttcattctctattagttttattatattga 474 ||||| || ||||| |||| |||||| |||| |||| || ||| |||||||||||||| Sbjct: 426 aatttctatttcttgtttcgagttacgatttcgaattcgctgttatttttattatattga 367 Query: 475 tgctttttcacattgccttttatgatgtaattcatagaccatacacagnggaattctata 534 |||||| |||||||||||||||||||||||||||||||||||||| | ||||| ||||| Sbjct: 366 tgctttatcacattgccttttatgatgtaattcatagaccatacatattggaatcctata 307 Query: 535 tcttatttatttcctcttccttctttctatcatccctccctttatccacatccctttagt 594 |||| ||| ||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 306 tctttctta-ttcctcttctttctttctatcatccctccttttatccacatccctttagt 248 Query: 595 tttgcttcacaacctanaatcc 616 |||||||||||||||| ||||| Sbjct: 247 tttgcttcacaacctagaatcc 226 Score = 69.9 bits (35), Expect = 1e-08 Identities = 54/59 (91%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 ||||||||||||||||||||| || ||||||||| |||||||||| |||||||||||| Sbjct: 782 aaagaagatctagaatatatctag-atgtgtgtgtctatttatctatattctatattta 725
>gb|DQ289157.1| Oryza punctata J ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1116 Score = 593 bits (299), Expect = e-166 Identities = 467/523 (89%), Gaps = 6/523 (1%) Strand = Plus / Minus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 766 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 707 Query: 158 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 217 |||||||||||||||||||||||||||||| |||| |||| |||||||| ||| Sbjct: 706 atttactctttcctgtcttatttgttaattcataaccttatcaaataaggcaattttttt 647 Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 646 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 587 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 586 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 527 Query: 338 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 397 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 526 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 468 Query: 398 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 453 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 467 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 408 Query: 454 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 513 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 407 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 348 Query: 514 catacacagnggaattctatatcttatttatttcctcttccttctttctatcatccctcc 573 |||||| | ||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 347 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 289 Query: 574 ctttatccacatccctttagttttgcttcacaacctanaatcc 616 ||||||||||||||||||||||||||||||||| || ||||| Sbjct: 288 ttttatccacatccctttagttttgcttcacaacttagaatcc 246 Score = 46.1 bits (23), Expect = 0.14 Identities = 51/59 (86%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 ||||| ||||||||||||||| || |||||| | |||||||||| |||||||||||| Sbjct: 861 aaagaggatctagaatatatctag-atgtgtatctttatttatctatattctatattta 804
>gb|DQ289156.1| Oryza grandiglumis I ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1117 Score = 593 bits (299), Expect = e-166 Identities = 467/523 (89%), Gaps = 6/523 (1%) Strand = Plus / Minus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 766 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 707 Query: 158 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 217 |||||||||||||||||||||||||||||| |||| |||| |||||||| ||| Sbjct: 706 atttactctttcctgtcttatttgttaattcataaccttatcaaataaggcaattttttt 647 Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 646 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 587 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 586 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 527 Query: 338 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 397 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 526 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 468 Query: 398 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 453 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 467 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 408 Query: 454 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 513 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 407 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 348 Query: 514 catacacagnggaattctatatcttatttatttcctcttccttctttctatcatccctcc 573 |||||| | ||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 347 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 289 Query: 574 ctttatccacatccctttagttttgcttcacaacctanaatcc 616 ||||||||||||||||||||||||||||||||| || ||||| Sbjct: 288 ttttatccacatccctttagttttgcttcacaacttagaatcc 246 Score = 54.0 bits (27), Expect = 6e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 ||||| ||||||||||||||| || |||||| || |||||||||| |||||||||||| Sbjct: 862 aaagaggatctagaatatatctag-atgtgtatgtttatttatctatattctatattta 805
>gb|DQ289155.1| Oryza latifolia H ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1118 Score = 593 bits (299), Expect = e-166 Identities = 467/523 (89%), Gaps = 6/523 (1%) Strand = Plus / Minus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 765 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 706 Query: 158 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 217 |||||||||||||||||||||||||||||| |||| |||| |||||||| ||| Sbjct: 705 atttactctttcctgtcttatttgttaattcataaccttatcaaataaggcaattttttt 646 Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 645 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 586 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 585 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 526 Query: 338 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 397 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 525 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 467 Query: 398 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 453 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 466 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 407 Query: 454 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 513 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 406 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 347 Query: 514 catacacagnggaattctatatcttatttatttcctcttccttctttctatcatccctcc 573 |||||| | ||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 346 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 288 Query: 574 ctttatccacatccctttagttttgcttcacaacctanaatcc 616 ||||||||||||||||||||||||||||||||| || ||||| Sbjct: 287 ttttatccacatccctttagttttgcttcacaacttagaatcc 245 Score = 54.0 bits (27), Expect = 6e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 ||||| ||||||||||||||| || |||||| || |||||||||| |||||||||||| Sbjct: 863 aaagaggatctagaatatatctag-atgtgtatgtttatttatctatattctatattta 806
>gb|DQ289154.1| Oryza officinalis G ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1118 Score = 593 bits (299), Expect = e-166 Identities = 467/523 (89%), Gaps = 6/523 (1%) Strand = Plus / Minus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 766 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 707 Query: 158 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 217 |||||||||||||||||||||||||||||| |||| |||| |||||||| ||| Sbjct: 706 atttactctttcctgtcttatttgttaattcataaccttatcaaataaggcaattttttt 647 Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 646 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 587 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 586 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 527 Query: 338 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 397 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 526 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 468 Query: 398 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 453 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 467 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 408 Query: 454 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 513 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 407 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 348 Query: 514 catacacagnggaattctatatcttatttatttcctcttccttctttctatcatccctcc 573 |||||| | ||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 347 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 289 Query: 574 ctttatccacatccctttagttttgcttcacaacctanaatcc 616 ||||||||||||||||||||||||||||||||| || ||||| Sbjct: 288 ttttatccacatccctttagttttgcttcacaacttagaatcc 246 Score = 54.0 bits (27), Expect = 6e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 ||||| ||||||||||||||| || |||||| || |||||||||| |||||||||||| Sbjct: 863 aaagaggatctagaatatatctag-atgtgtatgtttatttatctatattctatattta 806
>gb|AF133485.1|AF133485 Arundo donax ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1207 Score = 589 bits (297), Expect = e-165 Identities = 476/539 (88%), Gaps = 16/539 (2%) Strand = Plus / Minus Query: 91 tccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcg 150 |||||||||||||||||||||||||| |||||||||||||||| |||||| |||||||| Sbjct: 791 tccttatttttactcttattgaatcgtggtaaagtattctaatccaataaagatttcgcg 732 Query: 151 ggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaa 210 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct: 731 ggcgaatatttactctttcctgtcttatttgttaatttataaccttaccaaataaagcaa 672 Query: 211 nnnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaat 270 |||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 671 tttttttggtttgttccgccatcccacccaatgaagtattaggattcttttcaataaaat 612 Query: 271 cctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaat 330 |||||| | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||| Sbjct: 611 cctatgtagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaat 552 Query: 331 cccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaaccc 390 || |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 551 cctgcaatggagcttccaaaaaatttctttccgagtcaattttctcagttttattaaccc 492 Query: 391 gggcggctc-------tttattattgcttaaaatttgtagttcttctttcaagttacaat 443 |||| |||| ||||||||||||| |||||| | || || ||||||||||| || Sbjct: 491 gggctgctccttattatttattattgctttaaattttgattttttatttcaagttacgat 432 Query: 444 ttttcattctctattagttttatt--------atattgatgctttttcacattgcctttt 495 || ||||||| ||| ||||||| ||||||||||||| |||||||||||||| Sbjct: 431 ttcgaattctctcttatttttattattttattatattgatgctttatcacattgcctttt 372 Query: 496 atgatgtaattcatagaccatacacagnggaattctatatcttatttatttcctcttcct 555 |||||||||||||||||||||||||| ||||| ||||||||| ||| ||| ||||||| Sbjct: 371 atgatgtaattcatagaccatacacattggaatcctatatctttctta-ttcttcttcct 313 Query: 556 tctttctatcatccctccctttatccacatccctttagttttgcttcacaacctanaat 614 ||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct: 312 tctgtctatcatccctccttttatccacatccctttagttttgcttcacaacctagaat 254 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatcca 24 ||||||||||||||||||||||| Sbjct: 861 aaagaagatctagaatatatcca 839
>gb|AF133458.1|AF133458 Leersia virginica ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1209 Score = 589 bits (297), Expect = e-165 Identities = 460/514 (89%), Gaps = 6/514 (1%) Strand = Plus / Minus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 747 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 688 Query: 158 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 217 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 687 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 628 Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||||||||||||||| || ||| | ||||||| |||||||||| Sbjct: 627 ggtttgttccgccatcccacccaatgaagtattgggacttttttcaagaaaatcctatcc 568 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 567 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 508 Query: 338 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 397 |||||||||||||||||||||||||||| || ||||||||||||||||||||||| || Sbjct: 507 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaacccgggacgc 449 Query: 398 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 453 ||||| ||||||||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 448 tctttgttattgcttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 389 Query: 454 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 513 || ||| |||||||||||||||||||| ||||||||| ||||||| |||||||||||||| Sbjct: 388 ctgttatttttattatattgatgctttatcacattgctttttatggtgtaattcatagac 329 Query: 514 catacacagnggaattctatatcttatttatttcctcttccttctttctatcatccctcc 573 |||||| | ||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 328 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 270 Query: 574 ctttatccacatccctttagttttgcttcacaac 607 ||||||||||||||||||||||||||||||||| Sbjct: 269 ttttatccacatccctttagttttgcttcacaac 236 Score = 77.8 bits (39), Expect = 4e-11 Identities = 61/67 (91%), Gaps = 1/67 (1%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || |||||| || |||||||||| ||||||||||||| Sbjct: 852 aaagaagatctagaatatatctag-atgtgtatgtttatttatctatattctatatttat 794 Query: 62 agataat 68 ||||||| Sbjct: 793 agataat 787
>gb|AY847081.1| Phragmites australis ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1166 Score = 581 bits (293), Expect = e-162 Identities = 470/530 (88%), Gaps = 9/530 (1%) Strand = Plus / Minus Query: 94 ttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggc 153 ||||||||||||||||||||||| | |||||||||||||| |||||| ||||||||||| Sbjct: 745 ttatttttactcttattgaatcgtg-taaagtattctaatccaataaagatttcgcgggc 687 Query: 154 gaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannn 213 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 686 gaatatttactctttcctgtcttatttgttaatttataaccttaccaaataagacaattt 627 Query: 214 nnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcct 273 |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| Sbjct: 626 ttttggtttgttccgccatcccacccaatgaagtattaggattcttttgaataaaatcct 567 Query: 274 atggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatccc 333 ||| | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||||| Sbjct: 566 atgcagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcct 507 Query: 334 gcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccggg 393 |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct: 506 gcaatggagcttccaaaaaatttctttccgagtcaattttctcagttttattaaccccgg 447 Query: 394 cggctctttattattgcttaaaatttgtagttcttctttcaagttacaatttttcattct 453 |||| |||||||||||| || ||| || || ||||||||||| |||| ||||| Sbjct: 446 ttgctccttattattgctttaatttttgtttttttgtttcaagttacgatttcgaattct 387 Query: 454 ctattagtt-------ttattatattgatgctttttcacattgccttttatgatgtaatt 506 || ||| || |||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 386 cttttattttattattttattatattgatgctttatcacattgccttttatgatgtaatt 327 Query: 507 catagaccatacacagnggaattctatatcttatttatttcctcttccttctttctatca 566 ||||||||||||||| ||||| ||||||||| ||| ||| |||||||||| ||||||| Sbjct: 326 catagaccatacacattggaatcctatatctttctta-ttcttcttccttctatctatca 268 Query: 567 tccctccctttatccacatccctttagttttgcttcacaacctanaatcc 616 ||||||| |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 267 tccctccttttatccacatccctttagttttgcttcacaacctagaatcc 218 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatat 21 |||||||||||||||||||| Sbjct: 816 aaagaagatctagaatatat 797
>ref|XM_481016.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2472 Score = 579 bits (292), Expect = e-162 Identities = 467/524 (89%), Gaps = 7/524 (1%) Strand = Plus / Minus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 2458 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 2399 Query: 158 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 217 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 2398 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 2339 Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 2338 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 2279 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 2278 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 2219 Query: 338 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 397 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 2218 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 2160 Query: 398 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 453 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 2159 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 2100 Query: 454 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 513 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 2099 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 2040 Query: 514 catacacagnggaattctatatcttatttatttcctcttccttctttctatcatccctcc 573 |||||| | ||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 2039 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 1981 Query: 574 ctttatccacat-ccctttagttttgcttcacaacctanaatcc 616 |||||| |||| |||||||||||||||||||||| || ||||| Sbjct: 1980 ttttatctacatcccctttagttttgcttcacaacttagaatcc 1937
>ref|XM_481017.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2472 Score = 579 bits (292), Expect = e-162 Identities = 467/524 (89%), Gaps = 7/524 (1%) Strand = Plus / Minus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 2458 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 2399 Query: 158 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 217 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 2398 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 2339 Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 2338 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 2279 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 2278 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 2219 Query: 338 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 397 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 2218 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 2160 Query: 398 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 453 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 2159 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 2100 Query: 454 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 513 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 2099 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 2040 Query: 514 catacacagnggaattctatatcttatttatttcctcttccttctttctatcatccctcc 573 |||||| | ||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 2039 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 1981 Query: 574 ctttatccacat-ccctttagttttgcttcacaacctanaatcc 616 |||||| |||| |||||||||||||||||||||| || ||||| Sbjct: 1980 ttttatctacatcccctttagttttgcttcacaacttagaatcc 1937
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 579 bits (292), Expect = e-162 Identities = 467/524 (89%), Gaps = 7/524 (1%) Strand = Plus / Plus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 78456 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 78515 Query: 158 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 217 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 78516 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 78575 Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 78576 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 78635 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 78636 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 78695 Query: 338 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 397 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 78696 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 78754 Query: 398 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 453 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 78755 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 78814 Query: 454 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 513 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 78815 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 78874 Query: 514 catacacagnggaattctatatcttatttatttcctcttccttctttctatcatccctcc 573 |||||| | ||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 78875 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 78933 Query: 574 ctttatccacat-ccctttagttttgcttcacaacctanaatcc 616 |||||| |||| |||||||||||||||||||||| || ||||| Sbjct: 78934 ttttatctacatcccctttagttttgcttcacaacttagaatcc 78977 Score = 54.0 bits (27), Expect = 6e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Plus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 ||||| ||||||||||||||| || |||||| || |||||||||| |||||||||||| Sbjct: 78357 aaagaggatctagaatatatctag-atgtgtatgtttatttatctatattctatattta 78414
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 579 bits (292), Expect = e-162 Identities = 467/524 (89%), Gaps = 7/524 (1%) Strand = Plus / Plus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 78456 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 78515 Query: 158 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 217 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 78516 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 78575 Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 78576 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 78635 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 78636 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 78695 Query: 338 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 397 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 78696 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 78754 Query: 398 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 453 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 78755 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 78814 Query: 454 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 513 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 78815 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 78874 Query: 514 catacacagnggaattctatatcttatttatttcctcttccttctttctatcatccctcc 573 |||||| | ||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 78875 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 78933 Query: 574 ctttatccacat-ccctttagttttgcttcacaacctanaatcc 616 |||||| |||| |||||||||||||||||||||| || ||||| Sbjct: 78934 ttttatctacatcccctttagttttgcttcacaacttagaatcc 78977 Score = 54.0 bits (27), Expect = 6e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Plus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 ||||| ||||||||||||||| || |||||| || |||||||||| |||||||||||| Sbjct: 78357 aaagaggatctagaatatatctag-atgtgtatgtttatttatctatattctatattta 78414
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 579 bits (292), Expect = e-162 Identities = 467/524 (89%), Gaps = 7/524 (1%) Strand = Plus / Plus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 78399 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 78458 Query: 158 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 217 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 78459 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 78518 Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 78519 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 78578 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 78579 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 78638 Query: 338 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 397 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 78639 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 78697 Query: 398 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 453 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 78698 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 78757 Query: 454 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 513 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 78758 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 78817 Query: 514 catacacagnggaattctatatcttatttatttcctcttccttctttctatcatccctcc 573 |||||| | ||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 78818 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 78876 Query: 574 ctttatccacat-ccctttagttttgcttcacaacctanaatcc 616 |||||| |||| |||||||||||||||||||||| || ||||| Sbjct: 78877 ttttatctacatcccctttagttttgcttcacaacttagaatcc 78920 Score = 54.0 bits (27), Expect = 6e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Plus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 ||||| ||||||||||||||| || |||||| || |||||||||| |||||||||||| Sbjct: 78301 aaagaggatctagaatatatctag-atgtgtatgtttatttatctatattctatattta 78358
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 579 bits (292), Expect = e-162 Identities = 467/524 (89%), Gaps = 7/524 (1%) Strand = Plus / Plus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 54462 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 54521 Query: 158 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 217 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 54522 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 54581 Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 54582 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 54641 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 54642 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 54701 Query: 338 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 397 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 54702 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 54760 Query: 398 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 453 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 54761 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 54820 Query: 454 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 513 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 54821 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 54880 Query: 514 catacacagnggaattctatatcttatttatttcctcttccttctttctatcatccctcc 573 |||||| | ||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 54881 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 54939 Query: 574 ctttatccacat-ccctttagttttgcttcacaacctanaatcc 616 |||||| |||| |||||||||||||||||||||| || ||||| Sbjct: 54940 ttttatctacatcccctttagttttgcttcacaacttagaatcc 54983 Score = 54.0 bits (27), Expect = 6e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Plus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 ||||| ||||||||||||||| || |||||| || |||||||||| |||||||||||| Sbjct: 54368 aaagaggatctagaatatatctag-atgtgtatgtttatttatctatattctatattta 54425
>gb|AC134345.2| Oryza sativa (jpaonica cultivar-group) chromosome 5 PAC clone P0012A07, complete sequence Length = 136858 Score = 579 bits (292), Expect = e-162 Identities = 467/524 (89%), Gaps = 7/524 (1%) Strand = Plus / Plus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 127290 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 127349 Query: 158 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 217 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 127350 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 127409 Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 127410 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 127469 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 127470 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 127529 Query: 338 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 397 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 127530 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 127588 Query: 398 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 453 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 127589 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 127648 Query: 454 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 513 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 127649 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 127708 Query: 514 catacacagnggaattctatatcttatttatttcctcttccttctttctatcatccctcc 573 |||||| | ||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 127709 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 127767 Query: 574 ctttatccacat-ccctttagttttgcttcacaacctanaatcc 616 |||||| |||| |||||||||||||||||||||| || ||||| Sbjct: 127768 ttttatctacatcccctttagttttgcttcacaacttagaatcc 127811 Score = 54.0 bits (27), Expect = 6e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Plus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 ||||| ||||||||||||||| || |||||| || |||||||||| |||||||||||| Sbjct: 127196 aaagaggatctagaatatatctag-atgtgtatgtttatttatctatattctatattta 127253
>gb|DQ289153.1| Oryza glumipatula F ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1110 Score = 579 bits (292), Expect = e-162 Identities = 467/524 (89%), Gaps = 7/524 (1%) Strand = Plus / Minus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 760 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 701 Query: 158 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 217 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 700 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 641 Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 640 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 581 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 580 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 521 Query: 338 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 397 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 520 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 462 Query: 398 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 453 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 461 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 402 Query: 454 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 513 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 401 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 342 Query: 514 catacacagnggaattctatatcttatttatttcctcttccttctttctatcatccctcc 573 |||||| | ||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 341 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 283 Query: 574 ctttatccacat-ccctttagttttgcttcacaacctanaatcc 616 |||||| |||| |||||||||||||||||||||| || ||||| Sbjct: 282 ttttatctacatcccctttagttttgcttcacaacttagaatcc 239 Score = 54.0 bits (27), Expect = 6e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 ||||| ||||||||||||||| || |||||| || |||||||||| |||||||||||| Sbjct: 855 aaagaggatctagaatatatctag-atgtgtatgtttatttatctatattctatattta 798
>gb|DQ289152.1| Oryza glumipatula E ribosomal protein L16 (ribosomal protein L16) gene, partial cds; chloroplast Length = 1109 Score = 579 bits (292), Expect = e-162 Identities = 467/524 (89%), Gaps = 7/524 (1%) Strand = Plus / Minus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 759 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 700 Query: 158 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 217 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 699 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 640 Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 639 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 580 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 579 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 520 Query: 338 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 397 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 519 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 461 Query: 398 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 453 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 460 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 401 Query: 454 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 513 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 400 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 341 Query: 514 catacacagnggaattctatatcttatttatttcctcttccttctttctatcatccctcc 573 |||||| | ||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 340 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 282 Query: 574 ctttatccacat-ccctttagttttgcttcacaacctanaatcc 616 |||||| |||| |||||||||||||||||||||| || ||||| Sbjct: 281 ttttatctacatcccctttagttttgcttcacaacttagaatcc 238 Score = 54.0 bits (27), Expect = 6e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 ||||| ||||||||||||||| || |||||| || |||||||||| |||||||||||| Sbjct: 854 aaagaggatctagaatatatctag-atgtgtatgtttatttatctatattctatattta 797
>gb|DQ289151.1| Oryza meridionalis D ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1112 Score = 579 bits (292), Expect = e-162 Identities = 467/524 (89%), Gaps = 7/524 (1%) Strand = Plus / Minus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 759 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 700 Query: 158 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 217 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 699 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 640 Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 639 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 580 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 579 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 520 Query: 338 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 397 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 519 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 461 Query: 398 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 453 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 460 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 401 Query: 454 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 513 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 400 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 341 Query: 514 catacacagnggaattctatatcttatttatttcctcttccttctttctatcatccctcc 573 |||||| | ||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 340 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 282 Query: 574 ctttatccacat-ccctttagttttgcttcacaacctanaatcc 616 |||||| |||| |||||||||||||||||||||| || ||||| Sbjct: 281 ttttatctacatcccctttagttttgcttcacaacttagaatcc 238 Score = 54.0 bits (27), Expect = 6e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 ||||| ||||||||||||||| || |||||| || |||||||||| |||||||||||| Sbjct: 857 aaagaggatctagaatatatctag-atgtgtatgtttatttatctatattctatattta 800
>gb|DQ289150.1| Oryza barthii C ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1106 Score = 579 bits (292), Expect = e-162 Identities = 467/524 (89%), Gaps = 7/524 (1%) Strand = Plus / Minus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 758 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 699 Query: 158 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 217 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 698 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 639 Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 638 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 579 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 578 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 519 Query: 338 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 397 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 518 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 460 Query: 398 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 453 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 459 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 400 Query: 454 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 513 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 399 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 340 Query: 514 catacacagnggaattctatatcttatttatttcctcttccttctttctatcatccctcc 573 |||||| | ||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 339 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 281 Query: 574 ctttatccacat-ccctttagttttgcttcacaacctanaatcc 616 |||||| |||| |||||||||||||||||||||| || ||||| Sbjct: 280 ttttatctacatcccctttagttttgcttcacaacttagaatcc 237 Score = 54.0 bits (27), Expect = 6e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 ||||| ||||||||||||||| || |||||| || |||||||||| |||||||||||| Sbjct: 851 aaagaggatctagaatatatctag-atgtgtatgtttatttatctatattctatattta 794
>gb|DQ289148.1| Oryza sativa A ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1113 Score = 579 bits (292), Expect = e-162 Identities = 467/524 (89%), Gaps = 7/524 (1%) Strand = Plus / Minus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 759 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 700 Query: 158 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 217 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 699 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 640 Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 639 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 580 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 579 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 520 Query: 338 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 397 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 519 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 461 Query: 398 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 453 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 460 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 401 Query: 454 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 513 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 400 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 341 Query: 514 catacacagnggaattctatatcttatttatttcctcttccttctttctatcatccctcc 573 |||||| | ||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 340 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 282 Query: 574 ctttatccacat-ccctttagttttgcttcacaacctanaatcc 616 |||||| |||| |||||||||||||||||||||| || ||||| Sbjct: 281 ttttatctacatcccctttagttttgcttcacaacttagaatcc 238 Score = 54.0 bits (27), Expect = 6e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 ||||| ||||||||||||||| || |||||| || |||||||||| |||||||||||| Sbjct: 858 aaagaggatctagaatatatctag-atgtgtatgtttatttatctatattctatattta 801
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 579 bits (292), Expect = e-162 Identities = 467/524 (89%), Gaps = 7/524 (1%) Strand = Plus / Minus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 14455243 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 14455184 Query: 158 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 217 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 14455183 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 14455124 Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 14455123 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 14455064 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 14455063 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 14455004 Query: 338 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 397 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 14455003 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 14454945 Query: 398 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 453 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 14454944 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 14454885 Query: 454 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 513 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 14454884 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 14454825 Query: 514 catacacagnggaattctatatcttatttatttcctcttccttctttctatcatccctcc 573 |||||| | ||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 14454824 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 14454766 Query: 574 ctttatccacat-ccctttagttttgcttcacaacctanaatcc 616 |||||| |||| |||||||||||||||||||||| || ||||| Sbjct: 14454765 ttttatctacatcccctttagttttgcttcacaacttagaatcc 14454722 Score = 367 bits (185), Expect = 3e-98 Identities = 352/404 (87%), Gaps = 7/404 (1%) Strand = Plus / Minus Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 11895328 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 11895269 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | |||||||||||||||||||||| |||||||||| ||||||||||| | |||| | ||| Sbjct: 11895268 agtcataggttctgtcgttcccacggcttctcctttaatggttaggttttaatctcacaa 11895209 Query: 338 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 397 |||||||||||||||||||||||| ||| || |||||||||||||||||| |||| | Sbjct: 11895208 tggagcttccaaaaaatttctttccaagtcaa-tttctcagttttattaactcgggacac 11895150 Query: 398 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 453 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 11895149 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 11895090 Query: 454 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 513 | ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 11895089 ttgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 11895030 Query: 514 catacacagnggaattctatatcttatttatttcctcttccttctttctatcatccctcc 573 |||||| | ||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 11895029 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 11894971 Query: 574 ctttatccacat-ccctttagttttgcttcacaacctanaatcc 616 |||||| |||| |||||||||||||||||||||| || ||||| Sbjct: 11894970 ttttatctacatcccctttagttttgcttcacaacttagaatcc 11894927 Score = 165 bits (83), Expect = 2e-37 Identities = 86/87 (98%) Strand = Plus / Minus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 11895435 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 11895376 Query: 158 atttactctttcctgtcttatttgtta 184 ||||||||||||||||||||||||||| Sbjct: 11895375 atttactctttcctgtcttatttgtta 11895349 Score = 54.0 bits (27), Expect = 6e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 ||||| ||||||||||||||| || |||||| || |||||||||| |||||||||||| Sbjct: 14455336 aaagaggatctagaatatatctag-atgtgtatgtttatttatctatattctatattta 14455279 Score = 54.0 bits (27), Expect = 6e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 ||||| ||||||||||||||| || |||||| || |||||||||| |||||||||||| Sbjct: 11895525 aaagaggatctagaatatatctag-atgtgtatgtttatttatctatattctatattta 11895468
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 579 bits (292), Expect = e-162 Identities = 467/524 (89%), Gaps = 7/524 (1%) Strand = Plus / Minus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 9258613 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 9258554 Query: 158 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 217 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 9258553 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 9258494 Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 9258493 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 9258434 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 9258433 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 9258374 Query: 338 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 397 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 9258373 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 9258315 Query: 398 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 453 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 9258314 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 9258255 Query: 454 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 513 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 9258254 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 9258195 Query: 514 catacacagnggaattctatatcttatttatttcctcttccttctttctatcatccctcc 573 |||||| | ||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 9258194 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 9258136 Query: 574 ctttatccacat-ccctttagttttgcttcacaacctanaatcc 616 |||||| |||| |||||||||||||||||||||| || ||||| Sbjct: 9258135 ttttatctacatcccctttagttttgcttcacaacttagaatcc 9258092 Score = 54.0 bits (27), Expect = 6e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 ||||| ||||||||||||||| || |||||| || |||||||||| |||||||||||| Sbjct: 9258704 aaagaggatctagaatatatctag-atgtgtatgtttatttatctatattctatattta 9258647
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 579 bits (292), Expect = e-162 Identities = 467/524 (89%), Gaps = 7/524 (1%) Strand = Plus / Plus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 12757003 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 12757062 Query: 158 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 217 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 12757063 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 12757122 Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 12757123 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 12757182 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 12757183 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 12757242 Query: 338 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 397 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 12757243 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 12757301 Query: 398 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 453 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 12757302 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 12757361 Query: 454 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 513 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 12757362 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 12757421 Query: 514 catacacagnggaattctatatcttatttatttcctcttccttctttctatcatccctcc 573 |||||| | ||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 12757422 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 12757480 Query: 574 ctttatccacat-ccctttagttttgcttcacaacctanaatcc 616 |||||| |||| |||||||||||||||||||||| || ||||| Sbjct: 12757481 ttttatctacatcccctttagttttgcttcacaacttagaatcc 12757524 Score = 502 bits (253), Expect = e-139 Identities = 460/525 (87%), Gaps = 9/525 (1%) Strand = Plus / Minus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 19544581 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 19544522 Query: 158 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 217 |||||||||||| ||||||||||||||||| |||| |||| |||||||||||| Sbjct: 19544521 atttactctttcatgtcttatttgttaattcataaccttatcaaataagacaattttttt 19544462 Query: 218 -ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatg 276 |||||||||||||||||||||||||||||| || ||||| ||||||| |||||||||| Sbjct: 19544461 tggtttgttccgccatcccacccaatgaagtattgggatttttttcaagaaaatcctatc 19544402 Query: 277 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 336 | |||||||||||||| |||||||||||||||||| ||||||||||| |||||| |||| Sbjct: 19544401 cagtcataggttctgtcattcccactgcttctcctttaatggttaggtttgaatctcgca 19544342 Query: 337 acggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcgg 396 | |||||||||||||||||||||||||||| || |||||||| ||||||||| | || | Sbjct: 19544341 atggagcttccaaaaaatttctttccgagtcaa-tttctcag-tttattaactcaggacg 19544284 Query: 397 ctctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattc 452 |||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| |||| Sbjct: 19544283 ctctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattc 19544224 Query: 453 tctattagttttattatattgatgctttttcacattgccttttatgatgtaattcataga 512 | | ||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 19544223 tttgttatttttattatattgatgctttatcacattgctttttatgatgtaattcataga 19544164 Query: 513 ccatacacagnggaattctatatcttatttatttcctcttccttctttctatcatccctc 572 ||||||| | ||||| ||||||||| | | ||| |||||||||||||||||||||| || Sbjct: 19544163 ccatacatattggaatcctatatctt-tcttttttctcttccttctttctatcatccttc 19544105 Query: 573 cctttatccacat-ccctttagttttgcttcacaacctanaatcc 616 | |||||| |||| |||||||||||||||||||||| || ||||| Sbjct: 19544104 cttttatctacatcccctttagttttgcttcacaacttagaatcc 19544060 Score = 56.0 bits (28), Expect = 1e-04 Identities = 53/60 (88%), Gaps = 1/60 (1%) Strand = Plus / Minus Query: 1 aaaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 |||||| ||||||||||||||| || |||||| || |||||||||| |||||||||||| Sbjct: 19544672 aaaagaggatctagaatatatctag-atgtgtatgtttatttatctatattctatattta 19544614 Score = 54.0 bits (27), Expect = 6e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Plus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 ||||| ||||||||||||||| || |||||| || |||||||||| |||||||||||| Sbjct: 12756909 aaagaggatctagaatatatctag-atgtgtatgtttatttatctatattctatattta 12756966
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 579 bits (292), Expect = e-162 Identities = 467/524 (89%), Gaps = 7/524 (1%) Strand = Plus / Minus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 69826 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 69767 Query: 158 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 217 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 69766 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 69707 Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 69706 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 69647 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 69646 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 69587 Query: 338 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 397 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 69586 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 69528 Query: 398 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 453 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 69527 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 69468 Query: 454 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 513 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 69467 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 69408 Query: 514 catacacagnggaattctatatcttatttatttcctcttccttctttctatcatccctcc 573 |||||| | ||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 69407 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 69349 Query: 574 ctttatccacat-ccctttagttttgcttcacaacctanaatcc 616 |||||| |||| |||||||||||||||||||||| || ||||| Sbjct: 69348 ttttatctacatcccctttagttttgcttcacaacttagaatcc 69305 Score = 54.0 bits (27), Expect = 6e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 ||||| ||||||||||||||| || |||||| || |||||||||| |||||||||||| Sbjct: 69917 aaagaggatctagaatatatctag-atgtgtatgtttatttatctatattctatattta 69860
>dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0465E03 Length = 151206 Score = 579 bits (292), Expect = e-162 Identities = 467/524 (89%), Gaps = 7/524 (1%) Strand = Plus / Minus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 147046 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 146987 Query: 158 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 217 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 146986 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 146927 Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 146926 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 146867 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 146866 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 146807 Query: 338 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 397 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 146806 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 146748 Query: 398 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 453 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 146747 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 146688 Query: 454 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 513 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 146687 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 146628 Query: 514 catacacagnggaattctatatcttatttatttcctcttccttctttctatcatccctcc 573 |||||| | ||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 146627 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 146569 Query: 574 ctttatccacat-ccctttagttttgcttcacaacctanaatcc 616 |||||| |||| |||||||||||||||||||||| || ||||| Sbjct: 146568 ttttatctacatcccctttagttttgcttcacaacttagaatcc 146525 Score = 54.0 bits (27), Expect = 6e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 ||||| ||||||||||||||| || |||||| || |||||||||| |||||||||||| Sbjct: 147139 aaagaggatctagaatatatctag-atgtgtatgtttatttatctatattctatattta 147082
>dbj|AP005683.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1585_D02 Length = 103172 Score = 579 bits (292), Expect = e-162 Identities = 467/524 (89%), Gaps = 7/524 (1%) Strand = Plus / Minus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 54808 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 54749 Query: 158 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 217 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 54748 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 54689 Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 54688 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 54629 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 54628 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 54569 Query: 338 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 397 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 54568 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 54510 Query: 398 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 453 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 54509 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 54450 Query: 454 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 513 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 54449 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 54390 Query: 514 catacacagnggaattctatatcttatttatttcctcttccttctttctatcatccctcc 573 |||||| | ||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 54389 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 54331 Query: 574 ctttatccacat-ccctttagttttgcttcacaacctanaatcc 616 |||||| |||| |||||||||||||||||||||| || ||||| Sbjct: 54330 ttttatctacatcccctttagttttgcttcacaacttagaatcc 54287 Score = 54.0 bits (27), Expect = 6e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 ||||| ||||||||||||||| || |||||| || |||||||||| |||||||||||| Sbjct: 54901 aaagaggatctagaatatatctag-atgtgtatgtttatttatctatattctatattta 54844
>dbj|AK072149.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128P04, full insert sequence Length = 2475 Score = 579 bits (292), Expect = e-162 Identities = 467/524 (89%), Gaps = 7/524 (1%) Strand = Plus / Minus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 2460 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 2401 Query: 158 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 217 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 2400 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 2341 Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 2340 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 2281 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 2280 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 2221 Query: 338 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 397 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 2220 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 2162 Query: 398 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 453 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 2161 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 2102 Query: 454 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 513 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 2101 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 2042 Query: 514 catacacagnggaattctatatcttatttatttcctcttccttctttctatcatccctcc 573 |||||| | ||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 2041 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 1983 Query: 574 ctttatccacat-ccctttagttttgcttcacaacctanaatcc 616 |||||| |||| |||||||||||||||||||||| || ||||| Sbjct: 1982 ttttatctacatcccctttagttttgcttcacaacttagaatcc 1939
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 579 bits (292), Expect = e-162 Identities = 467/524 (89%), Gaps = 7/524 (1%) Strand = Plus / Plus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 78396 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 78455 Query: 158 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 217 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 78456 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 78515 Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 78516 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 78575 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 78576 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 78635 Query: 338 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 397 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 78636 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 78694 Query: 398 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 453 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 78695 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 78754 Query: 454 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 513 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 78755 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 78814 Query: 514 catacacagnggaattctatatcttatttatttcctcttccttctttctatcatccctcc 573 |||||| | ||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 78815 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 78873 Query: 574 ctttatccacat-ccctttagttttgcttcacaacctanaatcc 616 |||||| |||| |||||||||||||||||||||| || ||||| Sbjct: 78874 ttttatctacatcccctttagttttgcttcacaacttagaatcc 78917 Score = 54.0 bits (27), Expect = 6e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Plus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 ||||| ||||||||||||||| || |||||| || |||||||||| |||||||||||| Sbjct: 78301 aaagaggatctagaatatatctag-atgtgtatgtttatttatctatattctatattta 78358
>gb|AY847095.1| Megastachya mucronata ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1154 Score = 571 bits (288), Expect = e-159 Identities = 469/529 (88%), Gaps = 5/529 (0%) Strand = Plus / Minus Query: 91 tccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcg 150 ||||| |||||| ||||||||||||| | |||||||||||||| |||||| |||||||| Sbjct: 748 tccttttttttattcttattgaatcgtg-taaagtattctaatccaataaagatttcgcg 690 Query: 151 ggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaa 210 ||||||||||||||||||||||||||||||||||||||| || |||||||||||| |||| Sbjct: 689 ggcgaatatttactctttcctgtcttatttgttaatttaaaaccttaccaaataaaacaa 630 Query: 211 nnnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaat 270 |||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 629 tttttttggtttgttccgccatcccacccaatgaagtattaggattcttttcaataaaat 570 Query: 271 cctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaat 330 |||||| | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||| Sbjct: 569 cctatgcagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaat 510 Query: 331 cccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaaccc 390 || |||| |||||||||||||||||| ||||||||| |||||||||||||||||||| || Sbjct: 509 cctgcaatggagcttccaaaaaatttatttccgagtcaattttctcagttttattaatcc 450 Query: 391 gggcggctctttattattgcttaaaatttgtagttcttctttcaagttacaatttttcat 450 ||| ||||||| ||||||||| |||||| || || || ||| ||||||| |||| || Sbjct: 449 cggctgctcttttttattgctttaaatttttatttattgtttgaagttacgatttcgaat 390 Query: 451 tctctattagtttt---attatattgatgctttttcacattgccttttatgatgtaattc 507 ||||| || |||| |||||||||||||||| |||||||||||||||||||||||||| Sbjct: 389 tctctcttttttttataattatattgatgctttatcacattgccttttatgatgtaattc 330 Query: 508 atagaccatacacagnggaattctatatcttatttatttcctcttccttctttctatcat 567 |||||||||||||| ||||| ||||||||| ||| ||| | |||||||| |||||||| Sbjct: 329 atagaccatacacattggaatcctatatctttctta-ttctttttccttctatctatcat 271 Query: 568 ccctccctttatccacatccctttagttttgcttcacaacctanaatcc 616 |||||| |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 270 ccctccttttatccacatccctttagttttgcttcacaacctagaatcc 222
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 571 bits (288), Expect = e-159 Identities = 466/524 (88%), Gaps = 7/524 (1%) Strand = Plus / Minus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 72298 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 72239 Query: 158 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 217 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 72238 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 72179 Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 72178 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 72119 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 72118 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 72059 Query: 338 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 397 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 72058 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 72000 Query: 398 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 453 ||||| ||||| ||| ||||||||| ||||| || |||| |||| | || ||||| Sbjct: 71999 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgacttcgaattct 71940 Query: 454 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 513 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 71939 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 71880 Query: 514 catacacagnggaattctatatcttatttatttcctcttccttctttctatcatccctcc 573 |||||| | ||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 71879 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 71821 Query: 574 ctttatccacat-ccctttagttttgcttcacaacctanaatcc 616 |||||| |||| |||||||||||||||||||||| || ||||| Sbjct: 71820 ttttatctacatcccctttagttttgcttcacaacttagaatcc 71777 Score = 54.0 bits (27), Expect = 6e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 ||||| ||||||||||||||| || |||||| || |||||||||| |||||||||||| Sbjct: 72395 aaagaggatctagaatatatctag-atgtgtatgtttatttatctatattctatattta 72338
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 571 bits (288), Expect = e-159 Identities = 466/524 (88%), Gaps = 7/524 (1%) Strand = Plus / Plus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 76638 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 76697 Query: 158 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 217 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 76698 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 76757 Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 76758 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 76817 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 76818 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 76877 Query: 338 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 397 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 76878 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 76936 Query: 398 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 453 ||||| ||||| ||| ||||||||| ||||| || |||| |||| | || ||||| Sbjct: 76937 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgacttcgaattct 76996 Query: 454 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 513 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 76997 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 77056 Query: 514 catacacagnggaattctatatcttatttatttcctcttccttctttctatcatccctcc 573 |||||| | ||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 77057 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 77115 Query: 574 ctttatccacat-ccctttagttttgcttcacaacctanaatcc 616 |||||| |||| |||||||||||||||||||||| || ||||| Sbjct: 77116 ttttatctacatcccctttagttttgcttcacaacttagaatcc 77159 Score = 54.0 bits (27), Expect = 6e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Plus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 ||||| ||||||||||||||| || |||||| || |||||||||| |||||||||||| Sbjct: 76546 aaagaggatctagaatatatctag-atgtgtatgtttatttatctatattctatattta 76603
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 571 bits (288), Expect = e-159 Identities = 466/524 (88%), Gaps = 7/524 (1%) Strand = Plus / Plus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 10702 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 10761 Query: 158 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 217 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 10762 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 10821 Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 10822 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 10881 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 10882 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 10941 Query: 338 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 397 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 10942 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 11000 Query: 398 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 453 ||||| ||||| ||| ||||||||| ||||| || |||| |||| | || ||||| Sbjct: 11001 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgacttcgaattct 11060 Query: 454 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 513 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 11061 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 11120 Query: 514 catacacagnggaattctatatcttatttatttcctcttccttctttctatcatccctcc 573 |||||| | ||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 11121 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 11179 Query: 574 ctttatccacat-ccctttagttttgcttcacaacctanaatcc 616 |||||| |||| |||||||||||||||||||||| || ||||| Sbjct: 11180 ttttatctacatcccctttagttttgcttcacaacttagaatcc 11223 Score = 54.0 bits (27), Expect = 6e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Plus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 ||||| ||||||||||||||| || |||||| || |||||||||| |||||||||||| Sbjct: 10610 aaagaggatctagaatatatctag-atgtgtatgtttatttatctatattctatattta 10667
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 571 bits (288), Expect = e-159 Identities = 466/524 (88%), Gaps = 7/524 (1%) Strand = Plus / Minus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 9191225 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 9191166 Query: 158 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 217 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 9191165 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 9191106 Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 9191105 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 9191046 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 9191045 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 9190986 Query: 338 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 397 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 9190985 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 9190927 Query: 398 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 453 ||||| ||||| ||| ||||||||| ||||| || |||| |||| | || ||||| Sbjct: 9190926 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgacttcgaattct 9190867 Query: 454 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 513 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 9190866 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 9190807 Query: 514 catacacagnggaattctatatcttatttatttcctcttccttctttctatcatccctcc 573 |||||| | ||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 9190806 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 9190748 Query: 574 ctttatccacat-ccctttagttttgcttcacaacctanaatcc 616 |||||| |||| |||||||||||||||||||||| || ||||| Sbjct: 9190747 ttttatctacatcccctttagttttgcttcacaacttagaatcc 9190704 Score = 571 bits (288), Expect = e-159 Identities = 466/524 (88%), Gaps = 7/524 (1%) Strand = Plus / Minus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 9114272 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 9114213 Query: 158 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 217 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 9114212 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 9114153 Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 9114152 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 9114093 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 9114092 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 9114033 Query: 338 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 397 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 9114032 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 9113974 Query: 398 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 453 ||||| ||||| ||| ||||||||| ||||| || |||| |||| | || ||||| Sbjct: 9113973 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgacttcgaattct 9113914 Query: 454 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 513 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 9113913 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 9113854 Query: 514 catacacagnggaattctatatcttatttatttcctcttccttctttctatcatccctcc 573 |||||| | ||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 9113853 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 9113795 Query: 574 ctttatccacat-ccctttagttttgcttcacaacctanaatcc 616 |||||| |||| |||||||||||||||||||||| || ||||| Sbjct: 9113794 ttttatctacatcccctttagttttgcttcacaacttagaatcc 9113751 Score = 54.0 bits (27), Expect = 6e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 ||||| ||||||||||||||| || |||||| || |||||||||| |||||||||||| Sbjct: 9191322 aaagaggatctagaatatatctag-atgtgtatgtttatttatctatattctatattta 9191265 Score = 54.0 bits (27), Expect = 6e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 ||||| ||||||||||||||| || |||||| || |||||||||| |||||||||||| Sbjct: 9114369 aaagaggatctagaatatatctag-atgtgtatgtttatttatctatattctatattta 9114312
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 571 bits (288), Expect = e-159 Identities = 466/524 (88%), Gaps = 7/524 (1%) Strand = Plus / Plus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 10370246 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 10370305 Query: 158 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 217 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 10370306 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 10370365 Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 10370366 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 10370425 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 10370426 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 10370485 Query: 338 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 397 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 10370486 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 10370544 Query: 398 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 453 ||||| ||||| ||| ||||||||| ||||| || |||| |||| | || ||||| Sbjct: 10370545 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgacttcgaattct 10370604 Query: 454 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 513 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 10370605 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 10370664 Query: 514 catacacagnggaattctatatcttatttatttcctcttccttctttctatcatccctcc 573 |||||| | ||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 10370665 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 10370723 Query: 574 ctttatccacat-ccctttagttttgcttcacaacctanaatcc 616 |||||| |||| |||||||||||||||||||||| || ||||| Sbjct: 10370724 ttttatctacatcccctttagttttgcttcacaacttagaatcc 10370767 Score = 54.0 bits (27), Expect = 6e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Plus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 ||||| ||||||||||||||| || |||||| || |||||||||| |||||||||||| Sbjct: 10370154 aaagaggatctagaatatatctag-atgtgtatgtttatttatctatattctatattta 10370211
>dbj|AK058501.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-F04, full insert sequence Length = 547 Score = 571 bits (288), Expect = e-159 Identities = 466/524 (88%), Gaps = 7/524 (1%) Strand = Plus / Minus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 532 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 473 Query: 158 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 217 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 472 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 413 Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 412 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 353 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 352 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 293 Query: 338 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 397 |||||||||||||||||||||||||||| || ||||||||||||| |||| |||| || Sbjct: 292 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttactaactcgggacgc 234 Query: 398 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 453 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 233 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 174 Query: 454 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 513 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 173 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 114 Query: 514 catacacagnggaattctatatcttatttatttcctcttccttctttctatcatccctcc 573 |||||| | ||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 113 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 55 Query: 574 ctttatccacat-ccctttagttttgcttcacaacctanaatcc 616 |||||| |||| |||||||||||||||||||||| || ||||| Sbjct: 54 ttttatctacatcccctttagttttgcttcacaacttagaatcc 11
>gb|DQ289149.1| Oryza sativa ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1103 Score = 571 bits (288), Expect = e-159 Identities = 466/524 (88%), Gaps = 7/524 (1%) Strand = Plus / Minus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 758 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 699 Query: 158 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 217 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 698 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 639 Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 638 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 579 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 578 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 519 Query: 338 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 397 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 518 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 460 Query: 398 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 453 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||| | Sbjct: 459 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattat 400 Query: 454 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 513 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 399 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 340 Query: 514 catacacagnggaattctatatcttatttatttcctcttccttctttctatcatccctcc 573 |||||| | ||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 339 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 281 Query: 574 ctttatccacat-ccctttagttttgcttcacaacctanaatcc 616 |||||| |||| |||||||||||||||||||||| || ||||| Sbjct: 280 ttttatctacatcccctttagttttgcttcacaacttagaatcc 237 Score = 54.0 bits (27), Expect = 6e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 ||||| ||||||||||||||| || |||||| || |||||||||| |||||||||||| Sbjct: 848 aaagaggatctagaatatatctag-atgtgtatgtttatttatctatattctatattta 791
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 571 bits (288), Expect = e-159 Identities = 466/524 (88%), Gaps = 7/524 (1%) Strand = Plus / Plus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 10376285 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 10376344 Query: 158 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 217 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 10376345 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 10376404 Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 10376405 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 10376464 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 10376465 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 10376524 Query: 338 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 397 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 10376525 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 10376583 Query: 398 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 453 ||||| ||||| ||| ||||||||| ||||| || |||| |||| | || ||||| Sbjct: 10376584 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgacttcgaattct 10376643 Query: 454 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 513 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 10376644 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 10376703 Query: 514 catacacagnggaattctatatcttatttatttcctcttccttctttctatcatccctcc 573 |||||| | ||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 10376704 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 10376762 Query: 574 ctttatccacat-ccctttagttttgcttcacaacctanaatcc 616 |||||| |||| |||||||||||||||||||||| || ||||| Sbjct: 10376763 ttttatctacatcccctttagttttgcttcacaacttagaatcc 10376806 Score = 54.0 bits (27), Expect = 6e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Plus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 ||||| ||||||||||||||| || |||||| || |||||||||| |||||||||||| Sbjct: 10376193 aaagaggatctagaatatatctag-atgtgtatgtttatttatctatattctatattta 10376250
>gb|DQ289158.1| Oryza australiensis k ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1117 Score = 569 bits (287), Expect = e-159 Identities = 464/523 (88%), Gaps = 6/523 (1%) Strand = Plus / Minus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| Sbjct: 769 ttttactcttattgaatcgcggtaaagtattttaattcaataaaaatttcgcgggcgaat 710 Query: 158 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 217 |||||||||||||||||||||||||||||| |||| |||| |||||||| ||| Sbjct: 709 atttactctttcctgtcttatttgttaattcataaccttatcaaataaggcaattttttt 650 Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 649 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 590 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | ||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||| Sbjct: 589 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatttcgcaa 530 Query: 338 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 397 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 529 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 471 Query: 398 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 453 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 470 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 411 Query: 454 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 513 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 410 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 351 Query: 514 catacacagnggaattctatatcttatttatttcctcttccttctttctatcatccctcc 573 |||||| | ||||| ||||||||| |||||| ||||||||| |||||||||||| ||| Sbjct: 350 catacatattggaatcctatatctttcttattt-ctcttccttgtttctatcatccttcc 292 Query: 574 ctttatccacatccctttagttttgcttcacaacctanaatcc 616 ||||||||||||||||||||||||||||||||| || ||||| Sbjct: 291 ttttatccacatccctttagttttgcttcacaacttagaatcc 249 Score = 54.0 bits (27), Expect = 6e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 ||||| ||||||||||||||| || |||||| || |||||||||| |||||||||||| Sbjct: 862 aaagaggatctagaatatatctag-atgtgtatgtttatttatctatattctatattta 805
>ref|XM_479425.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2380 Score = 563 bits (284), Expect = e-157 Identities = 465/524 (88%), Gaps = 7/524 (1%) Strand = Plus / Minus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 2366 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 2307 Query: 158 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 217 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 2306 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 2247 Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 2246 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 2187 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 2186 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 2127 Query: 338 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 397 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| | Sbjct: 2126 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggactc 2068 Query: 398 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 453 ||||| ||||| ||| |||||| || ||||| || |||| |||| |||| ||||| Sbjct: 2067 tctttgttattccttgaaatttttatttcttgtttcaatcaaattacgatttcgaattct 2008 Query: 454 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 513 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 2007 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 1948 Query: 514 catacacagnggaattctatatcttatttatttcctcttccttctttctatcatccctcc 573 |||||| | ||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 1947 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 1889 Query: 574 ctttatccacat-ccctttagttttgcttcacaacctanaatcc 616 |||||| |||| |||||||||||||||||||||| || ||||| Sbjct: 1888 ttttatctacatcccctttagttttgcttcacaacttagaatcc 1845
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 563 bits (284), Expect = e-157 Identities = 466/524 (88%), Gaps = 8/524 (1%) Strand = Plus / Plus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 78444 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 78503 Query: 158 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 217 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 78504 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 78563 Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 78564 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 78623 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 78624 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 78683 Query: 338 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 397 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 78684 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 78742 Query: 398 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 453 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 78743 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 78802 Query: 454 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 513 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 78803 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 78862 Query: 514 catacacagnggaattctatatcttatttatttcctcttccttctttctatcatccctcc 573 |||||| | |||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 78863 catacata-ttgaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 78920 Query: 574 ctttatccacat-ccctttagttttgcttcacaacctanaatcc 616 |||||| |||| |||||||||||||||||||||| || ||||| Sbjct: 78921 ttttatctacatcccctttagttttgcttcacaacttagaatcc 78964 Score = 54.0 bits (27), Expect = 6e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Plus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 ||||| ||||||||||||||| || |||||| || |||||||||| |||||||||||| Sbjct: 78345 aaagaggatctagaatatatctag-atgtgtatgtttatttatctatattctatattta 78402
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 563 bits (284), Expect = e-157 Identities = 465/524 (88%), Gaps = 7/524 (1%) Strand = Plus / Plus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 27923930 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 27923989 Query: 158 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 217 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 27923990 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 27924049 Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 27924050 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 27924109 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 27924110 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 27924169 Query: 338 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 397 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| | Sbjct: 27924170 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggactc 27924228 Query: 398 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 453 ||||| ||||| ||| |||||| || ||||| || |||| |||| |||| ||||| Sbjct: 27924229 tctttgttattccttgaaatttttatttcttgtttcaatcaaattacgatttcgaattct 27924288 Query: 454 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 513 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 27924289 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 27924348 Query: 514 catacacagnggaattctatatcttatttatttcctcttccttctttctatcatccctcc 573 |||||| | ||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 27924349 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 27924407 Query: 574 ctttatccacat-ccctttagttttgcttcacaacctanaatcc 616 |||||| |||| |||||||||||||||||||||| || ||||| Sbjct: 27924408 ttttatctacatcccctttagttttgcttcacaacttagaatcc 27924451 Score = 54.0 bits (27), Expect = 6e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Plus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 ||||| ||||||||||||||| || |||||| || |||||||||| |||||||||||| Sbjct: 27923840 aaagaggatctagaatatatctag-atgtgtatgtttatttatctatattctatattta 27923897
>gb|AF133462.1|AF133462 Pariana radiciflora ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1262 Score = 563 bits (284), Expect = e-157 Identities = 478/538 (88%), Gaps = 11/538 (2%) Strand = Plus / Minus Query: 83 aaaaaatatccttatttttactcttattgaatcgcggtaaagtattct--aattc--aat 138 ||||||| ||||||||| ||||||||||||||||||||||||||||| ||||| ||| Sbjct: 787 aaaaaatctccttatttg-actcttattgaatcgcggtaaagtattctttaattcttaat 729 Query: 139 aagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatttataaacttac 198 ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 728 aaggatttcgcgggcgaatatttactctttcctgtcttatttgttaatttataacctta- 670 Query: 199 caaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattct 258 |||||| ||| |||||||||||||||||||||||||||||| |||| ||||| Sbjct: 669 --aataagncaatttttttggtttgttccgccatcccacccaatgaagtattagaattct 612 Query: 259 tttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatgg 318 || ||| ||||||||||| | ||||||| ||| ||||||||||| ||||||||| ||||| Sbjct: 611 ttccaaaaaaatcctatgcagtcataggctctatcgttcccactacttctcctttaatgg 552 Query: 319 ttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctcag 378 ||||||||||||||| ||| ||||||| |||||||||||||||||||| ||||||||||| Sbjct: 551 ttaggtctgaatcccacaatggagctttcaaaaaatttctttccgagtcaattttctcag 492 Query: 379 ttttattaacccgggcggctctttattattgcttaaaatttgtagttcttctttcaagtt 438 |||| |||||||| || ||||||||||||||||| ||||||||| ||||| ||||||||| Sbjct: 491 tttttttaacccgagctgctctttattattgcttcaaatttgtatttcttgtttcaagtt 432 Query: 439 acaatttttcattctctattagttttattatattgatgctttttcacattgccttttatg 498 || |||| ||||||||||| |||| ||||||||||||||| | ||||||||||||||| Sbjct: 431 acgatttcaaattctctattattttt-ttatattgatgctttattacattgccttttatg 373 Query: 499 atgtaattcatagaccatacacagnggaattctatatcttatttatttcctcttccttct 558 |||||| |||||||||||||| | ||||| ||||||||| ||||| ||||||| |||| Sbjct: 372 atgtaactcatagaccatacatattggaatcctatatctttcttatt-cctcttctttct 314 Query: 559 ttctatcatccctccctttatccacatccctttagttttgcttcacaacctanaatcc 616 ||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||| Sbjct: 313 ttctatcatccctccttttatccacatcc-tttagttttgcttcacaacctagaatcc 257 Score = 79.8 bits (40), Expect = 1e-11 Identities = 62/68 (91%), Gaps = 1/68 (1%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || |||| |||| |||||||||| ||||||||||||| Sbjct: 873 aaagaagatctagaatatatctag-atgtctgtgtctatttatctatattctatatttat 815 Query: 62 agataata 69 |||||||| Sbjct: 814 agataata 807
>dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453E03 Length = 159980 Score = 563 bits (284), Expect = e-157 Identities = 465/524 (88%), Gaps = 7/524 (1%) Strand = Plus / Plus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 87288 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 87347 Query: 158 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 217 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 87348 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 87407 Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 87408 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 87467 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 87468 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 87527 Query: 338 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 397 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| | Sbjct: 87528 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggactc 87586 Query: 398 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 453 ||||| ||||| ||| |||||| || ||||| || |||| |||| |||| ||||| Sbjct: 87587 tctttgttattccttgaaatttttatttcttgtttcaatcaaattacgatttcgaattct 87646 Query: 454 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 513 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 87647 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 87706 Query: 514 catacacagnggaattctatatcttatttatttcctcttccttctttctatcatccctcc 573 |||||| | ||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 87707 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 87765 Query: 574 ctttatccacat-ccctttagttttgcttcacaacctanaatcc 616 |||||| |||| |||||||||||||||||||||| || ||||| Sbjct: 87766 ttttatctacatcccctttagttttgcttcacaacttagaatcc 87809 Score = 54.0 bits (27), Expect = 6e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Plus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 ||||| ||||||||||||||| || |||||| || |||||||||| |||||||||||| Sbjct: 87198 aaagaggatctagaatatatctag-atgtgtatgtttatttatctatattctatattta 87255
>dbj|AP003825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1343_D04 Length = 143407 Score = 563 bits (284), Expect = e-157 Identities = 465/524 (88%), Gaps = 7/524 (1%) Strand = Plus / Plus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 13264 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 13323 Query: 158 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 217 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 13324 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 13383 Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 13384 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 13443 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 13444 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 13503 Query: 338 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 397 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| | Sbjct: 13504 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggactc 13562 Query: 398 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 453 ||||| ||||| ||| |||||| || ||||| || |||| |||| |||| ||||| Sbjct: 13563 tctttgttattccttgaaatttttatttcttgtttcaatcaaattacgatttcgaattct 13622 Query: 454 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 513 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 13623 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 13682 Query: 514 catacacagnggaattctatatcttatttatttcctcttccttctttctatcatccctcc 573 |||||| | ||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 13683 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 13741 Query: 574 ctttatccacat-ccctttagttttgcttcacaacctanaatcc 616 |||||| |||| |||||||||||||||||||||| || ||||| Sbjct: 13742 ttttatctacatcccctttagttttgcttcacaacttagaatcc 13785 Score = 54.0 bits (27), Expect = 6e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Plus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 ||||| ||||||||||||||| || |||||| || |||||||||| |||||||||||| Sbjct: 13174 aaagaggatctagaatatatctag-atgtgtatgtttatttatctatattctatattta 13231
>gb|U54740.1|PRU54740 Pariana radiciflora ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1102 Score = 563 bits (284), Expect = e-157 Identities = 478/538 (88%), Gaps = 11/538 (2%) Strand = Plus / Minus Query: 83 aaaaaatatccttatttttactcttattgaatcgcggtaaagtattct--aattc--aat 138 ||||||| ||||||||| ||||||||||||||||||||||||||||| ||||| ||| Sbjct: 764 aaaaaatctccttatttg-actcttattgaatcgcggtaaagtattctttaattcttaat 706 Query: 139 aagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatttataaacttac 198 ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 705 aaggatttcgcgggcgaatatttactctttcctgtcttatttgttaatttataacctta- 647 Query: 199 caaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattct 258 |||||| ||| |||||||||||||||||||||||||||||| |||| ||||| Sbjct: 646 --aataagncaatttttttggtttgttccgccatcccacccaatgaagtattagaattct 589 Query: 259 tttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatgg 318 || ||| ||||||||||| | ||||||| ||| ||||||||||| ||||||||| ||||| Sbjct: 588 ttccaaaaaaatcctatgcagtcataggctctatcgttcccactacttctcctttaatgg 529 Query: 319 ttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctcag 378 ||||||||||||||| ||| ||||||| |||||||||||||||||||| ||||||||||| Sbjct: 528 ttaggtctgaatcccacaatggagctttcaaaaaatttctttccgagtcaattttctcag 469 Query: 379 ttttattaacccgggcggctctttattattgcttaaaatttgtagttcttctttcaagtt 438 |||| |||||||| || ||||||||||||||||| ||||||||| ||||| ||||||||| Sbjct: 468 tttttttaacccgagctgctctttattattgcttcaaatttgtatttcttgtttcaagtt 409 Query: 439 acaatttttcattctctattagttttattatattgatgctttttcacattgccttttatg 498 || |||| ||||||||||| |||| ||||||||||||||| | ||||||||||||||| Sbjct: 408 acgatttcaaattctctatta-tttttttatattgatgctttattacattgccttttatg 350 Query: 499 atgtaattcatagaccatacacagnggaattctatatcttatttatttcctcttccttct 558 |||||| |||||||||||||| | ||||| ||||||||| ||| ||||||||| |||| Sbjct: 349 atgtaactcatagaccatacatattggaatcctatatctttctta-ttcctcttctttct 291 Query: 559 ttctatcatccctccctttatccacatccctttagttttgcttcacaacctanaatcc 616 ||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||| Sbjct: 290 ttctatcatccctccttttatccacat-cctttagttttgcttcacaacctagaatcc 234 Score = 79.8 bits (40), Expect = 1e-11 Identities = 62/68 (91%), Gaps = 1/68 (1%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || |||| |||| |||||||||| ||||||||||||| Sbjct: 850 aaagaagatctagaatatatctag-atgtctgtgtctatttatctatattctatatttat 792 Query: 62 agataata 69 |||||||| Sbjct: 791 agataata 784
>gb|DQ289159.1| Oryza granulata L ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1142 Score = 555 bits (280), Expect = e-155 Identities = 467/528 (88%), Gaps = 12/528 (2%) Strand = Plus / Minus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 764 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 705 Query: 158 atttactctttcctgtcttatttgttaatttataaacttaccaaa-----taagacaann 212 |||||||||||||||||||||||||||||| |||| |||| |||| |||| ||| Sbjct: 704 atttactctttcctgtcttatttgttaattcataaccttatcaaatcaaataaggcaatt 645 Query: 213 nnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcc 272 ||||||||||||||||||||| |||||||| || ||||||||||||| ||||||| Sbjct: 644 tttttggtttgttccgccatcccacc-aatgaagtattgggattcttttcaagaaaatcc 586 Query: 273 tatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcc 332 ||| | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 585 tatccagtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatct 526 Query: 333 cgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgg 392 ||||| |||||||||||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 525 cgcaatggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaacccgg 467 Query: 393 gcggctctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttc 448 | ||||||| ||||||||| ||||||||| ||||| || |||| |||| |||| Sbjct: 466 gacgctctttgttattgcttgaaatttgtatttcttgtttcaatcaaattacgatttcga 407 Query: 449 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 508 ||||||| ||| |||||||||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 406 attctctgttatttttattatattgatgctttatcacattgctttttatgatgtaattca 347 Query: 509 tagaccatacacagnggaattctatatcttatttatttcctcttccttctttctatcatc 568 ||||||||||| | ||||| ||||||||| |||||| ||||||||||||||||||||| Sbjct: 346 tagaccatacatattggaatcctatatctttcttattt-ctcttccttctttctatcatc 288 Query: 569 cctccctttatccacatccctttagttttgcttcacaacctanaatcc 616 | ||| ||||||||||||||||| ||||||||||||||| || ||||| Sbjct: 287 cttccttttatccacatcccttttgttttgcttcacaacttagaatcc 240 Score = 54.0 bits (27), Expect = 6e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 ||||||||||||||||||||| || ||||| || |||||||||| |||||||||||| Sbjct: 878 aaagaagatctagaatatatctag-gtgtgtatgtttatttatctatattctatattta 821
>gb|AF133463.1|AF133463 Sucrea maculata ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1190 Score = 551 bits (278), Expect = e-154 Identities = 468/532 (87%), Gaps = 8/532 (1%) Strand = Plus / Minus Query: 83 aaaaaatatccttatttttactcttattgaatcgcggtaaagtattctaattcaataaga 142 ||||||| ||||||||| |||||||||||||| | ||||||||||||||||||||||| Sbjct: 774 aaaaaatctccttatttg-actcttattgaatcacagtaaagtattctaattcaataagg 716 Query: 143 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaa 202 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 715 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttataaccttaccaaa 656 Query: 203 taagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttc 262 |||||||| ||||||||||||||||| |||||||||||| |||| || | Sbjct: 655 taagacaatttttttggtttgttccgccatcctacccaatgaagtattagaat------c 602 Query: 263 aataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatggttag 322 || | ||| ||||| | ||||||||||| ||||||||||| ||||||||| ||||||||| Sbjct: 601 aaaagaattctatgcagtcataggttctatcgttcccactacttctcctttaatggttag 542 Query: 323 gtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctcagtttt 382 ||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 541 gtctgaatcccacaatggagcttccaaaaaatttctttccgagtcaattttctcagtttt 482 Query: 383 attaacccgggcggctctttattattgcttaaaatttgtagttcttctttcaagttacaa 442 |||||| || | |||| |||||||||||| ||||||||| ||||| ||||||||||| | Sbjct: 481 attaactcgagttgctccttattattgctttaaatttgtatttcttgtttcaagttacga 422 Query: 443 tttttcattctctattagttttattatattgatgctttttcacattgccttttatgatgt 502 ||| ||||||||||| ||| |||||||||||||||| | ||||||||||||||||||| Sbjct: 421 tttcgaattctctattattttgattatattgatgctttattacattgccttttatgatgt 362 Query: 503 aattcatagaccatacacagnggaattctatatcttatttatttcctcttccttctttct 562 || ||||||||||||| || || | ||||||||| ||| ||||||||||| |||||| Sbjct: 361 aacccatagaccatacataggagagtcctatatctttctta-ttcctcttcctgctttct 303 Query: 563 atcatccctccctttatccacatccctttagttttgcttcacaacctanaat 614 ||||||||||| ||||||||||||| |||||||||||||||||||||| ||| Sbjct: 302 atcatccctccttttatccacatccttttagttttgcttcacaacctagaat 251 Score = 52.0 bits (26), Expect = 0.002 Identities = 42/46 (91%), Gaps = 1/46 (2%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatcta 47 ||||||||||||||||||||| || ||||||||| |||||||||| Sbjct: 848 aaagaagatctagaatatatctag-atgtgtgtgtctatttatcta 804
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 547 bits (276), Expect = e-152 Identities = 463/524 (88%), Gaps = 7/524 (1%) Strand = Plus / Minus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 23180661 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 23180602 Query: 158 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 217 |||||||||||||||||||||||||||||| |||| |||| | |||||||||| Sbjct: 23180601 atttactctttcctgtcttatttgttaattcataaccttatcgaataagacaattttttt 23180542 Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 23180541 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 23180482 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | | ||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 23180481 agtaataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 23180422 Query: 338 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 397 |||||||||||||||||||||||||||| || ||||||| |||||||||| |||| || Sbjct: 23180421 tggagcttccaaaaaatttctttccgagtcaa-tttctcacttttattaactcgggacgc 23180363 Query: 398 tctttattattgcttaaaatttgtagttc----ttctttcaagttacaatttttcattct 453 ||||| ||||| ||| ||||||||| ||| ||| |||| |||| |||| ||||| Sbjct: 23180362 tctttgttattccttgaaatttgtatttctcgtttcaatcaaattacgatttcgaattct 23180303 Query: 454 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 513 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 23180302 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 23180243 Query: 514 catacacagnggaattctatatcttatttatttcctcttccttctttctatcatccctcc 573 |||||| | ||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 23180242 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 23180184 Query: 574 ctttatccacat-ccctttagttttgcttcacaacctanaatcc 616 |||||| |||| |||||||||||||||||||||| || ||||| Sbjct: 23180183 ttttatctacatcccctttagttttgcttcacaacttagaatcc 23180140 Score = 54.0 bits (27), Expect = 6e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 ||||| ||||||||||||||| || |||||| || |||||||||| |||||||||||| Sbjct: 23180751 aaagaggatctagaatatatctag-atgtgtatgtttatttatctatattctatattta 23180694
>dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417D05 Length = 165752 Score = 547 bits (276), Expect = e-152 Identities = 463/524 (88%), Gaps = 7/524 (1%) Strand = Plus / Minus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 131309 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 131250 Query: 158 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 217 |||||||||||||||||||||||||||||| |||| |||| | |||||||||| Sbjct: 131249 atttactctttcctgtcttatttgttaattcataaccttatcgaataagacaattttttt 131190 Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 131189 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 131130 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | | ||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 131129 agtaataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 131070 Query: 338 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 397 |||||||||||||||||||||||||||| || ||||||| |||||||||| |||| || Sbjct: 131069 tggagcttccaaaaaatttctttccgagtcaa-tttctcacttttattaactcgggacgc 131011 Query: 398 tctttattattgcttaaaatttgtagttc----ttctttcaagttacaatttttcattct 453 ||||| ||||| ||| ||||||||| ||| ||| |||| |||| |||| ||||| Sbjct: 131010 tctttgttattccttgaaatttgtatttctcgtttcaatcaaattacgatttcgaattct 130951 Query: 454 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 513 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 130950 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 130891 Query: 514 catacacagnggaattctatatcttatttatttcctcttccttctttctatcatccctcc 573 |||||| | ||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 130890 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 130832 Query: 574 ctttatccacat-ccctttagttttgcttcacaacctanaatcc 616 |||||| |||| |||||||||||||||||||||| || ||||| Sbjct: 130831 ttttatctacatcccctttagttttgcttcacaacttagaatcc 130788 Score = 54.0 bits (27), Expect = 6e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 ||||| ||||||||||||||| || |||||| || |||||||||| |||||||||||| Sbjct: 131399 aaagaggatctagaatatatctag-atgtgtatgtttatttatctatattctatattta 131342
>dbj|AP003623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0642B07 Length = 139297 Score = 547 bits (276), Expect = e-152 Identities = 463/524 (88%), Gaps = 7/524 (1%) Strand = Plus / Minus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 15423 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 15364 Query: 158 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 217 |||||||||||||||||||||||||||||| |||| |||| | |||||||||| Sbjct: 15363 atttactctttcctgtcttatttgttaattcataaccttatcgaataagacaattttttt 15304 Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 15303 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 15244 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | | ||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 15243 agtaataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 15184 Query: 338 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 397 |||||||||||||||||||||||||||| || ||||||| |||||||||| |||| || Sbjct: 15183 tggagcttccaaaaaatttctttccgagtcaa-tttctcacttttattaactcgggacgc 15125 Query: 398 tctttattattgcttaaaatttgtagttc----ttctttcaagttacaatttttcattct 453 ||||| ||||| ||| ||||||||| ||| ||| |||| |||| |||| ||||| Sbjct: 15124 tctttgttattccttgaaatttgtatttctcgtttcaatcaaattacgatttcgaattct 15065 Query: 454 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 513 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 15064 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 15005 Query: 514 catacacagnggaattctatatcttatttatttcctcttccttctttctatcatccctcc 573 |||||| | ||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 15004 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 14946 Query: 574 ctttatccacat-ccctttagttttgcttcacaacctanaatcc 616 |||||| |||| |||||||||||||||||||||| || ||||| Sbjct: 14945 ttttatctacatcccctttagttttgcttcacaacttagaatcc 14902 Score = 54.0 bits (27), Expect = 6e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 ||||| ||||||||||||||| || |||||| || |||||||||| |||||||||||| Sbjct: 15513 aaagaggatctagaatatatctag-atgtgtatgtttatttatctatattctatattta 15456
>dbj|AK071967.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013084G06, full insert sequence Length = 1764 Score = 547 bits (276), Expect = e-152 Identities = 439/493 (89%), Gaps = 6/493 (1%) Strand = Plus / Minus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 491 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 432 Query: 158 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 217 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 431 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 372 Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 371 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 312 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 311 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 252 Query: 338 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 397 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 251 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 193 Query: 398 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 453 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 192 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 133 Query: 454 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 513 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 132 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 73 Query: 514 catacacagnggaattctatatcttatttatttcctcttccttctttctatcatccctcc 573 |||||| | ||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 72 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 14 Query: 574 ctttatccacatc 586 |||||| ||||| Sbjct: 13 ttttatctacatc 1 Score = 46.1 bits (23), Expect = 0.14 Identities = 51/59 (86%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 ||||| ||||||||||||||| || |||||| || ||| |||||| |||||||||||| Sbjct: 591 aaagaggatctagaatatatctag-atgtgtatgtttatctatctatattctatattta 534
>gb|AY847091.1| Gynerium sagittatum ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1184 Score = 545 bits (275), Expect = e-152 Identities = 467/532 (87%), Gaps = 14/532 (2%) Strand = Plus / Minus Query: 97 tttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaa 156 |||||| ||||||||||||| | |||||| ||||||| ||||||| |||||||||||||| Sbjct: 749 tttttattcttattgaatcgtg-taaagttttctaatccaataaggatttcgcgggcgaa 691 Query: 157 tatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnn 216 ||||||||||||||||||||||||||||||||| || |||||||||||| ||| Sbjct: 690 tatttactctttcctgtcttatttgttaatttagaaccttaccaaataaagcaatttttt 631 Query: 217 nggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatg 276 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 630 tggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatg 571 Query: 277 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 336 | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||||| ||| Sbjct: 570 cagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgca 511 Query: 337 acggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcgg 396 | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | Sbjct: 510 atggagcttccaaaaaatttctttccgagtcaattttctcagttttattaacccgggctg 451 Query: 397 ctctttattattgcttaaaatttgtagttcttctttcaagttacaatttttcattctcta 456 |||||| ||||||||| |||||| || || || ||||||||||| |||| ||||||| Sbjct: 450 ctcttttttattgctttaaatttttatttattgtttcaagttacgatttcgaattctctc 391 Query: 457 ttagtttta--------ttatattgatgctttttcacattgcc----ttttatgatgtaa 504 || ||||| ||||||||||||||| |||||||||| ||||||||||||| Sbjct: 390 ttttttttattattttattatattgatgctttatcacattgccttttttttatgatgtaa 331 Query: 505 ttcatagaccatacacagnggaattctatatcttatttatttcctcttccttctttctat 564 ||||||| ||||||||| ||||| ||||||||| ||| ||| |||||||||| ||||| Sbjct: 330 ttcataggccatacacattggaatcctatatctttctta-ttcttcttccttctatctat 272 Query: 565 catccctccctttatccacatccctttagttttgcttcacaacctanaatcc 616 ||||||||| |||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 271 catccctccttttatcgacatccctttagttttgcttcacaacctagaatcc 220 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatcca 24 ||||||||||||||||||||||| Sbjct: 824 aaagaagatctagaatatatcca 802
>gb|AF133488.1|AF133488 Pharus lappulaceus ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1182 Score = 543 bits (274), Expect = e-151 Identities = 461/521 (88%), Gaps = 4/521 (0%) Strand = Plus / Minus Query: 97 tttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaa 156 ||||||||||||||||||| | ||||||||||||||| |||||| |||||||||||||| Sbjct: 732 tttttactcttattgaatcacagtaaagtattctaatccaataaagatttcgcgggcgaa 673 Query: 157 tatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnn 216 ||||||||||||||||||||||| | ||||||||| |||||||||||| ||| Sbjct: 672 tatttactctttcctgtcttattcatcaatttataaccttaccaaataaagcaatttttt 613 Query: 217 nggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctat 275 |||||||||||||||||||||||||||||| ||||||||| |||| || |||||| ||| Sbjct: 612 tggtttgttccgccatcccacccaatgaagtattaggattcgtttttaagaaaatcttat 553 Query: 276 ggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgc 335 | | ||||||||||||||||||||||||||||||| | |||||||||||||||| ||||| Sbjct: 552 gcagtcataggttctgtcgttcccactgcttctccattaatggttaggtctgaaccccgc 493 Query: 336 aacggagcttccaa-aaaatttctttccgagttaattttctcagttttattaacccgggc 394 || ||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 492 aatggagcttccaacaaaatttctttccgagtcaattttctcagttttattaacccaggc 433 Query: 395 ggctctttattattgcttaaaatttgtagttcttctttcaagttacaatttttcattctc 454 ||||||||||||| ||| || | || ||||| ||||||||||| |||| |||||| Sbjct: 432 tgctctttattatttcttttaa-tcctatttcttgtttcaagttacgatttcgaattctc 374 Query: 455 tattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagacc 514 ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 373 agttatttttattatattgatgctttatcacattgccttttatgatgtaattcatagacc 314 Query: 515 atacacagnggaattctatatcttatttatttcctcttccttctttctatcatccctccc 574 ||||| | ||||| ||||||||| ||| ||||| ||| ||||||||||||||||||| Sbjct: 313 atacatattggaatcctatatctttctta-ttcctattctttctttctatcatccctcca 255 Query: 575 tttatccacatccctttagttttgcttcacaacctanaatc 615 |||||||||||||||||||||||||||||||||||| |||| Sbjct: 254 tttatccacatccctttagttttgcttcacaacctataatc 214
>gb|AY847088.1| Loudetia simplex ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1028 Score = 537 bits (271), Expect = e-149 Identities = 462/526 (87%), Gaps = 7/526 (1%) Strand = Plus / Minus Query: 91 tccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcg 150 |||||||||||| ||||||||||||| | |||||||||||||| |||||| |||||||| Sbjct: 705 tccttatttttattcttattgaatcgtgataaagtattctaatccaataaagatttcgcg 646 Query: 151 ggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaa 210 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct: 645 ggcgaatatttactctttcctgtcttatttgttaatttataaccttaccaaataaagcaa 586 Query: 211 nnnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaat 270 |||||||||||||||||||||||||||||| ||||||||||||| || ||||| Sbjct: 585 gttttttggtttgttccgccatcccacccaatgaagtattaggattctttttaaaaaaat 526 Query: 271 cctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaat 330 |||||| | ||||||||| |||||||||||| ||||||| || ||||||||||| ||||| Sbjct: 525 cctatgcagtcataggttttgtcgttcccacagcttctcttttaatggttaggtttgaat 466 Query: 331 cccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaaccc 390 || |||| |||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 465 cctgcaatggagcttccaaaaaatttctttccgagtcaattttctcagttttatcaaccg 406 Query: 391 gggcggctctttattattgcttaaaatttgtagttcttctttcaagttacaatttttcat 450 |||| ||||||| ||||||||| || || || || ||||||||| | | || || | Sbjct: 405 gggctgctcttttttattgctttaattt-----tttttgtttcaagtttcgaattctctt 351 Query: 451 tctctattagttttattatattgatgctttttcacattgccttttatgatgtaattcata 510 | | ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 350 tttttatta-ttttattatattgatgctttatcacattgccttttatgatgtaattcata 292 Query: 511 gaccatacacagnggaattctatatcttatttatttcctcttccttctttctatcatccc 570 ||||||||||| ||||| ||||||||| ||| ||| |||||||||| ||||||||||| Sbjct: 291 gaccatacacattggaatcctatatctttctta-ttcgtcttccttctatctatcatccc 233 Query: 571 tccctttatccacatccctttagttttgcttcacaacctanaatcc 616 ||| ||||||||||||| ||||||||||||| |||| ||| ||||| Sbjct: 232 tccttttatccacatccttttagttttgctttacaagctagaatcc 187
>dbj|AK104024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-E05, full insert sequence Length = 485 Score = 533 bits (269), Expect = e-148 Identities = 432/486 (88%), Gaps = 6/486 (1%) Strand = Plus / Minus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 484 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 425 Query: 158 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 217 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 424 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 365 Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 364 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 305 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 304 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 245 Query: 338 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 397 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 244 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 186 Query: 398 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 453 ||||| ||||| ||| ||||||||| | ||| || |||| |||| |||| ||||| Sbjct: 185 tctttgttattccttgaaatttgtattccttgtttcaatcaaattacgatttcgaattct 126 Query: 454 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 513 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 125 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 66 Query: 514 catacacagnggaattctatatcttatttatttcctcttccttctttctatcatccctcc 573 |||||| | ||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 65 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 7 Query: 574 ctttat 579 ||||| Sbjct: 6 ttttat 1
>gb|AY847074.1| Merxmuellera macowanii ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1077 Score = 529 bits (267), Expect = e-147 Identities = 455/520 (87%), Gaps = 9/520 (1%) Strand = Plus / Minus Query: 91 tccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcg 150 ||||||||||||||||||||||||| |||||||||||||||| |||||| |||||||| Sbjct: 746 tccttatttttactcttattgaatcatggtaaagtattctaatccaataaagatttcgcg 687 Query: 151 ggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaa 210 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct: 686 ggcgaatatttactctttcctgtcttatttgttaatttataaccttaccaaataaagcaa 627 Query: 211 nnnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaat 270 |||||||||||||||||||||||||||||| |||||||||||||||| ||||| Sbjct: 626 ttttgggggtttgttccgccatcccacccaatgaagtattaggattcttttcaagaaaat 567 Query: 271 cctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaat 330 |||||| | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||| Sbjct: 566 cctatgcagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaat 507 Query: 331 cccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaaccc 390 || |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 506 cctgcaatggagcttccaaaaaatttctttccgagtcaattttctcagttttattaaccc 447 Query: 391 gggcggctctttattattgcttaaaatttgtagttcttctttcaagttacaatttttcat 450 |||| ||||||||||||| ||| |||||| || || || |||||||||| |||| || Sbjct: 446 gggctgctctttattatttctttaaatttttatttattgtttcaagttatgatttcaaat 387 Query: 451 tctctattagttttatt--------atattgatgctttttcacattgccttttatgatgt 502 ||||| || ||||||| ||||||||||||| ||||||||||||||||||||| Sbjct: 386 tctctcttttttttattattttattatattgatgctttatcacattgccttttatgatgt 327 Query: 503 aattcatagaccatacacagnggaattctatatcttatttatttcctcttccttctttct 562 ||||||||||||||||||| ||||| |||||| | ||| || |||||||| ||| Sbjct: 326 aattcatagaccatacacattggaatcctatattattatta-ttatgattccttctatct 268 Query: 563 atcatccctccctttatccacatccctttagttttgcttc 602 ||||||||||| |||||||||||||| ||||||||||||| Sbjct: 267 atcatccctccttttatccacatcccgttagttttgcttc 228
>gb|AY847100.1| Chasmanthium sessiliflorum ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1142 Score = 525 bits (265), Expect = e-146 Identities = 436/495 (88%), Gaps = 7/495 (1%) Strand = Plus / Minus Query: 128 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 187 |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 689 tctaatccaataaagatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 630 Query: 188 tataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagt 247 ||||| |||||||||||| || |||||||| ||||||||||||||||||||| Sbjct: 629 tataaccttaccaaataaagcattttttttggtttgtttcgccatcccacccaatgaagt 570 Query: 248 gttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 307 |||||||||||||||||||||||||||| | ||||||||| | |||||||||| ||||| Sbjct: 569 attaggattcttttcaataaaatcctatgcagtcataggttttctcgttcccacagcttc 510 Query: 308 tccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagtt 367 ||||| ||||||||||| ||||||| |||| |||||||||||||||||||||||||||| Sbjct: 509 tcctttaatggttaggtttgaatcctgcaatggagcttccaaaaaatttctttccgagtc 450 Query: 368 aattttctcagttttattaacccgggcggctctttattattgcttaaaatttgtagttct 427 ||||||||||||||||||||||| ||| ||||||| ||||||||| |||||| || || | Sbjct: 449 aattttctcagttttattaaccctggctgctcttttttattgctttaaatttttatttat 390 Query: 428 tctttcaagttacaatttttcattctctattagt------tttattatattgatgctttt 481 | ||||||||||| |||| ||||||| || | ||||||||||||||||||| Sbjct: 389 tgtttcaagttacgatttcgaattctctcttttttttttatttattatattgatgcttta 330 Query: 482 tcacattgccttttatgatgtaattcatagaccatacacagnggaattctatatcttatt 541 |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| | Sbjct: 329 tcacattgccttttatgatgtaattcatagaccatacacattggaatcctatatctttct 270 Query: 542 tatttcctcttccttctttctatcatccctccctttatccacatccctttagttttgctt 601 || ||| |||||||||| |||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 269 ta-ttcttcttccttctatctatcatccctccttttatccccatccctttagttttgctt 211 Query: 602 cacaacctanaatcc 616 ||||||||| ||||| Sbjct: 210 cacaacctagaatcc 196 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatcca 24 ||||||||||||||||||||||| Sbjct: 786 aaagaagatctagaatatatcca 764
>gb|AY912206.1| Hickelia madagascariensis ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1108 Score = 523 bits (264), Expect = e-145 Identities = 402/448 (89%), Gaps = 13/448 (2%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||||| ||||||||||||| Sbjct: 843 aaagaagatctagaatatatctag-atgtgtgtgtctatttatctatattctatatttat 785 Query: 62 agataataatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgc 117 ||||||| ||| || |||| ||||||| ||||||||||||||||||||||||||| Sbjct: 784 agataat---gtaatctttcttaacaaaaaatctccttatttttactcttattgaatcgc 728 Query: 118 ggtaaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtctta 177 ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 727 ggtaaagtattctaattcaataaagatttcgcgggcgaaaatttactctttcctgtctta 668 Query: 178 tttgttaatttata-----aacttaccaaataagacaannnnnnnggtttgttccgccat 232 |||||||||||||| | ||||||||||||| ||| ||||||||||||||| Sbjct: 667 tttgttaatttatattataaccttaccaaataaggcaatttttttggtttgttccgccat 608 Query: 233 cccacccaatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgt 292 ||||||||||||||| |||||||||||||||| ||||||||||| | ||||||||| ||| Sbjct: 607 cccacccaatgaagtattaggattcttttcaagaaaatcctatgcagtcataggttttgt 548 Query: 293 cgttcccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaa 352 |||||||||| ||||||||| |||||||||||||||||||| ||| |||||||||||||| Sbjct: 547 cgttcccactacttctcctttaatggttaggtctgaatcccacaatggagcttccaaaaa 488 Query: 353 atttctttccgagttaattttctcagttttattaacccgggcggctctttattattgctt 412 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || Sbjct: 487 atttctttccgagtcaattttctcagttttattaacccgggcggctctttattattgttt 428 Query: 413 aaaatttgtagttcttctttcaagttac 440 ||||||||| ||||| ||||||||||| Sbjct: 427 taaatttgtatttcttgtttcaagttac 400 Score = 109 bits (55), Expect = 1e-20 Identities = 119/139 (85%), Gaps = 3/139 (2%) Strand = Plus / Minus Query: 478 tttttcacattgccttttatgatgtaattcatagaccatacacagnggaattctatatc- 536 ||||||||||||| ||||||||||||| |||||||||||||| | ||||| | ||||| Sbjct: 347 tttttcacattgctttttatgatgtaactcatagaccatacatattggaatcccatatca 288 Query: 537 ttatttatttcctcttccttctttctatcatccctccctttatccacatccctttagttt 596 ||| ||| ||| || ||||||||||||||||||| ||||||||||| || ||||||| Sbjct: 287 ttacgnattccct--tctttctttctatcatccctccttttatccacatgcccttagttt 230 Query: 597 tgcttcacaacctanaatc 615 |||||||||| ||| |||| Sbjct: 229 tgcttcacaagctagaatc 211
>gb|AY847084.1| Pennisetum setaceum ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1016 Score = 521 bits (263), Expect = e-145 Identities = 466/536 (86%), Gaps = 13/536 (2%) Strand = Plus / Minus Query: 91 tccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcg 150 |||||||||||| ||||||||||||| |||||||||||||||| ||||||| |||||||| Sbjct: 747 tccttatttttattcttattgaatcgtggtaaagtattctaatccaataaggatttcgcg 688 Query: 151 ggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaa 210 ||||||||||||||||||||||||||||||||||||||| || |||| ||||||| ||| Sbjct: 687 ggcgaatatttactctttcctgtcttatttgttaatttagaatcttatcaaataaagcaa 628 Query: 211 nnnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 627 tttttttggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaat 568 Query: 271 cctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaat 330 || ||| ||||||||| |||||||||||| |||||||||| ||||||||||| ||||| Sbjct: 567 ccgatgtcgtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaat 508 Query: 331 cccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaaccc 390 || |||| |||||||||||||||||||||||||||| |||||||||||||||||| || | Sbjct: 507 cctgcaatggagcttccaaaaaatttctttccgagtcaattttctcagttttattgacgc 448 Query: 391 gggcggctctttattattgcttaaaatttgtagttcttctttcaagttacaatttttcat 450 |||| ||||||| ||||| ||| |||||| | || || ||||||||||| |||| || Sbjct: 447 gggctgctcttttttatttctttaaattttgattttttatttcaagttacgatttcgaat 388 Query: 451 tctctattagtttta--------ttatattgatgctttttcacattgc----cttttatg 498 ||||| || ||||| ||||||||||||||| | ||||||| ||||||| Sbjct: 387 tctctcttttttttattattttattatattgatgctttataacattgctttttttttatg 328 Query: 499 atgtaattcatagaccatacacagnggaattctatatcttatttatttcctcttccttct 558 ||||||||||||||||||||||| ||||||||||||||| ||| ||| |||||||||| Sbjct: 327 atgtaattcatagaccatacacattggaattctatatctttctta-ttcttcttccttct 269 Query: 559 ttctatcatccctccctttatccacatccctttagttttgcttcacaacctanaat 614 |||||||||||||| ||||||||||||||||||||||||||||||| |||| ||| Sbjct: 268 atctatcatccctccttttatccacatccctttagttttgcttcacagcctaaaat 213
>gb|AY847073.1| Danthonia spicata ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1114 Score = 517 bits (261), Expect = e-143 Identities = 331/354 (93%), Gaps = 2/354 (0%) Strand = Plus / Minus Query: 144 tttcgcgggcgaatatttactcttt-cctgtcttatttgttaatttataaacttaccaaa 202 ||||||||||||||||| ||||||| |||||||| ||||||||||||||| ||||||||| Sbjct: 635 tttcgcgggcgaatatt-actcttttcctgtcttttttgttaatttataaccttaccaaa 577 Query: 203 taagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttc 262 |||||||| |||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 576 taagacaatttttttggtttgttccgccatcccacccaatgaagtattaggattcttttc 517 Query: 263 aataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatggttag 322 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 516 aataaaatcctatggagtcataggttctgtcgttcccactgcttctccttgaatggttag 457 Query: 323 gtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctcagtttt 382 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 456 gtctgaatcccgcaatggagcttccaaaaaatttctttccgagttaattttctcagtttt 397 Query: 383 attaacccgggcggctctttattattgcttaaaatttgtagttcttctttcaagttacaa 442 |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| | Sbjct: 396 attaacccgggcggctctttattattgctttaaatttgtagttcttgtttcaagttacga 337 Query: 443 tttttcattctctattagttttattatattgatgctttttcacattgcctttta 496 ||| ||||||| ||| |||||||||||||||||||| ||||||||||||||| Sbjct: 336 tttcgaattctctgttatttttattatattgatgctttatcacattgcctttta 283 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Minus Query: 545 ttcctcttccttctttctatcatccctccctttatccacatccctttagttttgcttcac 604 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 252 ttcctcttccttctttctatcatccctccctttatccacatccctttagttttgcttcac 193 Query: 605 aacctanaatccca 618 |||||| ||||||| Sbjct: 192 aacctagaatccca 179 Score = 87.7 bits (44), Expect = 4e-14 Identities = 47/48 (97%) Strand = Plus / Minus Query: 83 aaaaaatatccttatttttactcttattgaatcgcggtaaagtattct 130 ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 682 aaaaaatctccttatttttactcttattgaatcgcggtaaagtattct 635
>gb|AY912215.1| Temochloa liliana ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1149 Score = 517 bits (261), Expect = e-143 Identities = 460/528 (87%), Gaps = 11/528 (2%) Strand = Plus / Minus Query: 97 tttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaa 156 |||||||||||||| ||||| |||||||||||| ||| |||||| |||||||||||||| Sbjct: 739 tttttactcttattaaatcgtggtaaagtattcaaatccaataaagatttcgcgggcgaa 680 Query: 157 tatttactctttcctgtcttatttg--------ttaatttataaacttaccaaataagac 208 |||||||||||| |||||||||||| ||||||||||| |||||||||||| | Sbjct: 679 tatttactctttactgtcttatttgcttatttgttaatttataaccttaccaaataaagc 620 Query: 209 aannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaa 268 || |||||||||||||||||||||||||||||| |||||||||||||||| ||| Sbjct: 619 aatttttttggtttgttccgccatcccacccaatgaagtattaggattcttttcaaaaaa 560 Query: 269 atcctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctga 328 |||||||||| ||||||||| |||||||||||| ||||||| || |||| |||||| ||| Sbjct: 559 atcctatggagtcataggttttgtcgttcccacagcttctcttttaatgcttaggtttga 500 Query: 329 atcccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaac 388 |||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 499 atcctgcaatggagcttccaaaaaatttctttccgagtcaattttctcagttttattaac 440 Query: 389 ccgggcggctctttattattgcttaaaatttgtagttcttctttcaagttacaatttttc 448 ||| || |||| ||||||||| || |||||| || || || ||||||||||| ||||| Sbjct: 439 ccgagctgctccttattattgttttaaatttttatttattgtttcaagttacgattttga 380 Query: 449 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 508 ||||| | || |||| || |||||||||||| ||||||||||||||||||||| ||||| Sbjct: 379 attctttctt--tttttttttattgatgctttatcacattgccttttatgatgtcattca 322 Query: 509 tagaccatacacagnggaattctatatcttatttatttcctcttccttctttctatcatc 568 ||||||||||||| ||||| ||||||| | ||| || |||||||||| ||||||||| Sbjct: 321 tagaccatacacataggaatcctatatccttctta-ttattcttccttctatctatcatc 263 Query: 569 cctccctttatccacatccctttagttttgcttcacaacctanaatcc 616 |||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 262 cctccctttatccacatccctttagttttgcttcacaacctagaatcc 215
>gb|AY847099.1| Chasmanthium laxum rpl16 gene, intron; chloroplast Length = 1165 Score = 513 bits (259), Expect = e-142 Identities = 435/496 (87%), Gaps = 8/496 (1%) Strand = Plus / Minus Query: 128 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 187 |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 710 tctaatccaataaagatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 651 Query: 188 tataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagt 247 ||||| |||||||||||| || |||||||| ||||||||||||||||||||| Sbjct: 650 tataaccttaccaaataaagcattttttttggtttgtttcgccatcccacccaatgaagt 591 Query: 248 gttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 307 |||||||||||||||||||||||||||| | ||||||||| | |||||||||| ||||| Sbjct: 590 attaggattcttttcaataaaatcctatgcagtcataggttttctcgttcccacagcttc 531 Query: 308 tccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagtt 367 ||||| ||||||||||| ||||||| |||| |||||||||||||||||||||||||||| Sbjct: 530 tcctttaatggttaggtttgaatcctgcaatggagcttccaaaaaatttctttccgagtc 471 Query: 368 aattttctcagttttattaacccgggcggctctttattattgcttaaaatttgtagttct 427 ||||||||||||||||||||||| ||| ||||||| ||||||||| |||||| || || | Sbjct: 470 aattttctcagttttattaaccctggctgctcttttttattgctttaaatttttatttat 411 Query: 428 tctttcaagttacaatttttcattctctattagttt-------tattatattgatgcttt 480 | ||||||||||| |||| ||||||| || ||| ||||||||||||||||| Sbjct: 410 tgtttcaagttacgatttcgaattctctctttttttttttatttattatattgatgcttt 351 Query: 481 ttcacattgccttttatgatgtaattcatagaccatacacagnggaattctatatcttat 540 |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 350 atcacattgccttttatgatgtaattcatagaccatacacattggaatcctatatctttc 291 Query: 541 ttatttcctcttccttctttctatcatccctccctttatccacatccctttagttttgct 600 ||| ||| |||||||||| |||||||||||||| ||||||| |||||||||||||||| | Sbjct: 290 tta-ttcttcttccttctatctatcatccctccttttatccccatccctttagttttgtt 232 Query: 601 tcacaacctanaatcc 616 |||||||||| ||||| Sbjct: 231 tcacaacctagaatcc 216 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatcca 24 ||||||||||||||||||||||| Sbjct: 808 aaagaagatctagaatatatcca 786
>gb|AF133482.1|AF133482 Chasmanthium laxum ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1195 Score = 513 bits (259), Expect = e-142 Identities = 459/527 (87%), Gaps = 15/527 (2%) Strand = Plus / Minus Query: 97 tttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaa 156 |||||| ||||||||||||||||| |||||| |||||| |||||||||||||| Sbjct: 760 tttttattcttattgaatcgcggtg-----ttctaagccaataaagatttcgcgggcgaa 706 Query: 157 tatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnn 216 |||||||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct: 705 tatttactctttcctgtcttatttgttaatttataaccttaccaaataaaacaatttttt 646 Query: 217 nggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatg 276 |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 645 tggtttgtttcgccatcccacccaatgaagtattaggattcttttcaataaaatcctatg 586 Query: 277 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 336 | |||||| |||| ||||||||| |||||||||| ||||||||||| ||||||| ||| Sbjct: 585 cagtcatagattct--cgttcccacagcttctcctttaatggttaggtttgaatcctgca 528 Query: 337 acggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcgg 396 | |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| | Sbjct: 527 atggagcttccaaaaaatttctttccgagtcaattttctcagttttattaacccaggctg 468 Query: 397 ctctttattattgcttaaaatttgtagttcttctttcaagttacaatttttcattctcta 456 |||||| ||||||||| |||||| || || || ||||||||||| |||| ||||||| Sbjct: 467 ctcttttttattgctttaaatttttatttattgtttcaagttacgatttcgaattctctc 408 Query: 457 ttagttt-------tattatattgatgctttttcacattgccttttatgatgtaattcat 509 || ||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 407 ttttttttttattttattatattgatgctttatcacattgccttttatgatgtaattcat 348 Query: 510 agaccatacacagnggaattctatatcttatttatttcctcttccttctttctatcatcc 569 |||||||||||| ||||| ||||||||| ||| ||| |||||||||| |||||||||| Sbjct: 347 agaccatacacattggaatcctatatctttctta-ttcttcttccttctatctatcatcc 289 Query: 570 ctccctttatccacatccctttagttttgcttcacaacctanaatcc 616 |||| ||||||| |||||||||||||||| ||||||||||| ||||| Sbjct: 288 ctccttttatccccatccctttagttttgtttcacaacctagaatcc 242 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatcca 24 ||||||||||||||||||||||| Sbjct: 838 aaagaagatctagaatatatcca 816
>gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0006J12, complete sequence Length = 157069 Score = 502 bits (253), Expect = e-139 Identities = 460/525 (87%), Gaps = 9/525 (1%) Strand = Plus / Minus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 145293 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 145234 Query: 158 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 217 |||||||||||| ||||||||||||||||| |||| |||| |||||||||||| Sbjct: 145233 atttactctttcatgtcttatttgttaattcataaccttatcaaataagacaattttttt 145174 Query: 218 -ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatg 276 |||||||||||||||||||||||||||||| || ||||| ||||||| |||||||||| Sbjct: 145173 tggtttgttccgccatcccacccaatgaagtattgggatttttttcaagaaaatcctatc 145114 Query: 277 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 336 | |||||||||||||| |||||||||||||||||| ||||||||||| |||||| |||| Sbjct: 145113 cagtcataggttctgtcattcccactgcttctcctttaatggttaggtttgaatctcgca 145054 Query: 337 acggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcgg 396 | |||||||||||||||||||||||||||| || |||||||| ||||||||| | || | Sbjct: 145053 atggagcttccaaaaaatttctttccgagtcaa-tttctcag-tttattaactcaggacg 144996 Query: 397 ctctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattc 452 |||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| |||| Sbjct: 144995 ctctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattc 144936 Query: 453 tctattagttttattatattgatgctttttcacattgccttttatgatgtaattcataga 512 | | ||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 144935 tttgttatttttattatattgatgctttatcacattgctttttatgatgtaattcataga 144876 Query: 513 ccatacacagnggaattctatatcttatttatttcctcttccttctttctatcatccctc 572 ||||||| | ||||| ||||||||| | | ||| |||||||||||||||||||||| || Sbjct: 144875 ccatacatattggaatcctatatctt-tcttttttctcttccttctttctatcatccttc 144817 Query: 573 cctttatccacat-ccctttagttttgcttcacaacctanaatcc 616 | |||||| |||| |||||||||||||||||||||| || ||||| Sbjct: 144816 cttttatctacatcccctttagttttgcttcacaacttagaatcc 144772 Score = 56.0 bits (28), Expect = 1e-04 Identities = 53/60 (88%), Gaps = 1/60 (1%) Strand = Plus / Minus Query: 1 aaaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 |||||| ||||||||||||||| || |||||| || |||||||||| |||||||||||| Sbjct: 145384 aaaagaggatctagaatatatctag-atgtgtatgtttatttatctatattctatattta 145326
>gb|AC104708.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1174_H11, complete sequence Length = 102567 Score = 502 bits (253), Expect = e-139 Identities = 460/525 (87%), Gaps = 9/525 (1%) Strand = Plus / Minus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 4480 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 4421 Query: 158 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 217 |||||||||||| ||||||||||||||||| |||| |||| |||||||||||| Sbjct: 4420 atttactctttcatgtcttatttgttaattcataaccttatcaaataagacaattttttt 4361 Query: 218 -ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatg 276 |||||||||||||||||||||||||||||| || ||||| ||||||| |||||||||| Sbjct: 4360 tggtttgttccgccatcccacccaatgaagtattgggatttttttcaagaaaatcctatc 4301 Query: 277 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 336 | |||||||||||||| |||||||||||||||||| ||||||||||| |||||| |||| Sbjct: 4300 cagtcataggttctgtcattcccactgcttctcctttaatggttaggtttgaatctcgca 4241 Query: 337 acggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcgg 396 | |||||||||||||||||||||||||||| || |||||||| ||||||||| | || | Sbjct: 4240 atggagcttccaaaaaatttctttccgagtcaa-tttctcag-tttattaactcaggacg 4183 Query: 397 ctctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattc 452 |||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| |||| Sbjct: 4182 ctctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattc 4123 Query: 453 tctattagttttattatattgatgctttttcacattgccttttatgatgtaattcataga 512 | | ||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 4122 tttgttatttttattatattgatgctttatcacattgctttttatgatgtaattcataga 4063 Query: 513 ccatacacagnggaattctatatcttatttatttcctcttccttctttctatcatccctc 572 ||||||| | ||||| ||||||||| | | ||| |||||||||||||||||||||| || Sbjct: 4062 ccatacatattggaatcctatatctt-tcttttttctcttccttctttctatcatccttc 4004 Query: 573 cctttatccacat-ccctttagttttgcttcacaacctanaatcc 616 | |||||| |||| |||||||||||||||||||||| || ||||| Sbjct: 4003 cttttatctacatcccctttagttttgcttcacaacttagaatcc 3959 Score = 56.0 bits (28), Expect = 1e-04 Identities = 53/60 (88%), Gaps = 1/60 (1%) Strand = Plus / Minus Query: 1 aaaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 |||||| ||||||||||||||| || |||||| || |||||||||| |||||||||||| Sbjct: 4571 aaaagaggatctagaatatatctag-atgtgtatgtttatttatctatattctatattta 4513
>gb|AY847089.1| Tristachya biseriata ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1150 Score = 500 bits (252), Expect = e-138 Identities = 457/526 (86%), Gaps = 7/526 (1%) Strand = Plus / Minus Query: 91 tccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcg 150 |||||||||||| | ||||||||||| | |||||||||||||| |||||| ||||||| Sbjct: 736 tccttatttttatttttattgaatcgtgataaagtattctaatccaataaagatttcgca 677 Query: 151 ggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaa 210 |||||||||||||||||| | ||||||||||||||||||||| |||||||||||| ||| Sbjct: 676 ggcgaatatttactcttttcngtcttatttgttaatttataaccttaccaaataaagcaa 617 Query: 211 nnnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaat 270 |||||||||||||||||| ||||||||||| ||||||||||||| |||||||| Sbjct: 616 tttttttggtttgttccgccatcccgcccaatgaagtattaggattctttttaataaaat 557 Query: 271 cctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaat 330 |||||| | ||||||||| |||||||||||| ||||||| || ||||||||||| ||||| Sbjct: 556 cctatgcagtcataggttttgtcgttcccacagcttctcttttaatggttaggtttgaat 497 Query: 331 cccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaaccc 390 || |||| |||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 496 cctgcaatggagcttccaaaaaatttctttccgagtcaattttctcagttttatcaaccg 437 Query: 391 gggcggctctttattattgcttaaaatttgtagttcttctttcaagttacaatttttcat 450 |||| ||||||| ||||||||| || || || || ||||||||| | | || || | Sbjct: 436 gggctgctcttttttattgctttaattt-----tttttgtttcaagtttcgaattctctt 382 Query: 451 tctctattagttttattatattgatgctttttcacattgccttttatgatgtaattcata 510 | | ||||| |||| |||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 381 tttttatta-tttttttattttgatgctttatcacattgccttttatgatgtaattcata 323 Query: 511 gaccatacacagnggaattctatatcttatttatttcctcttccttctttctatcatccc 570 ||||||||||| ||||| ||||||||| ||| ||| |||||||||| ||||||||||| Sbjct: 322 gaccatacacattggaatcctatatctttctta-ttcttcttccttctatctatcatccc 264 Query: 571 tccctttatccacatccctttagttttgcttcacaacctanaatcc 616 ||| ||||||||||||||||||||||||||| |||| ||| ||||| Sbjct: 263 tccttttatccacatccctttagttttgctttacaagctagaatcc 218 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatcca 24 ||||||||||||||||||||||| Sbjct: 800 aaagaagatctagaatatatcca 778
>gb|AY847090.1| Isachne arundinacea ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1101 Score = 498 bits (251), Expect = e-137 Identities = 462/532 (86%), Gaps = 10/532 (1%) Strand = Plus / Minus Query: 92 ccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgg 151 ||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||| Sbjct: 714 ccttatttttactcttattgaatcgtggtaaagtattctaatccaataaagatttcgcgg 655 Query: 152 gcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaan 211 |||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct: 654 gcgaatttttactctttcctgtcttatttgttaatttataa-cttaccaaataaagcaat 596 Query: 212 nnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatc 271 ||||||||||||||||||| | |||||||| ||||||||||||||||||||||| Sbjct: 595 ttttttggtttgttccgccatcccatctaatgaagtattaggattcttttcaataaaatc 536 Query: 272 ctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatc 331 ||||| ||||||||| |||||||||||| |||||||||| |||| |||||| |||||| Sbjct: 535 ctatgctgtcataggttttgtcgttcccacagcttctcctttaatgtttaggtttgaatc 476 Query: 332 ccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccg 391 | |||| |||||||||||||||||||||||||||| ||||||||||||||||||||| || Sbjct: 475 ctgcaatggagcttccaaaaaatttctttccgagtcaattttctcagttttattaacacg 416 Query: 392 ggcggctctttattattgcttaaaatttgtagttcttctttcaagttacaatttttcatt 451 ||| ||| |||||||||||| ||||| | || || ||||| ||||| |||| ||| Sbjct: 415 ggctactccttattattgcttttaattt-ttttttttgtttcaggttactatttcgaatt 357 Query: 452 ctctattagttttattatattga-------tgctttttcacattgccttttatgatgtaa 504 |||| ||| ||||||||| || | |||||| ||||||||||||||||| ||||| Sbjct: 356 ctctcttatttttattattttaatatattgtgctttatcacattgccttttatggtgtaa 297 Query: 505 ttcatagaccatacacagnggaattctatatcttatttatttcctcttccttctttctat 564 | ||||||||||||||| ||||| ||||||||| ||| ||| ||||| |||| ||||| Sbjct: 296 tccatagaccatacacataggaatcctatatctttctta-ttcttcttctttctatctat 238 Query: 565 catccctccctttatccacatccctttagttttgcttcacaacctanaatcc 616 ||||||||| |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 237 catccctccttttatccacatccctttagttttgcttcacaacctagaatcc 186
>gb|AY847096.1| Bromuniola gossweileri rpl16 gene, intron; chloroplast Length = 557 Score = 484 bits (244), Expect = e-133 Identities = 431/496 (86%), Gaps = 8/496 (1%) Strand = Plus / Minus Query: 128 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 187 |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 521 tctaatccaataaagatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 462 Query: 188 tataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagt 247 ||||| |||||||||||| || |||||||| ||||||||||||||||||||| Sbjct: 461 tataaccttaccaaataaagcattttttttggtttgtttcgccatcccacccaatgaagt 402 Query: 248 gttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 307 |||||||||||||||||||||||||||| | ||||||||| | |||||||||| ||||| Sbjct: 401 attaggattcttttcaataaaatcctatgcagtcataggttttctcgttcccacagcttc 342 Query: 308 tccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagtt 367 ||||| ||||||||||| ||||||| |||| |||||||||||||||||||||||||||| Sbjct: 341 tcctttaatggttaggtttgaatcctgcaatggagcttccaaaaaatttctttccgagtc 282 Query: 368 aattttctcagttttattaacccgggcggctctttattattgcttaaaatttgtagttct 427 ||||||||||||||||||||||| ||| ||||||| ||||||||| |||||| || || | Sbjct: 281 aattttctcagttttattaaccctggctgctcttttttattgctttaaatttttatttat 222 Query: 428 tctttcaagttacaatttttcattctctattagttt-------tattatattgatgcttt 480 | ||||||||||| |||| ||||||| || ||| ||||||||||| ||||| Sbjct: 221 tgtttcaagttacgatttcgaattctctctttttttttttatttattatattgaggcttt 162 Query: 481 ttcacattgccttttatgatgtaattcatagaccatacacagnggaattctatatcttat 540 |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 161 atcacattgccttttatgatgtaattcatagaccatacacattggaatcctatatctttc 102 Query: 541 ttatttcctcttccttctttctatcatccctccctttatccacatccctttagttttgct 600 ||| ||| |||||||||| ||||| |||||||| ||||||| ||||| |||||||||| | Sbjct: 101 tta-ttcttcttccttctatctatnatccctccttttatccccatccttttagttttgtt 43 Query: 601 tcacaacctanaatcc 616 ||||||||| ||||| Sbjct: 42 ccacaacctaaaatcc 27
>gb|U54741.1|SMU54741 Sucrea maculata ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1030 Score = 484 bits (244), Expect = e-133 Identities = 426/487 (87%), Gaps = 8/487 (1%) Strand = Plus / Minus Query: 83 aaaaaatatccttatttttactcttattgaatcgcggtaaagtattctaattcaataaga 142 ||||||| ||||||||| |||||||||||||| | ||||||||||||||||||||||| Sbjct: 734 aaaaaatctccttatttg-actcttattgaatcacagtaaagtattctaattcaataagg 676 Query: 143 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaa 202 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 675 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttataaccttaccaaa 616 Query: 203 taagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttc 262 |||||||| ||||||||||||||||| |||||||||||| |||| || | Sbjct: 615 taagacaatttttttggtttgttccgccatcctacccaatgaagtattagaat------c 562 Query: 263 aataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatggttag 322 || | ||| ||||| | ||||||||||| ||||||||||| ||||||||| ||||||||| Sbjct: 561 aaaagaattctatgcagtcataggttctatcgttcccactacttctcctttaatggttag 502 Query: 323 gtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctcagtttt 382 ||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 501 gtctgaatcccacaatggagcttccaaaaaatttctttccgagtcaattttctcagtttt 442 Query: 383 attaacccgggcggctctttattattgcttaaaatttgtagttcttctttcaagttacaa 442 |||||| || | |||| |||||||||||| ||||||||| ||||| ||||||||||| | Sbjct: 441 attaactcgagttgctccttattattgctttaaatttgtatttcttgtttcaagttacga 382 Query: 443 tttttcattctctattagttttattatattgatgctttttcacattgccttttatgatgt 502 ||| ||||||||||| ||| |||||||||||||||| | ||||||||||||||||||| Sbjct: 381 tttcgaattctctattattttgattatattgatgctttattacattgccttttatgatgt 322 Query: 503 aattcatagaccatacacagnggaattctatatcttatttatttcctcttccttctttct 562 || ||||||||||||| || || | ||||||||| ||| ||||||||||| |||||| Sbjct: 321 aacccatagaccatacataggagagtcctatatctttctta-ttcctcttcctgctttct 263 Query: 563 atcatcc 569 ||||||| Sbjct: 262 atcatcc 256 Score = 52.0 bits (26), Expect = 0.002 Identities = 42/46 (91%), Gaps = 1/46 (2%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatcta 47 ||||||||||||||||||||| || ||||||||| |||||||||| Sbjct: 808 aaagaagatctagaatatatctag-atgtgtgtgtctatttatcta 764 Score = 50.1 bits (25), Expect = 0.009 Identities = 30/32 (93%) Strand = Plus / Minus Query: 583 catccctttagttttgcttcacaacctanaat 614 ||||| |||||||||||||||||||||| ||| Sbjct: 260 catccttttagttttgcttcacaacctagaat 229
>gb|AY847085.1| Arundinella hirta ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1186 Score = 482 bits (243), Expect = e-133 Identities = 459/531 (86%), Gaps = 21/531 (3%) Strand = Plus / Minus Query: 97 tttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaa 156 |||||| ||||||||||||| |||||||||||||||| || |||||||||||||| Sbjct: 740 tttttattcttattgaatcgtggtaaagtattctaat------aggatttcgcgggcgaa 687 Query: 157 tatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnn 216 ||||||||||||||||||||||||||||||||| || ||| ||||||| ||| Sbjct: 686 tatttactctttcctgtcttatttgttaatttagaactttatcaaataaagcaatttttt 627 Query: 217 nggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatg 276 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 626 tggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatg 567 Query: 277 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 336 | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||||| ||| Sbjct: 566 tagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgca 507 Query: 337 acggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcgg 396 | |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| | Sbjct: 506 atggagcttccaaaaaatttctttccgagtcaattttctcagttttattaaccc-ggctg 448 Query: 397 ctctttattattgcttaaaatttgtagttcttctttcaagttacaatttttcattctcta 456 |||||| ||||||||| | |||| || || || ||||||||||| |||| ||||||| Sbjct: 447 ctcttttttattgctttatatttttatttgttgtttcaagttacgatttcgaattctctc 388 Query: 457 ttagtttta--------ttatattgatgctttttcacattgcc----ttttatgatgtaa 504 || ||||| ||||||||||||||| |||||||||| ||||||||||||| Sbjct: 387 ttttttttattattttattatattgatgctttatcacattgccttttttttatgatgtaa 328 Query: 505 ttcatagaccatacacagnggaattctatatcttatttatttcctcttccttctttctat 564 ||||||| ||||||||| ||||| ||||||||| ||| ||| |||||||||| ||||| Sbjct: 327 ttcatag-ccatacacattggaatcctatatctttctta-ttcttcttccttctatctat 270 Query: 565 catccctccctttatccacatccctttagttttgcttcacaacctanaatc 615 ||||||||| ||||||||||||||||||||||||||||||| |||| |||| Sbjct: 269 catccctccttttatccacatccctttagttttgcttcacagcctagaatc 219 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatat 21 |||||||||||||||||||| Sbjct: 816 aaagaagatctagaatatat 797
>gb|AY847107.1| Zeugites hackelii ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1073 Score = 474 bits (239), Expect = e-130 Identities = 417/479 (87%), Gaps = 9/479 (1%) Strand = Plus / Minus Query: 145 ttcgcgggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaata 204 ||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||| Sbjct: 698 ttcgcgggcgaatgtttactctttcctgtcttatttggtaatttataaccttaccaaata 639 Query: 205 agacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaa 264 | | | |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 638 aagccatttttttggtttgttccgccatcccacccaatgaagtattaggattcttttcaa 579 Query: 265 taaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggt 324 ||||||||||| | ||||||||| | |||||||||| |||||||||| ||||||||||| Sbjct: 578 taaaatcctatccagtcataggttttttcgttcccacagcttctcctttaatggttaggt 519 Query: 325 ctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttat 384 ||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 518 ttgaatcctgcaatggagcttccaaaaaatttctttccgagtcaattttctcagttttat 459 Query: 385 taacccgggcggctctttattattgcttaaaatttgtagttcttctttcaagttacaatt 444 |||||||||| ||||||| ||||||||| |||||| || || || ||||||||||| ||| Sbjct: 458 taacccgggctgctcttttttattgcttgaaatttttatttattgtttcaagttacgatt 399 Query: 445 tttcattctctattagttttattat--------attgatgctttttcacattgcctttta 496 | ||||||| || |||| |||| ||||||||||| ||||||||||||||| Sbjct: 398 tcgaattctctcttttttttcttattttattatattgatgctttatcacattgcctttta 339 Query: 497 tgatgtaattcatagaccatacacagnggaattctatatcttatttatttcctcttcctt 556 ||||||||||||||||||||||||| ||||| ||||||||| ||| ||| | |||||| Sbjct: 338 tgatgtaattcatagaccatacacattggaatcctatatctttctta-ttctttttcctt 280 Query: 557 ctttctatcatccctccctttatccacatccctttagttttgcttcacaacctanaatc 615 || ||||||||||||| |||||||||||||||||||||||| ||||||||||| |||| Sbjct: 279 ctacctatcatccctccttttatccacatccctttagttttgtttcacaacctagaatc 221
>gb|AY847080.1| Sporobolus indicus ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1023 Score = 472 bits (238), Expect = e-130 Identities = 464/542 (85%), Gaps = 19/542 (3%) Strand = Plus / Minus Query: 87 aatatccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaattt 146 ||||||||| |||||| ||||||||||| ||||||||||||||| |||||| |||| Sbjct: 744 aatatccttttttttaaccttattgaatcatagtaaagtattctaatccaataaagattt 685 Query: 147 cgcgggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataag 206 ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| Sbjct: 684 cgcgggcgaatatttactctttcttgtcttatttgttaatttataaccttaccaaataaa 625 Query: 207 acaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaata 266 ||| |||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 624 gcaatttttttggtttgttccgccatcccacccaatgaagtattaggattcttttcaata 565 Query: 267 aaatc----ctatggaatcataggttctgtcgttcccactgcttctccttgaatggttag 322 ||||| ||||| | ||||||||| |||||||||||| |||||||||| ||||||||| Sbjct: 564 aaatcaatcctatgcagtcataggttttgtcgttcccacagcttctcctttaatggttag 505 Query: 323 gtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctcagtttt 382 || ||||||| |||| |||||||||||| |||| ||||||||||||||||||||| Sbjct: 504 gtttgaatcctgcaatggagcttccaaa------cttttcgagttaattttctcagtttt 451 Query: 383 attaacccgggcggctctttattattgcttaaaatttgtagttcttctttcaagttacaa 442 ||||| |||||| ||||||||||||||||| |||||| || || || |||||| |||| | Sbjct: 450 attaatccgggctgctctttattattgctttaaatttttatttattgtttcaaattacga 391 Query: 443 tttttcattctctattagt--------tttattatattgatgctttttcacattgccttt 494 ||| ||||||| ||| | ||||||||||||||||||| ||||||||||||| Sbjct: 390 tttaaaattctctcttatttttattattttattatattgatgctttatcacattgccttt 331 Query: 495 tatgatgtaattcatagaccatacacagnggaattctatatcttatttatttcctcttcc 554 |||||||||||||||||||||| || | ||||| |||||||| ||| ||| |||||| Sbjct: 330 tatgatgtaattcatagaccatccatattggaatcttatatctttctta-ttcttcttcc 272 Query: 555 ttctttctatcatccctccctttatccacatccctttagttttgcttcacaacctanaat 614 ||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||| ||| Sbjct: 271 ttctttctatcatccctccttttatccacatccgtttagttttctttcacaacctagaat 212 Query: 615 cc 616 || Sbjct: 211 cc 210
>gb|AY847076.1| Aristida purpurea var. curvifolia ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1112 Score = 468 bits (236), Expect = e-128 Identities = 443/511 (86%), Gaps = 4/511 (0%) Strand = Plus / Minus Query: 97 tttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaa 156 |||||||||||||| ||||| | |||||||||| ||| |||||| ||||||||||| || Sbjct: 725 tttttactcttattaaatcgtg-taaagtattcaaatccaataaagatttcgcgggcaaa 667 Query: 157 tatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnn 216 |||||||||||| ||||||||||||||||||||||| |||||||||||| ||| Sbjct: 666 tatttactctttactgtcttatttgttaatttataaccttaccaaataaagcaatttttt 607 Query: 217 nggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatg 276 |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| Sbjct: 606 tggtttgttccgccatcccacccaatgaagtattaggattcttttcaaaaaaatcctatg 547 Query: 277 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 336 || ||||||||| |||||||||||| ||||||| || |||| |||||| ||||||| ||| Sbjct: 546 gagtcataggttttgtcgttcccacagcttctcttttaatgcttaggtttgaatcctgca 487 Query: 337 acggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcgg 396 | |||||||||||||||||||||||||||| |||||||||||||||||||||||| || | Sbjct: 486 atggagcttccaaaaaatttctttccgagtcaattttctcagttttattaacccgagctg 427 Query: 397 ctctttattattgcttaaaatttgtagttcttctttcaagttacaatttttcattctcta 456 ||| ||||||||| || |||||| || || || ||||||||||| ||||| ||||| | Sbjct: 426 ctccttattattgttttaaatttttatttattgtttcaagttacgattttgaattctttc 367 Query: 457 ttagttttattatattgatgctttttcacattgccttttatgatgtaattcatagaccat 516 || |||| || | |||||||||| ||||||||||||||||||||| |||||||| |||| Sbjct: 366 tt--ttttttttttttgatgctttatcacattgccttttatgatgtcattcatagcccat 309 Query: 517 acacagnggaattctatatcttatttatttcctcttccttctttctatcatccctccctt 576 ||||| ||||| ||| || | ||| || |||||||||| | |||||||||||| || Sbjct: 308 acacataggaatcctaagtccttctta-ttattcttccttctatgtatcatccctccttt 250 Query: 577 tatccacatccctttagttttgcttcacaac 607 |||||||||||||||||||||| |||||||| Sbjct: 249 tatccacatccctttagttttggttcacaac 219
>gb|AY847075.1| Karroochloa purpurea ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1053 Score = 468 bits (236), Expect = e-128 Identities = 448/519 (86%), Gaps = 7/519 (1%) Strand = Plus / Minus Query: 97 tttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaa 156 |||||| ||||||||||| ||||||||||| ||| |||||| |||||||||||||| Sbjct: 722 tttttagtcttattgaattatagtaaagtattcgaatccaataaatatttcgcgggcgaa 663 Query: 157 tatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnn 216 |||||||||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 662 tatttactctttcctgtcttatttgttaatttataattttaccaaataaagcaagttttg 603 Query: 217 nggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatg 276 |||||||||||||||||||||| |||| || |||||||||||||||||||||||||||| Sbjct: 602 gggtttgttccgccatcccacccgatgatgtattaggattcttttcaataaaatcctatg 543 Query: 277 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 336 | ||||||||| ||||||||||| |||||||||| ||||||||||| ||||||| ||| Sbjct: 542 cagtcataggttttgtcgttcccatagcttctcctttaatggttaggtttgaatcctgca 483 Query: 337 acggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcgg 396 | |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 482 atggagcttcaaaaaaatttcttttcgagttaattttctcagttttattaacccgggctg 423 Query: 397 ctctttattattgcttaaaatttgtagttcttctttcaagttacaatttttcattctcta 456 |||||||||||| ||| ||||| | | || |||||||||||||||| ||||||| Sbjct: 422 ctctttattatttctttcaattttgattagttgtttcaagttacaatttcaaattctctc 363 Query: 457 ttagttttattatattgatgctttttcacattgccttttatgatgtaattcatagaccat 516 || |||| |||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 362 tt--tttt----tattgatgctttatcacattgccttttatgatgtaattcatagaccat 309 Query: 517 acacagnggaattctatatcttatttatttcctcttccttctttctatcatccctccctt 576 |||| ||||| ||||||| | ||| || |||||||||| |||||||||||||| || Sbjct: 308 acacgttggaatcctatatccttctta-ttattcttccttctatctatcatccctccttt 250 Query: 577 tatccacatccctttagttttgcttcacaacctanaatc 615 ||||||||||| |||| ||||| ||||||||||| |||| Sbjct: 249 tatccacatccttttacttttgtttcacaacctagaatc 211
>gb|AF133464.1|AF133464 Lithachne pauciflora ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1189 Score = 466 bits (235), Expect = e-128 Identities = 444/514 (86%), Gaps = 8/514 (1%) Strand = Plus / Minus Query: 102 actcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaatattt 161 |||||||||||||||| ||||||| ||| | ||||||||| ||||||||||||||||||| Sbjct: 758 actcttattgaatcgcagtaaagttttccacttcaataaggatttcgcgggcgaatattt 699 Query: 162 actctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnnggtt 221 |||||||||| |||||||||||||||||||| ||||| ||||||||||| |||| Sbjct: 698 actctttcctatcttatttgttaatttataaccttactaaataagacaatttttttggtt 639 Query: 222 tgttccgccatcccaccc--aatgaagtgttaggattcttttcaataaaatcctatggaa 279 |||||||||||||| ||| ||||||| |||| ||||||||||| ||||| |||| | Sbjct: 638 tgttccgccatccctcccctaatgaagaattagaattcttttcaaaaaaattctatacag 579 Query: 280 tcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacg 339 ||||||||||| ||||||||||| ||||||||| ||||||||||||||||| || ||| | Sbjct: 578 tcataggttctatcgttcccactacttctcctttaatggttaggtctgaattccacaatg 519 Query: 340 gagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctc 399 ||| ||||||||||| |||||| |||| ||||||||||||||||||||||| | |||| Sbjct: 518 gagtttccaaaaaatatctttctgagtcaattttctcagttttattaaccccagttgctc 459 Query: 400 tttat-----tattgcttaaaatttgtagttcttctttcaagttacaatttttcattctc 454 |||| ||||||||||||||| || ||||| ||||||||||| |||| |||||| Sbjct: 458 cttattattgtattgcttaaaatttatatttcttgtttcaagttacgatttcaaattctc 399 Query: 455 tattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagacc 514 || || |||||||||||||||||||| | ||||||||||||||||||||| ||||||||| Sbjct: 398 taatatttttattatattgatgctttattacattgccttttatgatgtaactcatagacc 339 Query: 515 atacacagnggaattctatatcttatttatttcctcttccttctttctatcatccctccc 574 ||||| ||| | ||| ||||| ||| ||||||||||||||||||||||||||||| Sbjct: 338 atacatgtgggagtcctacatctttatta-ttcctcttccttctttctatcatccctcct 280 Query: 575 tttatccacatccctttagttttgcttcacaacc 608 ||||||||||||| |||||||||||||||||||| Sbjct: 279 tttatccacatccttttagttttgcttcacaacc 246
>gb|AF133490.1|AF133490 Streptochaeta angustifolia ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1243 Score = 458 bits (231), Expect = e-125 Identities = 464/538 (86%), Gaps = 10/538 (1%) Strand = Plus / Minus Query: 86 aaatatccttatttttactcttattgaatcgcggtaaagta-----ttctaattcaataa 140 |||| ||||||||||||||||||||||||| |||||||||| || |||| |||||| Sbjct: 807 aaatctccttatttttactcttattgaatcacggtaaagtaaagtattgtaatccaataa 748 Query: 141 gaatttcgcgggcgaatatttactctttcctgtcttatttgttaatttataaacttacca 200 ||||||||||||||||||||||||||||||||||||| || |||| | || ||||||| Sbjct: 747 agatttcgcgggcgaatatttactctttcctgtcttattcgtcaattcaaaaccttacca 688 Query: 201 aataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc-tt 259 ||||| ||| |||||||||||||||||||||||||||||| ||||||||| || Sbjct: 687 aataaagcaatttttttggtttgttccgccatcccacccaatgaagtattaggattcgtt 628 Query: 260 ttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatggt 319 ||||||||||||||||| | |||||||||||||||||||||| |||||||| |||||| Sbjct: 627 ttcaataaaatcctatgtagtcataggttctgtcgttcccacagcttctccactaatggt 568 Query: 320 taggtctgaatcccgcaacggagcttccaa-aaaatttctttccgagttaattttctcag 378 |||||||||| || |||| ||||||||||| ||||||||||||||||| |||||||||| Sbjct: 567 taggtctgaaccctgcaatggagcttccaacaaaatttctttccgagtccattttctcag 508 Query: 379 ttttattaacccgggcggctctttattattgcttaaaatttgtagttcttctttcaagtt 438 |||||||||||| || ||||||||||||| ||| | || || ||||| ||||||||| Sbjct: 507 ttttattaacccaggttgctctttattatttcttttca-ttctatttcttgtttcaagtt 449 Query: 439 acaatttttcattctctattagttttattatattgatgctttttcacattgccttttatg 498 || |||| |||||| ||| || ||||||||||||||||| ||||| ||||||||||| Sbjct: 448 acgatttggaattctcagttatttatattatattgatgctttatcacactgccttttatg 389 Query: 499 atgtaattcatagaccatacacagnggaattctatatcttatttatttcctcttccttct 558 ||||||||||| ||||||||| | ||||| ||||||||| ||| ||||| ||| |||| Sbjct: 388 atgtaattcatggaccatacatattggaatcctatatctttctta-ttcctgttctttct 330 Query: 559 ttctatcatccctccctttatccacatccctttagttttgcttcacaacctanaatcc 616 ||||||||||||||| |||||||||||||||||| ||||||||| ||||||| ||||| Sbjct: 329 ttctatcatccctccatttatccacatcccttta-ttttgcttcgcaacctagaatcc 273
>gb|AY847109.1| Zeugites munroanus ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 952 Score = 452 bits (228), Expect = e-124 Identities = 411/473 (86%), Gaps = 5/473 (1%) Strand = Plus / Minus Query: 128 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 187 |||||| |||||| |||||||||| |||| |||||||||||||| |||||||||||||| Sbjct: 593 tctaatccaataaagatttcgcgggggaatgtttactctttcctgccttatttgttaatt 534 Query: 188 tataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagt 247 ||||| |||||||||||| | | |||||||||||||||||||||||||||||| Sbjct: 533 tataaccttaccaaataaagccatttttttggtttgttccgccatcccacccaatgaagt 474 Query: 248 gttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 307 |||||||||||||| |||||||||||| | ||||||||| | |||||||||| ||||| Sbjct: 473 attaggattcttttccataaaatcctatctagtcataggttttttcgttcccacagcttc 414 Query: 308 tccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagtt 367 ||||| ||||||||||| ||||||| |||| |||||||||||||||||||||||||||| Sbjct: 413 tcctttaatggttaggtttgaatcctgcaatggagcttccaaaaaatttctttccgagtc 354 Query: 368 aattttctcagttttattaacccgggcggctctttattattgcttaaaatttgtagttct 427 ||||||||||||||||||||| ||||| ||||||| ||||||||| |||||| || || | Sbjct: 353 aattttctcagttttattaactcgggctgctcttttttattgcttgaaatttttatttat 294 Query: 428 tctttcaagttacaatttttcattctctattagtt----ttattatattgatgctttttc 483 | ||||||||||| |||| ||||||| || || |||||||||||||||||| || Sbjct: 293 tgtttcaagttacgatttcaaattctctctttttttttcttattatattgatgctttatc 234 Query: 484 acattgccttttatgatgtaattcatagaccatacacagnggaattctatatcttattta 543 |||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||| Sbjct: 233 acattgccttttatgatgtaattcatagaccatacacatgggaatcctatatctttctta 174 Query: 544 tttcctcttccttctttctatcatccctccctttatccacatccctttagttt 596 ||| | |||||||| ||||||||||||| ||||||||||||||||| |||| Sbjct: 173 -ttctttttccttctacctatcatccctccttttatccacatcccttttgttt 122
>gb|AY847108.1| Zeugites mexicanus ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1056 Score = 452 bits (228), Expect = e-124 Identities = 411/473 (86%), Gaps = 5/473 (1%) Strand = Plus / Minus Query: 128 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 187 |||||| |||||| ||||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 703 tctaatccaataaagatttcgcgggcgaatgtttactctttcctgccttatttgttaatt 644 Query: 188 tataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagt 247 ||||| |||||||||||| | | |||||||||||||||||||||||||||||| Sbjct: 643 tataaccttaccaaataaagccatttttttggtttgttccgccatcccacccaatgaagt 584 Query: 248 gttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 307 |||||||||||||| |||||||||||| | ||||||||| | |||||||||| ||||| Sbjct: 583 attaggattcttttccataaaatcctatccagtcataggttttttcgttcccacagcttc 524 Query: 308 tccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagtt 367 ||||| ||||||||||| ||||||| |||| ||||||||||||||||||||||||| || Sbjct: 523 tcctttaatggttaggtttgaatcctgcaatggagcttccaaaaaatttctttccgggtc 464 Query: 368 aattttctcagttttattaacccgggcggctctttattattgcttaaaatttgtagttct 427 ||||||||||||||||||||| ||||| ||||||| ||||||||| |||||| || || | Sbjct: 463 aattttctcagttttattaactcgggctgctcttttttattgctttaaatttttatttat 404 Query: 428 tctttcaagttacaatttttcattctctattagtttt----attatattgatgctttttc 483 | ||||||||||| |||| ||||||| || |||| |||||||||||||||| || Sbjct: 403 tgtttcaagttacgatttcgaattctctctttttttttctaattatattgatgctttatc 344 Query: 484 acattgccttttatgatgtaattcatagaccatacacagnggaattctatatcttattta 543 |||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||| Sbjct: 343 acattgccttttatgatgtaattcatagaccatacacatgggaatcctatatctttctta 284 Query: 544 tttcctcttccttctttctatcatccctccctttatccacatccctttagttt 596 ||| | |||||||| ||||||||||||| ||||||||||||||||| |||| Sbjct: 283 -ttctttttccttctacctatcatccctccttttatccacatcccttttgttt 232
>gb|AF133481.1|AF133481 Chloris distichophylla ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1180 Score = 446 bits (225), Expect = e-122 Identities = 440/513 (85%), Gaps = 21/513 (4%) Strand = Plus / Minus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 |||||| ||||||||||| ||||||||||||||| |||||| ||||||||||||||| Sbjct: 766 ttttacccttattgaatcatagtaaagtattctaatccaataaagatttcgcgggcgaat 707 Query: 158 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 217 |||||||||||| |||||||||||||||||||||| |||| |||||||||||| Sbjct: 706 atttactctttcttgtcttatttgttaatttataaccttatcaaataagacaattttttt 647 Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataa----aatcct 273 |||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| Sbjct: 646 ggtttgttccgccatcccgcccaatgaagtattaggattcttttcaataaaatcaatcct 587 Query: 274 atggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatccc 333 ||| | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||||| Sbjct: 586 atgcagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcct 527 Query: 334 gcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccggg 393 ||||||||| ||||||| ||||||||||||||||||| ||||||||||||| ||| Sbjct: 526 gcaacggagtttccaaa------ctttccgagttaattttcttagttttattaacctggg 473 Query: 394 cggctctttattattgcttaaaatttgtagttcttctttc--aagttacaatttttcatt 451 | ||||||||||||||||| |||||| || || || |||| || |||| ||||| ||| Sbjct: 472 ctgctctttattattgcttcaaatttttatttattgtttcaaaaattacgattttaaatt 413 Query: 452 ctctattagtttt--------attatattgatgctttttcacattgccttttatgatgta 503 |||| ||| |||| |||||||||||||||| |||||||||||||||||||||| Sbjct: 412 ctctcttatttttattattttattatattgatgctttatcacattgccttttatgatgta 353 Query: 504 attcatagaccatacacagnggaattctatatcttatttatttcctcttccttctttcta 563 |||||||||||||||||| ||||| |||||||| ||| ||| |||||||||| |||| Sbjct: 352 attcatagaccatacacattggaatcttatatctttctta-ttcttcttccttctatcta 294 Query: 564 tcatccctccctttatccacatccctttagttt 596 |||||||||| ||||||||||||||||| |||| Sbjct: 293 tcatccctccttttatccacatcccttttgttt 261 Score = 163 bits (82), Expect = 9e-37 Identities = 138/156 (88%), Gaps = 6/156 (3%) Strand = Plus / Minus Query: 461 ttttattatattgatgctttttcacattgccttttatgatgtaattcatagaccatacac 520 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 395 ttttattatattgatgctttatcacattgccttttatgatgtaattcatagaccatacac 336 Query: 521 agnggaattctatatcttatttatttcctcttccttctttctatcatccctccctttatc 580 | ||||| |||||||| ||||| | |||||||||| |||||||||||||| |||||| Sbjct: 335 attggaatcttatatctttcttatt-cttcttccttctatctatcatccctccttttatc 277 Query: 581 cacatccctttagttttgcttcacaacctanaatcc 616 ||||||||||| |||| ||||||||| ||||| Sbjct: 276 cacatcccttttgttt-----cacaacctagaatcc 246 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatcca 24 ||||||||||||||||||||||| Sbjct: 842 aaagaagatctagaatatatcca 820
>gb|AF133479.1|AF133479 Eleusine indica ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1091 Score = 444 bits (224), Expect = e-121 Identities = 459/539 (85%), Gaps = 21/539 (3%) Strand = Plus / Minus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 |||||| ||||||||||| ||||||||||||||| |||||| ||||||||||||||| Sbjct: 782 ttttacccttattgaatcatagtaaagtattctaatccaataaagatttcgcgggcgaat 723 Query: 158 atttactctttcctgtcttatttgttaatttataaactt------accaaataagacaan 211 |||||||||||| |||||||||||||||||||||| ||| | ||||||| |||| Sbjct: 722 atttactctttcttgtcttatttgttaatttataaccttattaaaatcaaataaaacaat 663 Query: 212 nnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatc 271 |||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 662 ttttttggtttgttccgccatcccgcccaatgaagtattaggattcttttcaataaaatc 603 Query: 272 ----ctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctg 327 ||||| | ||||||||| |||||||||||| |||||||||| ||||||||||| || Sbjct: 602 aatcctatgcagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttg 543 Query: 328 aatcccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaa 387 ||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||| Sbjct: 542 aatcctgcaacggagcttccaaacttaaactttccgagttaattttcttagttttattaa 483 Query: 388 cccgggcggctctttattattgcttaaaatttgtagttcttctttc--aagttacaattt 445 || |||| |||||||||||||||||||||||| || || || |||| || ||| |||| Sbjct: 482 cctgggctgctctttattattgcttaaaatttttatttattgtttcaaaaattatgattt 423 Query: 446 ttcattctctattagttttatta--------tattgatgctttttcacattgccttttat 497 | ||||||| ||| |||||||| |||||||||||| |||||||||||||||| Sbjct: 422 taaattctctcttatttttattattttattatattgatgctttatcacattgccttttat 363 Query: 498 gatgtaattcatagaccatacacagnggaattctatatcttatttatttcctcttccttc 557 |||||||||||||||||||||||| ||||| |||||||| ||| ||| ||||||||| Sbjct: 362 gatgtaattcatagaccatacacattggaatcttatatctttctta-ttcttcttccttc 304 Query: 558 tttctatcatccctccctttatccacatccctttagttttgcttcacaacctanaatcc 616 | |||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 303 tatctatcatccctccttttatccacatccctttagttttgtttcacaacctagaatcc 245 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatcc 23 |||||||||||||||||||||| Sbjct: 860 aaagaagatctagaatatatcc 839
>gb|AY847110.1| Zeugites pringlei ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1060 Score = 436 bits (220), Expect = e-119 Identities = 403/465 (86%), Gaps = 5/465 (1%) Strand = Plus / Minus Query: 128 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 187 |||||| |||||| ||||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 707 tctaatccaataaagatttcgcgggcgaatgtttactctttcctgccttatttgttaatt 648 Query: 188 tataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagt 247 || || |||||||||||| | | |||||||||||||||||||||||||||||| Sbjct: 647 taaaatcttaccaaataaagccatttttttggtttgttccgccatcccacccaatgaagt 588 Query: 248 gttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 307 |||||||||||||| |||||||||||| | ||||||||| | |||||||||| ||||| Sbjct: 587 attaggattcttttccataaaatcctatccagtcataggttttttcgttcccacagcttc 528 Query: 308 tccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagtt 367 ||||| ||||||||||| ||||||| |||| ||||||||||||||||||||||||| || Sbjct: 527 tcctttaatggttaggtttgaatcctgcaatggagcttccaaaaaatttctttccgggtc 468 Query: 368 aattttctcagttttattaacccgggcggctctttattattgcttaaaatttgtagttct 427 ||||||||||||||||||||| ||||| ||||||| ||||||||| |||||| || || | Sbjct: 467 aattttctcagttttattaactcgggctgctcttttttattgctttaaatttttatttat 408 Query: 428 tctttcaagttacaatttttcattctctattagtt----ttattatattgatgctttttc 483 | ||||||||||| |||| ||||||| || || |||||||||||||||||| || Sbjct: 407 tgtttcaagttacgatttcgaattctctctttttttttcttattatattgatgctttatc 348 Query: 484 acattgccttttatgatgtaattcatagaccatacacagnggaattctatatcttattta 543 |||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||| Sbjct: 347 acattgccttttatgatgtaattcatagaccatacacattggaatactatatctttctta 288 Query: 544 tttcctcttccttctttctatcatccctccctttatccacatccc 588 ||| | |||||||| ||||||||||||| |||||||||||||| Sbjct: 287 -ttctttttccttctacctatcatccctccttttatccacatccc 244
>gb|AF133484.1|AF133484 Phragmites australis ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1199 Score = 432 bits (218), Expect = e-118 Identities = 292/319 (91%) Strand = Plus / Minus Query: 94 ttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggc 153 ||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||| Sbjct: 777 ttatttttactcttattgaatcgtggtaaagtattctaatccaataaagatttcgcgggc 718 Query: 154 gaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannn 213 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 717 gaatatttactctttcctgtcttatttgttaatttataaccttaccaaataagacaattt 658 Query: 214 nnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcct 273 |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| Sbjct: 657 ttttggtttgttccgccatcccacccaatgaagtattaggattcttttgaataaaatcct 598 Query: 274 atggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatccc 333 ||| | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||||| Sbjct: 597 atgcagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcct 538 Query: 334 gcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccggg 393 |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct: 537 gcaatggagcttccaaaaaatttctttccgagtcaattttctcagttttattaaccccgg 478 Query: 394 cggctctttattattgctt 412 |||| |||||||||||| Sbjct: 477 ttgctccttattattgctt 459 Score = 218 bits (110), Expect = 2e-53 Identities = 145/156 (92%), Gaps = 1/156 (0%) Strand = Plus / Minus Query: 461 ttttattatattgatgctttttcacattgccttttatgatgtaattcatagaccatacac 520 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 398 ttttattatattgatgctttatcacattgccttttatgatgtaattcatagaccatacac 339 Query: 521 agnggaattctatatcttatttatttcctcttccttctttctatcatccctccctttatc 580 | ||||| ||||||||| ||| ||| |||||||||| |||||||||||||| |||||| Sbjct: 338 attggaatcctatatctttctta-ttcttcttccttctatctatcatccctccttttatc 280 Query: 581 cacatccctttagttttgcttcacaacctanaatcc 616 |||||||||||||||||||||||||||||| ||||| Sbjct: 279 cacatccctttagttttgcttcacaacctagaatcc 244 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatat 21 |||||||||||||||||||| Sbjct: 849 aaagaagatctagaatatat 830
>gb|AY847077.1| Stipagrostis zeyheri ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1146 Score = 430 bits (217), Expect = e-117 Identities = 393/452 (86%), Gaps = 12/452 (2%) Strand = Plus / Minus Query: 174 cttatttgttaatttataaacttaccaaataagacaannnnnnnggtttgttccgccatc 233 ||||||||||||||||||| || ||||||||| ||| |||||||||||||||| Sbjct: 669 cttatttgttaatttataatct-accaaataaagcaatttttttggtttgttccgccatc 611 Query: 234 ccacccaatgaagtgttaggattcttttcaataaaa--tcctatggaatcataggttctg 291 |||||||||||||| |||||||||||||||| |||| ||||||| | ||||||||| || Sbjct: 610 ccacccaatgaagtattaggattcttttcaaaaaaaaatcctatgcagtcataggttttg 551 Query: 292 tcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaa 351 |||||||||| |||||||||| ||||||||||| ||||||| |||| ||||||||||||| Sbjct: 550 tcgttcccacagcttctcctttaatggttaggtttgaatcctgcaatggagcttccaaaa 491 Query: 352 aatttctttccgagttaattttctcagttttattaacccgggcggctctttattattgct 411 ||||||||||||||| |||||||||||||||||||||||| || |||||||||||||||| Sbjct: 490 aatttctttccgagtcaattttctcagttttattaacccgagctgctctttattattgct 431 Query: 412 taaaatttgtagttcttctttcaagttacaatttttcattctctattagttt-------- 463 | |||||| || || || |||||||||| ||||| ||||| | ||| ||| Sbjct: 430 ttaaatttttattttttgtttcaagttatgattttgaattctttcttatttttaatattt 371 Query: 464 tattatattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagn 523 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 370 tattatattgatgctttatcacattgccttttatgatgtaattcatagaccatacatatt 311 Query: 524 ggaattctatatcttatttatttcctcttccttctttctatcatccctccctttatccac 583 ||||| ||||||| | ||| ||| |||||||||| |||||||||||||| ||||||||| Sbjct: 310 ggaatcctatatccttctta-ttcttcttccttctatctatcatccctccttttatccac 252 Query: 584 atccctttagttttgcttcacaacctanaatc 615 ||||||||||||||||||||||||||| |||| Sbjct: 251 atccctttagttttgcttcacaacctagaatc 220 Score = 69.9 bits (35), Expect = 1e-08 Identities = 41/43 (95%) Strand = Plus / Minus Query: 97 tttttactcttattgaatcgcggtaaagtattctaattcaata 139 |||||||||||||||||||| |||||||||||||||| ||||| Sbjct: 712 tttttactcttattgaatcgtggtaaagtattctaatccaata 670
>dbj|AK059459.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-C07, full insert sequence Length = 352 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Minus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 337 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 278 Query: 158 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 217 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 277 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 218 Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 217 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 158 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 157 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 98 Query: 338 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 397 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 97 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 39 Query: 398 tctttattattgcttaaaatttgtagttcttctttcaa 435 ||||| ||||| ||| ||||||||| ||||| |||||| Sbjct: 38 tctttgttattccttgaaatttgtatttcttgtttcaa 1
>gb|AY847104.1| Zeugites sylvaticus ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1051 Score = 418 bits (211), Expect = e-114 Identities = 357/406 (87%), Gaps = 9/406 (2%) Strand = Plus / Minus Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 597 ggtttgttccgccatcccacccaatgaagtattaggattcttttcaataaaatcctatcc 538 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||||| |||| Sbjct: 537 agtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgcaa 478 Query: 338 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 397 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || Sbjct: 477 tggagcttccaaaaaatttctttccgagtcaattttctcagttttattaacccgggctgc 418 Query: 398 tctttattattgcttaaaatttgtagttcttctttcaagttacaatttttcattctctat 457 ||||| ||||||||| ||||| || || || ||||||||||| |||| ||||||| | Sbjct: 417 tcttttttattgcttgcaatttttatttattgtttcaagttacgatttcgaattctctct 358 Query: 458 tagttttattat--------attgatgctttttcacattgccttttatgatgtaattcat 509 | |||| |||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 357 tttttttcttattttattatattgatgctttatcacattgccttttatgatgtaattcat 298 Query: 510 agaccatacacagnggaattctatatcttatttatttcctcttccttctttctatcatcc 569 |||||||||||| ||||| ||||||||| ||| ||| | |||||||| ||||||||| Sbjct: 297 agaccatacacattggaatcctatatctttctta-ttctttttccttctacctatcatcc 239 Query: 570 ctccctttatccacatccctttagttttgcttcacaacctanaatc 615 |||| |||||||||||||||||||||||| ||||||||||| |||| Sbjct: 238 ctccttttatccacatccctttagttttgtttcacaacctagaatc 193 Score = 107 bits (54), Expect = 4e-20 Identities = 72/78 (92%) Strand = Plus / Minus Query: 128 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 187 |||||| |||||| ||||| |||||||||| ||||||||||||||||||||||| ||||| Sbjct: 686 tctaatccaataaaaatttagcgggcgaatgtttactctttcctgtcttatttggtaatt 627 Query: 188 tataaacttaccaaataa 205 ||||| |||||||||||| Sbjct: 626 tataaccttaccaaataa 609
>gb|AY847098.1| Chasmanthium latifolium ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1132 Score = 416 bits (210), Expect = e-113 Identities = 422/491 (85%), Gaps = 6/491 (1%) Strand = Plus / Minus Query: 128 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 187 |||||| |||||| ||||||||||||||||||||||| | || ||| | |||| |||| Sbjct: 679 tctaatccaataaagatttcgcgggcgaatatttactcatgccagtcct--ttgt-aatt 623 Query: 188 tataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagt 247 |||| |||||||||||| ||| || | | ||||||||||||||||||||||| Sbjct: 622 gataaccttaccaaataaagcaatttttttggctaggtccgccatcccacccaatgaagt 563 Query: 248 gttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 307 |||||||||||||||||||||||||||| | ||||||||| | |||||||||| ||||| Sbjct: 562 attaggattcttttcaataaaatcctatgcagtcataggttttctcgttcccacagcttc 503 Query: 308 tccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagtt 367 ||||| |||||||||| ||||||| |||| |||||||||||||||||||||||||||| Sbjct: 502 tcctttcatggttaggtttgaatcctgcaatggagcttccaaaaaatttctttccgagtc 443 Query: 368 aattttctcagttttattaacccgggcggctctttattattgcttaaaatttgtagttct 427 ||||||||||||||||||||||| ||| ||||||| ||||||||| ||||| || || | Sbjct: 442 aattttctcagttttattaacccaggctgctcttttttattgctttcaatttttatttat 383 Query: 428 tctttcaagttacaatttttcat--tctctattagttttattatattgatgctttttcac 485 | |||||||||||||||| || ||||| || |||||||||||||||||||| |||| Sbjct: 382 tgtttcaagttacaatttcgaattctctcttttttttttattatattgatgctttatcac 323 Query: 486 attgccttttatgatgtaattcatagaccatacacagnggaattctatatcttatttatt 545 |||||||||||||||||||||||||||||||||||| ||||| ||||||||| | | | Sbjct: 322 attgccttttatgatgtaattcatagaccatacacattggaatcctatatctt-tcttct 264 Query: 546 tcctcttccttctttctatcatccctccctttatccacatccctttagttttgcttcaca 605 || |||||||||| ||| |||||||||| ||||| | |||||||||||| |||||||||| Sbjct: 263 tcttcttccttctatctctcatccctccttttatgcccatccctttagtgttgcttcaca 204 Query: 606 acctanaatcc 616 ||||| ||||| Sbjct: 203 acctagaatcc 193 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatcca 24 ||||||||||||||||||||||| Sbjct: 776 aaagaagatctagaatatatcca 754
>gb|AF133486.1|AF133486 Molinia caerulea ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1211 Score = 406 bits (205), Expect = e-110 Identities = 291/322 (90%) Strand = Plus / Minus Query: 94 ttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggc 153 ||||||||||||||||||||||| |||||||||| |||| |||||| ||||||||||| Sbjct: 779 ttatttttactcttattgaatcgtggtaaagtatcttaatccaataaagatttcgcgggc 720 Query: 154 gaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannn 213 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct: 719 gaatatttactctttcctgtcttatttgttaatttataaccttaccaaataaagcaattt 660 Query: 214 nnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcct 273 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 659 ttttggtttgttccgccatcccacccaatgaagtattaggattcttttcaataaaatcct 600 Query: 274 atggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatccc 333 ||| | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||| | Sbjct: 599 atgcagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaattct 540 Query: 334 gcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccggg 393 |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct: 539 gcaatggagcttccaaaaaatttctttccgagtcaattttctcagttttattaaccccgg 480 Query: 394 cggctctttattattgcttaaa 415 |||| ||||||||||||||| Sbjct: 479 ttgctccttattattgcttaaa 458 Score = 218 bits (110), Expect = 2e-53 Identities = 145/156 (92%), Gaps = 1/156 (0%) Strand = Plus / Minus Query: 461 ttttattatattgatgctttttcacattgccttttatgatgtaattcatagaccatacac 520 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 400 ttttattatattgatgctttatcacattgccttttatgatgtaattcatagaccatacac 341 Query: 521 agnggaattctatatcttatttatttcctcttccttctttctatcatccctccctttatc 580 | ||||| ||||||||| ||| ||| |||||||||| |||||||||||||| |||||| Sbjct: 340 attggaatcctatatctttctta-ttcttcttccttctatctatcatccctccttttatc 282 Query: 581 cacatccctttagttttgcttcacaacctanaatcc 616 |||||||||||||||||||||||||||||| ||||| Sbjct: 281 cacatccctttagttttgcttcacaacctagaatcc 246 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatat 21 |||||||||||||||||||| Sbjct: 853 aaagaagatctagaatatat 834
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 402 bits (203), Expect = e-109 Identities = 300/332 (90%), Gaps = 2/332 (0%) Strand = Plus / Plus Query: 91 tccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcg 150 ||||| |||||| ||||||||||||| |||||||||||||||| ||||||| |||||||| Sbjct: 1320 tccttttttttattcttattgaatcgtggtaaagtattctaatccaataaggatttcgcg 1379 Query: 151 ggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaa 210 ||||||||||||||||||||||||||||||||||||||| || |||| ||||||| ||| Sbjct: 1380 ggcgaatatttactctttcctgtcttatttgttaatttagaaccttatcaaataaagcaa 1439 Query: 211 nnnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaat 270 ||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1440 tttttttggtttgttccgccatcccacccaatgaagtgttaggattctttccaataaaat 1499 Query: 271 cctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaat 330 |||||| | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||| Sbjct: 1500 cctatgtagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaat 1559 Query: 331 cccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaaccc 390 || |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1560 cctgcaatggagcttccaaaaaatttctttccgagtcaattttctcagttttattaaccc 1619 Query: 391 gggcggctcttta-ttattgcttaaaatttgt 421 ||| |||||||| ||||||||| | |||||| Sbjct: 1620 -ggctgctctttatttattgctttatatttgt 1650 Score = 167 bits (84), Expect = 5e-38 Identities = 141/159 (88%), Gaps = 5/159 (3%) Strand = Plus / Plus Query: 461 ttttattatattgatgctttttcacattgcctttt----atgatgtaattcatagaccat 516 |||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| Sbjct: 1704 ttttattatattgatgctttatcacattgccttttttttatgatgtaattcataaaccat 1763 Query: 517 acacagnggaattctatatcttatttatttcctcttccttctttctatcatccctccctt 576 ||||| ||||| ||||||||| ||||| | |||||||||| |||||||||||||| || Sbjct: 1764 acacatgggaatcctatatctttcttatt-cttcttccttctatctatcatccctccttt 1822 Query: 577 tatccacatccctttagttttgcttcacaacctanaatc 615 |||||| |||||||||||||||||||||| |||| |||| Sbjct: 1823 tatccagatccctttagttttgcttcacagcctagaatc 1861 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 aaagaagatctagaatatatc 22 ||||||||||||||||||||| Sbjct: 1253 aaagaagatctagaatatatc 1273
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 402 bits (203), Expect = e-109 Identities = 300/332 (90%), Gaps = 2/332 (0%) Strand = Plus / Plus Query: 91 tccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcg 150 ||||| |||||| ||||||||||||| |||||||||||||||| ||||||| |||||||| Sbjct: 80877 tccttttttttattcttattgaatcgtggtaaagtattctaatccaataaggatttcgcg 80936 Query: 151 ggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaa 210 ||||||||||||||||||||||||||||||||||||||| || |||| ||||||| ||| Sbjct: 80937 ggcgaatatttactctttcctgtcttatttgttaatttagaaccttatcaaataaagcaa 80996 Query: 211 nnnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaat 270 ||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 80997 tttttttggtttgttccgccatcccacccaatgaagtgttaggattctttccaataaaat 81056 Query: 271 cctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaat 330 |||||| | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||| Sbjct: 81057 cctatgtagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaat 81116 Query: 331 cccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaaccc 390 || |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 81117 cctgcaatggagcttccaaaaaatttctttccgagtcaattttctcagttttattaaccc 81176 Query: 391 gggcggctcttta-ttattgcttaaaatttgt 421 ||| |||||||| ||||||||| | |||||| Sbjct: 81177 -ggctgctctttatttattgctttatatttgt 81207 Score = 167 bits (84), Expect = 5e-38 Identities = 141/159 (88%), Gaps = 5/159 (3%) Strand = Plus / Plus Query: 461 ttttattatattgatgctttttcacattgcctttt----atgatgtaattcatagaccat 516 |||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| Sbjct: 81261 ttttattatattgatgctttatcacattgccttttttttatgatgtaattcataaaccat 81320 Query: 517 acacagnggaattctatatcttatttatttcctcttccttctttctatcatccctccctt 576 ||||| ||||| ||||||||| ||||| | |||||||||| |||||||||||||| || Sbjct: 81321 acacatgggaatcctatatctttcttatt-cttcttccttctatctatcatccctccttt 81379 Query: 577 tatccacatccctttagttttgcttcacaacctanaatc 615 |||||| |||||||||||||||||||||| |||| |||| Sbjct: 81380 tatccagatccctttagttttgcttcacagcctagaatc 81418 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 aaagaagatctagaatatatc 22 ||||||||||||||||||||| Sbjct: 80810 aaagaagatctagaatatatc 80830
>gb|AF133459.1|AF133459 Ehrharta calycina ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1192 Score = 398 bits (201), Expect = e-108 Identities = 299/334 (89%) Strand = Plus / Minus Query: 102 actcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaatattt 161 |||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 746 actcctattgaatcacggtaaagtattctaattcaataaggatttcgcgggcgaatattt 687 Query: 162 actctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnnggtt 221 |||||||||||||||||||||||||| |||| |||| |||||||||||| |||| Sbjct: 686 actctttcctgtcttatttgttaattcataaccttatcaaataagacaatttttttggtt 627 Query: 222 tgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatc 281 |||||||||||||||||||||||||| |||||||||||||||||||||||||||| | || Sbjct: 626 tgttccgccatcccacccaatgaagtattaggattcttttcaataaaatcctatgcagtc 567 Query: 282 ataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacgga 341 || |||||||||||||||| |||||||| | |||| |||||| | ||| ||||| ||| Sbjct: 566 atgagttctgtcgttcccacagcttctcccttaatgattaggtttaaatttcgcaatgga 507 Query: 342 gcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctctt 401 |||| |||||||||||||||||||| |||| | |||||||||||||||||| | |||||| Sbjct: 506 gctttcaaaaaatttctttccgagtcaattctatcagttttattaacccggaccgctctt 447 Query: 402 tattattgcttaaaatttgtagttcttctttcaa 435 ||||||||||||||||||||| ||||| |||||| Sbjct: 446 tattattgcttaaaatttgtatttcttgtttcaa 413 Score = 139 bits (70), Expect = 1e-29 Identities = 135/156 (86%), Gaps = 6/156 (3%) Strand = Plus / Minus Query: 466 ttatattgatgctttttcacattgccttttatg-----atgtaattcatagaccatacac 520 ||||||||||||||| |||||||||||||||| || |||||||||||||||||| Sbjct: 386 ttatattgatgctttatcacattgccttttattttattatttaattcatagaccatacat 327 Query: 521 agnggaattctatatcttatttatttcctcttccttctttctatcatccctccctttatc 580 | ||||| ||||||||| |||||| |||||||||||||||||||| |||| |||||| Sbjct: 326 attggaatcctatatctttcttattta-tcttccttctttctatcatctctccttttatc 268 Query: 581 cacatccctttagttttgcttcacaacctanaatcc 616 ||||||||||| ||||| |||||||||||| ||||| Sbjct: 267 cacatcccttttgttttacttcacaacctagaatcc 232 Score = 42.1 bits (21), Expect = 2.2 Identities = 43/49 (87%), Gaps = 1/49 (2%) Strand = Plus / Minus Query: 12 tagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 ||||||||||| || ||||||| | |||||||||| |||||||||||| Sbjct: 836 tagaatatatctag-atgtgtgcgtttatttatctatattctatattta 789
>gb|AY847106.1| Zeugites capillaris ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1062 Score = 394 bits (199), Expect = e-106 Identities = 354/406 (87%), Gaps = 9/406 (2%) Strand = Plus / Minus Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 623 ggtttgttccgccatcccacccaatgaagtattaggatttttttcaataaaatcctatcc 564 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | ||||||||| |||||||||||| |||||||||| |||||||||| ||||||| |||| Sbjct: 563 agtcataggttttgtcgttcccacagcttctcctttaatggttaggcttgaatcctgcaa 504 Query: 338 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 397 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || Sbjct: 503 tggagcttccaaaaaatttctttccgagtcaattttctcagttttattaacccgggctgc 444 Query: 398 tctttattattgcttaaaatttgtagttcttctttcaagttacaatttttcattctctat 457 ||||| ||||||||| ||||| || || || |||||||| || |||| ||||||| | Sbjct: 443 tcttttttattgcttgcaatttttatttattgtttcaagtgacgatttcgaattctctct 384 Query: 458 tagttttattat--------attgatgctttttcacattgccttttatgatgtaattcat 509 | |||| |||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 383 tttttttcttattttattatattgatgctttatcacattgccttttatgatgtaattcat 324 Query: 510 agaccatacacagnggaattctatatcttatttatttcctcttccttctttctatcatcc 569 |||||||||||| ||||| ||||||||| ||| ||| | |||||||| ||||||||| Sbjct: 323 agaccatacacattggaatcctatatctttctta-ttctttttccttctacctatcatcc 265 Query: 570 ctccctttatccacatccctttagttttgcttcacaacctanaatc 615 |||| |||||||||||||||||||||||| ||||||||||| |||| Sbjct: 264 ctccttttatccacatccctttagttttgtttcacaacctagaatc 219 Score = 101 bits (51), Expect = 3e-18 Identities = 60/63 (95%) Strand = Plus / Minus Query: 143 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaa 202 ||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 696 atttcgcgggcgaatgtttactctttcctgtcttatttggtaatttataaccttaccaaa 637 Query: 203 taa 205 ||| Sbjct: 636 taa 634
>gb|AY847082.1| Andropogon gerardii ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1186 Score = 392 bits (198), Expect = e-106 Identities = 316/355 (89%), Gaps = 2/355 (0%) Strand = Plus / Minus Query: 91 tccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcg 150 ||||| |||||| ||||||||||||| | |||||||||||||| ||||||| |||||||| Sbjct: 754 tccttttttttattcttattgaatcgtg-taaagtattctaatccaataaggatttcgcg 696 Query: 151 ggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaa 210 ||||||||||||||||||||||||||||||||||||||| || |||| ||||||| ||| Sbjct: 695 ggcgaatatttactctttcctgtcttatttgttaatttagaaccttatcaaataaagcaa 636 Query: 211 nnnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaat 270 ||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 635 tttttttggtttgttccgccatcccacccaatgaagtgttaggattctttccaataaaat 576 Query: 271 cctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaat 330 |||||| | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||| Sbjct: 575 cctatgtagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaat 516 Query: 331 cccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaaccc 390 || |||| |||||||||||||||||||||||||||| ||||||||||||||||||||| | Sbjct: 515 cctgcaatggagcttccaaaaaatttctttccgagtcaattttctcagttttattaactc 456 Query: 391 gggcggctctttattattgcttaaaatttgtagttcttctttcaagttacaattt 445 ||| ||||||| ||||||||| | |||| || || || ||||||||||| |||| Sbjct: 455 -ggctgctcttttttattgctttatatttatatttgttgtttcaagttacgattt 402 Score = 125 bits (63), Expect = 2e-25 Identities = 135/158 (85%), Gaps = 5/158 (3%) Strand = Plus / Minus Query: 461 ttttattatattgatgctttttcacattgcc----ttttatgatgtaattcatagaccat 516 |||||||||||||||||||| | |||||||| ||||||||| ||||||||||||||| Sbjct: 377 ttttattatattgatgctttataacattgccctttttttatgatttaattcatagaccat 318 Query: 517 acacagnggaattctatatcttatttatttcctcttccttctttctatcatccctccctt 576 ||||| ||||| ||||||||| | || ||| |||||||| | | ||||||||||| || Sbjct: 317 acacatcggaatcctatatctt-tctaattcttcttccttttataaatcatccctccttt 259 Query: 577 tatccacatccctttagttttgcttcacaacctanaat 614 |||||||||||||||||||||| || ||| |||| ||| Sbjct: 258 tatccacatccctttagttttggtttacagcctagaat 221 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatcca 24 ||||||||||||||||||||||| Sbjct: 820 aaagaagatctagaatatatcca 798
>ref|XM_481019.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2157 Score = 385 bits (194), Expect = e-103 Identities = 253/275 (92%) Strand = Plus / Minus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 276 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 217 Query: 158 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 217 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 216 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 157 Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 156 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 97 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 96 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 37 Query: 338 cggagcttccaaaaaatttctttccgagttaattt 372 |||||||||||||||||||||||||||| ||||| Sbjct: 36 tggagcttccaaaaaatttctttccgagtcaattt 2 Score = 54.0 bits (27), Expect = 6e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 ||||| ||||||||||||||| || |||||| || |||||||||| |||||||||||| Sbjct: 367 aaagaggatctagaatatatctag-atgtgtatgtttatttatctatattctatattta 310
>ref|XM_507181.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0036E18.24 mRNA Length = 2157 Score = 385 bits (194), Expect = e-103 Identities = 253/275 (92%) Strand = Plus / Minus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 276 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 217 Query: 158 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 217 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 216 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 157 Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 156 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 97 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 96 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 37 Query: 338 cggagcttccaaaaaatttctttccgagttaattt 372 |||||||||||||||||||||||||||| ||||| Sbjct: 36 tggagcttccaaaaaatttctttccgagtcaattt 2 Score = 54.0 bits (27), Expect = 6e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 ||||| ||||||||||||||| || |||||| || |||||||||| |||||||||||| Sbjct: 367 aaagaggatctagaatatatctag-atgtgtatgtttatttatctatattctatattta 310
>gb|AY847079.1| Merxmuellera rangei ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1166 Score = 385 bits (194), Expect = e-103 Identities = 293/327 (89%), Gaps = 1/327 (0%) Strand = Plus / Minus Query: 93 cttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcggg 152 ||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||| Sbjct: 736 cttatttttactcttattgaatcatggtaaagtattctaattcaataaagatt-cgcggg 678 Query: 153 cgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaann 212 ||||||||||||||||||||||||||||| ||||||| || |||||||||||| || Sbjct: 677 cgaatatttactctttcctgtcttatttggtaatttagaatcttaccaaataaagtaatt 618 Query: 213 nnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcc 272 |||||||||||||||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 617 tttttggtttgttccgccatcccacccaatgaagtattaggattcttttcaatacaatcc 558 Query: 273 tatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcc 332 |||| | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||||| Sbjct: 557 tatgtagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcc 498 Query: 333 cgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgg 392 |||| |||||||||||||||| ||||||||||| ||||||||||||||||||| ||||| Sbjct: 497 tgcaatggagcttccaaaaaatatctttccgagtcaattttctcagttttattaccccgg 438 Query: 393 gcggctctttattattgcttaaaattt 419 || |||||||||||||| || |||||| Sbjct: 437 gctgctctttattattggtttaaattt 411 Score = 192 bits (97), Expect = 1e-45 Identities = 141/155 (90%), Gaps = 1/155 (0%) Strand = Plus / Minus Query: 461 ttttattatattgatgctttttcacattgccttttatgatgtaattcatagaccatacac 520 |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 372 ttttattatattgatgctttatcacattgccttttatgatgtaattcataaaccatacac 313 Query: 521 agnggaattctatatcttatttatttcctcttccttctttctatcatccctccctttatc 580 | ||||| ||||||||| ||| || |||||||||| |||||||||||||| |||||| Sbjct: 312 attggaatcctatatctttctta-ttattcttccttctatctatcatccctccttttatc 254 Query: 581 cacatccctttagttttgcttcacaacctanaatc 615 ||||||| |||||||||||||||||||||| |||| Sbjct: 253 cacatccttttagttttgcttcacaacctagaatc 219 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatat 21 |||||||||||||||||||| Sbjct: 807 aaagaagatctagaatatat 788
>ref|XM_479424.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2154 Score = 385 bits (194), Expect = e-103 Identities = 253/275 (92%) Strand = Plus / Minus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 276 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 217 Query: 158 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 217 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 216 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 157 Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 156 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 97 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 96 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 37 Query: 338 cggagcttccaaaaaatttctttccgagttaattt 372 |||||||||||||||||||||||||||| ||||| Sbjct: 36 tggagcttccaaaaaatttctttccgagtcaattt 2 Score = 54.0 bits (27), Expect = 6e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 ||||| ||||||||||||||| || |||||| || |||||||||| |||||||||||| Sbjct: 366 aaagaggatctagaatatatctag-atgtgtatgtttatttatctatattctatattta 309
>ref|XM_479423.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2154 Score = 385 bits (194), Expect = e-103 Identities = 253/275 (92%) Strand = Plus / Minus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 276 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 217 Query: 158 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 217 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 216 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 157 Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 156 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 97 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 96 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 37 Query: 338 cggagcttccaaaaaatttctttccgagttaattt 372 |||||||||||||||||||||||||||| ||||| Sbjct: 36 tggagcttccaaaaaatttctttccgagtcaattt 2 Score = 54.0 bits (27), Expect = 6e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 ||||| ||||||||||||||| || |||||| || |||||||||| |||||||||||| Sbjct: 366 aaagaggatctagaatatatctag-atgtgtatgtttatttatctatattctatattta 309
>dbj|AK105308.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-B12, full insert sequence Length = 2166 Score = 385 bits (194), Expect = e-103 Identities = 253/275 (92%) Strand = Plus / Minus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 276 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 217 Query: 158 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 217 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 216 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 157 Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 156 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 97 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 96 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 37 Query: 338 cggagcttccaaaaaatttctttccgagttaattt 372 |||||||||||||||||||||||||||| ||||| Sbjct: 36 tggagcttccaaaaaatttctttccgagtcaattt 2 Score = 54.0 bits (27), Expect = 6e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 ||||| ||||||||||||||| || |||||| || |||||||||| |||||||||||| Sbjct: 376 aaagaggatctagaatatatctag-atgtgtatgtttatttatctatattctatattta 319
>gb|AY847087.1| Danthoniopsis petiolata ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1147 Score = 383 bits (193), Expect = e-103 Identities = 289/322 (89%), Gaps = 1/322 (0%) Strand = Plus / Minus Query: 91 tccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcg 150 |||||||||||| ||||||||||||| | |||||||||||||| |||||| |||||||| Sbjct: 732 tccttatttttattcttattgaatcgtg-taaagtattctaatccaataaagatttcgcg 674 Query: 151 ggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaa 210 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct: 673 ggcgaatatttactctttcctgtcttatttgttaatttataaccttaccaaataaagcaa 614 Query: 211 nnnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaat 270 |||||||||||||||||||||||||||||| ||||||||||||| | |||||| Sbjct: 613 tttttttggtttgttccgccatcccacccaatgaagtattaggattctttttactaaaat 554 Query: 271 cctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaat 330 |||||| | ||||||||| |||||||||||| ||||||| || ||||||||||| ||||| Sbjct: 553 cctatgcagtcataggttttgtcgttcccacagcttctcttttaatggttaggtttgaat 494 Query: 331 cccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaaccc 390 || |||| |||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 493 cctgcaatggagcttccaaaaaatttctttccgagtcaattttctcagttttatcaaccg 434 Query: 391 gggcggctctttattattgctt 412 |||| ||||||| ||||||||| Sbjct: 433 gggctgctcttttttattgctt 412 Score = 155 bits (78), Expect = 2e-34 Identities = 139/156 (89%), Gaps = 3/156 (1%) Strand = Plus / Minus Query: 461 ttttattatattgatgctttttcacattgccttttatgatgtaattcatagaccatacac 520 |||||||||||||||||||| ||||||||||||| |||| || |||| |||||||||||| Sbjct: 368 ttttattatattgatgctttatcacattgccttt-atga-gttattcctagaccatacac 311 Query: 521 agnggaattctatatcttatttatttcctcttccttctttctatcatccctccctttatc 580 | ||||| ||||||||| ||||| | |||||||||| |||||||||||||| |||||| Sbjct: 310 attggaatcctatatctttcttatt-cttcttccttctatctatcatccctccttttatc 252 Query: 581 cacatccctttagttttgcttcacaacctanaatcc 616 ||||||||||||||||||||| |||| ||| ||||| Sbjct: 251 cacatccctttagttttgctttacaagctagaatcc 216 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatat 21 |||||||||||||||||||| Sbjct: 796 aaagaagatctagaatatat 777
>gb|AY847114.1| Spartochloa scirpoidea ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1176 Score = 377 bits (190), Expect = e-101 Identities = 309/350 (88%), Gaps = 2/350 (0%) Strand = Plus / Minus Query: 91 tccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcg 150 |||||||||||| ||||||||||||| | ||||||||||||| ||||||| ||||||| Sbjct: 754 tccttatttttattcttattgaatcgtg--aaagtattctaatccaataagggtttcgcg 697 Query: 151 ggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaa 210 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct: 696 ggcgaatatttactctttcctgtcttatttgttaatttataaccttaccaaataaagcaa 637 Query: 211 nnnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaat 270 |||||||||||||||||||||||||||||| |||||||||||||||| ||||| Sbjct: 636 tttttttggtttgttccgccatcccacccaatgaagtattaggattcttttcaagaaaat 577 Query: 271 cctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaat 330 |||||| | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||| Sbjct: 576 cctatgcagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaat 517 Query: 331 cccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaaccc 390 || |||| |||||||| ||||||| ||||||||| ||||||||||||||||||||||| Sbjct: 516 cctgcaatggagcttctaaaaaatggatttccgagtcaattttctcagttttattaaccc 457 Query: 391 gggcggctctttattattgcttaaaatttgtagttcttctttcaagttac 440 ||| ||||||| ||||||||| |||||| || || || ||| ||||||| Sbjct: 456 cggctgctcttttttattgctttaaatttttatttattgtttgaagttac 407 Score = 190 bits (96), Expect = 4e-45 Identities = 134/146 (91%), Gaps = 1/146 (0%) Strand = Plus / Minus Query: 470 attgatgctttttcacattgccttttatgatgtaattcatagaccatacacagnggaatt 529 ||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 368 attgatgctttatcacattgccttttatgatgtaattcatagcccatacacattggaatc 309 Query: 530 ctatatcttatttatttcctcttccttctttctatcatccctccctttatccacatccct 589 ||||||||| ||||| | |||||||||| |||||||||||||| ||||||||||||||| Sbjct: 308 ctatatctttcttatt-cttcttccttctatctatcatccctccttttatccacatccct 250 Query: 590 ttagttttgcttcacaacctanaatc 615 ||||||||||||||||||||| |||| Sbjct: 249 ttagttttgcttcacaacctagaatc 224 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatcca 24 ||||||||||||||||||||||| Sbjct: 818 aaagaagatctagaatatatcca 796
>gb|AY847112.1| Cyperochloa hirsuta ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 931 Score = 377 bits (190), Expect = e-101 Identities = 313/355 (88%), Gaps = 1/355 (0%) Strand = Plus / Minus Query: 91 tccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcg 150 |||||||||||| ||||||||||||| | ||||||||| |||| |||||| |||||||| Sbjct: 509 tccttatttttattcttattgaatcgtg-taaagtattttaatccaataaagatttcgcg 451 Query: 151 ggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaa 210 ||||||||||||||||||||||| |||||||||||||||||| |||||||||||| | | Sbjct: 450 ggcgaatatttactctttcctgttttatttgttaatttataaccttaccaaataaagcca 391 Query: 211 nnnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaat 270 |||||||||||||||||||||||||||||| |||||||||||||||| ||||| Sbjct: 390 tttttttggtttgttccgccatcccacccaatgaagtattaggattcttttcaagaaaat 331 Query: 271 cctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaat 330 |||||| | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||| Sbjct: 330 cctatgcagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaat 271 Query: 331 cccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaaccc 390 || |||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||| Sbjct: 270 cctgcaatggagcttccaaaaaatttatttccgagtcaattttctcagttttattaaccc 211 Query: 391 gggcggctctttattattgcttaaaatttgtagttcttctttcaagttacaattt 445 ||| ||||||| || |||||| |||||| || || || ||| ||||||| |||| Sbjct: 210 cggctgctcttttttgttgctttaaatttttatttattgtttgaagttacgattt 156 Score = 151 bits (76), Expect = 3e-33 Identities = 115/127 (90%), Gaps = 1/127 (0%) Strand = Plus / Minus Query: 465 attatattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagng 524 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 127 attatattgatgctttatcacattgccttttatgatgtaattcatagaccatacacattg 68 Query: 525 gaattctatatcttatttatttcctcttccttctttctatcatccctccctttatccaca 584 |||| ||||||||| ||| | | ||||||||| |||||||||||||| |||||||||| Sbjct: 67 gaatcctatatctttctta-tccttcttccttcaatctatcatccctccttttatccaca 9 Query: 585 tcccttt 591 ||||||| Sbjct: 8 tcccttt 2
>gb|AY912197.1| Neurolepis nana ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1230 Score = 377 bits (190), Expect = e-101 Identities = 264/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 143 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 197 |||||||||||||||||||||||||| |||||||||||||||||||||| | |||| Sbjct: 726 atttcgcgggcgaatatttactcttttctgtcttatttgttaatttatattataacctta 667 Query: 198 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 257 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 666 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 607 Query: 258 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 317 ||||||||||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 606 ttttcaataaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 547 Query: 318 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 377 ||||||||||||| || ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 546 gttaggtctgaattccacaatggagcttccaaaaaatttctttccgagtcaattttctca 487 Query: 378 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 428 ||||||||||||||||| ||||||||||||||||| ||||||||| ||||| Sbjct: 486 gttttattaacccgggccgctctttattattgcttcaaatttgtatttctt 436 Score = 210 bits (106), Expect = 4e-51 Identities = 148/161 (91%), Gaps = 1/161 (0%) Strand = Plus / Minus Query: 449 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 508 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 426 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 367 Query: 509 tagaccatacacagnggaattctatatcttatttatttcctcttccttctttctatcatc 568 ||||||||||| | ||||| ||||||||| ||| ||||||||| |||||||||||||| Sbjct: 366 tagaccatacatattggaatcctatatctttctta-ttcctcttctttctttctatcatc 308 Query: 569 cctccctttatccacatccctttagttttgcttcacaacct 609 ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 307 cctccttttatccacatccctttagttttgcttcacaacct 267 Score = 81.8 bits (41), Expect = 3e-12 Identities = 100/117 (85%), Gaps = 7/117 (5%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||| ||||| ||||||||| ||| ||||||||| Sbjct: 843 aaagaagatctagaatatatctag-atgcgtgtgtctatttatctgtattatatatttat 785 Query: 62 agataataatgtagtccttctaaaaaata---tccttatttttactcttattgaatc 115 ||||||| ||| || |||||||||| | ||||||||||||||||||||||||| Sbjct: 784 agataat---gtaatctttctaaaaaaaaatctccttatttttactcttattgaatc 731
>gb|AY912194.1| Chusquea bambusoides ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1174 Score = 377 bits (190), Expect = e-101 Identities = 264/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 143 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 197 ||||||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct: 687 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttatattataacctta 628 Query: 198 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 257 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 627 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 568 Query: 258 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 317 |||||||||| |||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 567 ttttcaataagatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 508 Query: 318 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 377 |||||||||||||||| ||| ||||||| |||||||||||||||||||| |||||||||| Sbjct: 507 gttaggtctgaatcccacaatggagcttacaaaaaatttctttccgagtcaattttctca 448 Query: 378 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 428 ||||||||||||||||| ||||||||||||||||| ||||||||| ||||| Sbjct: 447 gttttattaacccgggccgctctttattattgcttcaaatttgtatttctt 397 Score = 216 bits (109), Expect = 7e-53 Identities = 153/167 (91%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 449 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 508 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 387 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 328 Query: 509 tagaccatacacagnggaattctatatcttatttatttcctcttccttctttctatcatc 568 ||||||||||| | ||||| ||||||||| ||||| ||||||| |||||||||||||| Sbjct: 327 tagaccatacatattggaatcctatatctttcttatt-cctcttctttctttctatcatc 269 Query: 569 cctccctttatccacatccctttagttttgcttcacaacctanaatc 615 ||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 268 cctccttttatccacatccctttagttttgcttcacaacctagaatc 222 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 83 aaaaaatatccttatttttactcttattgaatc 115 |||| |||||||||||||||||||||||||||| Sbjct: 724 aaaatatatccttatttttactcttattgaatc 692 Score = 54.0 bits (27), Expect = 6e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 ||||||||||||||||||||| || ||||||||| ||||||||| ||| |||||||| Sbjct: 801 aaagaagatctagaatatatctag-atgtgtgtgtctatttatctgtattatatattta 744
>gb|U62786.1|COU62786 Chusquea oxylepis ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1032 Score = 377 bits (190), Expect = e-101 Identities = 264/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 143 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 197 ||||||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct: 696 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttatattataacctta 637 Query: 198 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 257 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 636 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 577 Query: 258 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 317 |||||||||| |||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 576 ttttcaataagatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 517 Query: 318 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 377 |||||||||||||||| ||| ||||||| |||||||||||||||||||| |||||||||| Sbjct: 516 gttaggtctgaatcccacaatggagcttacaaaaaatttctttccgagtcaattttctca 457 Query: 378 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 428 ||||||||||||||||| ||||||||||||||||| ||||||||| ||||| Sbjct: 456 gttttattaacccgggccgctctttattattgcttcaaatttgtatttctt 406 Score = 216 bits (109), Expect = 7e-53 Identities = 153/167 (91%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 449 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 508 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 396 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 337 Query: 509 tagaccatacacagnggaattctatatcttatttatttcctcttccttctttctatcatc 568 ||||||||||| | ||||| ||||||||| ||||| ||||||| |||||||||||||| Sbjct: 336 tagaccatacatattggaatactatatctttcttatt-cctcttctttctttctatcatc 278 Query: 569 cctccctttatccacatccctttagttttgcttcacaacctanaatc 615 ||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 277 cctccttttatccacatccctttagttttgcttcacaacctagaatc 231 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Minus Query: 83 aaaaaatatccttatttttactcttattgaatc 115 ||||||||||||||||||||||||||||||||| Sbjct: 733 aaaaaatatccttatttttactcttattgaatc 701 Score = 54.0 bits (27), Expect = 6e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 ||||||||||||||||||||| || ||||||||| ||||||||| ||| |||||||| Sbjct: 810 aaagaagatctagaatatatctag-atgtgtgtgtctatttatctgtattatatattta 753
>gb|U62780.1|CAU62780 Chusquea aff. fendleri ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1031 Score = 377 bits (190), Expect = e-101 Identities = 264/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 143 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 197 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 694 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 635 Query: 198 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 257 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 634 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 575 Query: 258 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 317 ||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 574 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 515 Query: 318 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 377 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 514 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtaaattttctca 455 Query: 378 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 428 ||||||||||||||||| ||||||||||||||||| ||||||||| ||||| Sbjct: 454 gttttattaacccgggccgctctttattattgcttcaaatttgtatttctt 404 Score = 208 bits (105), Expect = 2e-50 Identities = 152/167 (91%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 449 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 508 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 394 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 335 Query: 509 tagaccatacacagnggaattctatatcttatttatttcctcttccttctttctatcatc 568 ||||||||||| | ||||| ||||||||| ||| ||||||||| |||||||||||||| Sbjct: 334 tagaccatacatattggaatcctatatctttctta-ttcctcttctttctttctatcatc 276 Query: 569 cctccctttatccacatccctttagttttgcttcacaacctanaatc 615 || || |||||||||||||||||||||||||||||||||||| |||| Sbjct: 275 cccccttttatccacatccctttagttttgcttcacaacctagaatc 229 Score = 89.7 bits (45), Expect = 1e-14 Identities = 101/117 (86%), Gaps = 7/117 (5%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||| ||| ||||||||| Sbjct: 811 aaagaagatctagaatatatctag-atgtgtgtgtctatttatccgtattatatatttat 753 Query: 62 agataataatgtagtccttct---aaaaaatatccttatttttactcttattgaatc 115 ||||||| ||| || |||| ||||||||||||||||||||||||||||||||| Sbjct: 752 agataat---gtaatctttcttaaaaaaaatatccttatttttactcttattgaatc 699
>gb|AY847093.1| Thysanolaena latifolia ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1182 Score = 373 bits (188), Expect = e-100 Identities = 319/364 (87%), Gaps = 2/364 (0%) Strand = Plus / Minus Query: 92 ccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgg 151 ||||||||||| ||||||||||||| | |||||||| |||| |||||| ||||||||| Sbjct: 755 ccttatttttattcttattgaatcgtg--aaagtattataatccaataaagatttcgcgg 698 Query: 152 gcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaan 211 | ||| ||||||||||||||||| ||||||||||||||||| |||||||||||| ||| Sbjct: 697 gggaaaatttactctttcctgtcatatttgttaatttataaccttaccaaataaagcaat 638 Query: 212 nnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatc 271 ||||||||||||||||||| |||||||||| ||||||||||||||||||||||| Sbjct: 637 ttttttggtttgttccgccatcccaaccaatgaagtattaggattcttttcaataaaatc 578 Query: 272 ctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatc 331 ||||| | ||||||||| |||||||||||| |||||||||| ||||||||||| |||||| Sbjct: 577 ctatgcagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatc 518 Query: 332 ccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccg 391 | |||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||| Sbjct: 517 ctgcaatggagcttccaaaaaatttatttccgagtcaattttctcagttttattaacccg 458 Query: 392 ggcggctctttattattgcttaaaatttgtagttcttctttcaagttacaatttttcatt 451 ||| ||||||| ||||||||| ||||| || || || ||| ||||||| ||||| ||| Sbjct: 457 ggctgctcttttttattgctttcaatttttatttattgtttgaagttacgattttgaatt 398 Query: 452 ctct 455 |||| Sbjct: 397 ctct 394 Score = 212 bits (107), Expect = 1e-51 Identities = 145/157 (92%), Gaps = 1/157 (0%) Strand = Plus / Minus Query: 460 gttttattatattgatgctttttcacattgccttttatgatgtaattcatagaccataca 519 |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 380 gtttaattatattgatgctttatcacattgccttttatgatgtaattcatagaccataca 321 Query: 520 cagnggaattctatatcttatttatttcctcttccttctttctatcatccctccctttat 579 || ||||| ||||||||| ||| ||| |||||||||| |||||||||||||| ||||| Sbjct: 320 cattggaatcctatatctttctta-ttcttcttccttctatctatcatccctccttttat 262 Query: 580 ccacatccctttagttttgcttcacaacctanaatcc 616 ||||||||||||||||||||||||||||||| ||||| Sbjct: 261 ccacatccctttagttttgcttcacaacctagaatcc 225 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatcca 24 ||||||||||||||||||||||| Sbjct: 826 aaagaagatctagaatatatcca 804
>gb|AY912195.1| Chusquea culeou ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1181 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 143 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 197 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 692 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 633 Query: 198 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 257 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 632 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 573 Query: 258 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 317 ||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 572 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 513 Query: 318 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 377 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 512 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtaaattttctca 453 Query: 378 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 428 ||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 452 gttttattaacccgggccgctctttattattgcttcaaatttttatttctt 402 Score = 216 bits (109), Expect = 7e-53 Identities = 153/167 (91%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 449 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 508 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 392 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 333 Query: 509 tagaccatacacagnggaattctatatcttatttatttcctcttccttctttctatcatc 568 ||||||||||| | ||||| ||||||||| ||||| ||||||| |||||||||||||| Sbjct: 332 tagaccatacatattggaatcctatatctttcttatt-cctcttctttctttctatcatc 274 Query: 569 cctccctttatccacatccctttagttttgcttcacaacctanaatc 615 ||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 273 cctccttttatccacatccctttagttttgcttcacaacctagaatc 227 Score = 85.7 bits (43), Expect = 2e-13 Identities = 101/118 (85%), Gaps = 8/118 (6%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||| ||| ||||||||| Sbjct: 810 aaagaagatctagaatatatctag-atgtgtgtgtctatttatccgtattatatatttat 752 Query: 62 agataataatgtagtccttct----aaaaaatatccttatttttactcttattgaatc 115 ||||||| ||| || |||| ||||||||||||||||||||||||||||||||| Sbjct: 751 agataat---gtaatctttcttaaaaaaaaatatccttatttttactcttattgaatc 697
>gb|AF133472.1|AF133472 Chusquea ramosissima ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1193 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 143 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 197 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 718 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 659 Query: 198 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 257 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 658 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 599 Query: 258 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 317 ||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 598 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 539 Query: 318 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 377 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 538 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtaaattttctca 479 Query: 378 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 428 ||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 478 gttttattaacccgggccgctctttattattgcttcaaatttttatttctt 428 Score = 216 bits (109), Expect = 7e-53 Identities = 153/167 (91%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 449 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 508 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 418 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 359 Query: 509 tagaccatacacagnggaattctatatcttatttatttcctcttccttctttctatcatc 568 ||||||||||| | ||||| ||||||||| ||||| ||||||| |||||||||||||| Sbjct: 358 tagaccatacatattggaatcctatatctttcttatt-cctcttctttctttctatcatc 300 Query: 569 cctccctttatccacatccctttagttttgcttcacaacctanaatc 615 ||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 299 cctccttttatccacatccctttagttttgcttcacaacctagaatc 253 Score = 71.9 bits (36), Expect = 2e-09 Identities = 99/118 (83%), Gaps = 8/118 (6%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||| ||| ||||||||| Sbjct: 836 aaagaagatctagaatatatctag-atgtgtgtgtctatttatccgtattatatatttat 778 Query: 62 agataataatgtagtccttct----aaaaaatatccttatttttactcttattgaatc 115 || |||||||| || |||| ||||||| |||||| |||||||||||||||||| Sbjct: 777 ag---ataatgtaatctttcttaaaaaaaaatctccttanttttactcttattgaatc 723
>gb|U62793.1|NAU62793 Neurolepis aperta ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1052 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 143 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 197 ||||||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct: 695 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttatattataacctta 636 Query: 198 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 257 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 635 ccaaataaggcaattcttttggtttgttccgccatcccacccaatgaagtattaggattc 576 Query: 258 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 317 ||||||||||||||||||| | ||||||||||||||||||||||| |||||| || |||| Sbjct: 575 ttttcaataaaatcctatgcagtcataggttctgtcgttcccactacttctcgtttaatg 516 Query: 318 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 377 ||||||||||||| || ||| ||||||||||||||| |||||||| ||| |||||||||| Sbjct: 515 gttaggtctgaattccacaatggagcttccaaaaaaattctttccaagtcaattttctca 456 Query: 378 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 428 ||||||||||||||||| ||||||||||||||||||||||||||| ||||| Sbjct: 455 gttttattaacccgggccgctctttattattgcttaaaatttgtatttctt 405 Score = 210 bits (106), Expect = 4e-51 Identities = 153/168 (91%), Gaps = 1/168 (0%) Strand = Plus / Minus Query: 449 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 508 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 395 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 336 Query: 509 tagaccatacacagnggaattctatatcttatttatttcctcttccttctttctatcatc 568 ||||||||||| | ||||| ||||||||| ||| ||||||||| || ||||||||||| Sbjct: 335 tagaccatacatataggaatcctatatctttctta-ttcctcttctttttttctatcatc 277 Query: 569 cctccctttatccacatccctttagttttgcttcacaacctanaatcc 616 ||||| |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 276 cctccttttatccacatccctttagttttgcttcacaacctagaatcc 229 Score = 69.9 bits (35), Expect = 1e-08 Identities = 60/67 (89%), Gaps = 1/67 (1%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||| ||||||||| || ||||||||| ||||| |||| ||||||||||||| Sbjct: 832 aaagaagatctggaatatatctag-atgtgtgtgtctatttttctatattctatatttat 774 Query: 62 agataat 68 ||||||| Sbjct: 773 agataat 767 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 91 tccttatttttactcttattgaatc 115 ||||||||||||||||||||||||| Sbjct: 737 tccttatttttactcttattgaatc 713
>gb|U62789.1|CTU62789 Chusquea talamancensis ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1031 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 143 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 197 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 694 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 635 Query: 198 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 257 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 634 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 575 Query: 258 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 317 ||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 574 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 515 Query: 318 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 377 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 514 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtaaattttctca 455 Query: 378 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 428 ||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 454 gttttattaacccgggccgctctttattattgcttcaaatttttatttctt 404 Score = 216 bits (109), Expect = 7e-53 Identities = 153/167 (91%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 449 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 508 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 394 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 335 Query: 509 tagaccatacacagnggaattctatatcttatttatttcctcttccttctttctatcatc 568 ||||||||||| | ||||| ||||||||| ||||| ||||||| |||||||||||||| Sbjct: 334 tagaccatacatattggaatcctatatctttcttatt-cctcttctttctttctatcatc 276 Query: 569 cctccctttatccacatccctttagttttgcttcacaacctanaatc 615 ||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 275 cctccttttatccacatccctttagttttgcttcacaacctagaatc 229 Score = 89.7 bits (45), Expect = 1e-14 Identities = 101/117 (86%), Gaps = 7/117 (5%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||| ||| ||||||||| Sbjct: 811 aaagaagatctagaatatatctag-atgtgtgtgtctatttatccgtattatatatttat 753 Query: 62 agataataatgtagtccttct---aaaaaatatccttatttttactcttattgaatc 115 ||||||| ||| || |||| ||||||||||||||||||||||||||||||||| Sbjct: 752 agataat---gtaatctttcttaaaaaaaatatccttatttttactcttattgaatc 699
>gb|U62788.1|CSU62788 Chusquea spencei ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1031 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 143 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 197 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 694 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 635 Query: 198 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 257 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 634 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 575 Query: 258 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 317 ||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 574 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 515 Query: 318 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 377 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 514 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtaaattttctca 455 Query: 378 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 428 ||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 454 gttttattaacccgggccgctctttattattgcttcaaatttttatttctt 404 Score = 216 bits (109), Expect = 7e-53 Identities = 153/167 (91%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 449 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 508 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 394 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 335 Query: 509 tagaccatacacagnggaattctatatcttatttatttcctcttccttctttctatcatc 568 ||||||||||| | ||||| ||||||||| ||||| ||||||| |||||||||||||| Sbjct: 334 tagaccatacatattggaatcctatatctttcttatt-cctcttctttctttctatcatc 276 Query: 569 cctccctttatccacatccctttagttttgcttcacaacctanaatc 615 ||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 275 cctccttttatccacatccctttagttttgcttcacaacctagaatc 229 Score = 89.7 bits (45), Expect = 1e-14 Identities = 101/117 (86%), Gaps = 7/117 (5%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||| ||| ||||||||| Sbjct: 811 aaagaagatctagaatatatctag-atgtgtgtgtctatttatccgtattatatatttat 753 Query: 62 agataataatgtagtccttct---aaaaaatatccttatttttactcttattgaatc 115 ||||||| ||| || |||| ||||||||||||||||||||||||||||||||| Sbjct: 752 agataat---gtaatctttcttaaaaaaaatatccttatttttactcttattgaatc 699
>gb|U62787.1|CSU62787 Chusquea sp. A ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1031 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 143 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 197 ||||||||||||||||||||||||||||| ||||||||||||||||||| | |||| Sbjct: 697 atttcgcgggcgaatatttactctttcctatcttatttgttaatttatattataacctta 638 Query: 198 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 257 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 637 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 578 Query: 258 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 317 |||||||||| |||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 577 ttttcaataagatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 518 Query: 318 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 377 |||||||||||||||| ||| ||||||| |||||||||||||||||||| |||||||||| Sbjct: 517 gttaggtctgaatcccacaatggagctttcaaaaaatttctttccgagtcaattttctca 458 Query: 378 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 428 ||||||||||||||||| ||||||||||||||||| ||||||||| ||||| Sbjct: 457 gttttattaacccgggccgctctttattattgcttcaaatttgtatttctt 407 Score = 208 bits (105), Expect = 2e-50 Identities = 152/167 (91%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 449 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 508 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 397 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 338 Query: 509 tagaccatacacagnggaattctatatcttatttatttcctcttccttctttctatcatc 568 ||||||||||| | ||||| | ||||||| ||||| ||||||| |||||||||||||| Sbjct: 337 tagaccatacatattggaatcccatatctttcttatt-cctcttctttctttctatcatc 279 Query: 569 cctccctttatccacatccctttagttttgcttcacaacctanaatc 615 ||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 278 cctccttttatccacatccctttagttttgcttcacaacctagaatc 232 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Minus Query: 83 aaaaaatatccttatttttactcttattgaatc 115 ||||||||||||||||||||||||||||||||| Sbjct: 734 aaaaaatatccttatttttactcttattgaatc 702 Score = 54.0 bits (27), Expect = 6e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 ||||||||||||||||||||| || ||||||||| ||||||||| ||| |||||||| Sbjct: 809 aaagaagatctagaatatatctag-atgtgtgtgtctatttatctgtattatatattta 752
>gb|U62785.1|COU62785 Chusquea oligophylla ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1032 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 143 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 197 |||||||||||| |||||||||||||||||||||||||||||||||||| | |||| Sbjct: 696 atttcgcgggcggatatttactctttcctgtcttatttgttaatttatattataacctta 637 Query: 198 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 257 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 636 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 577 Query: 258 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 317 ||||||||||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 576 ttttcaataaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 517 Query: 318 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 377 |||||||||||||||| ||| ||||||| |||||||||||||||||||| |||||||||| Sbjct: 516 gttaggtctgaatcccacaatggagcttacaaaaaatttctttccgagtcaattttctca 457 Query: 378 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 428 ||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 456 gttttattaacccgggccgctctttattattgcttcaaatttctatttctt 406 Score = 208 bits (105), Expect = 2e-50 Identities = 152/167 (91%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 449 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 508 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 396 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 337 Query: 509 tagaccatacacagnggaattctatatcttatttatttcctcttccttctttctatcatc 568 ||||||||||| | ||||| | ||||||| ||||| ||||||| |||||||||||||| Sbjct: 336 tagaccatacatattggaatcccatatctttcttatt-cctcttctttctttctatcatc 278 Query: 569 cctccctttatccacatccctttagttttgcttcacaacctanaatc 615 ||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 277 cctccttttatccacatccctttagttttgcttcacaacctagaatc 231 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Minus Query: 83 aaaaaatatccttatttttactcttattgaatc 115 ||||||||||||||||||||||||||||||||| Sbjct: 733 aaaaaatatccttatttttactcttattgaatc 701 Score = 54.0 bits (27), Expect = 6e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 ||||||||||||||||||||| || ||||||||| ||||||||| ||| |||||||| Sbjct: 809 aaagaagatctagaatatatctag-atgtgtgtgtctatttatctgtattatatattta 752
>gb|U62784.1|CEU62784 Chusquea exasperata ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1032 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 143 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 197 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 694 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 635 Query: 198 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 257 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 634 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 575 Query: 258 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 317 ||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 574 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 515 Query: 318 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 377 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 514 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtcaattttctca 455 Query: 378 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 428 ||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 454 gttttattaacccgggccgctctttattattgcttcaaatttttatttctt 404 Score = 216 bits (109), Expect = 7e-53 Identities = 153/167 (91%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 449 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 508 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 394 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 335 Query: 509 tagaccatacacagnggaattctatatcttatttatttcctcttccttctttctatcatc 568 ||||||||||| | ||||| ||||||||| ||||| ||||||| |||||||||||||| Sbjct: 334 tagaccatacatattggaatcctatatctttcttatt-cctcttctttctttctatcatc 276 Query: 569 cctccctttatccacatccctttagttttgcttcacaacctanaatc 615 ||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 275 cctccttttatccacatccctttagttttgcttcacaacctagaatc 229 Score = 77.8 bits (39), Expect = 4e-11 Identities = 100/118 (84%), Gaps = 8/118 (6%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||| ||| ||||||||| Sbjct: 812 aaagaagatctagaatatatctag-atgtgtgtgtctatttatccgtattatatatttat 754 Query: 62 agataataatgtagtccttct----aaaaaatatccttatttttactcttattgaatc 115 || |||||||| || |||| ||||||| ||||||||||||||||||||||||| Sbjct: 753 ag---ataatgtaatctttcttaaaaaaaaatctccttatttttactcttattgaatc 699
>gb|U54752.1|CTU54752 Chusquea tessellata ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1031 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 143 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 197 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 694 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 635 Query: 198 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 257 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 634 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 575 Query: 258 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 317 ||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 574 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 515 Query: 318 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 377 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 514 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtaaattttctca 455 Query: 378 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 428 ||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 454 gttttattaacccgggccgctctttattattgcttcaaatttttatttctt 404 Score = 216 bits (109), Expect = 7e-53 Identities = 153/167 (91%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 449 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 508 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 394 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 335 Query: 509 tagaccatacacagnggaattctatatcttatttatttcctcttccttctttctatcatc 568 ||||||||||| | ||||| ||||||||| ||||| ||||||| |||||||||||||| Sbjct: 334 tagaccatacatattggaatcctatatctttcttatt-cctcttctttctttctatcatc 276 Query: 569 cctccctttatccacatccctttagttttgcttcacaacctanaatc 615 ||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 275 cctccttttatccacatccctttagttttgcttcacaacctagaatc 229 Score = 89.7 bits (45), Expect = 1e-14 Identities = 101/117 (86%), Gaps = 7/117 (5%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||| ||| ||||||||| Sbjct: 811 aaagaagatctagaatatatctag-atgtgtgtgtctatttatccgtattatatatttat 753 Query: 62 agataataatgtagtccttct---aaaaaatatccttatttttactcttattgaatc 115 ||||||| ||| || |||| ||||||||||||||||||||||||||||||||| Sbjct: 752 agataat---gtaatctttcttaaaaaaaatatccttatttttactcttattgaatc 699
>gb|U54758.1|CSU54758 Chusquea sp. 'LC et al. 1309' ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1035 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 143 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 197 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 695 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 636 Query: 198 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 257 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 635 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 576 Query: 258 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 317 ||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 575 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 516 Query: 318 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 377 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 515 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtaaattttctca 456 Query: 378 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 428 ||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 455 gttttattaacccgggccgctctttattattgcttcaaatttttatttctt 405 Score = 216 bits (109), Expect = 7e-53 Identities = 153/167 (91%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 449 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 508 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 395 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 336 Query: 509 tagaccatacacagnggaattctatatcttatttatttcctcttccttctttctatcatc 568 ||||||||||| | ||||| ||||||||| ||||| ||||||| |||||||||||||| Sbjct: 335 tagaccatacatattggaatcctatatctttcttatt-cctcttctttctttctatcatc 277 Query: 569 cctccctttatccacatccctttagttttgcttcacaacctanaatc 615 ||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 276 cctccttttatccacatccctttagttttgcttcacaacctagaatc 230 Score = 69.9 bits (35), Expect = 1e-08 Identities = 100/120 (83%), Gaps = 10/120 (8%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||| ||| ||||||||| Sbjct: 815 aaagaagatctagaatatatctag-atgtgtgtgtctatttatccgtattatatatttat 757 Query: 62 agataataatgtagtccttct------aaaaaatatccttatttttactcttattgaatc 115 || |||||||| || |||| ||||||| ||||||||||||||||||||||||| Sbjct: 756 ag---ataatgtaatctttcttaaaaaaaaaaatctccttatttttactcttattgaatc 700
>gb|U54754.1|CSU54754 Chusquea serpens ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1031 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 143 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 197 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 694 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 635 Query: 198 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 257 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 634 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 575 Query: 258 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 317 ||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 574 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 515 Query: 318 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 377 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 514 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtaaattttctca 455 Query: 378 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 428 ||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 454 gttttattaacccgggccgctctttattattgcttcaaatttttatttctt 404 Score = 216 bits (109), Expect = 7e-53 Identities = 153/167 (91%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 449 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 508 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 394 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 335 Query: 509 tagaccatacacagnggaattctatatcttatttatttcctcttccttctttctatcatc 568 ||||||||||| | ||||| ||||||||| ||||| ||||||| |||||||||||||| Sbjct: 334 tagaccatacatattggaatcctatatctttcttatt-cctcttctttctttctatcatc 276 Query: 569 cctccctttatccacatccctttagttttgcttcacaacctanaatc 615 ||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 275 cctccttttatccacatccctttagttttgcttcacaacctagaatc 229 Score = 77.8 bits (39), Expect = 4e-11 Identities = 100/118 (84%), Gaps = 8/118 (6%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||| ||| ||||||||| Sbjct: 812 aaagaagatctagaatatatctag-atgtgtgtgtctatttatccttattatatatttat 754 Query: 62 agataataatgtagtccttct----aaaaaatatccttatttttactcttattgaatc 115 || |||||||| || |||| ||||||| ||||||||||||||||||||||||| Sbjct: 753 ag---ataatgtaatctttcttaaaaaaaaatctccttatttttactcttattgaatc 699
>gb|U54753.1|CSU54753 Chusquea subtessellata ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1031 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 143 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 197 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 694 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 635 Query: 198 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 257 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 634 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 575 Query: 258 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 317 ||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 574 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 515 Query: 318 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 377 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 514 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtaaattttctca 455 Query: 378 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 428 ||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 454 gttttattaacccgggccgctctttattattgcttcaaatttttatttctt 404 Score = 216 bits (109), Expect = 7e-53 Identities = 153/167 (91%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 449 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 508 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 394 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 335 Query: 509 tagaccatacacagnggaattctatatcttatttatttcctcttccttctttctatcatc 568 ||||||||||| | ||||| ||||||||| ||||| ||||||| |||||||||||||| Sbjct: 334 tagaccatacatattggaatcctatatctttcttatt-cctcttctttctttctatcatc 276 Query: 569 cctccctttatccacatccctttagttttgcttcacaacctanaatc 615 ||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 275 cctccttttatccacatccctttagttttgcttcacaacctagaatc 229 Score = 89.7 bits (45), Expect = 1e-14 Identities = 101/117 (86%), Gaps = 7/117 (5%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||| ||| ||||||||| Sbjct: 811 aaagaagatctagaatatatctag-atgtgtgtgtctatttatccgtattatatatttat 753 Query: 62 agataataatgtagtccttct---aaaaaatatccttatttttactcttattgaatc 115 ||||||| ||| || |||| ||||||||||||||||||||||||||||||||| Sbjct: 752 agataat---gtaatctttcttaaaaaaaatatccttatttttactcttattgaatc 699
>gb|U54751.1|CRU54751 Chusquea ramosissima ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1032 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 143 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 197 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 694 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 635 Query: 198 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 257 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 634 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 575 Query: 258 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 317 ||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 574 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 515 Query: 318 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 377 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 514 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtaaattttctca 455 Query: 378 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 428 ||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 454 gttttattaacccgggccgctctttattattgcttcaaatttttatttctt 404 Score = 216 bits (109), Expect = 7e-53 Identities = 153/167 (91%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 449 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 508 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 394 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 335 Query: 509 tagaccatacacagnggaattctatatcttatttatttcctcttccttctttctatcatc 568 ||||||||||| | ||||| ||||||||| ||||| ||||||| |||||||||||||| Sbjct: 334 tagaccatacatattggaatcctatatctttcttatt-cctcttctttctttctatcatc 276 Query: 569 cctccctttatccacatccctttagttttgcttcacaacctanaatc 615 ||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 275 cctccttttatccacatccctttagttttgcttcacaacctagaatc 229 Score = 77.8 bits (39), Expect = 4e-11 Identities = 100/118 (84%), Gaps = 8/118 (6%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||| ||| ||||||||| Sbjct: 812 aaagaagatctagaatatatctag-atgtgtgtgtctatttatccgtattatatatttat 754 Query: 62 agataataatgtagtccttct----aaaaaatatccttatttttactcttattgaatc 115 || |||||||| || |||| ||||||| ||||||||||||||||||||||||| Sbjct: 753 ag---ataatgtaatctttcttaaaaaaaaatctccttatttttactcttattgaatc 699
>gb|U54760.1|CLU54760 Chusquea liebmannii ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1032 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 143 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 197 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 694 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 635 Query: 198 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 257 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 634 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 575 Query: 258 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 317 ||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 574 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 515 Query: 318 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 377 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 514 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtcaattttctca 455 Query: 378 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 428 ||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 454 gttttattaacccgggccgctctttattattgcttcaaatttttatttctt 404 Score = 216 bits (109), Expect = 7e-53 Identities = 153/167 (91%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 449 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 508 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 394 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 335 Query: 509 tagaccatacacagnggaattctatatcttatttatttcctcttccttctttctatcatc 568 ||||||||||| | ||||| ||||||||| ||||| ||||||| |||||||||||||| Sbjct: 334 tagaccatacatattggaatcctatatctttcttatt-cctcttctttctttctatcatc 276 Query: 569 cctccctttatccacatccctttagttttgcttcacaacctanaatc 615 ||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 275 cctccttttatccacatccctttagttttgcttcacaacctagaatc 229 Score = 77.8 bits (39), Expect = 4e-11 Identities = 100/118 (84%), Gaps = 8/118 (6%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||| ||| ||||||||| Sbjct: 812 aaagaagatctagaatatatctag-atgtgtgtgtctatttatccgtattatatatttat 754 Query: 62 agataataatgtagtccttct----aaaaaatatccttatttttactcttattgaatc 115 || |||||||| || |||| ||||||| ||||||||||||||||||||||||| Sbjct: 753 ag---ataatgtaatctttcttaaaaaaaaatctccttatttttactcttattgaatc 699
>gb|U54759.1|CCU54759 Chusquea coronalis ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1031 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 143 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 197 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 693 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 634 Query: 198 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 257 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 633 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 574 Query: 258 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 317 ||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 573 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 514 Query: 318 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 377 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 513 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtcaattttctca 454 Query: 378 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 428 ||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 453 gttttattaacccgggccgctctttattattgcttcaaatttttatttctt 403 Score = 216 bits (109), Expect = 7e-53 Identities = 153/167 (91%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 449 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 508 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 393 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 334 Query: 509 tagaccatacacagnggaattctatatcttatttatttcctcttccttctttctatcatc 568 ||||||||||| | ||||| ||||||||| ||||| ||||||| |||||||||||||| Sbjct: 333 tagaccatacatattggaatcctatatctttcttatt-cctcttctttctttctatcatc 275 Query: 569 cctccctttatccacatccctttagttttgcttcacaacctanaatc 615 ||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 274 cctccttttatccacatccctttagttttgcttcacaacctagaatc 228 Score = 77.8 bits (39), Expect = 4e-11 Identities = 100/118 (84%), Gaps = 8/118 (6%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||| ||| ||||||||| Sbjct: 811 aaagaagatctagaatatatctag-atgtgtgtgtctatttatccgtattatatatttat 753 Query: 62 agataataatgtagtccttct----aaaaaatatccttatttttactcttattgaatc 115 || |||||||| || |||| ||||||| ||||||||||||||||||||||||| Sbjct: 752 ag---ataatgtaatctttcttaaaaaaaaatctccttatttttactcttattgaatc 698
>gb|U54757.1|CBU54757 Chusquea bilimekii ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1033 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 143 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 197 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 695 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 636 Query: 198 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 257 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 635 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 576 Query: 258 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 317 ||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 575 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 516 Query: 318 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 377 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 515 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtaaattttctca 456 Query: 378 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 428 ||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 455 gttttattaacccgggccgctctttattattgcttcaaatttttatttctt 405 Score = 216 bits (109), Expect = 7e-53 Identities = 153/167 (91%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 449 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 508 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 395 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 336 Query: 509 tagaccatacacagnggaattctatatcttatttatttcctcttccttctttctatcatc 568 ||||||||||| | ||||| ||||||||| ||||| ||||||| |||||||||||||| Sbjct: 335 tagaccatacatattggaatcctatatctttcttatt-cctcttctttctttctatcatc 277 Query: 569 cctccctttatccacatccctttagttttgcttcacaacctanaatc 615 ||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 276 cctccttttatccacatccctttagttttgcttcacaacctagaatc 230 Score = 77.8 bits (39), Expect = 4e-11 Identities = 100/118 (84%), Gaps = 8/118 (6%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||| ||| ||||||||| Sbjct: 813 aaagaagatctagaatatatctag-atgtgtgtgtctatttatccgtattatatatttat 755 Query: 62 agataataatgtagtccttct----aaaaaatatccttatttttactcttattgaatc 115 || |||||||| || |||| ||||||| ||||||||||||||||||||||||| Sbjct: 754 ag---ataatgtaatctttcttaaaaaaaaatctccttatttttactcttattgaatc 700
>dbj|AP005675.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1001_G09 Length = 118018 Score = 367 bits (185), Expect = 3e-98 Identities = 352/404 (87%), Gaps = 7/404 (1%) Strand = Plus / Minus Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 76818 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 76759 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | |||||||||||||||||||||| |||||||||| ||||||||||| | |||| | ||| Sbjct: 76758 agtcataggttctgtcgttcccacggcttctcctttaatggttaggttttaatctcacaa 76699 Query: 338 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 397 |||||||||||||||||||||||| ||| || |||||||||||||||||| |||| | Sbjct: 76698 tggagcttccaaaaaatttctttccaagtcaa-tttctcagttttattaactcgggacac 76640 Query: 398 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 453 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 76639 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 76580 Query: 454 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 513 | ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 76579 ttgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 76520 Query: 514 catacacagnggaattctatatcttatttatttcctcttccttctttctatcatccctcc 573 |||||| | ||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 76519 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 76461 Query: 574 ctttatccacat-ccctttagttttgcttcacaacctanaatcc 616 |||||| |||| |||||||||||||||||||||| || ||||| Sbjct: 76460 ttttatctacatcccctttagttttgcttcacaacttagaatcc 76417 Score = 165 bits (83), Expect = 2e-37 Identities = 86/87 (98%) Strand = Plus / Minus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 76925 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 76866 Query: 158 atttactctttcctgtcttatttgtta 184 ||||||||||||||||||||||||||| Sbjct: 76865 atttactctttcctgtcttatttgtta 76839 Score = 54.0 bits (27), Expect = 6e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 ||||| ||||||||||||||| || |||||| || |||||||||| |||||||||||| Sbjct: 77015 aaagaggatctagaatatatctag-atgtgtatgtttatttatctatattctatattta 76958
>gb|U62781.1|CSU62781 Chusquea scandens ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1031 Score = 367 bits (185), Expect = 3e-98 Identities = 256/282 (90%), Gaps = 5/282 (1%) Strand = Plus / Minus Query: 143 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 197 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 694 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 635 Query: 198 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 257 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 634 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 575 Query: 258 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 317 ||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 574 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 515 Query: 318 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 377 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 514 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtaaattttctca 455 Query: 378 gttttattaacccgggcggctctttattattgcttaaaattt 419 ||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 454 gttttattaacccgggccgctctttattattgcttcaaattt 413 Score = 216 bits (109), Expect = 7e-53 Identities = 153/167 (91%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 449 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 508 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 394 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 335 Query: 509 tagaccatacacagnggaattctatatcttatttatttcctcttccttctttctatcatc 568 ||||||||||| | ||||| ||||||||| ||||| ||||||| |||||||||||||| Sbjct: 334 tagaccatacatattggaatcctatatctttcttatt-cctcttctttctttctatcatc 276 Query: 569 cctccctttatccacatccctttagttttgcttcacaacctanaatc 615 ||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 275 cctccttttatccacatccctttagttttgcttcacaacctagaatc 229 Score = 89.7 bits (45), Expect = 1e-14 Identities = 101/117 (86%), Gaps = 7/117 (5%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||| ||| ||||||||| Sbjct: 811 aaagaagatctagaatatatctag-atgtgtgtgtctatttatccgtattatatatttat 753 Query: 62 agataataatgtagtccttct---aaaaaatatccttatttttactcttattgaatc 115 ||||||| ||| || |||| ||||||||||||||||||||||||||||||||| Sbjct: 752 agataat---gtaatctttcttaaaaaaaatatccttatttttactcttattgaatc 699
>gb|AF133483.1|AF133483 Zeugites pittieri ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1107 Score = 363 bits (183), Expect = 5e-97 Identities = 263/292 (90%) Strand = Plus / Minus Query: 128 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 187 |||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 742 tctaatccaataaagatttcgcgggcgaatgtttactctttcctgtcttatttgttaatt 683 Query: 188 tataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagt 247 ||||| |||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 682 tataaccttaccaaataaagcaatttttttggtttgttccgccatcccacccaatgaagt 623 Query: 248 gttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 307 ||||||||||||||||||||||||||| | ||||||||| | |||||||||| ||||| Sbjct: 622 attaggattcttttcaataaaatcctatccagtcataggttttttcgttcccacagcttc 563 Query: 308 tccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagtt 367 ||||| ||||||||||| ||||||| |||| |||||||||||||||||||||||||||| Sbjct: 562 tcctttaatggttaggtttgaatcctgcaatggagcttccaaaaaatttctttccgagtc 503 Query: 368 aattttctcagttttattaacccgggcggctctttattattgcttaaaattt 419 ||||||||||||||||||||||||||| ||||||| ||||||||| |||||| Sbjct: 502 aattttctcagttttattaacccgggctgctcttttttattgcttgaaattt 451 Score = 184 bits (93), Expect = 2e-43 Identities = 140/155 (90%), Gaps = 1/155 (0%) Strand = Plus / Minus Query: 461 ttttattatattgatgctttttcacattgccttttatgatgtaattcatagaccatacac 520 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 400 ttttattatattgatgctttatcacattgccttttatgatgtaattcatagaccatacac 341 Query: 521 agnggaattctatatcttatttatttcctcttccttctttctatcatccctccctttatc 580 | ||||| ||||||||| ||| || | |||||||| ||||||||||||| |||||| Sbjct: 340 attggaatcctatatctttctta-ttatttttccttctacctatcatccctccttttatc 282 Query: 581 cacatccctttagttttgcttcacaacctanaatc 615 |||||||||||||||||| ||||||||||| |||| Sbjct: 281 cacatccctttagttttgtttcacaacctagaatc 247
>gb|U62790.1|CVU62790 Chusquea vulcanalis ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1031 Score = 361 bits (182), Expect = 2e-96 Identities = 262/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 143 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 197 ||||||||||||||| ||||||||||||||||||||| ||||||||||| | |||| Sbjct: 694 atttcgcgggcgaatgtttactctttcctgtcttattggttaatttatattataacctta 635 Query: 198 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 257 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 634 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 575 Query: 258 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 317 ||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 574 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 515 Query: 318 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 377 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 514 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtaaattttctca 455 Query: 378 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 428 ||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 454 gttttattaacccgggccgctctttattattgcttcaaatttttatttctt 404 Score = 216 bits (109), Expect = 7e-53 Identities = 153/167 (91%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 449 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 508 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 394 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 335 Query: 509 tagaccatacacagnggaattctatatcttatttatttcctcttccttctttctatcatc 568 ||||||||||| | ||||| ||||||||| ||||| ||||||| |||||||||||||| Sbjct: 334 tagaccatacatattggaatcctatatctttcttatt-cctcttctttctttctatcatc 276 Query: 569 cctccctttatccacatccctttagttttgcttcacaacctanaatc 615 ||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 275 cctccttttatccacatccctttagttttgcttcacaacctagaatc 229 Score = 89.7 bits (45), Expect = 1e-14 Identities = 101/117 (86%), Gaps = 7/117 (5%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||| ||| ||||||||| Sbjct: 811 aaagaagatctagaatatatctag-atgtgtgtgtctatttatccgtattatatatttat 753 Query: 62 agataataatgtagtccttct---aaaaaatatccttatttttactcttattgaatc 115 ||||||| ||| || |||| ||||||||||||||||||||||||||||||||| Sbjct: 752 agataat---gtaatctttcttaaaaaaaatatccttatttttactcttattgaatc 699
>gb|U62782.1|CTU62782 Chusquea tomentosa ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1030 Score = 361 bits (182), Expect = 2e-96 Identities = 262/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 143 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 197 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 693 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 634 Query: 198 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 257 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 633 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 574 Query: 258 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 317 ||||||| |||| |||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 573 ttttcaaaaaaaccctatgcagtcataggttctgtcgttcccactacttctcctttaatg 514 Query: 318 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 377 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 513 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtaaattttctca 454 Query: 378 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 428 ||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 453 gttttattaacccgggccgctctttattattgcttcaaatttttatttctt 403 Score = 216 bits (109), Expect = 7e-53 Identities = 153/167 (91%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 449 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 508 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 393 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 334 Query: 509 tagaccatacacagnggaattctatatcttatttatttcctcttccttctttctatcatc 568 ||||||||||| | ||||| ||||||||| ||||| ||||||| |||||||||||||| Sbjct: 333 tagaccatacatattggaatcctatatctttcttatt-cctcttctttctttctatcatc 275 Query: 569 cctccctttatccacatccctttagttttgcttcacaacctanaatc 615 ||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 274 cctccttttatccacatccctttagttttgcttcacaacctagaatc 228 Score = 89.7 bits (45), Expect = 1e-14 Identities = 101/117 (86%), Gaps = 7/117 (5%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||| ||| ||||||||| Sbjct: 810 aaagaagatctagaatatatctag-atgtgtgtgtctatttatccgtattatatatttat 752 Query: 62 agataataatgtagtccttct---aaaaaatatccttatttttactcttattgaatc 115 ||||||| ||| || |||| ||||||||||||||||||||||||||||||||| Sbjct: 751 agataat---gtaatctttcttaaaaaaaatatccttatttttactcttattgaatc 698
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 359 bits (181), Expect = 7e-96 Identities = 277/309 (89%), Gaps = 3/309 (0%) Strand = Plus / Plus Query: 97 tttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaa 156 |||||| ||||||||||||| |||||||||||||||| ||||||| |||||||||||||| Sbjct: 80247 tttttattcttattgaatcgtggtaaagtattctaatccaataaggatttcgcgggcgaa 80306 Query: 157 tatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnn 216 ||||||||||||||||||||||||||||||||| || |||| ||||||| ||| Sbjct: 80307 tatttactctttcctgtcttatttgttaatttagaaccttatcaaataaagcaatttttt 80366 Query: 217 nggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatg 276 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 80367 tggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatg 80426 Query: 277 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 336 | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||||| ||| Sbjct: 80427 tagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgca 80486 Query: 337 acggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcgg 396 | ||||||||| || ||| ||||||||| ||||||||||||||||||||||| ||| | Sbjct: 80487 atggagcttcc--aatttttttttccgagtcaattttctcagttttattaaccc-ggctg 80543 Query: 397 ctctttatt 405 ||||||||| Sbjct: 80544 ctctttatt 80552 Score = 174 bits (88), Expect = 2e-40 Identities = 142/159 (89%), Gaps = 5/159 (3%) Strand = Plus / Plus Query: 461 ttttattatattgatgctttttcacattgcctttt----atgatgtaattcatagaccat 516 |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 80625 ttttattatattgatgctttatcacattgccttttttttatgatgtaattcatagaccat 80684 Query: 517 acacagnggaattctatatcttatttatttcctcttccttctttctatcatccctccctt 576 ||| | ||||| ||||||||| ||||| | |||||||||| |||||||||||||| || Sbjct: 80685 acatatgggaatcctatatctttcttatt-cttcttccttctatctatcatccctccttt 80743 Query: 577 tatccacatccctttagttttgcttcacaacctanaatc 615 ||||||||||||||||||||||||||||| |||| |||| Sbjct: 80744 tatccacatccctttagttttgcttcacagcctagaatc 80782 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 2 aaagaagatctagaatatatcca 24 ||||||||||||||||||||||| Sbjct: 80173 aaagaagatctagaatatatcca 80195
>gb|AY912196.1| Neurolepis aristata ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1206 Score = 353 bits (178), Expect = 4e-94 Identities = 261/291 (89%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 143 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 197 |||||||||||||| ||||||||||| ||| |||||||||||||||||| | |||| Sbjct: 704 atttcgcgggcgaaaatttactcttttctggcttatttgttaatttatattataacctta 645 Query: 198 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 257 ||||||||| ||| |||||||||||||||||||||||||||| | ||||||||| Sbjct: 644 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaaatattaggattc 585 Query: 258 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 317 ||||||||||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 584 ttttcaataaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 525 Query: 318 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 377 ||||||||||||| || ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 524 gttaggtctgaattccacaatggagcttccaaaaaatttctttccgagtcaattttctca 465 Query: 378 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 428 ||||||||||||||||| ||||||||||||||||| ||||||||| ||||| Sbjct: 464 gttttattaacccgggccgctctttattattgcttcaaatttgtatttctt 414 Score = 210 bits (106), Expect = 4e-51 Identities = 148/161 (91%), Gaps = 1/161 (0%) Strand = Plus / Minus Query: 449 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 508 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 404 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 345 Query: 509 tagaccatacacagnggaattctatatcttatttatttcctcttccttctttctatcatc 568 ||||||||||| | ||||| ||||||||| ||| ||||||||| |||||||||||||| Sbjct: 344 tagaccatacatattggaatcctatatctttctta-ttcctcttctttctttctatcatc 286 Query: 569 cctccctttatccacatccctttagttttgcttcacaacct 609 ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 285 cctccttttatccacatccctttagttttgcttcacaacct 245 Score = 73.8 bits (37), Expect = 6e-10 Identities = 99/117 (84%), Gaps = 7/117 (5%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||| | ||| ||||||||| ||| ||||||||| Sbjct: 821 aaagaagatctagaatatatctag-atgcgagtgtctatttatctggattatatatttat 763 Query: 62 agataataatgtagtccttctaaaaaata---tccttatttttactcttattgaatc 115 ||||||| ||| || |||||||||| | ||||||||||||||||||||||||| Sbjct: 762 agataat---gtaatctttctaaaaaaaaatctccttatttttactcttattgaatc 709
>gb|AY847086.1| Danthoniopsis dinteri ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1152 Score = 351 bits (177), Expect = 2e-93 Identities = 285/322 (88%), Gaps = 1/322 (0%) Strand = Plus / Minus Query: 91 tccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcg 150 |||||||||||| ||||||||||||| | |||||||||||||| ||||| |||||||| Sbjct: 737 tccttatttttattcttattgaatcgtg-taaagtattctaatctaataaagatttcgcg 679 Query: 151 ggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaa 210 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct: 678 ggcgaatatttactctttcctgtcttatttgttaatttataaccttaccaaataaagcaa 619 Query: 211 nnnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaat 270 |||||| ||||||||||||||||||||||| ||||||||||||| | ||||| Sbjct: 618 tttttttggtttgatccgccatcccacccaatgaagtattaggattctttttcaaaaaat 559 Query: 271 cctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaat 330 |||||| | ||||||||| |||||||||||| ||||||| || || |||||||| ||||| Sbjct: 558 cctatgcagtcataggttttgtcgttcccacagcttctcttttaaaggttaggtttgaat 499 Query: 331 cccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaaccc 390 || |||| |||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 498 cctgcaatggagcttccaaaaaatttctttccgagtcaattttctcagttttatcaaccg 439 Query: 391 gggcggctctttattattgctt 412 |||| ||||||| ||||||||| Sbjct: 438 gggctgctcttttttattgctt 417 Score = 170 bits (86), Expect = 4e-39 Identities = 140/156 (89%), Gaps = 2/156 (1%) Strand = Plus / Minus Query: 461 ttttattatattgatgctttttcacattgccttttatgatgtaattcatagaccatacac 520 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 371 ttttattatatcgatgctttatcacattgccttttatgatgtaattcatagaccatgcac 312 Query: 521 agnggaattctatatcttatttatttcctcttccttctttctatcatccctccctttatc 580 | ||||| ||||||||| ||| ||| |||||||||| |||||||||||||| |||||| Sbjct: 311 attggaatcctatatctttctta-ttcttcttccttctatctatcatccctccttttatc 253 Query: 581 cacatccctttagttttgcttcacaacctanaatcc 616 ||||| ||||||||||||||| |||| ||| ||||| Sbjct: 252 cacat-cctttagttttgctttacaagctagaatcc 218
>gb|AF133477.1|AF133477 Zea mays ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1190 Score = 351 bits (177), Expect = 2e-93 Identities = 275/309 (88%), Gaps = 2/309 (0%) Strand = Plus / Minus Query: 97 tttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaa 156 |||||| ||||||||||||| |||||||||||||||| ||||||| |||||||||||||| Sbjct: 743 tttttattcttattgaatcgtggtaaagtattctaatccaataaggatttcgcgggcgaa 684 Query: 157 tatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnn 216 ||||||||||||||||||||||||||||||||| || | || ||||||| ||| Sbjct: 683 tatttactctttcctgtcttatttgttaatttagaatcctatcaaataaagcaatttttt 624 Query: 217 nggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatg 276 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 623 tggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatg 564 Query: 277 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 336 | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||||| ||| Sbjct: 563 tagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgca 504 Query: 337 acggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcgg 396 | ||||||||| || ||| ||||||||| ||||||||||||||||||||||||| | Sbjct: 503 atggagcttcc--aatttttttttccgagtcaattttctcagttttattaacccggctga 446 Query: 397 ctctttatt 405 ||||||||| Sbjct: 445 ctctttatt 437 Score = 174 bits (88), Expect = 2e-40 Identities = 142/159 (89%), Gaps = 5/159 (3%) Strand = Plus / Minus Query: 461 ttttattatattgatgctttttcacattgcctttt----atgatgtaattcatagaccat 516 |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 365 ttttattatattgatgctttatcacattgccttttttttatgatgtaattcatagaccat 306 Query: 517 acacagnggaattctatatcttatttatttcctcttccttctttctatcatccctccctt 576 ||| | ||||| ||||||||| ||||| | |||||||||| |||||||||||||| || Sbjct: 305 acatattggaatcctatatctttcttatt-cttcttccttctatctatcatccctccttt 247 Query: 577 tatccacatccctttagttttgcttcacaacctanaatc 615 ||||||||||||||||||||||||||||| |||| |||| Sbjct: 246 tatccacatccctttagttttgcttcacagcctagaatc 208 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatcca 24 ||||||||||||||||||||||| Sbjct: 818 aaagaagatctagaatatatcca 796
>gb|U62791.1|CJU62791 Chusquea juergensii ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1059 Score = 351 bits (177), Expect = 2e-93 Identities = 263/293 (89%), Gaps = 7/293 (2%) Strand = Plus / Minus Query: 143 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 197 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 700 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 641 Query: 198 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 257 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 640 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 581 Query: 258 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 317 ||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 580 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 521 Query: 318 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagt--taattttct 375 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||| Sbjct: 520 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtaaaaattttct 461 Query: 376 cagttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 428 ||||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 460 cagttttattaacccgggccgctctttattattgcttcaaatttttatttctt 408 Score = 190 bits (96), Expect = 4e-45 Identities = 153/171 (89%), Gaps = 5/171 (2%) Strand = Plus / Minus Query: 449 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 508 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 398 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 339 Query: 509 tagaccatacacagn----ggaattctatatcttatttatttcctcttccttctttctat 564 ||||||||||| | ||||| ||||||||| ||||| ||||||| |||||||||| Sbjct: 338 tagaccatacatacatattggaatcctatatctttcttatt-cctcttctttctttctat 280 Query: 565 catccctccctttatccacatccctttagttttgcttcacaacctanaatc 615 ||||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 279 catccctccttttatccacatccctttagttttgcttcacaacctagaatc 229 Score = 77.8 bits (39), Expect = 4e-11 Identities = 100/118 (84%), Gaps = 8/118 (6%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||| ||| ||||||||| Sbjct: 818 aaagaagatctagaatatatctag-atgtgtgtgtctatttatccgtattatatatttat 760 Query: 62 agataataatgtagtccttct----aaaaaatatccttatttttactcttattgaatc 115 || |||||||| || |||| ||||||| ||||||||||||||||||||||||| Sbjct: 759 ag---ataatgtaatctttcttaaaaaaaaatctccttatttttactcttattgaatc 705
>gb|U54756.1|CPU54756 Chusquea pinifolia ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1038 Score = 351 bits (177), Expect = 2e-93 Identities = 263/293 (89%), Gaps = 7/293 (2%) Strand = Plus / Minus Query: 143 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 197 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 700 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 641 Query: 198 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 257 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 640 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 581 Query: 258 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 317 ||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 580 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 521 Query: 318 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagt--taattttct 375 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||| Sbjct: 520 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtaaaaattttct 461 Query: 376 cagttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 428 ||||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 460 cagttttattaacccgggccgctctttattattgcttcaaatttttatttctt 408 Score = 190 bits (96), Expect = 4e-45 Identities = 153/171 (89%), Gaps = 5/171 (2%) Strand = Plus / Minus Query: 449 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 508 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 398 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 339 Query: 509 tagaccatacacagn----ggaattctatatcttatttatttcctcttccttctttctat 564 ||||||||||| | ||||| ||||||||| ||||| ||||||| |||||||||| Sbjct: 338 tagaccatacatacatattggaatcctatatctttcttatt-cctcttctttctttctat 280 Query: 565 catccctccctttatccacatccctttagttttgcttcacaacctanaatc 615 ||||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 279 catccctccttttatccacatccctttagttttgcttcacaacctagaatc 229 Score = 77.8 bits (39), Expect = 4e-11 Identities = 100/118 (84%), Gaps = 8/118 (6%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||| ||| ||||||||| Sbjct: 818 aaagaagatctagaatatatctag-atgtgtgtgtctatttatccgtattatatatttat 760 Query: 62 agataataatgtagtccttct----aaaaaatatccttatttttactcttattgaatc 115 || |||||||| || |||| ||||||| ||||||||||||||||||||||||| Sbjct: 759 ag---ataatgtaatctttcttaaaaaaaaatctccttatttttactcttattgaatc 705
>gb|AY847083.1| Paspalum conjugatum ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1157 Score = 349 bits (176), Expect = 7e-93 Identities = 305/352 (86%), Gaps = 10/352 (2%) Strand = Plus / Minus Query: 94 ttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggc 153 ||||||||| ||||||||||||| |||||||||| |||| ||||||||||| Sbjct: 733 ttatttttattcttattgaatcgtggtaaagtat----------taaggatttcgcgggc 684 Query: 154 gaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannn 213 |||||||||||||||||||||||||||||||||||| || |||| ||||||| ||| Sbjct: 683 gaatatttactctttcctgtcttatttgttaatttagaaccttatcaaataaagcaattt 624 Query: 214 nnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcct 273 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 623 ttttggtttgctccgccatcccacccaatgaagtgttaggattcttttcaataaaatcct 564 Query: 274 atggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatccc 333 ||| | ||||||||| |||||||||||| |||||||||| ||||| ||||| ||||||| Sbjct: 563 atgcagtcataggttttgtcgttcccacagcttctcctttaatggctaggtttgaatcct 504 Query: 334 gcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccggg 393 |||| |||||||| |||||||| |||||||||| |||||||||||||||||||||||||| Sbjct: 503 gcaatggagcttcaaaaaaattgctttccgagtcaattttctcagttttattaacccggg 444 Query: 394 cggctctttattattgcttaaaatttgtagttcttctttcaagttacaattt 445 | ||||||| ||||||||| ||||| || || || ||||||||||| |||| Sbjct: 443 ctgctcttttttattgctttcaatttttatttgttgtttcaagttacgattt 392 Score = 172 bits (87), Expect = 9e-40 Identities = 134/148 (90%), Gaps = 4/148 (2%) Strand = Plus / Minus Query: 461 ttttattatattgatgctttttcacattgcctttt---atgatgtaattcatagaccata 517 |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct: 370 ttttattatattgatgctttatcacattgcctttttttatgatgtaattcatagaccata 311 Query: 518 cacagnggaattctatatcttatttatttcctcttccttctttctatcatccctcccttt 577 |||| ||||| |||||||| ||||| | |||||||||| |||||||||||||| ||| Sbjct: 310 cacattggaatcctatatctctcttatt-cttcttccttctatctatcatccctcctttt 252 Query: 578 atccacatccctttagttttgcttcaca 605 |||||||||||||||||||||||||||| Sbjct: 251 atccacatccctttagttttgcttcaca 224
>gb|AY847078.1| Eragrostis curvula ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1163 Score = 349 bits (176), Expect = 7e-93 Identities = 295/337 (87%), Gaps = 10/337 (2%) Strand = Plus / Minus Query: 87 aatatccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaattt 146 ||||||||||||||||| ||||||||||| ||||||||||| ||| ||||||| |||| Sbjct: 755 aatatccttatttttacccttattgaatcatagtaaagtattcgaatccaataaggattt 696 Query: 147 cgcgggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataag 206 ||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||| Sbjct: 695 cgcgggcgaatatttactctttcttgtcttatttgttaatttataaccttaacaaataaa 636 Query: 207 acaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaata 266 ||| |||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 635 gcaatttttttggtttgttccgccatcccacccaatgaagtattaggattcttttcaata 576 Query: 267 ----aaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatggttag 322 |||||||||| | |||||| || |||||||||||| |||||||||| ||||||||| Sbjct: 575 aaataaatcctatgcagtcatagcttttgtcgttcccacagcttctcctttaatggttag 516 Query: 323 gtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctcagtttt 382 || ||||||| |||| |||||||||||| ||||||||||||||| |||||||||| Sbjct: 515 gtttgaatcctgcaatggagcttccaaa------ctttccgagttaattctctcagtttt 462 Query: 383 attaacccgggcggctctttattattgcttaaaattt 419 |||||||||||| ||||||||||||||||| |||||| Sbjct: 461 attaacccgggctgctctttattattgctttaaattt 425 Score = 192 bits (97), Expect = 1e-45 Identities = 141/155 (90%), Gaps = 1/155 (0%) Strand = Plus / Minus Query: 461 ttttattatattgatgctttttcacattgccttttatgatgtaattcatagaccatacac 520 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 374 ttttattatattgatgctttatcacattgccttttatgatgtaattcatagaccatacac 315 Query: 521 agnggaattctatatcttatttatttcctcttccttctttctatcatccctccctttatc 580 | ||||| |||||||| ||| ||| |||||||||| |||||||||||||| |||||| Sbjct: 314 attggaatcttatatctttctta-ttcttcttccttctatctatcatccctccttttatc 256 Query: 581 cacatccctttagttttgcttcacaacctanaatc 615 |||||||||||||||||| || |||||||| |||| Sbjct: 255 cacatccctttagttttgttttacaacctagaatc 221
>gb|AF133480.1|AF133480 Zoysia matrella ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1204 Score = 347 bits (175), Expect = 3e-92 Identities = 296/337 (87%), Gaps = 5/337 (1%) Strand = Plus / Minus Query: 87 aatatccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaattt 146 |||||||||||||| |||| || || ||| ||||| ||||||||| |||||| |||| Sbjct: 786 aatatccttattttgactccta-tggatcatagtaaactattctaatccaataaagattt 728 Query: 147 cgcgggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataag 206 ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| Sbjct: 727 cgcgggcgaatatttactctttcttgtcttatttgttaatttataaccttaccaaataaa 668 Query: 207 acaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaata 266 ||| |||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 667 gcaatttttttggtttgttccgccatcccacccaatgaagtattaggattcttttcaata 608 Query: 267 a----aatcctatggaatcataggttctgtcgttcccactgcttctccttgaatggttag 322 | ||||||||| | ||||||||| |||||||||||| |||||||||| ||||||||| Sbjct: 607 aaatcaatcctatgcagtcataggttttgtcgttcccacagcttctcctttaatggttag 548 Query: 323 gtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctcagtttt 382 || ||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 547 gtttgaatcctgcaatggagcttccaaaaaatttctttccgagtcaattttctcagtttt 488 Query: 383 attaacccgggcggctctttattattgcttaaaattt 419 |||||| ||||| ||||||| ||||| ||| |||||| Sbjct: 487 attaacgcgggctgctcttttttatttctttaaattt 451 Score = 153 bits (77), Expect = 8e-34 Identities = 140/158 (88%), Gaps = 4/158 (2%) Strand = Plus / Minus Query: 461 ttttattatattgatgctttttcacattgccttttatgatgtaattcatagaccatacac 520 |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| Sbjct: 399 ttttattatattgatgctttatcacattgc-ttttatgatgtaattcatagaccatacat 341 Query: 521 agnggaattctatatctta-tttatt--tcctcttccttctttctatcatccctcccttt 577 | ||||| |||||||| ||| || || |||||||||| |||||||||||||| ||| Sbjct: 340 attggaatcttatatctttctttcttattcttcttccttctatctatcatccctcctttt 281 Query: 578 atccacatccctttagttttgcttcacaacctanaatc 615 |||||||||||||||||||| ||||||||||| |||| Sbjct: 280 atccacatccctttagttttctttcacaacctagaatc 243
>gb|AY847105.1| Zeugites americanus ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 944 Score = 343 bits (173), Expect = 4e-91 Identities = 324/375 (86%), Gaps = 5/375 (1%) Strand = Plus / Minus Query: 128 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 187 |||||| |||||| ||||||||||||||| |||||||||||||| ||||||||||| || Sbjct: 592 tctaatccaataaagatttcgcgggcgaatgtttactctttcctgccttatttgtta-tt 534 Query: 188 tataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagt 247 ||||| |||||||||||| | | |||||||||||||||||||||||||||||| Sbjct: 533 tataaccttaccaaataaagccatttttttggtttgttccgccatcccacccaatgaagt 474 Query: 248 gttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 307 |||||||||||||| |||||||||||| | ||||||||| | |||||||||| ||||| Sbjct: 473 attaggattcttttccataaaatcctatccagtcataggttttttcgttcccacagcttc 414 Query: 308 tccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagtt 367 ||||| ||||||||||| ||||||| |||| ||||||||||||||||||||||||| || Sbjct: 413 tcctttaatggttaggtttgaatcctgcaatggagcttccaaaaaatttctttccgggtc 354 Query: 368 aattttctcagttttattaacccgggcggctctttattattgcttaaaatttgtagttct 427 ||||||||||||||||||||| ||||| ||||||| ||||||||| |||||| || || | Sbjct: 353 aattttctcagttttattaactcgggctgctcttttttattgctttaaatttttatttat 294 Query: 428 tctttcaagttacaatttttcattctctattagtt----ttattatattgatgctttttc 483 | ||||||||||| |||| ||||||| || || |||||||||||||||||| || Sbjct: 293 tgtttcaagttacgatttcgaattctctctttttttttcttattatattgatgctttatc 234 Query: 484 acattgccttttatg 498 ||||||||||||||| Sbjct: 233 acattgccttttatg 219
>gb|U62783.1|CSU62783 Chusquea sp. B ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1031 Score = 343 bits (173), Expect = 4e-91 Identities = 253/282 (89%), Gaps = 5/282 (1%) Strand = Plus / Minus Query: 143 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 197 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 694 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 635 Query: 198 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 257 ||||||||| | | |||||||||||||||||||||||||||||| ||||||||| Sbjct: 634 ccaaataaggccatttttttggtttgttccgccatcccacccaatgaagtattaggattc 575 Query: 258 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 317 ||||||| ||||||||||| | ||||||||||||||||||||| | ||||||||| |||| Sbjct: 574 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccattacttctcctttaatg 515 Query: 318 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 377 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 514 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtaaattttctca 455 Query: 378 gttttattaacccgggcggctctttattattgcttaaaattt 419 ||||||||||||||||| |||||||||||| |||| |||||| Sbjct: 454 gttttattaacccgggccgctctttattatggcttcaaattt 413 Score = 208 bits (105), Expect = 2e-50 Identities = 152/167 (91%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 449 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 508 ||||||| ||| ||||||||||| |||||||| ||||||||||||||||||||||| ||| Sbjct: 394 attctctgttatttttattatatggatgctttatcacattgccttttatgatgtaactca 335 Query: 509 tagaccatacacagnggaattctatatcttatttatttcctcttccttctttctatcatc 568 ||||||||||| | ||||| ||||||||| ||||| ||||||| |||||||||||||| Sbjct: 334 tagaccatacatattggaatcctatatctttcttatt-cctcttctttctttctatcatc 276 Query: 569 cctccctttatccacatccctttagttttgcttcacaacctanaatc 615 ||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 275 cctccttttatccacatccctttagttttgcttcacaacctagaatc 229 Score = 89.7 bits (45), Expect = 1e-14 Identities = 101/117 (86%), Gaps = 7/117 (5%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||| ||| ||||||||| Sbjct: 811 aaagaagatctagaatatatctag-atgtgtgtgtctatttatccgtattatatatttat 753 Query: 62 agataataatgtagtccttct---aaaaaatatccttatttttactcttattgaatc 115 ||||||| ||| || |||| ||||||||||||||||||||||||||||||||| Sbjct: 752 agataat---gtaatctttcttaaaaaaaatatccttatttttactcttattgaatc 699
>gb|U54755.1|CWU54755 Chusquea windischii ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1034 Score = 343 bits (173), Expect = 4e-91 Identities = 262/293 (89%), Gaps = 7/293 (2%) Strand = Plus / Minus Query: 143 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 197 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 696 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 637 Query: 198 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 257 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 636 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 577 Query: 258 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 317 ||||||| ||||||||| | | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 576 ttttcaaaaaaatcctaggcagtcataggttctgtcgttcccactacttctcctttaatg 517 Query: 318 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagt--taattttct 375 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||| Sbjct: 516 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtaaaaattttct 457 Query: 376 cagttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 428 ||||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 456 cagttttattaacccgggccgctctttattattgcttcaaatttttatttctt 404 Score = 218 bits (110), Expect = 2e-53 Identities = 154/168 (91%), Gaps = 1/168 (0%) Strand = Plus / Minus Query: 449 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 508 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 394 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 335 Query: 509 tagaccatacacagnggaattctatatcttatttatttcctcttccttctttctatcatc 568 ||||||||||| | ||||| ||||||||| ||||| ||||||| |||||||||||||| Sbjct: 334 tagaccatacatattggaatcctatatctttcttatt-cctcttctttctttctatcatc 276 Query: 569 cctccctttatccacatccctttagttttgcttcacaacctanaatcc 616 ||||| |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 275 cctccttttatccacatccctttagttttgcttcacaacctagaatcc 228 Score = 77.8 bits (39), Expect = 4e-11 Identities = 100/118 (84%), Gaps = 8/118 (6%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||| ||| ||||||||| Sbjct: 814 aaagaagatctagaatatatctag-atgtgtgtgtctatttatccgtattatatatttat 756 Query: 62 agataataatgtagtccttct----aaaaaatatccttatttttactcttattgaatc 115 || |||||||| || |||| ||||||| ||||||||||||||||||||||||| Sbjct: 755 ag---ataatgtaatctttcttaaaaaaaaatctccttatttttactcttattgaatc 701
>gb|AY847103.1| Pohlidium petiolatum rpl16 gene, intron; chloroplast Length = 1018 Score = 339 bits (171), Expect = 7e-90 Identities = 260/292 (89%) Strand = Plus / Minus Query: 128 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 187 |||||| |||||| ||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 663 tctaatccaataaagatttcgcgggcgaatgtttaccctttcctgtcttatttgttaatt 604 Query: 188 tataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagt 247 ||||| |||||||||||| | | |||||||||||||||||||||||||||||| Sbjct: 603 tataaccttaccaaataaagccatttttttggtttgttccgccatcccacccaatgaagt 544 Query: 248 gttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 307 |||||||||||||||| |||||||||| | ||||||||| |||||||||||| ||||| Sbjct: 543 attaggattcttttcaaaaaaatcctatccagtcataggttttgtcgttcccacagcttc 484 Query: 308 tccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagtt 367 ||||| ||||||||||| ||||||| |||| |||||||||||||||||||||||||||| Sbjct: 483 tcctttaatggttaggtttgaatcctgcaatggagcttccaaaaaatttctttccgagtc 424 Query: 368 aattttctcagttttattaacccgggcggctctttattattgcttaaaattt 419 |||||||||||||||||||||| |||| ||||||| ||||||||| |||||| Sbjct: 423 aattttctcagttttattaaccggggctgctcttttttattgcttgaaattt 372 Score = 135 bits (68), Expect = 2e-28 Identities = 118/134 (88%), Gaps = 1/134 (0%) Strand = Plus / Minus Query: 465 attatattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagng 524 |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| | Sbjct: 320 attatattgatgctttatcacattgccttttatgacgtaattcatagaccatacacattg 261 Query: 525 gaattctatatcttatttatttcctcttccttctttctatcatccctccctttatccaca 584 |||| ||||||||| ||| ||| | |||||||| ||||||||||||| ||||| || Sbjct: 260 gaatcctatatctttctta-ttctttttccttctacctatcatccctccttttatntgca 202 Query: 585 tccctttagttttg 598 |||||||||||||| Sbjct: 201 tccctttagttttg 188
>ref|XM_506652.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1001_G09.24 mRNA Length = 1742 Score = 335 bits (169), Expect = 1e-88 Identities = 324/373 (86%), Gaps = 6/373 (1%) Strand = Plus / Minus Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 371 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 312 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | |||||||||||||||||||||| |||||||||| ||||||||||| | |||| | ||| Sbjct: 311 agtcataggttctgtcgttcccacggcttctcctttaatggttaggttttaatctcacaa 252 Query: 338 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 397 |||||||||||||||||||||||| ||| || |||||||||||||||||| |||| | Sbjct: 251 tggagcttccaaaaaatttctttccaagtcaa-tttctcagttttattaactcgggacac 193 Query: 398 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 453 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 192 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 133 Query: 454 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 513 | ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 132 ttgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 73 Query: 514 catacacagnggaattctatatcttatttatttcctcttccttctttctatcatccctcc 573 |||||| | ||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 72 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 14 Query: 574 ctttatccacatc 586 |||||| ||||| Sbjct: 13 ttttatctacatc 1 Score = 165 bits (83), Expect = 2e-37 Identities = 86/87 (98%) Strand = Plus / Minus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 478 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 419 Query: 158 atttactctttcctgtcttatttgtta 184 ||||||||||||||||||||||||||| Sbjct: 418 atttactctttcctgtcttatttgtta 392 Score = 54.0 bits (27), Expect = 6e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 ||||| ||||||||||||||| || |||||| || |||||||||| |||||||||||| Sbjct: 568 aaagaggatctagaatatatctag-atgtgtatgtttatttatctatattctatattta 511
>gb|AY847094.1| Centotheca lappacea ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 815 Score = 335 bits (169), Expect = 1e-88 Identities = 307/355 (86%), Gaps = 9/355 (2%) Strand = Plus / Minus Query: 91 tccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcg 150 |||||||||||| ||||||||||||| | |||||||||||||| || |||||| Sbjct: 397 tccttatttttattcttattgaatcgtg-taaagtattctaatcca--------ttcgcg 347 Query: 151 ggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaa 210 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct: 346 ggcgaatatttactctttcctgtcttatttgttaatttataaccttaccaaataaagcaa 287 Query: 211 nnnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaat 270 |||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 286 tttttttggtttgttccgccatcccgcccaatgaagtattaggattcttttcaataaaat 227 Query: 271 cctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaat 330 |||||| | ||||| ||| |||||||||||| |||||||||| ||||||||||| ||||| Sbjct: 226 cctatgcagtcataagttttgtcgttcccacagcttctcctttaatggttaggtttgaat 167 Query: 331 cccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaaccc 390 || |||| |||||||||||||||||| ||||||| | ||||||||||||||||||||||| Sbjct: 166 cctgcaatggagcttccaaaaaatttatttccgaatcaattttctcagttttattaaccc 107 Query: 391 gggcggctctttattattgcttaaaatttgtagttcttctttcaagttacaattt 445 ||| ||||||| ||| |||| |||||| || || || ||| ||||||| |||| Sbjct: 106 cggctgctcttttttaccgctttaaatttttatttattgtttgaagttacgattt 52 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatcca 24 ||||||||||||||||||||||| Sbjct: 460 aaagaagatctagaatatatcca 438
>gb|AF133491.1|AF133491 Joinvillea ascendens ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1229 Score = 327 bits (165), Expect = 3e-86 Identities = 281/319 (88%), Gaps = 6/319 (1%) Strand = Plus / Minus Query: 97 tttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaa 156 ||||||||||||| ||||||||| ||| |||| |||| |||||| |||||||||||||| Sbjct: 757 tttttactcttatcgaatcgcggcaaaatattgtaatccaataaagatttcgcgggcgaa 698 Query: 157 tatttactctttcctgtcttatttg----ttaatttataaacttaccaaataagacaann 212 ||||||||||||||||||||||| | | |||| |||| ||||||||||||||||| Sbjct: 697 tatttactctttcctgtcttattcgaggttcaattcataaccttaccaaataagacaatt 638 Query: 213 nnnnnggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatc 271 |||||||||||||||||||||||||||| | ||||||||| ||||||||| |||| Sbjct: 637 ttcttggtttgttccgccatcccacccaatgaattcttaggattcgttttcaatagaatc 578 Query: 272 ctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatc 331 ||||| | |||||||||||||||||||||| |||||||| | |||||||||||||||| | Sbjct: 577 ctatgcagtcataggttctgtcgttcccacagcttctccattaatggttaggtctgaacc 518 Query: 332 ccgcaacggagcttcc-aaaaaatttctttccgagttaattttctcagttttattaaccc 390 |||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 517 ccgcaatggagcttccaaaaaaatttctttccgagtcaattttctcagttttattaaccc 458 Query: 391 gggcggctctttattattg 409 || |||||||||||||| Sbjct: 457 agggtgctctttattattg 439 Score = 163 bits (82), Expect = 9e-37 Identities = 131/145 (90%), Gaps = 2/145 (1%) Strand = Plus / Minus Query: 464 tattatattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagn 523 ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| | Sbjct: 385 tattatattgatgctttctcacactgccttttatgatgtaattcatagaccatacatatt 326 Query: 524 ggaattctatatcttatttatttcctcttccttctttctatcatccctccctttatccac 583 ||||| ||||||||| ||| ||| | ||| ||||||||||||||||||| ||||||||| Sbjct: 325 ggaatcctatatctttctta-ttcttgttctttctttctatcatccctccatttatccac 267 Query: 584 atccctttagttttgcttcacaacc 608 ||||||||| ||||||||||||||| Sbjct: 266 atcccttta-ttttgcttcacaacc 243
>gb|AY912198.1| Guadua angustifolia ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1079 Score = 323 bits (163), Expect = 4e-85 Identities = 240/268 (89%), Gaps = 5/268 (1%) Strand = Plus / Minus Query: 171 tgtcttatttgttaatttata-----aacttaccaaataagacaannnnnnnggtttgtt 225 ||||||||||||||||||||| | ||||||||||||| ||| |||||||| Sbjct: 559 tgtcttatttgttaatttatattagaaccttaccaaataaggcaatttttttggtttgtt 500 Query: 226 ccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatcatag 285 |||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||| Sbjct: 499 ccgccatcccacccaatgaagtattaggattcttttcaataaaatcctatgcagtcatag 440 Query: 286 gttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacggagctt 345 ||||||||||||||||| ||||||||| ||||||||||||||||| || ||| ||||||| Sbjct: 439 gttctgtcgttcccactacttctcctttaatggttaggtctgaattccacaatggagctt 380 Query: 346 ccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctctttatt 405 ||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||| Sbjct: 379 ccaaaaaatttctttccaagtcaattttctcagttttattaacccgggccgctctttatt 320 Query: 406 attgcttaaaatttgtagttcttctttc 433 ||||||| ||||||||| ||||| |||| Sbjct: 319 attgcttcaaatttgtatttcttgtttc 292 Score = 174 bits (88), Expect = 2e-40 Identities = 130/142 (91%), Gaps = 2/142 (1%) Strand = Plus / Minus Query: 475 tgctttttcacattgccttttatgatgtaattcatagaccatacacagnggaattctata 534 |||||| |||||| ||||||||||||||||||||||||||||||| | ||||| ||||| Sbjct: 244 tgctttatcacat-gccttttatgatgtaattcatagaccatacatattggaatcctata 186 Query: 535 tcttatttatttcctcttccttctttctatcatccctccctttatccacatccctttagt 594 |||| ||||| ||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 185 tctttcttatt-cctcttctttctttctatcatccctccttttatccacatccctttagt 127 Query: 595 tttgcttcacaacctanaatcc 616 |||||||||||||||| ||||| Sbjct: 126 tttgcttcacaacctagaatcc 105 Score = 147 bits (74), Expect = 5e-32 Identities = 127/143 (88%), Gaps = 10/143 (6%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||||| ||||||||||||| Sbjct: 700 aaagaagatctagaatatatctag-atgtgtgtgtctatttatctatattctatatttat 642 Query: 62 agataataatgtagtccttct------aaaaaatatccttatttttactcttattgaatc 115 ||||||| ||| ||||||| ||||||| ||||||||||||||||||||||||| Sbjct: 641 agataat---gtaatccttcttaaaaaaaaaaatctccttatttttactcttattgaatc 585 Query: 116 gcggtaaagtattctaattcaat 138 ||||||||||||||||||||||| Sbjct: 584 gcggtaaagtattctaattcaat 562
>gb|AF133478.1|AF133478 Sorghum bicolor ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1200 Score = 323 bits (163), Expect = 4e-85 Identities = 258/293 (88%), Gaps = 8/293 (2%) Strand = Plus / Minus Query: 97 tttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaa 156 |||||| ||||||||||||| ||||||||||||||| | |||||||||||||| Sbjct: 762 tttttattcttattgaatcgtggtaaagtattctaa--------ggatttcgcgggcgaa 711 Query: 157 tatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnn 216 ||||||||||||||||||||||||||||||||| || |||| ||||||| ||| Sbjct: 710 tatttactctttcctgtcttatttgttaatttagaaccttatcaaataaagcaaattttt 651 Query: 217 nggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatg 276 ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct: 650 tggtttgttccgccatcccacccaatgaagagttaggattctttccaataaaatcctatg 591 Query: 277 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 336 | ||||||| | |||||||||||| |||||||||| ||||||||||| ||||||| ||| Sbjct: 590 tagtcataggctttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgca 531 Query: 337 acggagcttccaaaaaatttctttccgagttaattttctcagttttattaacc 389 | |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 530 atggagcttccaaaaaatttctttccgagtcaattttctcagttttattaacc 478 Score = 186 bits (94), Expect = 6e-44 Identities = 143/158 (90%), Gaps = 4/158 (2%) Strand = Plus / Minus Query: 461 ttttattatattgatgctttttcacattgcctttt---atgatgtaattcatagaccata 517 |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct: 395 ttttattatattgatgctttatcacattgcctttttttatgatgtaattcatagaccata 336 Query: 518 cacagnggaattctatatcttatttatttcctcttccttctttctatcatccctcccttt 577 |||| ||||| ||||||||| ||||| | |||||||||| |||||||||||||| ||| Sbjct: 335 cacatgggaatcctatatctttcttatt-cttcttccttctatctatcatccctcctttt 277 Query: 578 atccacatccctttagttttgcttcacaacctanaatc 615 |||||||||||||||||||||||||||| |||| |||| Sbjct: 276 atccacatccctttagttttgcttcacagcctagaatc 239 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatc 22 ||||||||||||||||||||| Sbjct: 835 aaagaagatctagaatatatc 815
>gb|U62792.1|CNU62792 Chusquea nudiramea ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1034 Score = 319 bits (161), Expect = 6e-84 Identities = 259/293 (88%), Gaps = 7/293 (2%) Strand = Plus / Minus Query: 143 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 197 ||||||||||||||| | ||||||| ||||||||| |||| |||||||| | |||| Sbjct: 696 atttcgcgggcgaatgtatactcttgcctgtcttaattgtcaatttatattataacctta 637 Query: 198 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 257 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 636 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 577 Query: 258 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 317 ||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 576 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 517 Query: 318 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagt--taattttct 375 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||| Sbjct: 516 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtaaaaattttct 457 Query: 376 cagttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 428 ||||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 456 cagttttattaacccgggccgctctttattattgcttcaaatttttatttctt 404 Score = 218 bits (110), Expect = 2e-53 Identities = 154/168 (91%), Gaps = 1/168 (0%) Strand = Plus / Minus Query: 449 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 508 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 394 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 335 Query: 509 tagaccatacacagnggaattctatatcttatttatttcctcttccttctttctatcatc 568 ||||||||||| | ||||| ||||||||| ||||| ||||||| |||||||||||||| Sbjct: 334 tagaccatacatattggaatcctatatctttcttatt-cctcttctttctttctatcatc 276 Query: 569 cctccctttatccacatccctttagttttgcttcacaacctanaatcc 616 ||||| |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 275 cctccttttatccacatccctttagttttgcttcacaacctagaatcc 228 Score = 77.8 bits (39), Expect = 4e-11 Identities = 100/118 (84%), Gaps = 8/118 (6%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatatttat 61 ||||||||||||||||||||| || ||||||||| |||||||| ||| ||||||||| Sbjct: 814 aaagaagatctagaatatatctag-atgtgtgtgtctatttatccgtattatatatttat 756 Query: 62 agataataatgtagtccttct----aaaaaatatccttatttttactcttattgaatc 115 || |||||||| || |||| ||||||| ||||||||||||||||||||||||| Sbjct: 755 ag---ataatgtaatctttcttaaaaaaaaatctccttatttttactcttattgaatc 701
>gb|AY847101.1| Orthoclada laxa ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1068 Score = 301 bits (152), Expect = 1e-78 Identities = 278/322 (86%), Gaps = 4/322 (1%) Strand = Plus / Minus Query: 128 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 187 |||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 716 tctaatccaataaagatttcgcgggcgaatgtttactctttcctgtcttatttgttaatt 657 Query: 188 tataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagt 247 ||||| |||||||||||| | | |||||||||||||||||||||||||||| | Sbjct: 656 tataaccttaccaaataaagccatttttttggtttgttccgccatcccacccaatgaaat 597 Query: 248 gttaggattcttttcaataaaat----cctatggaatcataggttctgtcgttcccactg 303 |||||||||||||||||||||| ||||| | ||||||||| |||||||||||| | Sbjct: 596 attaggattcttttcaataaaataaatcctatccagtcataggttttgtcgttcccacag 537 Query: 304 cttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccg 363 ||||||||| |||||||||| ||||| | |||| ||||||||||||||||||||||||| Sbjct: 536 cttctcctttaatggttaggattgaattctgcaatggagcttccaaaaaatttctttccg 477 Query: 364 agttaattttctcagttttattaacccgggcggctctttattattgcttaaaatttgtag 423 || |||||||||||||||||||||||||| ||||||| ||||||||| ||||||| | Sbjct: 476 agcccattttctcagttttattaacccgggctgctcttttttattgctttaaatttggat 417 Query: 424 ttcttctttcaagttacaattt 445 || || ||||||| ||| |||| Sbjct: 416 ttattgtttcaaggtacgattt 395 Score = 170 bits (86), Expect = 4e-39 Identities = 127/140 (90%), Gaps = 1/140 (0%) Strand = Plus / Minus Query: 476 gctttttcacattgccttttatgatgtaattcatagaccatacacagnggaattctatat 535 |||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||| Sbjct: 357 gctttttcacattgccttttatgatgtaattcatagcccatacacattggaatcctatat 298 Query: 536 cttatttatttcctcttccttctttctatcatccctccctttatccacatccctttagtt 595 ||| ||| | | |||||||||| ||||||||||||| ||||||||||||||||||||| Sbjct: 297 ctttcttaat-cttcttccttctacctatcatccctccttttatccacatccctttagtt 239 Query: 596 ttgcttcacaacctanaatc 615 ||||||||||||||| |||| Sbjct: 238 ttgcttcacaacctagaatc 219
>gb|AY847111.1| Zeugites sagittatus ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1018 Score = 281 bits (142), Expect = 1e-72 Identities = 214/238 (89%) Strand = Plus / Minus Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 570 ggtttgttccgccatcccccccaatgaagtattaggattcttttcaataaaatcctatcc 511 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||||| |||| Sbjct: 510 agtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgcaa 451 Query: 338 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 397 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || Sbjct: 450 tggagcttccaaaaaatttctttccgagtcaattttctcagttttattaacccgggctgc 391 Query: 398 tctttattattgcttaaaatttgtagttcttctttcaagttacaatttttcattctct 455 ||||| ||||||||| ||||| | || || ||||||||||| |||| | ||||||| Sbjct: 390 tcttttttattgcttgcaatttttttttattgtttcaagttacgatttctaattctct 333 Score = 176 bits (89), Expect = 6e-41 Identities = 125/136 (91%), Gaps = 1/136 (0%) Strand = Plus / Minus Query: 461 ttttattatattgatgctttttcacattgccttttatgatgtaattcatagaccatacac 520 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 318 ttttattatattgatgctttatcacattgccttttatgatgtaattcatagaccatacac 259 Query: 521 agnggaattctatatcttatttatttcctcttccttctttctatcatccctccctttatc 580 | ||||| ||||||||| |||| ||| | |||||||| ||||||||||||| |||||| Sbjct: 258 attggaatcctatatctttttta-ttctttttccttctacctatcatccctccttttatc 200 Query: 581 cacatccctttagttt 596 |||||||||||||||| Sbjct: 199 cacatccctttagttt 184 Score = 107 bits (54), Expect = 4e-20 Identities = 72/78 (92%) Strand = Plus / Minus Query: 128 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 187 |||||| |||||| ||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 659 tctaatccaataaagatttcgcgggcgaatgtttactctttcctgtcttatttggtaatt 600 Query: 188 tataaacttaccaaataa 205 ||||| |||||||||||| Sbjct: 599 tataaccttaccaaataa 582
>gb|AY847102.1| Lophatherum gracile ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1078 Score = 281 bits (142), Expect = 1e-72 Identities = 214/238 (89%) Strand = Plus / Minus Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 630 ggtttgttccgccatcccccccaatgaagtattaggattcttttcaataaaatcctatcc 571 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||||| |||| Sbjct: 570 agtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgcaa 511 Query: 338 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 397 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || Sbjct: 510 tggagcttccaaaaaatttctttccgagtcaattttctcagttttattaacccgggctgc 451 Query: 398 tctttattattgcttaaaatttgtagttcttctttcaagttacaatttttcattctct 455 ||||| ||||||||| ||||| | || || ||||||||||| |||| | ||||||| Sbjct: 450 tcttttttattgcttgcaatttttttttattgtttcaagttacgatttctaattctct 393 Score = 176 bits (89), Expect = 6e-41 Identities = 125/136 (91%), Gaps = 1/136 (0%) Strand = Plus / Minus Query: 461 ttttattatattgatgctttttcacattgccttttatgatgtaattcatagaccatacac 520 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 378 ttttattatattgatgctttatcacattgccttttatgatgtaattcatagaccatacac 319 Query: 521 agnggaattctatatcttatttatttcctcttccttctttctatcatccctccctttatc 580 | ||||| ||||||||| |||| ||| | |||||||| ||||||||||||| |||||| Sbjct: 318 attggaatcctatatctttttta-ttctttttccttctacctatcatccctccttttatc 260 Query: 581 cacatccctttagttt 596 |||||||||||||||| Sbjct: 259 cacatccctttagttt 244 Score = 107 bits (54), Expect = 4e-20 Identities = 72/78 (92%) Strand = Plus / Minus Query: 128 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 187 |||||| |||||| ||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 719 tctaatccaataaagatttcgcgggcgaatgtttactctttcctgtcttatttggtaatt 660 Query: 188 tataaacttaccaaataa 205 ||||| |||||||||||| Sbjct: 659 tataaccttaccaaataa 642
>gb|AY847113.1| Micraira lazaridis ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 757 Score = 278 bits (140), Expect = 2e-71 Identities = 214/238 (89%), Gaps = 2/238 (0%) Strand = Plus / Minus Query: 175 ttatttgttaatttataaacttaccaaataagacaannnnnnnggtttgttccgccatcc 234 |||||||||||||||||| |||||||||||| ||| ||||||||||||||||| Sbjct: 325 ttatttgttaatttataa-cttaccaaataaagcaatttttt-ggtttgttccgccatcc 268 Query: 235 cacccaatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcg 294 ||||||||||||| |||||||||||||||||||||||||||| | ||||||||| ||||| Sbjct: 267 cacccaatgaagtattaggattcttttcaataaaatcctatgcagtcataggttttgtcg 208 Query: 295 ttcccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaat 354 ||||||| |||||||||| ||||||||||| ||||||| |||| |||||||||||||||| Sbjct: 207 ttcccacagcttctcctttaatggttaggtttgaatcctgcaatggagcttccaaaaaat 148 Query: 355 ttctttccgagttaattttctcagttttattaacccgggcggctctttattattgctt 412 || ||||||||| ||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 147 ttatttccgagtcaattttctcagttttattaacccgggctactctttattaatgctt 90 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 461 ttttattatattgatgctttttcacattgcctttta 496 ||||| |||||||||||||| ||||||||||||||| Sbjct: 36 ttttaatatattgatgctttatcacattgcctttta 1 Score = 52.0 bits (26), Expect = 0.002 Identities = 49/54 (90%), Gaps = 2/54 (3%) Strand = Plus / Minus Query: 87 aatatccttatttttactct-tattgaatcgcggtaaagtattctaattcaata 139 |||| ||||||||||||||| |||| ||||| |||||||||||||||| ||||| Sbjct: 378 aatacccttatttttactctatatt-aatcgtggtaaagtattctaatacaata 326 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatcca 24 ||||||||||||||||||||||| Sbjct: 440 aaagaagatctagaatatatcca 418
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 272 bits (137), Expect = 1e-69 Identities = 271/309 (87%), Gaps = 9/309 (2%) Strand = Plus / Plus Query: 97 tttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaa 156 |||||| ||||||||||||| |||||||||||||||| ||||||| |||||||||||||| Sbjct: 80231 tttttattcttattgaatcgtggtaaagtattctaatccaataaggatttcgcgggcgaa 80290 Query: 157 tatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnn 216 ||||||||||||||||||||||||||||||||| || |||| ||||||| ||| Sbjct: 80291 tatttactctttcctgtcttatttgttaatttagaaccttatcaaataaagcaattttgt 80350 Query: 217 nggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatg 276 ||||||| ||||||||| ||||||||||||||||||||||| ||||||| ||||||| Sbjct: 80351 -ggtttgt-ccgccatcca--ccaatgaagtgttaggattcttt-caataaa-tcctatg 80404 Query: 277 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 336 | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||||| ||| Sbjct: 80405 tagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgca 80464 Query: 337 acggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcgg 396 | ||||||||| || ||| ||||||||| ||||||||||||||||||||||| ||| | Sbjct: 80465 atggagcttcc--aatttttttttccgagtcaattttctcagttttattaaccc-ggctg 80521 Query: 397 ctctttatt 405 ||||||||| Sbjct: 80522 ctctttatt 80530 Score = 135 bits (68), Expect = 2e-28 Identities = 138/159 (86%), Gaps = 6/159 (3%) Strand = Plus / Plus Query: 461 ttttattatattgatgctttttcacattgcctttt----atgatgtaattcatagaccat 516 |||||||||||||||||||| |||||||||||||| |||||| |||||||||||||| Sbjct: 80600 ttttattatattgatgctttatcacattgccttttttttatgatg-aattcatagaccat 80658 Query: 517 acacagnggaattctatatcttatttatttcctcttccttctttctatcatccctccctt 576 ||| | ||||| ||||||||| ||||| | |||||||||| |||||||||||||| || Sbjct: 80659 acatatgggaatcctatatctttcttatt-cttcttccttctatctatcatccctccttt 80717 Query: 577 tatccacatccctttagttttgcttcacaacctanaatc 615 ||||||| |||||||||||||||||| | |||| |||| Sbjct: 80718 tatccactaccctttagttttgcttcatagcctagaatc 80756 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 2 aaagaagatctagaatatatcca 24 ||||||||||||||||||||||| Sbjct: 80157 aaagaagatctagaatatatcca 80179
>gb|M15176.1|MZECPPG Zea mays chloroplast Eco x DNA Length = 1368 Score = 272 bits (137), Expect = 1e-69 Identities = 271/309 (87%), Gaps = 9/309 (2%) Strand = Plus / Minus Query: 97 tttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaa 156 |||||| ||||||||||||| |||||||||||||||| ||||||| |||||||||||||| Sbjct: 346 tttttattcttattgaatcgtggtaaagtattctaatccaataaggatttcgcgggcgaa 287 Query: 157 tatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnn 216 ||||||||||||||||||||||||||||||||| || |||| ||||||| ||| Sbjct: 286 tatttactctttcctgtcttatttgttaatttagaaccttatcaaataaagcaa-ttttg 228 Query: 217 nggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatg 276 |||||| |||||||||| |||||||||||||||||||| ||||||| |||||||||| Sbjct: 227 tggtttg-tccgccatcc--accaatgaagtgttaggattc-tttcaat-aaatcctatg 173 Query: 277 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 336 | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||||| ||| Sbjct: 172 tagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgca 113 Query: 337 acggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcgg 396 | ||||||||| || ||| ||||||||| ||||||||||||||||||||||| ||| | Sbjct: 112 atggagcttcc--aatttttttttccgagtcaattttctcagttttattaaccc-ggctg 56 Query: 397 ctctttatt 405 ||||||||| Sbjct: 55 ctctttatt 47 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatcca 24 ||||||||||||||||||||||| Sbjct: 420 aaagaagatctagaatatatcca 398
>gb|AY847097.1| Chasmanthium curvifolium ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 982 Score = 270 bits (136), Expect = 5e-69 Identities = 210/237 (88%) Strand = Plus / Minus Query: 176 tatttgttaatttataaacttaccaaataagacaannnnnnnggtttgttccgccatccc 235 ||||||||||||||||| || ||||||||| ||| || ||||||||||||||| Sbjct: 660 tatttgttaatttataacctaaccaaataaagcaatttttttggcttgttccgccatccc 601 Query: 236 acccaatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgt 295 |||||||||||| |||||||||||||||||||||||||||| | ||||||||| | |||| Sbjct: 600 acccaatgaagtattaggattcttttcaataaaatcctatgcagtcataggttttctcgt 541 Query: 296 tcccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatt 355 |||||| |||||||||| |||||||||| ||||||| |||| ||||||||||||||||| Sbjct: 540 tcccacagcttctcctttcatggttaggtttgaatcctgcaatggagcttccaaaaaatt 481 Query: 356 tctttccgagttaattttctcagttttattaacccgggcggctctttattattgctt 412 ||||||||||| ||||||||||||||||||||||| ||| ||||||| ||||||||| Sbjct: 480 tctttccgagtcaattttctcagttttattaacccaggctgctcttttttattgctt 424 Score = 210 bits (106), Expect = 4e-51 Identities = 144/156 (92%), Gaps = 1/156 (0%) Strand = Plus / Minus Query: 461 ttttattatattgatgctttttcacattgccttttatgatgtaattcatagaccatacac 520 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 369 ttttattatattgatgctttatcacattgccttttatgatgtaattcatagaccatacac 310 Query: 521 agnggaattctatatcttatttatttcctcttccttctttctatcatccctccctttatc 580 | ||||| ||||||||| ||| ||| |||||||||| |||||||||||||| |||||| Sbjct: 309 attggaatcctatatctttctta-ttcttcttccttctatctatcatccctccttttatc 251 Query: 581 cacatccctttagttttgcttcacaacctanaatcc 616 | |||||||||||||||||||||||||||| ||||| Sbjct: 250 cccatccctttagttttgcttcacaacctagaatcc 215 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatcca 24 ||||||||||||||||||||||| Sbjct: 741 aaagaagatctagaatatatcca 719
>dbj|AP007101.1| Saccharum spontaneum chloroplast gene for ribosomal protein L16, partial cds, strain: SES205A, clone: SSE-79kb Length = 671 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Plus Query: 222 tgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatc 281 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || Sbjct: 1 tgttccgccatcccacccaatgaagtgttaggattctttccaataaaatcctatgtagtc 60 Query: 282 ataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacgga 341 ||||||| |||||||||||| |||||||||| ||||||||||| ||||||| |||| ||| Sbjct: 61 ataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgcaatgga 120 Query: 342 gcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctctt 401 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||| Sbjct: 121 gcttccaaaaaatttctttccgagtcaattttctcagttttattaaccc-ggctgctctt 179 Query: 402 ta-ttattgcttaaaatttgt 421 || ||||||||| | |||||| Sbjct: 180 tatttattgctttatatttgt 200 Score = 167 bits (84), Expect = 5e-38 Identities = 141/159 (88%), Gaps = 5/159 (3%) Strand = Plus / Plus Query: 461 ttttattatattgatgctttttcacattgcctttt----atgatgtaattcatagaccat 516 |||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| Sbjct: 260 ttttattatattgatgctttatcacattgccttttttttatgatgtaattcataaaccat 319 Query: 517 acacagnggaattctatatcttatttatttcctcttccttctttctatcatccctccctt 576 ||||| ||||| ||||||||| ||||| | |||||||||| |||||||||||||| || Sbjct: 320 acacatgggaatcctatatctttcttatt-cttcttccttctatctatcatccctccttt 378 Query: 577 tatccacatccctttagttttgcttcacaacctanaatc 615 |||||| |||||||||||||||||||||| |||| |||| Sbjct: 379 tatccagatccctttagttttgcttcacagcctagaatc 417
>dbj|AP007100.1| Saccharum spontaneum chloroplast gene for ribosomal protein L16, partial cds, strain: Jw385, clone: SJw-79kb Length = 672 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Plus Query: 222 tgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatc 281 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || Sbjct: 1 tgttccgccatcccacccaatgaagtgttaggattctttccaataaaatcctatgtagtc 60 Query: 282 ataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacgga 341 ||||||| |||||||||||| |||||||||| ||||||||||| ||||||| |||| ||| Sbjct: 61 ataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgcaatgga 120 Query: 342 gcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctctt 401 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||| Sbjct: 121 gcttccaaaaaatttctttccgagtcaattttctcagttttattaaccc-ggctgctctt 179 Query: 402 ta-ttattgcttaaaatttgt 421 || ||||||||| | |||||| Sbjct: 180 tatttattgctttatatttgt 200 Score = 167 bits (84), Expect = 5e-38 Identities = 141/159 (88%), Gaps = 5/159 (3%) Strand = Plus / Plus Query: 461 ttttattatattgatgctttttcacattgcctttt----atgatgtaattcatagaccat 516 |||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| Sbjct: 260 ttttattatattgatgctttatcacattgccttttttttatgatgtaattcataaaccat 319 Query: 517 acacagnggaattctatatcttatttatttcctcttccttctttctatcatccctccctt 576 ||||| ||||| ||||||||| ||||| | |||||||||| |||||||||||||| || Sbjct: 320 acacatgggaatcctatatctttcttatt-cttcttccttctatctatcatccctccttt 378 Query: 577 tatccacatccctttagttttgcttcacaacctanaatc 615 |||||| |||||||||||||||||||||| |||| |||| Sbjct: 379 tatccagatccctttagttttgcttcacagcctagaatc 417
>dbj|AP007099.1| Saccharum spontaneum chloroplast gene for ribosomal protein L16, partial cds, strain: Glagah, clone: SGl-79kb Length = 671 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Plus Query: 222 tgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatc 281 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || Sbjct: 1 tgttccgccatcccacccaatgaagtgttaggattctttccaataaaatcctatgtagtc 60 Query: 282 ataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacgga 341 ||||||| |||||||||||| |||||||||| ||||||||||| ||||||| |||| ||| Sbjct: 61 ataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgcaatgga 120 Query: 342 gcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctctt 401 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||| Sbjct: 121 gcttccaaaaaatttctttccgagtcaattttctcagttttattaaccc-ggctgctctt 179 Query: 402 ta-ttattgcttaaaatttgt 421 || ||||||||| | |||||| Sbjct: 180 tatttattgctttatatttgt 200 Score = 167 bits (84), Expect = 5e-38 Identities = 141/159 (88%), Gaps = 5/159 (3%) Strand = Plus / Plus Query: 461 ttttattatattgatgctttttcacattgcctttt----atgatgtaattcatagaccat 516 |||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| Sbjct: 260 ttttattatattgatgctttatcacattgccttttttttatgatgtaattcataaaccat 319 Query: 517 acacagnggaattctatatcttatttatttcctcttccttctttctatcatccctccctt 576 ||||| ||||| ||||||||| ||||| | |||||||||| |||||||||||||| || Sbjct: 320 acacatgggaatcctatatctttcttatt-cttcttccttctatctatcatccctccttt 378 Query: 577 tatccacatccctttagttttgcttcacaacctanaatc 615 |||||| |||||||||||||||||||||| |||| |||| Sbjct: 379 tatccagatccctttagttttgcttcacagcctagaatc 417
>dbj|AP007098.1| Saccharum edule chloroplast gene for ribosomal protein L16, partial cds, strain: COL/PAPUA N.G/TARC/E12, clone: EPN-79kb Length = 666 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Plus Query: 222 tgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatc 281 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || Sbjct: 1 tgttccgccatcccacccaatgaagtgttaggattctttccaataaaatcctatgtagtc 60 Query: 282 ataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacgga 341 ||||||| |||||||||||| |||||||||| ||||||||||| ||||||| |||| ||| Sbjct: 61 ataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgcaatgga 120 Query: 342 gcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctctt 401 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||| Sbjct: 121 gcttccaaaaaatttctttccgagtcaattttctcagttttattaaccc-ggctgctctt 179 Query: 402 ta-ttattgcttaaaatttgt 421 || ||||||||| | |||||| Sbjct: 180 tatttattgctttatatttgt 200 Score = 167 bits (84), Expect = 5e-38 Identities = 141/159 (88%), Gaps = 5/159 (3%) Strand = Plus / Plus Query: 461 ttttattatattgatgctttttcacattgcctttt----atgatgtaattcatagaccat 516 |||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| Sbjct: 255 ttttattatattgatgctttatcacattgccttttttttatgatgtaattcataaaccat 314 Query: 517 acacagnggaattctatatcttatttatttcctcttccttctttctatcatccctccctt 576 ||||| ||||| ||||||||| ||||| | |||||||||| |||||||||||||| || Sbjct: 315 acacatgggaatcctatatctttcttatt-cttcttccttctatctatcatccctccttt 373 Query: 577 tatccacatccctttagttttgcttcacaacctanaatc 615 |||||| |||||||||||||||||||||| |||| |||| Sbjct: 374 tatccagatccctttagttttgcttcacagcctagaatc 412
>dbj|AP007097.1| Saccharum edule chloroplast gene for ribosomal protein L16, partial cds, strain: IN95-009, clone: EIN-79kb Length = 666 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Plus Query: 222 tgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatc 281 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || Sbjct: 1 tgttccgccatcccacccaatgaagtgttaggattctttccaataaaatcctatgtagtc 60 Query: 282 ataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacgga 341 ||||||| |||||||||||| |||||||||| ||||||||||| ||||||| |||| ||| Sbjct: 61 ataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgcaatgga 120 Query: 342 gcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctctt 401 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||| Sbjct: 121 gcttccaaaaaatttctttccgagtcaattttctcagttttattaaccc-ggctgctctt 179 Query: 402 ta-ttattgcttaaaatttgt 421 || ||||||||| | |||||| Sbjct: 180 tatttattgctttatatttgt 200 Score = 167 bits (84), Expect = 5e-38 Identities = 141/159 (88%), Gaps = 5/159 (3%) Strand = Plus / Plus Query: 461 ttttattatattgatgctttttcacattgcctttt----atgatgtaattcatagaccat 516 |||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| Sbjct: 255 ttttattatattgatgctttatcacattgccttttttttatgatgtaattcataaaccat 314 Query: 517 acacagnggaattctatatcttatttatttcctcttccttctttctatcatccctccctt 576 ||||| ||||| ||||||||| ||||| | |||||||||| |||||||||||||| || Sbjct: 315 acacatgggaatcctatatctttcttatt-cttcttccttctatctatcatccctccttt 373 Query: 577 tatccacatccctttagttttgcttcacaacctanaatc 615 |||||| |||||||||||||||||||||| |||| |||| Sbjct: 374 tatccagatccctttagttttgcttcacagcctagaatc 412
>dbj|AP007096.1| Saccharum sinense chloroplast gene for ribosomal protein L16, partial cds, strain: Ooshima, clone: SiO-79kb Length = 666 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Plus Query: 222 tgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatc 281 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || Sbjct: 1 tgttccgccatcccacccaatgaagtgttaggattctttccaataaaatcctatgtagtc 60 Query: 282 ataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacgga 341 ||||||| |||||||||||| |||||||||| ||||||||||| ||||||| |||| ||| Sbjct: 61 ataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgcaatgga 120 Query: 342 gcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctctt 401 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||| Sbjct: 121 gcttccaaaaaatttctttccgagtcaattttctcagttttattaaccc-ggctgctctt 179 Query: 402 ta-ttattgcttaaaatttgt 421 || ||||||||| | |||||| Sbjct: 180 tatttattgctttatatttgt 200 Score = 167 bits (84), Expect = 5e-38 Identities = 141/159 (88%), Gaps = 5/159 (3%) Strand = Plus / Plus Query: 461 ttttattatattgatgctttttcacattgcctttt----atgatgtaattcatagaccat 516 |||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| Sbjct: 255 ttttattatattgatgctttatcacattgccttttttttatgatgtaattcataaaccat 314 Query: 517 acacagnggaattctatatcttatttatttcctcttccttctttctatcatccctccctt 576 ||||| ||||| ||||||||| ||||| | |||||||||| |||||||||||||| || Sbjct: 315 acacatgggaatcctatatctttcttatt-cttcttccttctatctatcatccctccttt 373 Query: 577 tatccacatccctttagttttgcttcacaacctanaatc 615 |||||| |||||||||||||||||||||| |||| |||| Sbjct: 374 tatccagatccctttagttttgcttcacagcctagaatc 412
>dbj|AP007095.1| Saccharum barberi chloroplast gene for ribosomal protein L16, partial cds, strain: Chunnee, clone: BCh-79kb Length = 666 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Plus Query: 222 tgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatc 281 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || Sbjct: 1 tgttccgccatcccacccaatgaagtgttaggattctttccaataaaatcctatgtagtc 60 Query: 282 ataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacgga 341 ||||||| |||||||||||| |||||||||| ||||||||||| ||||||| |||| ||| Sbjct: 61 ataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgcaatgga 120 Query: 342 gcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctctt 401 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||| Sbjct: 121 gcttccaaaaaatttctttccgagtcaattttctcagttttattaaccc-ggctgctctt 179 Query: 402 ta-ttattgcttaaaatttgt 421 || ||||||||| | |||||| Sbjct: 180 tatttattgctttatatttgt 200 Score = 167 bits (84), Expect = 5e-38 Identities = 141/159 (88%), Gaps = 5/159 (3%) Strand = Plus / Plus Query: 461 ttttattatattgatgctttttcacattgcctttt----atgatgtaattcatagaccat 516 |||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| Sbjct: 255 ttttattatattgatgctttatcacattgccttttttttatgatgtaattcataaaccat 314 Query: 517 acacagnggaattctatatcttatttatttcctcttccttctttctatcatccctccctt 576 ||||| ||||| ||||||||| ||||| | |||||||||| |||||||||||||| || Sbjct: 315 acacatgggaatcctatatctttcttatt-cttcttccttctatctatcatccctccttt 373 Query: 577 tatccacatccctttagttttgcttcacaacctanaatc 615 |||||| |||||||||||||||||||||| |||| |||| Sbjct: 374 tatccagatccctttagttttgcttcacagcctagaatc 412
>dbj|AP007094.1| Saccharum sinense chloroplast gene for ribosomal protein L16, partial cds, strain: Tekcha, clone: SiTe-79kb Length = 666 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Plus Query: 222 tgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatc 281 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || Sbjct: 1 tgttccgccatcccacccaatgaagtgttaggattctttccaataaaatcctatgtagtc 60 Query: 282 ataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacgga 341 ||||||| |||||||||||| |||||||||| ||||||||||| ||||||| |||| ||| Sbjct: 61 ataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgcaatgga 120 Query: 342 gcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctctt 401 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||| Sbjct: 121 gcttccaaaaaatttctttccgagtcaattttctcagttttattaaccc-ggctgctctt 179 Query: 402 ta-ttattgcttaaaatttgt 421 || ||||||||| | |||||| Sbjct: 180 tatttattgctttatatttgt 200 Score = 167 bits (84), Expect = 5e-38 Identities = 141/159 (88%), Gaps = 5/159 (3%) Strand = Plus / Plus Query: 461 ttttattatattgatgctttttcacattgcctttt----atgatgtaattcatagaccat 516 |||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| Sbjct: 255 ttttattatattgatgctttatcacattgccttttttttatgatgtaattcataaaccat 314 Query: 517 acacagnggaattctatatcttatttatttcctcttccttctttctatcatccctccctt 576 ||||| ||||| ||||||||| ||||| | |||||||||| |||||||||||||| || Sbjct: 315 acacatgggaatcctatatctttcttatt-cttcttccttctatctatcatccctccttt 373 Query: 577 tatccacatccctttagttttgcttcacaacctanaatc 615 |||||| |||||||||||||||||||||| |||| |||| Sbjct: 374 tatccagatccctttagttttgcttcacagcctagaatc 412
>dbj|AP007093.1| Saccharum barberi chloroplast gene for ribosomal protein L16, partial cds, strain: Kewali14, clone: BKe-79kb Length = 666 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Plus Query: 222 tgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatc 281 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || Sbjct: 1 tgttccgccatcccacccaatgaagtgttaggattctttccaataaaatcctatgtagtc 60 Query: 282 ataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacgga 341 ||||||| |||||||||||| |||||||||| ||||||||||| ||||||| |||| ||| Sbjct: 61 ataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgcaatgga 120 Query: 342 gcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctctt 401 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||| Sbjct: 121 gcttccaaaaaatttctttccgagtcaattttctcagttttattaaccc-ggctgctctt 179 Query: 402 ta-ttattgcttaaaatttgt 421 || ||||||||| | |||||| Sbjct: 180 tatttattgctttatatttgt 200 Score = 167 bits (84), Expect = 5e-38 Identities = 141/159 (88%), Gaps = 5/159 (3%) Strand = Plus / Plus Query: 461 ttttattatattgatgctttttcacattgcctttt----atgatgtaattcatagaccat 516 |||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| Sbjct: 255 ttttattatattgatgctttatcacattgccttttttttatgatgtaattcataaaccat 314 Query: 517 acacagnggaattctatatcttatttatttcctcttccttctttctatcatccctccctt 576 ||||| ||||| ||||||||| ||||| | |||||||||| |||||||||||||| || Sbjct: 315 acacatgggaatcctatatctttcttatt-cttcttccttctatctatcatccctccttt 373 Query: 577 tatccacatccctttagttttgcttcacaacctanaatc 615 |||||| |||||||||||||||||||||| |||| |||| Sbjct: 374 tatccagatccctttagttttgcttcacagcctagaatc 412
>dbj|AP007092.1| Saccharum robustum chloroplast gene for ribosomal protein L16, exon 2, partial sequence Length = 666 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Plus Query: 222 tgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatc 281 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || Sbjct: 1 tgttccgccatcccacccaatgaagtgttaggattctttccaataaaatcctatgtagtc 60 Query: 282 ataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacgga 341 ||||||| |||||||||||| |||||||||| ||||||||||| ||||||| |||| ||| Sbjct: 61 ataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgcaatgga 120 Query: 342 gcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctctt 401 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||| Sbjct: 121 gcttccaaaaaatttctttccgagtcaattttctcagttttattaaccc-ggctgctctt 179 Query: 402 ta-ttattgcttaaaatttgt 421 || ||||||||| | |||||| Sbjct: 180 tatttattgctttatatttgt 200 Score = 167 bits (84), Expect = 5e-38 Identities = 141/159 (88%), Gaps = 5/159 (3%) Strand = Plus / Plus Query: 461 ttttattatattgatgctttttcacattgcctttt----atgatgtaattcatagaccat 516 |||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| Sbjct: 255 ttttattatattgatgctttatcacattgccttttttttatgatgtaattcataaaccat 314 Query: 517 acacagnggaattctatatcttatttatttcctcttccttctttctatcatccctccctt 576 ||||| ||||| ||||||||| ||||| | |||||||||| |||||||||||||| || Sbjct: 315 acacatgggaatcctatatctttcttatt-cttcttccttctatctatcatccctccttt 373 Query: 577 tatccacatccctttagttttgcttcacaacctanaatc 615 |||||| |||||||||||||||||||||| |||| |||| Sbjct: 374 tatccagatccctttagttttgcttcacagcctagaatc 412
>dbj|AP007091.1| Saccharum robustum chloroplast gene for ribosomal protein L16, partial cds, strain: 6, clone: R6-79kb Length = 666 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Plus Query: 222 tgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatc 281 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || Sbjct: 1 tgttccgccatcccacccaatgaagtgttaggattctttccaataaaatcctatgtagtc 60 Query: 282 ataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacgga 341 ||||||| |||||||||||| |||||||||| ||||||||||| ||||||| |||| ||| Sbjct: 61 ataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgcaatgga 120 Query: 342 gcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctctt 401 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||| Sbjct: 121 gcttccaaaaaatttctttccgagtcaattttctcagttttattaaccc-ggctgctctt 179 Query: 402 ta-ttattgcttaaaatttgt 421 || ||||||||| | |||||| Sbjct: 180 tatttattgctttatatttgt 200 Score = 167 bits (84), Expect = 5e-38 Identities = 141/159 (88%), Gaps = 5/159 (3%) Strand = Plus / Plus Query: 461 ttttattatattgatgctttttcacattgcctttt----atgatgtaattcatagaccat 516 |||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| Sbjct: 255 ttttattatattgatgctttatcacattgccttttttttatgatgtaattcataaaccat 314 Query: 517 acacagnggaattctatatcttatttatttcctcttccttctttctatcatccctccctt 576 ||||| ||||| ||||||||| ||||| | |||||||||| |||||||||||||| || Sbjct: 315 acacatgggaatcctatatctttcttatt-cttcttccttctatctatcatccctccttt 373 Query: 577 tatccacatccctttagttttgcttcacaacctanaatc 615 |||||| |||||||||||||||||||||| |||| |||| Sbjct: 374 tatccagatccctttagttttgcttcacagcctagaatc 412
>dbj|AP007090.1| Saccharum officinarum chloroplast gene for ribosomal protein L16, partial cds, strain: Fiji40, clone: OFi-79kb Length = 665 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Plus Query: 222 tgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatc 281 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || Sbjct: 1 tgttccgccatcccacccaatgaagtgttaggattctttccaataaaatcctatgtagtc 60 Query: 282 ataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacgga 341 ||||||| |||||||||||| |||||||||| ||||||||||| ||||||| |||| ||| Sbjct: 61 ataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgcaatgga 120 Query: 342 gcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctctt 401 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||| Sbjct: 121 gcttccaaaaaatttctttccgagtcaattttctcagttttattaaccc-ggctgctctt 179 Query: 402 ta-ttattgcttaaaatttgt 421 || ||||||||| | |||||| Sbjct: 180 tatttattgctttatatttgt 200 Score = 167 bits (84), Expect = 5e-38 Identities = 141/159 (88%), Gaps = 5/159 (3%) Strand = Plus / Plus Query: 461 ttttattatattgatgctttttcacattgcctttt----atgatgtaattcatagaccat 516 |||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| Sbjct: 254 ttttattatattgatgctttatcacattgccttttttttatgatgtaattcataaaccat 313 Query: 517 acacagnggaattctatatcttatttatttcctcttccttctttctatcatccctccctt 576 ||||| ||||| ||||||||| ||||| | |||||||||| |||||||||||||| || Sbjct: 314 acacatgggaatcctatatctttcttatt-cttcttccttctatctatcatccctccttt 372 Query: 577 tatccacatccctttagttttgcttcacaacctanaatc 615 |||||| |||||||||||||||||||||| |||| |||| Sbjct: 373 tatccagatccctttagttttgcttcacagcctagaatc 411
>dbj|AP007089.1| Saccharum officinarum chloroplast gene for ribosomal protein L16, partial cds, strain: Badila, clone: OBa-79kb Length = 665 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Plus Query: 222 tgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatc 281 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || Sbjct: 1 tgttccgccatcccacccaatgaagtgttaggattctttccaataaaatcctatgtagtc 60 Query: 282 ataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacgga 341 ||||||| |||||||||||| |||||||||| ||||||||||| ||||||| |||| ||| Sbjct: 61 ataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgcaatgga 120 Query: 342 gcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctctt 401 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||| Sbjct: 121 gcttccaaaaaatttctttccgagtcaattttctcagttttattaaccc-ggctgctctt 179 Query: 402 ta-ttattgcttaaaatttgt 421 || ||||||||| | |||||| Sbjct: 180 tatttattgctttatatttgt 200 Score = 167 bits (84), Expect = 5e-38 Identities = 141/159 (88%), Gaps = 5/159 (3%) Strand = Plus / Plus Query: 461 ttttattatattgatgctttttcacattgcctttt----atgatgtaattcatagaccat 516 |||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| Sbjct: 254 ttttattatattgatgctttatcacattgccttttttttatgatgtaattcataaaccat 313 Query: 517 acacagnggaattctatatcttatttatttcctcttccttctttctatcatccctccctt 576 ||||| ||||| ||||||||| ||||| | |||||||||| |||||||||||||| || Sbjct: 314 acacatgggaatcctatatctttcttatt-cttcttccttctatctatcatccctccttt 372 Query: 577 tatccacatccctttagttttgcttcacaacctanaatc 615 |||||| |||||||||||||||||||||| |||| |||| Sbjct: 373 tatccagatccctttagttttgcttcacagcctagaatc 411
>ref|XM_450631.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2141 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Minus Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 277 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 156 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 97 Query: 278 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 337 | |||||||||||||||||||||| |||||||||| ||||||||||| | |||| | ||| Sbjct: 96 agtcataggttctgtcgttcccacggcttctcctttaatggttaggttttaatctcacaa 37 Query: 338 cggagcttccaaaaaatttctttccgagttaattt 372 |||||||||||||||||||||||| ||| ||||| Sbjct: 36 tggagcttccaaaaaatttctttccaagtcaattt 2 Score = 165 bits (83), Expect = 2e-37 Identities = 86/87 (98%) Strand = Plus / Minus Query: 98 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 157 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 263 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 204 Query: 158 atttactctttcctgtcttatttgtta 184 ||||||||||||||||||||||||||| Sbjct: 203 atttactctttcctgtcttatttgtta 177 Score = 54.0 bits (27), Expect = 6e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 2 aaagaagatctagaatatatccagtatgtgtgtggatatttatctaaattctatattta 60 ||||| ||||||||||||||| || |||||| || |||||||||| |||||||||||| Sbjct: 353 aaagaggatctagaatatatctag-atgtgtatgtttatttatctatattctatattta 296
>gb|AF276969.1| Spartina anglica ribosomal protein L16 (rpl16) gene, intron and partial cds; chloroplast gene for chloroplast product Length = 680 Score = 186 bits (94), Expect = 6e-44 Identities = 148/167 (88%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 105 cttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaatatttact 164 ||||||||||| ||||||||||||||| |||||| |||||||||||||||||||||| Sbjct: 206 cttattgaatcatagtaaagtattctaatccaataaagatttcgcgggcgaatatttact 147 Query: 165 ctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnnggtttgt 224 ||||| |||||||||||||||||||||| |||||||||||| ||| ||||||| Sbjct: 146 ctttcttgtcttatttgttaatttataaccttaccaaataaagcaatttttttggtttgt 87 Query: 225 tccgccatcccacccaatgaagtgttaggattcttttcaataaaatc 271 ||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 86 tccgccatccc-cccaatgaagtattaggattcttttcaataaaatc 41 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 87 aatatccttatttttactcttattgaatc 115 |||||||||||||||| ||||||||||| Sbjct: 272 aatatccttatttttaaccttattgaatc 244
>gb|AF276968.1| Spartina alterniflora ribosomal protein L16 (rpl16) gene, intron and partial cds; chloroplast gene for chloroplast product Length = 680 Score = 186 bits (94), Expect = 6e-44 Identities = 148/167 (88%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 105 cttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaatatttact 164 ||||||||||| ||||||||||||||| |||||| |||||||||||||||||||||| Sbjct: 206 cttattgaatcatagtaaagtattctaatccaataaagatttcgcgggcgaatatttact 147 Query: 165 ctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnnggtttgt 224 ||||| |||||||||||||||||||||| |||||||||||| ||| ||||||| Sbjct: 146 ctttcttgtcttatttgttaatttataaccttaccaaataaagcaatttttttggtttgt 87 Query: 225 tccgccatcccacccaatgaagtgttaggattcttttcaataaaatc 271 ||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 86 tccgccatccc-cccaatgaagtattaggattcttttcaataaaatc 41 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 87 aatatccttatttttactcttattgaatc 115 |||||||||||||||| ||||||||||| Sbjct: 272 aatatccttatttttaaccttattgaatc 244
>gb|AF133489.1|AF133489 Anomochloa marantoidea ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1222 Score = 184 bits (93), Expect = 2e-43 Identities = 152/169 (89%), Gaps = 2/169 (1%) Strand = Plus / Minus Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctatg 276 |||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||| Sbjct: 632 ggtttgttccgccatcccacccaatgaagtgttaggattcgttttcaaaagaatcctatg 573 Query: 277 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 336 | |||| ||||||||||||||||| |||||||| | |||||||||||||||| || ||| Sbjct: 572 cagtcatgggttctgtcgttcccacagcttctccattaatggttaggtctgaaccctgca 513 Query: 337 acggagcttccaa-aaaatttctttccgagttaattttctcagttttat 384 | ||||||||||| |||||| ||||||||| |||||||||||||||| Sbjct: 512 atggagcttccaaccaaatttatttccgagtccattttctcagttttat 464 Score = 123 bits (62), Expect = 7e-25 Identities = 130/152 (85%), Gaps = 1/152 (0%) Strand = Plus / Minus Query: 464 tattatattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagn 523 |||| ||| |||||||| ||||| ||||||||| ||||||||||||||||||||| | Sbjct: 403 tattctatggatgctttatcacactgccttttagaatgtaattcatagaccatacatatt 344 Query: 524 ggaattctatatcttatttatttcctcttccttctttctatcatccctccctttatccac 583 ||||| || || || ||||| ||| ||| ||||||||||||||||||| |||||| || Sbjct: 343 ggaatcctcgatttttcttatt-cctgttctttctttctatcatccctccatttatctac 285 Query: 584 atccctttagttttgcttcacaacctanaatc 615 ||||||||| ||||||||||||||||| |||| Sbjct: 284 atccctttatttttgcttcacaacctagaatc 253 Score = 65.9 bits (33), Expect = 1e-07 Identities = 79/93 (84%), Gaps = 1/93 (1%) Strand = Plus / Minus Query: 83 aaaaaatatccttatttttactcttattgaatcgcggtaaagtattctaattc-aataag 141 ||||||| || || |||||| |||||||||||| || |||||||| | | | ||||| Sbjct: 782 aaaaaatctctttctttttattcttattgaatcatgggaaagtattgttactataataaa 723 Query: 142 aatttcgcgggcgaatatttactctttcctgtc 174 |||||||||||||||||||||||||||||||| Sbjct: 722 gatttcgcgggcgaatatttactctttcctgtc 690
>gb|AF276970.1| Spartina maritima ribosomal protein L16 (rpl16) gene, intron and partial cds; chloroplast gene for chloroplast product Length = 656 Score = 180 bits (91), Expect = 4e-42 Identities = 136/152 (89%), Gaps = 1/152 (0%) Strand = Plus / Minus Query: 120 taaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatt 179 |||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||| Sbjct: 191 taaagtattctaatccaataaagatttcgcgggcgaatatttactctttcttgtcttatt 132 Query: 180 tgttaatttataaacttaccaaataagacaannnnnnnggtttgttccgccatcccaccc 239 ||||||||||||| |||||||||||| ||| |||||||||||||||||| ||| Sbjct: 131 tgttaatttataaccttaccaaataaagcaatttttttggtttgttccgccatccc-ccc 73 Query: 240 aatgaagtgttaggattcttttcaataaaatc 271 |||||||| ||||||||||||||||||||||| Sbjct: 72 aatgaagtattaggattcttttcaataaaatc 41 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 87 aatatccttatttttactcttattgaatc 115 |||||||||||||||| ||||||||||| Sbjct: 248 aatatccttatttttaaccttattgaatc 220
>emb|Y00375.1|CHZMRP16 Maize chloroplast rpl16 gene for ribosomal protein L16 exon 1 Length = 548 Score = 135 bits (68), Expect = 2e-28 Identities = 138/159 (86%), Gaps = 6/159 (3%) Strand = Plus / Minus Query: 461 ttttattatattgatgctttttcacattgcctttt----atgatgtaattcatagaccat 516 |||||||||||||||||||| |||||||||||||| |||||| |||||||||||||| Sbjct: 525 ttttattatattgatgctttatcacattgccttttttttatgatg-aattcatagaccat 467 Query: 517 acacagnggaattctatatcttatttatttcctcttccttctttctatcatccctccctt 576 ||| | ||||| ||||||||| ||||| | |||||||||| |||||||||||||| || Sbjct: 466 acatatgggaatcctatatctttcttatt-cttcttccttctatctatcatccctccttt 408 Query: 577 tatccacatccctttagttttgcttcacaacctanaatc 615 ||||||| |||||||||||||||||| | |||| |||| Sbjct: 407 tatccactaccctttagttttgcttcatagcctagaatc 369
>gb|AF446051.1|AF446051S1 Hordeum vulgare Rpl16 (rpl16) gene, exon 1; chloroplast gene for chloroplast product Length = 282 Score = 111 bits (56), Expect = 3e-21 Identities = 58/59 (98%) Strand = Plus / Minus Query: 560 tctatcatccctccctttatccacatccctttagttttgcttcacaacctanaatccca 618 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 282 tctatcatccctccctttatccacatccctttagttttgcttcacaacctagaatccca 224
>gb|AY855878.1| Musa textilis voucher NEU0001 (CIRAD) ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1033 Score = 101 bits (51), Expect = 3e-18 Identities = 162/194 (83%), Gaps = 5/194 (2%) Strand = Plus / Plus Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctatg 276 |||| ||||||||||||||||||||||| | || |||||| |||||| || ||||||||| Sbjct: 482 ggttcgttccgccatcccacccaatgaattattcggattcgttttcagtagaatcctatg 541 Query: 277 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 336 | ||| |||||| |||||||||| |||||||| | |||||||||||||||| | ||| Sbjct: 542 cagtcacaggttccgtcgttcccatagcttctccattaatggttaggtctgaactctgca 601 Query: 337 acggagcttccaa-aaaatttctttccgagttaattttctcag-ttttattaacccgggc 394 | |||||| |||| |||||| ||| ||||| ||| | || || |||||||||||| | Sbjct: 602 atggagctcccaacaaaattccttctcgagtcaatctccttagtttttattaaccc--ga 659 Query: 395 ggctctttattatt 408 |||||||||||||| Sbjct: 660 ggctctttattatt 673 Score = 97.6 bits (49), Expect = 4e-17 Identities = 119/140 (85%), Gaps = 2/140 (1%) Strand = Plus / Plus Query: 469 tattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagnggaat 528 |||||||||||| ||||||||||||| |||| ||||||||||||||||||| | ||||| Sbjct: 690 tattgatgctttatcacattgccttt-atgaggtaattcatagaccatacatattggaat 748 Query: 529 tctatatcttatttatttcctcttccttctttctatcatccctccctttatccacatccc 588 |||||| | ||||| | ||| |||||||||||||| ||| |||||||||||||| Sbjct: 749 catatatcattgatatttt-tgttctctctttctatcatccttccatttatccacatccc 807 Query: 589 tttagttttgcttcacaacc 608 |||| ||||| ||||||||| Sbjct: 808 tttatttttgtttcacaacc 827 Score = 48.1 bits (24), Expect = 0.035 Identities = 33/36 (91%) Strand = Plus / Plus Query: 144 tttcgcgggcgaatatttactctttcctgtcttatt 179 ||||||||||||||||| ||||||| |||| ||||| Sbjct: 402 tttcgcgggcgaatattgactctttactgttttatt 437
>gb|AY855877.1| Musa troglodytarum voucher NEU0388 (CIRAD) ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1032 Score = 101 bits (51), Expect = 3e-18 Identities = 162/194 (83%), Gaps = 5/194 (2%) Strand = Plus / Plus Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctatg 276 |||| ||||||||||||||||||||||| | || |||||| |||||| || ||||||||| Sbjct: 482 ggttcgttccgccatcccacccaatgaattattcggattcgttttcagtagaatcctatg 541 Query: 277 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 336 | ||| |||||| |||||||||| |||||||| | |||||||||||||||| | ||| Sbjct: 542 cagtcacaggttccgtcgttcccatagcttctccattaatggttaggtctgaactctgca 601 Query: 337 acggagcttccaa-aaaatttctttccgagttaattttctcag-ttttattaacccgggc 394 | |||||| |||| |||||| ||| ||||| ||| | || || |||||||||||| | Sbjct: 602 atggagctcccaacaaaattccttctcgagtcaatctccttagtttttattaaccc--ga 659 Query: 395 ggctctttattatt 408 |||||||||||||| Sbjct: 660 ggctctttattatt 673 Score = 97.6 bits (49), Expect = 4e-17 Identities = 119/140 (85%), Gaps = 2/140 (1%) Strand = Plus / Plus Query: 469 tattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagnggaat 528 |||||||||||| ||||||||||||| |||| ||||||||||||||||||| | ||||| Sbjct: 690 tattgatgctttatcacattgccttt-atgaggtaattcatagaccatacatattggaat 748 Query: 529 tctatatcttatttatttcctcttccttctttctatcatccctccctttatccacatccc 588 |||||| | ||||| | ||| |||||||||||||| ||| |||||||||||||| Sbjct: 749 catatatcattgatatttt-tgttctctctttctatcatccttccatttatccacatccc 807 Query: 589 tttagttttgcttcacaacc 608 |||| ||||| ||||||||| Sbjct: 808 tttatttttgtttcacaacc 827 Score = 48.1 bits (24), Expect = 0.035 Identities = 33/36 (91%) Strand = Plus / Plus Query: 144 tttcgcgggcgaatatttactctttcctgtcttatt 179 ||||||||||||||||| ||||||| |||| ||||| Sbjct: 402 tttcgcgggcgaatattgactctttactgttttatt 437
>gb|AY855876.1| Musa troglodytarum voucher NEU0385 (CIRAD) ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1032 Score = 101 bits (51), Expect = 3e-18 Identities = 162/194 (83%), Gaps = 5/194 (2%) Strand = Plus / Plus Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctatg 276 |||| ||||||||||||||||||||||| | || |||||| |||||| || ||||||||| Sbjct: 482 ggttcgttccgccatcccacccaatgaattattcggattcgttttcagtagaatcctatg 541 Query: 277 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 336 | ||| |||||| |||||||||| |||||||| | |||||||||||||||| | ||| Sbjct: 542 cagtcacaggttccgtcgttcccatagcttctccattaatggttaggtctgaactctgca 601 Query: 337 acggagcttccaa-aaaatttctttccgagttaattttctcag-ttttattaacccgggc 394 | |||||| |||| |||||| ||| ||||| ||| | || || |||||||||||| | Sbjct: 602 atggagctcccaacaaaattccttctcgagtcaatctccttagtttttattaaccc--ga 659 Query: 395 ggctctttattatt 408 |||||||||||||| Sbjct: 660 ggctctttattatt 673 Score = 97.6 bits (49), Expect = 4e-17 Identities = 119/140 (85%), Gaps = 2/140 (1%) Strand = Plus / Plus Query: 469 tattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagnggaat 528 |||||||||||| ||||||||||||| |||| ||||||||||||||||||| | ||||| Sbjct: 690 tattgatgctttatcacattgccttt-atgaggtaattcatagaccatacatattggaat 748 Query: 529 tctatatcttatttatttcctcttccttctttctatcatccctccctttatccacatccc 588 |||||| | ||||| | ||| |||||||||||||| ||| |||||||||||||| Sbjct: 749 catatatcattgatatttt-tgttctctctttctatcatccttccatttatccacatccc 807 Query: 589 tttagttttgcttcacaacc 608 |||| ||||| ||||||||| Sbjct: 808 tttatttttgtttcacaacc 827 Score = 48.1 bits (24), Expect = 0.035 Identities = 33/36 (91%) Strand = Plus / Plus Query: 144 tttcgcgggcgaatatttactctttcctgtcttatt 179 ||||||||||||||||| ||||||| |||| ||||| Sbjct: 402 tttcgcgggcgaatattgactctttactgttttatt 437
>gb|AY855875.1| Musa jackeyi voucher NEU0389 (CIRAD) ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1032 Score = 101 bits (51), Expect = 3e-18 Identities = 162/194 (83%), Gaps = 5/194 (2%) Strand = Plus / Plus Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctatg 276 |||| ||||||||||||||||||||||| | || |||||| |||||| || ||||||||| Sbjct: 482 ggttcgttccgccatcccacccaatgaattattcggattcgttttcagtagaatcctatg 541 Query: 277 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 336 | ||| |||||| |||||||||| |||||||| | |||||||||||||||| | ||| Sbjct: 542 cagtcacaggttccgtcgttcccatagcttctccattaatggttaggtctgaactctgca 601 Query: 337 acggagcttccaa-aaaatttctttccgagttaattttctcag-ttttattaacccgggc 394 | |||||| |||| |||||| ||| ||||| ||| | || || |||||||||||| | Sbjct: 602 atggagctcccaacaaaattccttctcgagtcaatctccttagtttttattaaccc--ga 659 Query: 395 ggctctttattatt 408 |||||||||||||| Sbjct: 660 ggctctttattatt 673 Score = 97.6 bits (49), Expect = 4e-17 Identities = 119/140 (85%), Gaps = 2/140 (1%) Strand = Plus / Plus Query: 469 tattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagnggaat 528 |||||||||||| ||||||||||||| |||| ||||||||||||||||||| | ||||| Sbjct: 690 tattgatgctttatcacattgccttt-atgaggtaattcatagaccatacatattggaat 748 Query: 529 tctatatcttatttatttcctcttccttctttctatcatccctccctttatccacatccc 588 |||||| | ||||| | ||| |||||||||||||| ||| |||||||||||||| Sbjct: 749 catatatcattgatatttt-tgttctctctttctatcatccttccatttatccacatccc 807 Query: 589 tttagttttgcttcacaacc 608 |||| ||||| ||||||||| Sbjct: 808 tttatttttgtttcacaacc 827 Score = 48.1 bits (24), Expect = 0.035 Identities = 33/36 (91%) Strand = Plus / Plus Query: 144 tttcgcgggcgaatatttactctttcctgtcttatt 179 ||||||||||||||||| ||||||| |||| ||||| Sbjct: 402 tttcgcgggcgaatattgactctttactgttttatt 437
>gb|AY855890.1| Musa x paradisiaca voucher ITC0116 ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1073 Score = 97.6 bits (49), Expect = 4e-17 Identities = 119/140 (85%), Gaps = 2/140 (1%) Strand = Plus / Plus Query: 469 tattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagnggaat 528 |||||||||||| ||||||||||||| |||| ||||||||||||||||||| | ||||| Sbjct: 677 tattgatgctttatcacattgccttt-atgaggtaattcatagaccatacatattggaat 735 Query: 529 tctatatcttatttatttcctcttccttctttctatcatccctccctttatccacatccc 588 |||||| | ||||| | ||| |||||||||||||| ||| |||||||||||||| Sbjct: 736 catatatcattgatatttt-tgttctctctttctatcatccttccatttatccacatccc 794 Query: 589 tttagttttgcttcacaacc 608 |||| ||||| ||||||||| Sbjct: 795 tttatttttgtttcacaacc 814 Score = 85.7 bits (43), Expect = 2e-13 Identities = 160/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Plus Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctatg 276 |||| ||||||||||||||||||||||| | || |||||| |||||| || ||| ||||| Sbjct: 460 ggttcgttccgccatcccacccaatgaattattcggattcgttttcagtagaattctatg 519 Query: 277 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 336 | ||| |||||| |||||||||| |||||||| | |||||||||| ||||| | ||| Sbjct: 520 cagtcacaggttccgtcgttcccatagcttctccgttaatggttaggcctgaactctgca 579 Query: 337 acggagcttccaa-aaaatttctttccgagttaattttctcag-ttttattaacccgggc 394 | |||||| |||| |||||| ||| ||||| ||| | || || |||||||||||| | Sbjct: 580 atggagctcccaacaaaattccttctcgagtcaatctccttagtttttattaaccc--ga 637 Query: 395 ggctctttattatt 408 |||||||||||||| Sbjct: 638 ggctctttattatt 651 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 144 tttcgcgggcgaatatttactctttcctgtcttatt 179 ||||||||||||||||||||||||| |||| ||||| Sbjct: 380 tttcgcgggcgaatatttactctttactgttttatt 415
>gb|AY855889.1| Musa x paradisiaca voucher TM128 ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1074 Score = 97.6 bits (49), Expect = 4e-17 Identities = 119/140 (85%), Gaps = 2/140 (1%) Strand = Plus / Plus Query: 469 tattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagnggaat 528 |||||||||||| ||||||||||||| |||| ||||||||||||||||||| | ||||| Sbjct: 677 tattgatgctttatcacattgccttt-atgaggtaattcatagaccatacatattggaat 735 Query: 529 tctatatcttatttatttcctcttccttctttctatcatccctccctttatccacatccc 588 |||||| | ||||| | ||| |||||||||||||| ||| |||||||||||||| Sbjct: 736 catatatcattgatatttt-tgttctctctttctatcatccttccatttatccacatccc 794 Query: 589 tttagttttgcttcacaacc 608 |||| ||||| ||||||||| Sbjct: 795 tttatttttgtttcacaacc 814 Score = 93.7 bits (47), Expect = 7e-16 Identities = 161/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Plus Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctatg 276 |||| ||||||||||||||||||||||| | || |||||| |||||| || ||||||||| Sbjct: 460 ggttcgttccgccatcccacccaatgaattattcggattcgttttcagtagaatcctatg 519 Query: 277 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 336 | ||| |||||| |||||||||| |||||||| | |||||||||| ||||| | ||| Sbjct: 520 cagtcacaggttccgtcgttcccatagcttctccgttaatggttaggcctgaactctgca 579 Query: 337 acggagcttccaa-aaaatttctttccgagttaattttctcag-ttttattaacccgggc 394 | |||||| |||| |||||| ||| ||||| ||| | || || |||||||||||| | Sbjct: 580 atggagctcccaacaaaattccttctcgagtcaatctccttagtttttattaaccc--ga 637 Query: 395 ggctctttattatt 408 |||||||||||||| Sbjct: 638 ggctctttattatt 651 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 144 tttcgcgggcgaatatttactctttcctgtcttatt 179 ||||||||||||||||||||||||| |||| ||||| Sbjct: 380 tttcgcgggcgaatatttactctttactgttttatt 415
>gb|AY855888.1| Musa x paradisiaca voucher ITC0677 ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1073 Score = 97.6 bits (49), Expect = 4e-17 Identities = 119/140 (85%), Gaps = 2/140 (1%) Strand = Plus / Plus Query: 469 tattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagnggaat 528 |||||||||||| ||||||||||||| |||| ||||||||||||||||||| | ||||| Sbjct: 677 tattgatgctttatcacattgccttt-atgaggtaattcatagaccatacatattggaat 735 Query: 529 tctatatcttatttatttcctcttccttctttctatcatccctccctttatccacatccc 588 |||||| | ||||| | ||| |||||||||||||| ||| |||||||||||||| Sbjct: 736 catatatcattgatatttt-tgttctctctttctatcatccttccatttatccacatccc 794 Query: 589 tttagttttgcttcacaacc 608 |||| ||||| ||||||||| Sbjct: 795 tttatttttgtttcacaacc 814 Score = 93.7 bits (47), Expect = 7e-16 Identities = 161/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Plus Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctatg 276 |||| ||||||||||||||||||||||| | || |||||| |||||| || ||||||||| Sbjct: 460 ggttcgttccgccatcccacccaatgaattattcggattcgttttcagtagaatcctatg 519 Query: 277 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 336 | ||| |||||| |||||||||| |||||||| | |||||||||| ||||| | ||| Sbjct: 520 cagtcacaggttccgtcgttcccatagcttctccgttaatggttaggcctgaactctgca 579 Query: 337 acggagcttccaa-aaaatttctttccgagttaattttctcag-ttttattaacccgggc 394 | |||||| |||| |||||| ||| ||||| ||| | || || |||||||||||| | Sbjct: 580 atggagctcccaacaaaattccttctcgagtcaatctccttagtttttattaaccc--ga 637 Query: 395 ggctctttattatt 408 |||||||||||||| Sbjct: 638 ggctctttattatt 651 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 144 tttcgcgggcgaatatttactctttcctgtcttatt 179 ||||||||||||||||||||||||| |||| ||||| Sbjct: 380 tttcgcgggcgaatatttactctttactgttttatt 415
>gb|AY855887.1| Musa x paradisiaca voucher TM110 (KU) ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1073 Score = 97.6 bits (49), Expect = 4e-17 Identities = 119/140 (85%), Gaps = 2/140 (1%) Strand = Plus / Plus Query: 469 tattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagnggaat 528 |||||||||||| ||||||||||||| |||| ||||||||||||||||||| | ||||| Sbjct: 677 tattgatgctttatcacattgccttt-atgaggtaattcatagaccatacatattggaat 735 Query: 529 tctatatcttatttatttcctcttccttctttctatcatccctccctttatccacatccc 588 |||||| | ||||| | ||| |||||||||||||| ||| |||||||||||||| Sbjct: 736 catatatcattgatatttt-tgttctctctttctatcatccttccatttatccacatccc 794 Query: 589 tttagttttgcttcacaacc 608 |||| ||||| ||||||||| Sbjct: 795 tttatttttgtttcacaacc 814 Score = 85.7 bits (43), Expect = 2e-13 Identities = 160/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Plus Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctatg 276 |||| ||||||||||||||||||||||| | || |||||| |||||| || ||| ||||| Sbjct: 460 ggttcgttccgccatcccacccaatgaattattcggattcgttttcagtagaattctatg 519 Query: 277 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 336 | ||| |||||| |||||||||| |||||||| | |||||||||| ||||| | ||| Sbjct: 520 cagtcacaggttccgtcgttcccatagcttctccgttaatggttaggcctgaactctgca 579 Query: 337 acggagcttccaa-aaaatttctttccgagttaattttctcag-ttttattaacccgggc 394 | |||||| |||| |||||| ||| ||||| ||| | || || |||||||||||| | Sbjct: 580 atggagctcccaacaaaattccttctcgagtcaatctccttagtttttattaaccc--ga 637 Query: 395 ggctctttattatt 408 |||||||||||||| Sbjct: 638 ggctctttattatt 651 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 144 tttcgcgggcgaatatttactctttcctgtcttatt 179 ||||||||||||||||||||||||| |||| ||||| Sbjct: 380 tttcgcgggcgaatatttactctttactgttttatt 415
>gb|AY855886.1| Musa x paradisiaca voucher ITC0983 ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1074 Score = 97.6 bits (49), Expect = 4e-17 Identities = 119/140 (85%), Gaps = 2/140 (1%) Strand = Plus / Plus Query: 469 tattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagnggaat 528 |||||||||||| ||||||||||||| |||| ||||||||||||||||||| | ||||| Sbjct: 677 tattgatgctttatcacattgccttt-atgaggtaattcatagaccatacatattggaat 735 Query: 529 tctatatcttatttatttcctcttccttctttctatcatccctccctttatccacatccc 588 |||||| | ||||| | ||| |||||||||||||| ||| |||||||||||||| Sbjct: 736 catatatcattgatatttt-tgttctctctttctatcatccttccatttatccacatccc 794 Query: 589 tttagttttgcttcacaacc 608 |||| ||||| ||||||||| Sbjct: 795 tttatttttgtttcacaacc 814 Score = 93.7 bits (47), Expect = 7e-16 Identities = 161/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Plus Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctatg 276 |||| ||||||||||||||||||||||| | || |||||| |||||| || ||||||||| Sbjct: 460 ggttcgttccgccatcccacccaatgaattattcggattcgttttcagtagaatcctatg 519 Query: 277 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 336 | ||| |||||| |||||||||| |||||||| | |||||||||| ||||| | ||| Sbjct: 520 cagtcacaggttccgtcgttcccatagcttctccgttaatggttaggcctgaactctgca 579 Query: 337 acggagcttccaa-aaaatttctttccgagttaattttctcag-ttttattaacccgggc 394 | |||||| |||| |||||| ||| ||||| ||| | || || |||||||||||| | Sbjct: 580 atggagctcccaacaaaattccttctcgagtcaatctccttagtttttattaaccc--ga 637 Query: 395 ggctctttattatt 408 |||||||||||||| Sbjct: 638 ggctctttattatt 651 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 144 tttcgcgggcgaatatttactctttcctgtcttatt 179 ||||||||||||||||||||||||| |||| ||||| Sbjct: 380 tttcgcgggcgaatatttactctttactgttttatt 415
>gb|AY855885.1| Musa x paradisiaca voucher TM139 ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1074 Score = 97.6 bits (49), Expect = 4e-17 Identities = 119/140 (85%), Gaps = 2/140 (1%) Strand = Plus / Plus Query: 469 tattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagnggaat 528 |||||||||||| ||||||||||||| |||| ||||||||||||||||||| | ||||| Sbjct: 677 tattgatgctttatcacattgccttt-atgaggtaattcatagaccatacatattggaat 735 Query: 529 tctatatcttatttatttcctcttccttctttctatcatccctccctttatccacatccc 588 |||||| | ||||| | ||| |||||||||||||| ||| |||||||||||||| Sbjct: 736 catatatcattgatatttt-tgttctctctttctatcatccttccatttatccacatccc 794 Query: 589 tttagttttgcttcacaacc 608 |||| ||||| ||||||||| Sbjct: 795 tttatttttgtttcacaacc 814 Score = 93.7 bits (47), Expect = 7e-16 Identities = 161/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Plus Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctatg 276 |||| ||||||||||||||||||||||| | || |||||| |||||| || ||||||||| Sbjct: 460 ggttcgttccgccatcccacccaatgaattattcggattcgttttcagtagaatcctatg 519 Query: 277 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 336 | ||| |||||| |||||||||| |||||||| | |||||||||| ||||| | ||| Sbjct: 520 cagtcacaggttccgtcgttcccatagcttctccgttaatggttaggcctgaactctgca 579 Query: 337 acggagcttccaa-aaaatttctttccgagttaattttctcag-ttttattaacccgggc 394 | |||||| |||| |||||| ||| ||||| ||| | || || |||||||||||| | Sbjct: 580 atggagctcccaacaaaattccttctcgagtcaatctccttagtttttattaaccc--ga 637 Query: 395 ggctctttattatt 408 |||||||||||||| Sbjct: 638 ggctctttattatt 651 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 144 tttcgcgggcgaatatttactctttcctgtcttatt 179 ||||||||||||||||||||||||| |||| ||||| Sbjct: 380 tttcgcgggcgaatatttactctttactgttttatt 415
>gb|AY855884.1| Musa acuminata voucher TM71 (QSG) ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1073 Score = 97.6 bits (49), Expect = 4e-17 Identities = 119/140 (85%), Gaps = 2/140 (1%) Strand = Plus / Plus Query: 469 tattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagnggaat 528 |||||||||||| ||||||||||||| |||| ||||||||||||||||||| | ||||| Sbjct: 677 tattgatgctttatcacattgccttt-atgaggtaattcatagaccatacatattggaat 735 Query: 529 tctatatcttatttatttcctcttccttctttctatcatccctccctttatccacatccc 588 |||||| | ||||| | ||| |||||||||||||| ||| |||||||||||||| Sbjct: 736 catatatcattgatatttt-tgttctctctttctatcatccttccatttatccacatccc 794 Query: 589 tttagttttgcttcacaacc 608 |||| ||||| ||||||||| Sbjct: 795 tttatttttgtttcacaacc 814 Score = 93.7 bits (47), Expect = 7e-16 Identities = 161/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Plus Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctatg 276 |||| ||||||||||||||||||||||| | || |||||| |||||| || ||||||||| Sbjct: 460 ggttcgttccgccatcccacccaatgaattattcggattcgttttcagtagaatcctatg 519 Query: 277 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 336 | ||| |||||| |||||||||| |||||||| | |||||||||| ||||| | ||| Sbjct: 520 cagtcacaggttccgtcgttcccatagcttctccgttaatggttaggcctgaactctgca 579 Query: 337 acggagcttccaa-aaaatttctttccgagttaattttctcag-ttttattaacccgggc 394 | |||||| |||| |||||| ||| ||||| ||| | || || |||||||||||| | Sbjct: 580 atggagctcccaacaaaattccttctcgagtcaatctccttagtttttattaaccc--ga 637 Query: 395 ggctctttattatt 408 |||||||||||||| Sbjct: 638 ggctctttattatt 651 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 144 tttcgcgggcgaatatttactctttcctgtcttatt 179 ||||||||||||||||||||||||| |||| ||||| Sbjct: 380 tttcgcgggcgaatatttactctttactgttttatt 415
>gb|AY855883.1| Musa acuminata subsp. siamea voucher TM051 ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1073 Score = 97.6 bits (49), Expect = 4e-17 Identities = 119/140 (85%), Gaps = 2/140 (1%) Strand = Plus / Plus Query: 469 tattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagnggaat 528 |||||||||||| ||||||||||||| |||| ||||||||||||||||||| | ||||| Sbjct: 677 tattgatgctttatcacattgccttt-atgaggtaattcatagaccatacatattggaat 735 Query: 529 tctatatcttatttatttcctcttccttctttctatcatccctccctttatccacatccc 588 |||||| | ||||| | ||| |||||||||||||| ||| |||||||||||||| Sbjct: 736 catatatcattgatatttt-tgttctctctttctatcatccttccatttatccacatccc 794 Query: 589 tttagttttgcttcacaacc 608 |||| ||||| ||||||||| Sbjct: 795 tttatttttgtttcacaacc 814 Score = 85.7 bits (43), Expect = 2e-13 Identities = 160/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Plus Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctatg 276 |||| ||||||||||||||||||||||| | || |||||| |||||| || |||| |||| Sbjct: 460 ggttcgttccgccatcccacccaatgaattattcggattcgttttcagtagaatcatatg 519 Query: 277 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 336 | ||| |||||| |||||||||| |||||||| | |||||||||| ||||| | ||| Sbjct: 520 cagtcacaggttccgtcgttcccatagcttctccgttaatggttaggcctgaactctgca 579 Query: 337 acggagcttccaa-aaaatttctttccgagttaattttctcag-ttttattaacccgggc 394 | |||||| |||| |||||| ||| ||||| ||| | || || |||||||||||| | Sbjct: 580 atggagctcccaacaaaattccttctcgagtcaatctccttagtttttattaaccc--ga 637 Query: 395 ggctctttattatt 408 |||||||||||||| Sbjct: 638 ggctctttattatt 651 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 144 tttcgcgggcgaatatttactctttcctgtcttatt 179 ||||||||||||||||||||||||| |||| ||||| Sbjct: 380 tttcgcgggcgaatatttactctttactgttttatt 415
>gb|AY855882.1| Musa acuminata subsp. siamea voucher TM91 (KU) ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1073 Score = 97.6 bits (49), Expect = 4e-17 Identities = 119/140 (85%), Gaps = 2/140 (1%) Strand = Plus / Plus Query: 469 tattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagnggaat 528 |||||||||||| ||||||||||||| |||| ||||||||||||||||||| | ||||| Sbjct: 677 tattgatgctttatcacattgccttt-atgaggtaattcatagaccatacatattggaat 735 Query: 529 tctatatcttatttatttcctcttccttctttctatcatccctccctttatccacatccc 588 |||||| | ||||| | ||| |||||||||||||| ||| |||||||||||||| Sbjct: 736 catatatcattgatatttt-tgttctctctttctatcatccttccatttatccacatccc 794 Query: 589 tttagttttgcttcacaacc 608 |||| ||||| ||||||||| Sbjct: 795 tttatttttgtttcacaacc 814 Score = 85.7 bits (43), Expect = 2e-13 Identities = 160/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Plus Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctatg 276 |||| ||||||||||||||||||||||| | || |||||| |||||| || ||| ||||| Sbjct: 460 ggttcgttccgccatcccacccaatgaattattcggattcgttttcagtagaattctatg 519 Query: 277 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 336 | ||| |||||| |||||||||| |||||||| | |||||||||| ||||| | ||| Sbjct: 520 cagtcacaggttccgtcgttcccatagcttctccgttaatggttaggcctgaactctgca 579 Query: 337 acggagcttccaa-aaaatttctttccgagttaattttctcag-ttttattaacccgggc 394 | |||||| |||| |||||| ||| ||||| ||| | || || |||||||||||| | Sbjct: 580 atggagctcccaacaaaattccttctcgagtcaatctccttagtttttattaaccc--ga 637 Query: 395 ggctctttattatt 408 |||||||||||||| Sbjct: 638 ggctctttattatt 651 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 144 tttcgcgggcgaatatttactctttcctgtcttatt 179 ||||||||||||||||||||||||| |||| ||||| Sbjct: 380 tttcgcgggcgaatatttactctttactgttttatt 415
>gb|AY855881.1| Musa banksii voucher ITC0254 (CIRAD) ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1073 Score = 97.6 bits (49), Expect = 4e-17 Identities = 119/140 (85%), Gaps = 2/140 (1%) Strand = Plus / Plus Query: 469 tattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagnggaat 528 |||||||||||| ||||||||||||| |||| ||||||||||||||||||| | ||||| Sbjct: 677 tattgatgctttatcacattgccttt-atgaggtaattcatagaccatacatattggaat 735 Query: 529 tctatatcttatttatttcctcttccttctttctatcatccctccctttatccacatccc 588 |||||| | ||||| | ||| |||||||||||||| ||| |||||||||||||| Sbjct: 736 catatatcattgatatttt-tgttctctctttctatcatccttccatttatccacatccc 794 Query: 589 tttagttttgcttcacaacc 608 |||| ||||| ||||||||| Sbjct: 795 tttatttttgtttcacaacc 814 Score = 93.7 bits (47), Expect = 7e-16 Identities = 161/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Plus Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctatg 276 |||| ||||||||||||||||||||||| | || |||||| |||||| || ||||||||| Sbjct: 460 ggttcgttccgccatcccacccaatgaattattcggattcgttttcagtagaatcctatg 519 Query: 277 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 336 | ||| |||||| |||||||||| |||||||| | |||||||||| ||||| | ||| Sbjct: 520 cagtcacaggttccgtcgttcccatagcttctccgttaatggttaggcctgaactctgca 579 Query: 337 acggagcttccaa-aaaatttctttccgagttaattttctcag-ttttattaacccgggc 394 | |||||| |||| |||||| ||| ||||| ||| | || || |||||||||||| | Sbjct: 580 atggagctcccaacaaaattccttctcgagtcaatctccttagtttttattaaccc--ga 637 Query: 395 ggctctttattatt 408 |||||||||||||| Sbjct: 638 ggctctttattatt 651 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 144 tttcgcgggcgaatatttactctttcctgtcttatt 179 ||||||||||||||||||||||||| |||| ||||| Sbjct: 380 tttcgcgggcgaatatttactctttactgttttatt 415
>gb|AY855880.1| Musa acuminata subsp. malaccensis voucher ITC0250 (CIRAD) ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1073 Score = 97.6 bits (49), Expect = 4e-17 Identities = 119/140 (85%), Gaps = 2/140 (1%) Strand = Plus / Plus Query: 469 tattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagnggaat 528 |||||||||||| ||||||||||||| |||| ||||||||||||||||||| | ||||| Sbjct: 677 tattgatgctttatcacattgccttt-atgaggtaattcatagaccatacatattggaat 735 Query: 529 tctatatcttatttatttcctcttccttctttctatcatccctccctttatccacatccc 588 |||||| | ||||| | ||| |||||||||||||| ||| |||||||||||||| Sbjct: 736 catatatcattgatatttt-tgttctctctttctatcatccttccatttatccacatccc 794 Query: 589 tttagttttgcttcacaacc 608 |||| ||||| ||||||||| Sbjct: 795 tttatttttgtttcacaacc 814 Score = 93.7 bits (47), Expect = 7e-16 Identities = 161/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Plus Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctatg 276 |||| ||||||||||||||||||||||| | || |||||| |||||| || ||||||||| Sbjct: 460 ggttcgttccgccatcccacccaatgaattattcggattcgttttcagtagaatcctatg 519 Query: 277 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 336 | ||| |||||| |||||||||| |||||||| | |||||||||| ||||| | ||| Sbjct: 520 cagtcacaggttccgtcgttcccatagcttctccgttaatggttaggcctgaactctgca 579 Query: 337 acggagcttccaa-aaaatttctttccgagttaattttctcag-ttttattaacccgggc 394 | |||||| |||| |||||| ||| ||||| ||| | || || |||||||||||| | Sbjct: 580 atggagctcccaacaaaattccttctcgagtcaatctccttagtttttattaaccc--ga 637 Query: 395 ggctctttattatt 408 |||||||||||||| Sbjct: 638 ggctctttattatt 651 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 144 tttcgcgggcgaatatttactctttcctgtcttatt 179 ||||||||||||||||||||||||| |||| ||||| Sbjct: 380 tttcgcgggcgaatatttactctttactgttttatt 415
>gb|AY855879.1| Musa acuminata subsp. malaccensis voucher TM68 ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1073 Score = 97.6 bits (49), Expect = 4e-17 Identities = 119/140 (85%), Gaps = 2/140 (1%) Strand = Plus / Plus Query: 469 tattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagnggaat 528 |||||||||||| ||||||||||||| |||| ||||||||||||||||||| | ||||| Sbjct: 677 tattgatgctttatcacattgccttt-atgaggtaattcatagaccatacatattggaat 735 Query: 529 tctatatcttatttatttcctcttccttctttctatcatccctccctttatccacatccc 588 |||||| | ||||| | ||| |||||||||||||| ||| |||||||||||||| Sbjct: 736 catatatcattgatatttt-tgttctctctttctatcatccttccatttatccacatccc 794 Query: 589 tttagttttgcttcacaacc 608 |||| ||||| ||||||||| Sbjct: 795 tttatttttgtttcacaacc 814 Score = 93.7 bits (47), Expect = 7e-16 Identities = 161/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Plus Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctatg 276 |||| ||||||||||||||||||||||| | || |||||| |||||| || ||||||||| Sbjct: 460 ggttcgttccgccatcccacccaatgaattattcggattcgttttcagtagaatcctatg 519 Query: 277 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 336 | ||| |||||| |||||||||| |||||||| | |||||||||| ||||| | ||| Sbjct: 520 cagtcacaggttccgtcgttcccatagcttctccgttaatggttaggcctgaactctgca 579 Query: 337 acggagcttccaa-aaaatttctttccgagttaattttctcag-ttttattaacccgggc 394 | |||||| |||| |||||| ||| ||||| ||| | || || |||||||||||| | Sbjct: 580 atggagctcccaacaaaattccttctcgagtcaatctccttagtttttattaaccc--ga 637 Query: 395 ggctctttattatt 408 |||||||||||||| Sbjct: 638 ggctctttattatt 651 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 144 tttcgcgggcgaatatttactctttcctgtcttatt 179 ||||||||||||||||||||||||| |||| ||||| Sbjct: 380 tttcgcgggcgaatatttactctttactgttttatt 415
>gb|AY500680.1| Physocarpus opulifolius voucher JSh1015 rpl16 gene, intron; chloroplast Length = 932 Score = 93.7 bits (47), Expect = 7e-16 Identities = 108/127 (85%), Gaps = 1/127 (0%) Strand = Plus / Minus Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctatg 276 |||| |||||||||||| |||||||||| ||||||||| ||||||||| |||| |||| Sbjct: 530 ggttcgttccgccatcctacccaatgaatcattaggattcgttttcaatagaatcttatg 471 Query: 277 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 336 | ||| |||||||||||||||||| |||||| | ||||||||||||||||| | || Sbjct: 470 cattcacaggttctgtcgttcccaccacttctcgattaatggttaggtctgaattctaca 411 Query: 337 acggagc 343 ||||||| Sbjct: 410 acggagc 404 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 145 ttcgcgggcgaatatttactctttc 169 ||||||||||||||||||||||||| Sbjct: 615 ttcgcgggcgaatatttactctttc 591
>gb|AY727405.1| Trillium ovatum rpL16 gene, intron; chloroplast Length = 988 Score = 93.7 bits (47), Expect = 7e-16 Identities = 108/127 (85%), Gaps = 1/127 (0%) Strand = Plus / Minus Query: 218 ggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctatg 276 |||| ||||||||||||||||||||||| ||||||||| ||||||||| |||||||| Sbjct: 561 ggttcgttccgccatcccacccaatgaatcattaggattcgttttcaatagaatcctata 502 Query: 277 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 336 ||||| |||||||||||||||| ||||| || | |||||||||| |||||| | ||| Sbjct: 501 caatcacgggttctgtcgttcccatagcttcgccattaatggttaggcctgaattctgca 442 Query: 337 acggagc 343 | ||||| Sbjct: 441 atggagc 435 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 472 tgatgctttttcacattgccttttatgatgtaattcatagaccataca 519 ||||||||| ||||| |||||||||||| | |||||||||||||||| Sbjct: 347 tgatgctttatcacactgccttttatgagatgattcatagaccataca 300 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 145 ttcgcgggcgaatatttactctttc 169 |||||||||||||||| |||||||| Sbjct: 649 ttcgcgggcgaatattgactctttc 625
>gb|DQ100233.1| Purshia tridentata voucher 20A ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 787 Score = 89.7 bits (45), Expect = 1e-14 Identities = 103/121 (85%), Gaps = 1/121 (0%) Strand = Plus / Minus Query: 224 ttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctatggaatca 282 ||||||||||| |||||||||| ||||||||| ||||||||| |||| |||| | ||| Sbjct: 511 ttccgccatcctacccaatgaatcattaggattcgttttcaatagaatcttatgcattca 452 Query: 283 taggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacggag 342 |||||||||||||||||| |||||| | ||||||||||||||||| | |||||||| Sbjct: 451 caggttctgtcgttcccaccacttctcgattaatggttaggtctgaattctacaacggag 392 Query: 343 c 343 | Sbjct: 391 c 391 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 145 ttcgcgggcgaatatttactctttc 169 ||||||||||||||||||||||||| Sbjct: 602 ttcgcgggcgaatatttactctttc 578 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9,200,281 Number of Sequences: 3902068 Number of extensions: 9200281 Number of successful extensions: 229186 Number of sequences better than 10.0: 2899 Number of HSP's better than 10.0 without gapping: 2871 Number of HSP's successfully gapped in prelim test: 31 Number of HSP's that attempted gapping in prelim test: 217502 Number of HSP's gapped (non-prelim): 9910 length of query: 626 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 603 effective length of database: 17,143,297,704 effective search space: 10337408515512 effective search space used: 10337408515512 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
